Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06619.t1 | XP_024635815.1 | 99.5 | 196 | 1 | 0 | 1 | 196 | 1 | 196 | 4.00E-93 | 351.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06619.t1 | A2RVS6 | 89.3 | 196 | 20 | 1 | 1 | 196 | 1 | 195 | 2.7e-85 | 316.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06619.t1 | G7J8Y2 | 99.5 | 196 | 1 | 0 | 1 | 196 | 108 | 303 | 2.9e-93 | 351.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051781 | MS.gene06619 | 0.814841 | 1.25E-51 | -1.69E-46 |
| MS.gene051787 | MS.gene06619 | 0.808 | 3.84E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06619.t1 | MTR_3g092580 | 97.455 | 275 | 1 | 2 | 1 | 271 | 108 | 380 | 0.0 | 518 |
| MS.gene06619.t1 | MTR_1g083400 | 59.410 | 271 | 97 | 2 | 1 | 270 | 32 | 290 | 8.91e-88 | 263 |
| MS.gene06619.t1 | MTR_8g058530 | 67.136 | 213 | 55 | 3 | 1 | 213 | 1 | 198 | 2.09e-87 | 262 |
| MS.gene06619.t1 | MTR_7g112760 | 61.538 | 234 | 73 | 2 | 1 | 234 | 1 | 217 | 1.52e-86 | 258 |
| MS.gene06619.t1 | MTR_7g112760 | 61.538 | 234 | 73 | 2 | 1 | 234 | 1 | 217 | 3.73e-86 | 259 |
| MS.gene06619.t1 | MTR_7g108810 | 67.136 | 213 | 55 | 3 | 1 | 213 | 102 | 299 | 1.52e-85 | 261 |
| MS.gene06619.t1 | MTR_1g088180 | 60.648 | 216 | 72 | 2 | 1 | 215 | 1 | 204 | 3.50e-80 | 249 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06619.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene06619.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene06619.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene06619.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene06619.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene06619.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene06619.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 2.01e-114 | 331 |
| MS.gene06619.t1 | AT1G02840 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 9.20e-87 | 261 |
| MS.gene06619.t1 | AT1G02840 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 2.78e-86 | 258 |
| MS.gene06619.t1 | AT1G02840 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 2.78e-86 | 258 |
| MS.gene06619.t1 | AT1G02840 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 2.78e-86 | 258 |
| MS.gene06619.t1 | AT1G02840 | 69.194 | 211 | 58 | 2 | 1 | 211 | 1 | 204 | 4.93e-86 | 258 |
| MS.gene06619.t1 | AT1G09140 | 63.507 | 211 | 60 | 2 | 1 | 211 | 1 | 194 | 5.05e-85 | 255 |
| MS.gene06619.t1 | AT1G09140 | 63.507 | 211 | 60 | 2 | 1 | 211 | 1 | 194 | 5.46e-85 | 254 |
| MS.gene06619.t1 | AT1G09140 | 57.143 | 245 | 82 | 2 | 1 | 245 | 1 | 222 | 4.29e-81 | 244 |
| MS.gene06619.t1 | AT4G02430 | 65.500 | 200 | 63 | 2 | 1 | 200 | 1 | 194 | 7.58e-78 | 237 |
| MS.gene06619.t1 | AT4G02430 | 65.500 | 200 | 63 | 2 | 1 | 200 | 1 | 194 | 1.57e-77 | 237 |
| MS.gene06619.t1 | AT4G02430 | 67.039 | 179 | 56 | 1 | 1 | 179 | 1 | 176 | 6.85e-71 | 216 |
| MS.gene06619.t1 | AT4G02430 | 62.286 | 175 | 60 | 2 | 26 | 200 | 24 | 192 | 5.71e-61 | 194 |
| MS.gene06619.t1 | AT3G61860 | 26.291 | 213 | 125 | 5 | 7 | 217 | 2 | 184 | 1.71e-12 | 66.2 |
| MS.gene06619.t1 | AT2G46610 | 29.444 | 180 | 94 | 6 | 7 | 184 | 2 | 150 | 1.53e-11 | 63.2 |
| MS.gene06619.t1 | AT2G37340 | 41.304 | 92 | 48 | 2 | 9 | 99 | 13 | 99 | 5.61e-11 | 62.0 |
Find 92 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTGATGGTTGTCGATTA+AGG | 0.211961 | 3.3:-77282761 | MS.gene06619:CDS |
| TTCATTCTGCAGTAGATCTT+TGG | 0.248661 | 3.3:-77280723 | MS.gene06619:intron |
| TTTCGGACTTCTGCTCCTGC+TGG | 0.293656 | 3.3:+77280840 | None:intergenic |
| GGTGGTGGTGGCGGCGGTGG+TGG | 0.302105 | 3.3:-77282610 | MS.gene06619:CDS |
| CGGCGGTGACGGTGCTGGTG+GGG | 0.314004 | 3.3:-77282578 | MS.gene06619:CDS |
| CTTGATTGGTGATGCTGATC+TGG | 0.325826 | 3.3:+77280658 | None:intergenic |
| TATGGTGGTGGTGGCGGCGG+TGG | 0.349227 | 3.3:-77282613 | MS.gene06619:CDS |
| GGCGGTGGTGGCAGAGGCGG+CGG | 0.350418 | 3.3:-77282598 | MS.gene06619:CDS |
| CTTTGATGGTTGTCGATTAA+GGG | 0.353926 | 3.3:-77282760 | MS.gene06619:intron |
| CTTGGGCGAGATCATATATT+CGG | 0.363557 | 3.3:-77281196 | MS.gene06619:CDS |
| GGTGGCGGCGGTGGTGGCAG+AGG | 0.366433 | 3.3:-77282604 | MS.gene06619:CDS |
| GCCGCAGCAGAAGCCCCAGC+AGG | 0.370082 | 3.3:-77280855 | MS.gene06619:CDS |
| GGCGGTGACGGTGCTGGTGG+GGG | 0.372949 | 3.3:-77282577 | MS.gene06619:CDS |
| AGATGCTGAAGATGCAATTC+GGG | 0.378655 | 3.3:-77282799 | MS.gene06619:CDS |
| TTCGGACTTCTGCTCCTGCT+GGG | 0.379407 | 3.3:+77280841 | None:intergenic |
| GAGATGCTGAAGATGCAATT+CGG | 0.381400 | 3.3:-77282800 | MS.gene06619:CDS |
| ATATACCTGGCAGGCTTGAT+TGG | 0.384601 | 3.3:+77280644 | None:intergenic |
| GGCGGCGGTGACGGTGCTGG+TGG | 0.397097 | 3.3:-77282580 | MS.gene06619:CDS |
