Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066242.t1 | RHN81724.1 | 97 | 297 | 9 | 0 | 1 | 297 | 1 | 297 | 8.50E-169 | 602.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066242.t1 | P23472 | 67.7 | 300 | 93 | 3 | 1 | 297 | 1 | 299 | 3.6e-120 | 432.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066242.t1 | G7IDV3 | 97.0 | 297 | 9 | 0 | 1 | 297 | 1 | 297 | 6.1e-169 | 602.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051946 | MS.gene066242 | 0.820452 | 6.81E-53 | -1.69E-46 |
| MS.gene058157 | MS.gene066242 | -0.823956 | 1.05E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene066242 | 0.810022 | 1.42E-50 | -1.69E-46 |
| MS.gene058173 | MS.gene066242 | 0.808113 | 3.63E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene066242 | 0.807624 | 4.62E-50 | -1.69E-46 |
| MS.gene060187 | MS.gene066242 | 0.809269 | 2.06E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066242.t1 | MTR_1g099320 | 96.970 | 297 | 9 | 0 | 1 | 297 | 1 | 297 | 0.0 | 591 |
| MS.gene066242.t1 | MTR_1g099350 | 71.141 | 298 | 78 | 4 | 1 | 297 | 1 | 291 | 1.15e-149 | 421 |
| MS.gene066242.t1 | MTR_0027s0260 | 67.007 | 294 | 91 | 4 | 5 | 297 | 10 | 298 | 1.78e-139 | 395 |
| MS.gene066242.t1 | MTR_8g055940 | 67.586 | 290 | 87 | 4 | 5 | 293 | 10 | 293 | 6.70e-137 | 389 |
| MS.gene066242.t1 | MTR_1g099310 | 65.333 | 300 | 97 | 7 | 1 | 297 | 1 | 296 | 1.17e-135 | 386 |
| MS.gene066242.t1 | MTR_5g043550 | 63.605 | 294 | 102 | 3 | 1 | 293 | 1 | 290 | 7.