| GGCAGAGGCGGCGGCGGTGA+CGG | 0.399302 | 3.3:-77282589 | MS.gene06619:CDS |
| TGCATCCTGGCAGGATTTGA+AGG | 0.403388 | 3.3:-77282047 | MS.gene06619:intron |
| GGGTATGGTGGTGGTGGCGG+CGG | 0.404796 | 3.3:-77282616 | MS.gene06619:CDS |
| GGCGGCGGTGGTGGCAGAGG+CGG | 0.408001 | 3.3:-77282601 | MS.gene06619:CDS |
| GCGGCGGTGACGGTGCTGGT+GGG | 0.412764 | 3.3:-77282579 | MS.gene06619:CDS |
| TGGTGATGCTGATCTGGATC+TGG | 0.412986 | 3.3:+77280664 | None:intergenic |
| ATGATGGCCCTCTGCCTCCA+TGG | 0.413987 | 3.3:+77282653 | None:intergenic |
| GGCTCCCATCTTCTGCATCC+TGG | 0.414505 | 3.3:-77282060 | MS.gene06619:CDS |
| TTAACAGTATGGCCGCATAA+TGG | 0.418415 | 3.3:-77282977 | MS.gene06619:intron |
| GAGCTTGCCCATGGAGGCAG+AGG | 0.428432 | 3.3:-77282661 | MS.gene06619:CDS |
| GCTGAACGCGATGGTGATCT+TGG | 0.431344 | 3.3:+77280539 | None:intergenic |
| CCCATCTTCTGCATCCTGGC+AGG | 0.433919 | 3.3:-77282056 | MS.gene06619:CDS |
| TTTACTACAGTTATTGTTCG+TGG | 0.437899 | 3.3:-77282082 | MS.gene06619:intron |
| CATAATGGAAATTGAATTGA+AGG | 0.441407 | 3.3:-77282962 | MS.gene06619:CDS |
| CGTGGGTATGGTGGTGGTGG+CGG | 0.441938 | 3.3:-77282619 | MS.gene06619:CDS |
| GGCGGCGGCGGTGACGGTGC+TGG | 0.443757 | 3.3:-77282583 | MS.gene06619:CDS |
| CGTGATGGTTACAACTTTGA+TGG | 0.445163 | 3.3:-77282774 | MS.gene06619:CDS |
| TGCTGATCTGGATCTGGATC+TGG | 0.447648 | 3.3:+77280670 | None:intergenic |
| GCAGGAGCAGAAGTCCGAAA+AGG | 0.447779 | 3.3:-77280837 | MS.gene06619:CDS |
| GGTGGTGGCAGAGGCGGCGG+CGG | 0.454844 | 3.3:-77282595 | MS.gene06619:CDS |
| TCCTGCCAGGATGCAGAAGA+TGG | 0.465406 | 3.3:+77282055 | None:intergenic |
| CACCGAGTTTAGAAATCCTT+GGG | 0.466660 | 3.3:-77281213 | MS.gene06619:CDS |
| CAGGAGCAGAAGTCCGAAAA+GGG | 0.468055 | 3.3:-77280836 | MS.gene06619:CDS |
| TCTCGCCATTCTGAATTTCG+AGG | 0.470913 | 3.3:-77282541 | MS.gene06619:intron |
| TTACTACAGTTATTGTTCGT+GGG | 0.475643 | 3.3:-77282081 | MS.gene06619:intron |
| ACACCGAGTTTAGAAATCCT+TGG | 0.480051 | 3.3:-77281214 | MS.gene06619:CDS |
| TGATGGCCCTCTGCCTCCAT+GGG | 0.481565 | 3.3:+77282654 | None:intergenic |
| CATCACCAATCAAGCCTGCC+AGG | 0.494990 | 3.3:-77280649 | MS.gene06619:intron |
| AGACGTGGGTATGGTGGTGG+TGG | 0.495715 | 3.3:-77282622 | MS.gene06619:CDS |
| TGATACCTTCAAATCCTGCC+AGG | 0.500259 | 3.3:+77282042 | None:intergenic |
| AGTATGAGAGCAGTCGTTCA+AGG | 0.508477 | 3.3:-77280879 | MS.gene06619:CDS |
| TCCTGCTGGGGCTTCTGCTG+CGG | 0.520416 | 3.3:+77280854 | None:intergenic |
| TCAAGTGACAGACGTGGGTA+TGG | 0.524129 | 3.3:-77282631 | MS.gene06619:CDS |
| AATTGAAGATCTGTTCTACA+AGG | 0.526628 | 3.3:-77283562 | MS.gene06619:intron |
| TTGCAGGTTCTGTCTGGTAG+CGG | 0.530230 | 3.3:-77280106 | MS.gene06619:intron |
| CAGGATCATATGCGAAAAGC+TGG | 0.535111 | 3.3:-77281940 | MS.gene06619:CDS |
| CTTTGGAGCGATCTGTGTCT+AGG | 0.537173 | 3.3:-77280706 | MS.gene06619:CDS |
| TCTGATTCTCTTATATCAGC+GGG | 0.538836 | 3.3:+77283585 | None:intergenic |
| TCGGACTTCTGCTCCTGCTG+GGG | 0.539897 | 3.3:+77280842 | None:intergenic |
| TTGTAGGTGGAGCTTGCCCA+TGG | 0.543564 | 3.3:-77282670 | MS.gene06619:intron |
| CGCCCAAGGATTTCTAAACT+CGG | 0.544119 | 3.3:+77281211 | None:intergenic |
| ATGTGTACCTTCACTGTCAC+GGG | 0.544426 | 3.3:+77281894 | None:intergenic |
| CCACGTCTGTCACTTGATGA+TGG | 0.546991 | 3.3:+77282637 | None:intergenic |
| AATAACTTTATATACCTGGC+AGG | 0.549603 | 3.3:+77280635 | None:intergenic |
| TCAATTCAATTTCCATTATG+CGG | 0.550277 | 3.3:+77282965 | None:intergenic |
| TTGGGCGAGATCATATATTC+GGG | 0.556218 | 3.3:-77281195 | MS.gene06619:intron |
| TTCTGATTCTCTTATATCAG+CGG | 0.559626 | 3.3:+77283584 | None:intergenic |
| CCTGCCAGGATGCAGAAGAT+GGG | 0.560354 | 3.3:+77282056 | None:intergenic |
| GATGCAATTCGGGGTCGTGA+TGG | 0.566481 | 3.3:-77282789 | MS.gene06619:CDS |
| GTCTCCACGATCACCACGCC+AGG | 0.568223 | 3.3:-77280516 | MS.gene06619:intron |
| ATTCTCTTATATCAGCGGGC+AGG | 0.571374 | 3.3:+77283589 | None:intergenic |
| GACAGACGTGGGTATGGTGG+TGG | 0.572890 | 3.3:-77282625 | MS.gene06619:CDS |
| GAAGTCCGAAAAGGGCCAGA+AGG | 0.575911 | 3.3:-77280828 | MS.gene06619:intron |
| AAACAATAACATGGAGGGCG+AGG | 0.577762 | 3.3:+77282934 | None:intergenic |
| AATACCTGGCGTGGTGATCG+TGG | 0.578656 | 3.3:+77280512 | None:intergenic |
| AATGTGTACCTTCACTGTCA+CGG | 0.584101 | 3.3:+77281893 | None:intergenic |
| AGCGATCTGTGTCTAGGTCA+CGG | 0.589459 | 3.3:-77280700 | MS.gene06619:CDS |
| CATAATTAGTGTAATCAACA+AGG | 0.593738 | 3.3:+77281366 | None:intergenic |
| CGAATATATGATCTCGCCCA+AGG | 0.595825 | 3.3:+77281197 | None:intergenic |
| ACCTCAACAAAACAATAACA+TGG | 0.614465 | 3.3:+77282925 | None:intergenic |
| GAAGTTTCCCGTGACAGTGA+AGG | 0.619160 | 3.3:-77281901 | MS.gene06619:intron |
| TCAGCTTTAAATACCTGGCG+TGG | 0.620343 | 3.3:+77280503 | None:intergenic |
| CAACAAAACAATAACATGGA+GGG | 0.622678 | 3.3:+77282929 | None:intergenic |
| AATGGCGAGAGACACCAAAA+CGG | 0.624683 | 3.3:+77282554 | None:intergenic |
| CAATAACATGGAGGGCGAGG+AGG | 0.631600 | 3.3:+77282937 | None:intergenic |
| AGCTTGCCCATGGAGGCAGA+GGG | 0.639574 | 3.3:-77282660 | MS.gene06619:CDS |
| ACACACCTCGAAATTCAGAA+TGG | 0.647364 | 3.3:+77282536 | None:intergenic |
| CCATCATCAAGTGACAGACG+TGG | 0.656324 | 3.3:-77282637 | MS.gene06619:CDS |
| TAGGTGGAGCTTGCCCATGG+AGG | 0.659359 | 3.3:-77282667 | MS.gene06619:CDS |
| CGTGGAGACGCTGAACGCGA+TGG | 0.676046 | 3.3:+77280530 | None:intergenic |
| AGTGACAGACGTGGGTATGG+TGG | 0.681415 | 3.3:-77282628 | MS.gene06619:CDS |
| TCAACAAAACAATAACATGG+AGG | 0.687199 | 3.3:+77282928 | None:intergenic |
| GATGCTGAAGATGCAATTCG+GGG | 0.704956 | 3.3:-77282798 | MS.gene06619:CDS |
| CATCATCAAGTGACAGACGT+GGG | 0.724844 | 3.3:-77282636 | MS.gene06619:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTATTAATATTTTTA+TGG | - | chr3.3:77282005-77282024 | MS.gene06619:intron | 0.0% |
| !! | GTTAAATCAATATATATTAA+AGG | - | chr3.3:77283328-77283347 | MS.gene06619:intron | 10.0% |
| !!! | ATTAAAAATTTTTGTCAAAA+AGG | - | chr3.3:77281373-77281392 | MS.gene06619:CDS | 10.0% |
| !!! | TTTAATTTTTGTTTAATTAC+TGG | - | chr3.3:77280370-77280389 | MS.gene06619:intron | 10.0% |
| !!! | TTTTTCATAATAATAAAGAA+TGG | - | chr3.3:77283277-77283296 | MS.gene06619:intron | 10.0% |
| !! | AAAATATGTTAGAAAACATA+TGG | + | chr3.3:77282468-77282487 | None:intergenic | 15.0% |
| !! | ATTAATTTAATACAAAACAG+AGG | + | chr3.3:77281990-77282009 | None:intergenic | 15.0% |
| !!! | CGTGATAATATTTTTTTTAA+TGG | - | chr3.3:77282617-77282636 | MS.gene06619:CDS | 15.0% |
| !!! | TGCATTTTTATTTTTCATTT+AGG | - | chr3.3:77281296-77281315 | MS.gene06619:intron | 15.0% |
| !!! | TTTCCTTATTTTTTTTTTAC+CGG | - | chr3.3:77283492-77283511 | MS.gene06619:intron | 15.0% |
| !! | AAAAAAAGACTAAGATACTA+TGG | + | chr3.3:77281622-77281641 | None:intergenic | 20.0% |
| !! | AAACCAAATATTAAAACTGT+AGG | + | chr3.3:77281769-77281788 | None:intergenic | 20.0% |
| !! | AAACGAATATCGTATAAATT+TGG | + | chr3.3:77282434-77282453 | None:intergenic | 20.0% |
| !! | AACAAATATGCAAAAGAAAT+AGG | + | chr3.3:77283557-77283576 | None:intergenic | 20.0% |
| !! | AACGAATATCGTATAAATTT+GGG | + | chr3.3:77282433-77282452 | None:intergenic | 20.0% |
| !! | ATAAGTATGTCTAAACTAAA+AGG | + | chr3.3:77282968-77282987 | None:intergenic | 20.0% |
| !! | ATGATAAACATGATATTAGT+CGG | + | chr3.3:77281340-77281359 | None:intergenic | 20.0% |
| !! | CAACAACATAAATATAGAAA+AGG | + | chr3.3:77281903-77281922 | None:intergenic | 20.0% |
| !! | GTATATAAAGTTATTAGACA+TGG | - | chr3.3:77283102-77283121 | MS.gene06619:intron | 20.0% |
| !! | TATAAATGTTATTACAGATC+TGG | + | chr3.3:77282563-77282582 | None:intergenic | 20.0% |
| !! | TCTATATTTATGTTGTTGTA+TGG | - | chr3.3:77281905-77281924 | MS.gene06619:CDS | 20.0% |
| !! | TTGTAACCAAATAAAAAACA+TGG | - | chr3.3:77281270-77281289 | MS.gene06619:intron | 20.0% |
| !!! | AATTAAAAGTATTATCTTGC+AGG | - | chr3.3:77282821-77282840 | MS.gene06619:intron | 20.0% |
| !!! | ATTAATATTTTTATGGCTTG+AGG | - | chr3.3:77282012-77282031 | MS.gene06619:intron | 20.0% |
| !!! | TAGTAATTTACACAAGTTTT+AGG | - | chr3.3:77283522-77283541 | MS.gene06619:intron | 20.0% |
| !!! | TATTTTCTTTTTCACAGATT+CGG | - | chr3.3:77282482-77282501 | MS.gene06619:intron | 20.0% |
| ! | AAAAAGATACATATGCTGAA+TGG | - | chr3.3:77281243-77281262 | MS.gene06619:intron | 25.0% |
| ! | AAAAATCCATATGCTTCATT+AGG | + | chr3.3:77283601-77283620 | None:intergenic | 25.0% |
| ! | ACAATTCAAGTGCATAAAAA+TGG | + | chr3.3:77283155-77283174 | None:intergenic | 25.0% |
| ! | CATAATTAGTGTAATCAACA+AGG | + | chr3.3:77282366-77282385 | None:intergenic | 25.0% |
| ! | CTTCAATAATTATTGCTGAT+TGG | + | chr3.3:77281561-77281580 | None:intergenic | 25.0% |
| ! | GCACAAAAATATAATGCAAA+AGG | + | chr3.3:77282283-77282302 | None:intergenic | 25.0% |
| ! | GTCTAATAACTTTATATACC+TGG | + | chr3.3:77283101-77283120 | None:intergenic | 25.0% |
| ! | GTTCCGGTAAAAAAAAAATA+AGG | + | chr3.3:77283498-77283517 | None:intergenic | 25.0% |
| ! | TAATCTAGTAGTGAGAAAAA+GGG | + | chr3.3:77280876-77280895 | None:intergenic | 25.0% |
| ! | TATCTTAAATGTAGCTTCAA+GGG | - | chr3.3:77280664-77280683 | MS.gene06619:CDS | 25.0% |
| ! | TATTCATTTATTGTCTGAGA+GGG | - | chr3.3:77282588-77282607 | MS.gene06619:CDS | 25.0% |
| ! | TCAATTCAATTTCCATTATG+CGG | + | chr3.3:77280767-77280786 | None:intergenic | 25.0% |
| ! | TGAATTGTTTATCCAATTAC+AGG | - | chr3.3:77283167-77283186 | MS.gene06619:intron | 25.0% |
| ! | TTATCTTAAATGTAGCTTCA+AGG | - | chr3.3:77280663-77280682 | MS.gene06619:CDS | 25.0% |
| ! | TTATTCATTTATTGTCTGAG+AGG | - | chr3.3:77282587-77282606 | MS.gene06619:CDS | 25.0% |
| !! | AGTAGGAACAATTGAAATTT+TGG | - | chr3.3:77283416-77283435 | MS.gene06619:intron | 25.0% |
| !! | CATAATGGAAATTGAATTGA+AGG | - | chr3.3:77280767-77280786 | MS.gene06619:intron | 25.0% |
| !! | CTACTAGATTACTTGTATTT+TGG | - | chr3.3:77280885-77280904 | MS.gene06619:CDS | 25.0% |
| !! | GGTATTTAAAGCTGATTATA+TGG | - | chr3.3:77283234-77283253 | MS.gene06619:intron | 25.0% |
| !!! | CAGTTTTAATATTTGGTTTC+AGG | - | chr3.3:77281770-77281789 | MS.gene06619:intron | 25.0% |
| !!! | GCAATTCCATGTTTTTTATT+TGG | + | chr3.3:77281279-77281298 | None:intergenic | 25.0% |
| !!! | TATAATCAGCTTTAAATACC+TGG | + | chr3.3:77283234-77283253 | None:intergenic | 25.0% |
| !!! | TATGGTTCAGAATTTTAATG+AGG | - | chr3.3:77283252-77283271 | MS.gene06619:intron | 25.0% |
| !!! | TCACCTACAGTTTTAATATT+TGG | - | chr3.3:77281763-77281782 | MS.gene06619:intron | 25.0% |
| !!! | TGTGTTTTGTTCAATTTGTT+TGG | - | chr3.3:77280248-77280267 | MS.gene06619:intron | 25.0% |
| !!! | TTTTCTTGTTTTCCATGTTA+TGG | - | chr3.3:77280204-77280223 | MS.gene06619:intron | 25.0% |
| AAACAAAGACACGACAAATA+AGG | + | chr3.3:77282704-77282723 | None:intergenic | 30.0% | |
| AAACATGAAGATAAGAGTCA+TGG | + | chr3.3:77281432-77281451 | None:intergenic | 30.0% | |
| AAATAGAGAAGTAGAAATGC+AGG | + | chr3.3:77280353-77280372 | None:intergenic | 30.0% | |
| AACAAAGACACGACAAATAA+GGG | + | chr3.3:77282703-77282722 | None:intergenic | 30.0% | |
| AATAACTTTATATACCTGGC+AGG | + | chr3.3:77283097-77283116 | None:intergenic | 30.0% | |
| AATTGAAGATCTGTTCTACA+AGG | - | chr3.3:77280167-77280186 | MS.gene06619:intron | 30.0% | |
| AATTGTGATTTCCATTTGAG+GGG | + | chr3.3:77282040-77282059 | None:intergenic | 30.0% | |
| ACCTCAACAAAACAATAACA+TGG | + | chr3.3:77280807-77280826 | None:intergenic | 30.0% | |
| AGGTCAACAGAAAAAATACA+TGG | + | chr3.3:77280557-77280576 | None:intergenic | 30.0% | |
| ATTCAAGTGCATAAAAATGG+TGG | + | chr3.3:77283152-77283171 | None:intergenic | 30.0% | |
| ATTTCACTGTTTGTATGAGA+AGG | - | chr3.3:77282777-77282796 | MS.gene06619:CDS | 30.0% | |
| CAACAAAACAATAACATGGA+GGG | + | chr3.3:77280803-77280822 | None:intergenic | 30.0% | |
| CAATTGTGATTTCCATTTGA+GGG | + | chr3.3:77282041-77282060 | None:intergenic | 30.0% | |
| CATGGAAAACAAGAAAAGTA+CGG | + | chr3.3:77280201-77280220 | None:intergenic | 30.0% | |
| CTGAAACAATTGAGAAGAAA+AGG | + | chr3.3:77282164-77282183 | None:intergenic | 30.0% | |
| CTGAATTCAATCATGTTTAC+TGG | + | chr3.3:77280432-77280451 | None:intergenic | 30.0% | |
| GTAATCTAGTAGTGAGAAAA+AGG | + | chr3.3:77280877-77280896 | None:intergenic | 30.0% | |
| GTTCCTACTTTCTGTAATAT+TGG | + | chr3.3:77283405-77283424 | None:intergenic | 30.0% | |
| TACAAAGCAGTTATTAAGTG+AGG | - | chr3.3:77283445-77283464 | MS.gene06619:intron | 30.0% | |
| TCAACAAAACAATAACATGG+AGG | + | chr3.3:77280804-77280823 | None:intergenic | 30.0% | |
| TCAATTGTGATTTCCATTTG+AGG | + | chr3.3:77282042-77282061 | None:intergenic | 30.0% | |
| TCACCTCAGAAAATAAAAGT+TGG | + | chr3.3:77281007-77281026 | None:intergenic | 30.0% | |
| TGTAAATTACTACTCTGTTC+CGG | + | chr3.3:77283514-77283533 | None:intergenic | 30.0% | |
| TTACTACAGTTATTGTTCGT+GGG | - | chr3.3:77281648-77281667 | MS.gene06619:intron | 30.0% | |
| TTCTGATTCTCTTATATCAG+CGG | + | chr3.3:77280148-77280167 | None:intergenic | 30.0% | |
| TTTACTACAGTTATTGTTCG+TGG | - | chr3.3:77281647-77281666 | MS.gene06619:intron | 30.0% | |
| TTTGTATGAGAAGGATTATC+TGG | - | chr3.3:77282786-77282805 | MS.gene06619:CDS | 30.0% | |
| ! | ATGGCTAACTTTCTATTTTC+TGG | - | chr3.3:77282249-77282268 | MS.gene06619:intron | 30.0% |
| ! | GTATTGTGACTTTCTGATTT+TGG | - | chr3.3:77282923-77282942 | MS.gene06619:intron | 30.0% |
| ! | TTATACGATATTCGTTTTGC+TGG | - | chr3.3:77282437-77282456 | MS.gene06619:intron | 30.0% |
| !! | TAGCTTTGTTATCTTGGATT+TGG | - | chr3.3:77280607-77280626 | MS.gene06619:intron | 30.0% |
| !! | TCCATGTTATTGTTTTGTTG+AGG | - | chr3.3:77280803-77280822 | MS.gene06619:intron | 30.0% |
| !! | TGATAACAGTTGATGAGAAA+AGG | - | chr3.3:77280453-77280472 | MS.gene06619:intron | 30.0% |
| !! | TTTGCTTAGCTTTGTTATCT+TGG | - | chr3.3:77280601-77280620 | MS.gene06619:intron | 30.0% |
| !!! | AGATTACTTGTATTTTGGCT+TGG | - | chr3.3:77280890-77280909 | MS.gene06619:intron | 30.0% |
| !!! | CAAGCTCTCATTTTAGTTTA+GGG | - | chr3.3:77282186-77282205 | MS.gene06619:intron | 30.0% |
| !!! | CTTTCTATTTTCTGGAGTAT+TGG | - | chr3.3:77282257-77282276 | MS.gene06619:intron | 30.0% |
| !!! | GCATATGGATTTTTTTTTGC+AGG | - | chr3.3:77283607-77283626 | MS.gene06619:CDS | 30.0% |
| !!! | GTTCCAACTTTTATTTTCTG+AGG | - | chr3.3:77281001-77281020 | MS.gene06619:intron | 30.0% |
| !!! | GTTTACTGGCTTTTACTAAT+CGG | + | chr3.3:77280418-77280437 | None:intergenic | 30.0% |
| AAGATAAGAGTCATGGACAA+TGG | + | chr3.3:77281425-77281444 | None:intergenic | 35.0% | |
| AAGTGAAAACATGATTGCGA+AGG | + | chr3.3:77283377-77283396 | None:intergenic | 35.0% | |
| ACAGAAAAAATACATGGCTG+TGG | + | chr3.3:77280551-77280570 | None:intergenic | 35.0% | |
| AGTTATTTACGCCACTCATA+TGG | + | chr3.3:77281953-77281972 | None:intergenic | 35.0% | |
| ATGAGTGGCGTAAATAACTT+GGG | - | chr3.3:77281954-77281973 | MS.gene06619:intron | 35.0% | |
| ATTAAGTGAGGATGAACATC+TGG | - | chr3.3:77283457-77283476 | MS.gene06619:intron | 35.0% | |
| ATTCAGTTCAAAACTCCCAA+CGG | + | chr3.3:77280312-77280331 | None:intergenic | 35.0% | |
| CAGAAAAAATACATGGCTGT+GGG | + | chr3.3:77280550-77280569 | None:intergenic | 35.0% | |
| CCATACTGTTAAGAGGATAA+TGG | + | chr3.3:77280744-77280763 | None:intergenic | 35.0% | |
| CCATTATCCTCTTAACAGTA+TGG | - | chr3.3:77280741-77280760 | MS.gene06619:intron | 35.0% | |
| CGAAGGTAAATGTCAAATAC+AGG | + | chr3.3:77283360-77283379 | None:intergenic | 35.0% | |
| GAGCCAATATTACAGAAAGT+AGG | - | chr3.3:77283399-77283418 | MS.gene06619:intron | 35.0% | |
| GATATTAGTCGGAGCTTAAT+GGG | + | chr3.3:77281329-77281348 | None:intergenic | 35.0% | |
| GCAAAAGTTTGTAAGATCTG+CGG | + | chr3.3:77282662-77282681 | None:intergenic | 35.0% | |
| TACAGTCCATTCAAAGGAAA+AGG | + | chr3.3:77280580-77280599 | None:intergenic | 35.0% | |
| TACTATATCCTCCTATTGTC+TGG | - | chr3.3:77280272-77280291 | MS.gene06619:intron | 35.0% | |
| TATGAGTGGCGTAAATAACT+TGG | - | chr3.3:77281953-77281972 | MS.gene06619:intron | 35.0% | |
| TCTCTTCTATACTTCTGTCT+TGG | - | chr3.3:77280838-77280857 | MS.gene06619:CDS | 35.0% | |
| TCTGATTCTCTTATATCAGC+GGG | + | chr3.3:77280147-77280166 | None:intergenic | 35.0% | |
| TGATATTAGTCGGAGCTTAA+TGG | + | chr3.3:77281330-77281349 | None:intergenic | 35.0% | |
| TTAAGTGAGGATGAACATCT+GGG | - | chr3.3:77283458-77283477 | MS.gene06619:intron | 35.0% | |
| TTCATTCTGCAGTAGATCTT+TGG | - | chr3.3:77283006-77283025 | MS.gene06619:intron | 35.0% | |
| ! | AAAGTATTATCTTGCAGGTG+AGG | - | chr3.3:77282826-77282845 | MS.gene06619:intron | 35.0% |
| ! | ACTTTGATGGTTGTCGATTA+AGG | - | chr3.3:77280968-77280987 | MS.gene06619:intron | 35.0% |
| ! | CTTTGATGGTTGTCGATTAA+GGG | - | chr3.3:77280969-77280988 | MS.gene06619:intron | 35.0% |
| ! | TATTTTCTGCTCCATATGAG+TGG | - | chr3.3:77281939-77281958 | MS.gene06619:CDS | 35.0% |
| ! | TCTGAGGTGAAAACTTTCTT+CGG | - | chr3.3:77281017-77281036 | MS.gene06619:intron | 35.0% |
| ! | TTTTCTCGCACAATCTATGT+TGG | - | chr3.3:77280114-77280133 | MS.gene06619:intron | 35.0% |
| ! | TTTTTCACAGATTCGGAAAC+TGG | - | chr3.3:77282489-77282508 | MS.gene06619:intron | 35.0% |
| !! | GTGAAGGTACACATTCATTT+TGG | - | chr3.3:77281844-77281863 | MS.gene06619:intron | 35.0% |
| !!! | ATACTGCTCTTTTTTGCTCA+GGG | - | chr3.3:77282332-77282351 | MS.gene06619:intron | 35.0% |
| !!! | CAGTTGATGAGAAAAGGTTT+TGG | - | chr3.3:77280459-77280478 | MS.gene06619:intron | 35.0% |
| !!! | GCAAGCTCTCATTTTAGTTT+AGG | - | chr3.3:77282185-77282204 | MS.gene06619:intron | 35.0% |
| !!! | TTTTTTTTGCAGGTTCTGTC+TGG | - | chr3.3:77283617-77283636 | MS.gene06619:CDS | 35.0% |
| AATAACCCTGTGGTATCAGA+TGG | - | chr3.3:77282230-77282249 | MS.gene06619:intron | 40.0% | |
| AATGTGTACCTTCACTGTCA+CGG | + | chr3.3:77281839-77281858 | None:intergenic | 40.0% | |
| ACAAGCGATGTCTACTAACA+TGG | + | chr3.3:77282125-77282144 | None:intergenic | 40.0% | |
| ACACACCTCGAAATTCAGAA+TGG | + | chr3.3:77281196-77281215 | None:intergenic | 40.0% | |
| ACACCGAGTTTAGAAATCCT+TGG | - | chr3.3:77282515-77282534 | MS.gene06619:intron | 40.0% | |
| ACCTACAACAAGAGCAGATT+AGG | + | chr3.3:77281047-77281066 | None:intergenic | 40.0% | |
| AGATGCTGAAGATGCAATTC+GGG | - | chr3.3:77280930-77280949 | MS.gene06619:intron | 40.0% | |
| AGCTTCAAGGGTCAATTTGT+GGG | - | chr3.3:77280676-77280695 | MS.gene06619:CDS | 40.0% | |
| AGTCCATTCAAAGGAAAAGG+AGG | + | chr3.3:77280577-77280596 | None:intergenic | 40.0% | |
| AGTTTAGGGACTAAGTCTGT+GGG | - | chr3.3:77282200-77282219 | MS.gene06619:intron | 40.0% | |
| ATGTCTACTAACATGGCCAT+TGG | + | chr3.3:77282118-77282137 | None:intergenic | 40.0% | |
| ATTTCGAGGTGTGTCTATTC+AGG | - | chr3.3:77281202-77281221 | MS.gene06619:CDS | 40.0% | |
| CAAGCGACAGCTATAACTAA+GGG | + | chr3.3:77280639-77280658 | None:intergenic | 40.0% | |
| CACCGAGTTTAGAAATCCTT+GGG | - | chr3.3:77282516-77282535 | MS.gene06619:intron | 40.0% | |
| CAGAAAGTCACAATACCTTC+TGG | + | chr3.3:77282919-77282938 | None:intergenic | 40.0% | |
| CGTGATGGTTACAACTTTGA+TGG | - | chr3.3:77280955-77280974 | MS.gene06619:intron | 40.0% | |
| CTAACGCAGTCATGTTTCAA+TGG | - | chr3.3:77280714-77280733 | MS.gene06619:CDS | 40.0% | |
| CTTGGGCGAGATCATATATT+CGG | - | chr3.3:77282533-77282552 | MS.gene06619:intron | 40.0% | |
| GAGATGCTGAAGATGCAATT+CGG | - | chr3.3:77280929-77280948 | MS.gene06619:intron | 40.0% | |
| GCAAAAAAGAGCAGTATGAG+TGG | + | chr3.3:77282329-77282348 | None:intergenic | 40.0% | |
| GCAAACTACAGTCCATTCAA+AGG | + | chr3.3:77280586-77280605 | None:intergenic | 40.0% | |
| GTTCGTCCTAATGAAGCATA+TGG | - | chr3.3:77283592-77283611 | MS.gene06619:CDS | 40.0% | |
| TAGCTTCAAGGGTCAATTTG+TGG | - | chr3.3:77280675-77280694 | MS.gene06619:CDS | 40.0% | |
| TAGTTTAGGGACTAAGTCTG+TGG | - | chr3.3:77282199-77282218 | MS.gene06619:intron | 40.0% | |
| TCAAGCGACAGCTATAACTA+AGG | + | chr3.3:77280640-77280659 | None:intergenic | 40.0% | |
| TTAACAGTATGGCCGCATAA+TGG | - | chr3.3:77280752-77280771 | MS.gene06619:intron | 40.0% | |
| TTGGGCGAGATCATATATTC+GGG | - | chr3.3:77282534-77282553 | MS.gene06619:intron | 40.0% | |
| TTTCGAGGTGTGTCTATTCA+GGG | - | chr3.3:77281203-77281222 | MS.gene06619:CDS | 40.0% | |
| ! | ACGATATTCGTTTTGCTGGA+AGG | - | chr3.3:77282441-77282460 | MS.gene06619:intron | 40.0% |
| ! | ATGGTTGTCGATTAAGGGTA+TGG | - | chr3.3:77280974-77280993 | MS.gene06619:intron | 40.0% |
| ! | CGATATTCGTTTTGCTGGAA+GGG | - | chr3.3:77282442-77282461 | MS.gene06619:intron | 40.0% |
| ! | TAATCTGCTCTTGTTGTAGG+TGG | - | chr3.3:77281046-77281065 | MS.gene06619:intron | 40.0% |
| ! | TGACCTCCTTTTCCTTTGAA+TGG | - | chr3.3:77280571-77280590 | MS.gene06619:intron | 40.0% |
| ! | TGGTTGTCGATTAAGGGTAT+GGG | - | chr3.3:77280975-77280994 | MS.gene06619:intron | 40.0% |
| ! | TGTCACTTGATGTTTGAGTG+CGG | - | chr3.3:77282750-77282769 | MS.gene06619:intron | 40.0% |
| !! | GAACTGAAAGCACCATAACA+TGG | + | chr3.3:77280219-77280238 | None:intergenic | 40.0% |
| !!! | CATACTGCTCTTTTTTGCTC+AGG | - | chr3.3:77282331-77282350 | MS.gene06619:intron | 40.0% |
| !!! | CTTTTTTGCTCAGGGACTTT+TGG | - | chr3.3:77282340-77282359 | MS.gene06619:intron | 40.0% |
| AAACAATAACATGGAGGGCG+AGG | + | chr3.3:77280798-77280817 | None:intergenic | 45.0% | |
| AATGGCGAGAGACACCAAAA+CGG | + | chr3.3:77281178-77281197 | None:intergenic | 45.0% | |
| AGTATGAGAGCAGTCGTTCA+AGG | - | chr3.3:77282850-77282869 | MS.gene06619:intron | 45.0% | |
| AGTTAGCCATCTGATACCAC+AGG | + | chr3.3:77282239-77282258 | None:intergenic | 45.0% | |
| ATATACCTGGCAGGCTTGAT+TGG | + | chr3.3:77283088-77283107 | None:intergenic | 45.0% | |
| ATGTGTACCTTCACTGTCAC+GGG | + | chr3.3:77281838-77281857 | None:intergenic | 45.0% | |
| ATTCTCTTATATCAGCGGGC+AGG | + | chr3.3:77280143-77280162 | None:intergenic | 45.0% | |
| CAAAACTCCCAACGGTGTAA+AGG | + | chr3.3:77280304-77280323 | None:intergenic | 45.0% | |
| CAGGATCATATGCGAAAAGC+TGG | - | chr3.3:77281789-77281808 | MS.gene06619:intron | 45.0% | |
| CATCATCAAGTGACAGACGT+GGG | - | chr3.3:77281093-77281112 | MS.gene06619:intron | 45.0% | |
| CGAATATATGATCTCGCCCA+AGG | + | chr3.3:77282535-77282554 | None:intergenic | 45.0% | |
| CGCCCAAGGATTTCTAAACT+CGG | + | chr3.3:77282521-77282540 | None:intergenic | 45.0% | |
| CTGATACCACAGGGTTATTC+TGG | + | chr3.3:77282229-77282248 | None:intergenic | 45.0% | |
| GATGCTGAAGATGCAATTCG+GGG | - | chr3.3:77280931-77280950 | MS.gene06619:intron | 45.0% | |
| GCTTCAAGGGTCAATTTGTG+GGG | - | chr3.3:77280677-77280696 | MS.gene06619:CDS | 45.0% | |
| GTCACTTGATGTTTGAGTGC+GGG | - | chr3.3:77282751-77282770 | MS.gene06619:intron | 45.0% | |
| GTTAGCCATCTGATACCACA+GGG | + | chr3.3:77282238-77282257 | None:intergenic | 45.0% | |
| GTTTAGGGACTAAGTCTGTG+GGG | - | chr3.3:77282201-77282220 | MS.gene06619:intron | 45.0% | |
| TATGCGGCCATACTGTTAAG+AGG | + | chr3.3:77280751-77280770 | None:intergenic | 45.0% | |
| TCTCGCCATTCTGAATTTCG+AGG | - | chr3.3:77281188-77281207 | MS.gene06619:intron | 45.0% | |
| TGATACCTTCAAATCCTGCC+AGG | + | chr3.3:77281690-77281709 | None:intergenic | 45.0% | |
| TGGTGATCTTGGCCTGTAAT+TGG | + | chr3.3:77283182-77283201 | None:intergenic | 45.0% | |
| ! | AAAGGTGGGTTCCAGACAAT+AGG | + | chr3.3:77280286-77280305 | None:intergenic | 45.0% |
| ! | CAATACCTTCTGGCCCTTTT+CGG | + | chr3.3:77282909-77282928 | None:intergenic | 45.0% |
| ! | GCCTAATCTGCTCTTGTTGT+AGG | - | chr3.3:77281043-77281062 | MS.gene06619:intron | 45.0% |
| !! | CTTGATTGGTGATGCTGATC+TGG | + | chr3.3:77283074-77283093 | None:intergenic | 45.0% |
| !! | TCAGCTTTAAATACCTGGCG+TGG | + | chr3.3:77283229-77283248 | None:intergenic | 45.0% |
| !!! | TTTAATATATATTGATTTAA+CGG | + | chr3.3:77283329-77283348 | None:intergenic | 5.0% |
| AACATGATCAGCCCCACAAC+TGG | - | chr3.3:77282074-77282093 | MS.gene06619:CDS | 50.0% | |
| AACTCCCAACGGTGTAAAGG+TGG | + | chr3.3:77280301-77280320 | None:intergenic | 50.0% | |
| AATGCCAGACTGACCAGTTG+TGG | + | chr3.3:77282090-77282109 | None:intergenic | 50.0% | |
| ACAACTGGTCAGTCTGGCAT+TGG | - | chr3.3:77282089-77282108 | MS.gene06619:intron | 50.0% | |
| ACTCCCAACGGTGTAAAGGT+GGG | + | chr3.3:77280300-77280319 | None:intergenic | 50.0% | |
| AGCGATCTGTGTCTAGGTCA+CGG | - | chr3.3:77283029-77283048 | MS.gene06619:intron | 50.0% | |
| ATGCCAGACTGACCAGTTGT+GGG | + | chr3.3:77282089-77282108 | None:intergenic | 50.0% | |
| CAGGAGCAGAAGTCCGAAAA+GGG | - | chr3.3:77282893-77282912 | MS.gene06619:intron | 50.0% | |
| CCATCATCAAGTGACAGACG+TGG | - | chr3.3:77281092-77281111 | MS.gene06619:intron | 50.0% | |
| GAACCCACCTTTACACCGTT+GGG | - | chr3.3:77280294-77280313 | MS.gene06619:intron | 50.0% | |
| GAAGTTTCCCGTGACAGTGA+AGG | - | chr3.3:77281828-77281847 | MS.gene06619:intron | 50.0% | |
| TCAAGTGACAGACGTGGGTA+TGG | - | chr3.3:77281098-77281117 | MS.gene06619:intron | 50.0% | |
| TGCATCCTGGCAGGATTTGA+AGG | - | chr3.3:77281682-77281701 | MS.gene06619:intron | 50.0% | |
| TGCTGATCTGGATCTGGATC+TGG | + | chr3.3:77283062-77283081 | None:intergenic | 50.0% | |
| TTGCAGGTTCTGTCTGGTAG+CGG | - | chr3.3:77283623-77283642 | MS.gene06619:CDS | 50.0% | |
| ! | CCACGTCTGTCACTTGATGA+TGG | + | chr3.3:77281095-77281114 | None:intergenic | 50.0% |
| ! | TGGTGATGCTGATCTGGATC+TGG | + | chr3.3:77283068-77283087 | None:intergenic | 50.0% |
| !! | AGTCTGGCATTGGTAGCCAA+TGG | - | chr3.3:77282099-77282118 | MS.gene06619:intron | 50.0% |
| !! | CTTTGGAGCGATCTGTGTCT+AGG | - | chr3.3:77283023-77283042 | MS.gene06619:intron | 50.0% |
| AATACCTGGCGTGGTGATCG+TGG | + | chr3.3:77283220-77283239 | None:intergenic | 55.0% | |
| AGTGACAGACGTGGGTATGG+TGG | - | chr3.3:77281101-77281120 | MS.gene06619:intron | 55.0% | |
| CAATAACATGGAGGGCGAGG+AGG | + | chr3.3:77280795-77280814 | None:intergenic | 55.0% | |
| CATCACCAATCAAGCCTGCC+AGG | - | chr3.3:77283080-77283099 | MS.gene06619:intron | 55.0% | |
| CCTGCCAGGATGCAGAAGAT+GGG | + | chr3.3:77281676-77281695 | None:intergenic | 55.0% | |
| GAAGTCCGAAAAGGGCCAGA+AGG | - | chr3.3:77282901-77282920 | MS.gene06619:intron | 55.0% | |
| GATGCAATTCGGGGTCGTGA+TGG | - | chr3.3:77280940-77280959 | MS.gene06619:intron | 55.0% | |
| GCAGGAGCAGAAGTCCGAAA+AGG | - | chr3.3:77282892-77282911 | MS.gene06619:intron | 55.0% | |
| GCTGAACGCGATGGTGATCT+TGG | + | chr3.3:77283193-77283212 | None:intergenic | 55.0% | |
| GGAACCCACCTTTACACCGT+TGG | - | chr3.3:77280293-77280312 | MS.gene06619:intron | 55.0% | |
| TCCTGCCAGGATGCAGAAGA+TGG | + | chr3.3:77281677-77281696 | None:intergenic | 55.0% | |
| TGCCAGACTGACCAGTTGTG+GGG | + | chr3.3:77282088-77282107 | None:intergenic | 55.0% | |
| TTCGGACTTCTGCTCCTGCT+GGG | + | chr3.3:77282891-77282910 | None:intergenic | 55.0% | |
| TTGTAGGTGGAGCTTGCCCA+TGG | - | chr3.3:77281059-77281078 | MS.gene06619:intron | 55.0% | |
| TTTCGGACTTCTGCTCCTGC+TGG | + | chr3.3:77282892-77282911 | None:intergenic | 55.0% | |
| ! | GGGGTACCAGAATAACCCTG+TGG | - | chr3.3:77282220-77282239 | MS.gene06619:intron | 55.0% |
| ! | GGTGGGTTCCAGACAATAGG+AGG | + | chr3.3:77280283-77280302 | None:intergenic | 55.0% |
| AGCCCCACAACTGGTCAGTC+TGG | - | chr3.3:77282083-77282102 | MS.gene06619:intron | 60.0% | |
| AGCTTGCCCATGGAGGCAGA+GGG | - | chr3.3:77281069-77281088 | MS.gene06619:intron | 60.0% | |
| ATGATGGCCCTCTGCCTCCA+TGG | + | chr3.3:77281079-77281098 | None:intergenic | 60.0% | |
| CCCATCTTCTGCATCCTGGC+AGG | - | chr3.3:77281673-77281692 | MS.gene06619:intron | 60.0% | |
| GACAGACGTGGGTATGGTGG+TGG | - | chr3.3:77281104-77281123 | MS.gene06619:intron | 60.0% | |
| GGCTCCCATCTTCTGCATCC+TGG | - | chr3.3:77281669-77281688 | MS.gene06619:intron | 60.0% | |
| GGCTTGAGGCTCCCCTCAAA+TGG | - | chr3.3:77282026-77282045 | MS.gene06619:intron | 60.0% | |
| TAGGTGGAGCTTGCCCATGG+AGG | - | chr3.3:77281062-77281081 | MS.gene06619:intron | 60.0% | |
| TCGGACTTCTGCTCCTGCTG+GGG | + | chr3.3:77282890-77282909 | None:intergenic | 60.0% | |
| TGATGGCCCTCTGCCTCCAT+GGG | + | chr3.3:77281078-77281097 | None:intergenic | 60.0% | |
| !! | AGACGTGGGTATGGTGGTGG+TGG | - | chr3.3:77281107-77281126 | MS.gene06619:intron | 60.0% |
| CGTGGAGACGCTGAACGCGA+TGG | + | chr3.3:77283202-77283221 | None:intergenic | 65.0% | |
| GAGCTTGCCCATGGAGGCAG+AGG | - | chr3.3:77281068-77281087 | MS.gene06619:intron | 65.0% | |
| GTCTCCACGATCACCACGCC+AGG | - | chr3.3:77283213-77283232 | MS.gene06619:intron | 65.0% | |
| TCCTGCTGGGGCTTCTGCTG+CGG | + | chr3.3:77282878-77282897 | None:intergenic | 65.0% | |
| !! | CGTGGGTATGGTGGTGGTGG+CGG | - | chr3.3:77281110-77281129 | MS.gene06619:intron | 65.0% |
| !! | GGGTATGGTGGTGGTGGCGG+CGG | - | chr3.3:77281113-77281132 | MS.gene06619:intron | 70.0% |
| !! | TATGGTGGTGGTGGCGGCGG+TGG | - | chr3.3:77281116-77281135 | MS.gene06619:intron | 70.0% |
| !!! | GGTGCTGGTGGGGGCCGTTT+TGG | - | chr3.3:77281161-77281180 | MS.gene06619:intron | 70.0% |
| GCCGCAGCAGAAGCCCCAGC+AGG | - | chr3.3:77282874-77282893 | MS.gene06619:intron | 75.0% | |
| !! | CGGCGGTGACGGTGCTGGTG+GGG | - | chr3.3:77281151-77281170 | MS.gene06619:intron | 75.0% |
| !! | GCGGCGGTGACGGTGCTGGT+GGG | - | chr3.3:77281150-77281169 | MS.gene06619:intron | 75.0% |
| !! | GGCGGTGACGGTGCTGGTGG+GGG | - | chr3.3:77281152-77281171 | MS.gene06619:intron | 75.0% |
| ! | GGCAGAGGCGGCGGCGGTGA+CGG | - | chr3.3:77281140-77281159 | MS.gene06619:intron | 80.0% |
| !! | GGCGGCGGTGACGGTGCTGG+TGG | - | chr3.3:77281149-77281168 | MS.gene06619:intron | 80.0% |
| !! | GGCGGCGGTGGTGGCAGAGG+CGG | - | chr3.3:77281128-77281147 | MS.gene06619:intron | 80.0% |
| !! | GGCGGTGGTGGCAGAGGCGG+CGG | - | chr3.3:77281131-77281150 | MS.gene06619:intron | 80.0% |
| !! | GGTGGCGGCGGTGGTGGCAG+AGG | - | chr3.3:77281125-77281144 | MS.gene06619:intron | 80.0% |
| !! | GGTGGTGGCAGAGGCGGCGG+CGG | - | chr3.3:77281134-77281153 | MS.gene06619:intron | 80.0% |
| !!! | GGTGGTGGTGGCGGCGGTGG+TGG | - | chr3.3:77281119-77281138 | MS.gene06619:intron | 80.0% |
| !! | GGCGGCGGCGGTGACGGTGC+TGG | - | chr3.3:77281146-77281165 | MS.gene06619:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 77280102 | 77283649 | 77280102 | ID=MS.gene06619 |
| chr3.3 | mRNA | 77280102 | 77283649 | 77280102 | ID=MS.gene06619.t1;Parent=MS.gene06619 |
| chr3.3 | exon | 77283563 | 77283649 | 77283563 | ID=MS.gene06619.t1.exon1;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77283563 | 77283649 | 77283563 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| chr3.3 | exon | 77282927 | 77282992 | 77282927 | ID=MS.gene06619.t1.exon2;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77282927 | 77282992 | 77282927 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| chr3.3 | exon | 77282761 | 77282835 | 77282761 | ID=MS.gene06619.t1.exon3;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77282761 | 77282835 | 77282761 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| chr3.3 | exon | 77282542 | 77282686 | 77282542 | ID=MS.gene06619.t1.exon4;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77282542 | 77282686 | 77282542 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| chr3.3 | exon | 77282048 | 77282094 | 77282048 | ID=MS.gene06619.t1.exon5;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77282048 | 77282094 | 77282048 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| chr3.3 | exon | 77281902 | 77281959 | 77281902 | ID=MS.gene06619.t1.exon6;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77281902 | 77281959 | 77281902 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| chr3.3 | exon | 77281349 | 77281398 | 77281349 | ID=MS.gene06619.t1.exon7;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77281349 | 77281398 | 77281349 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| chr3.3 | exon | 77281196 | 77281252 | 77281196 | ID=MS.gene06619.t1.exon8;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77281196 | 77281252 | 77281196 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| chr3.3 | exon | 77280829 | 77280908 | 77280829 | ID=MS.gene06619.t1.exon9;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77280829 | 77280908 | 77280829 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| chr3.3 | exon | 77280650 | 77280733 | 77280650 | ID=MS.gene06619.t1.exon10;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77280650 | 77280733 | 77280650 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| chr3.3 | exon | 77280517 | 77280562 | 77280517 | ID=MS.gene06619.t1.exon11;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77280517 | 77280562 | 77280517 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| chr3.3 | exon | 77280102 | 77280122 | 77280102 | ID=MS.gene06619.t1.exon12;Parent=MS.gene06619.t1 |
| chr3.3 | CDS | 77280102 | 77280122 | 77280102 | ID=cds.MS.gene06619.t1;Parent=MS.gene06619.t1 |
| Gene Sequence |
| Protein sequence |
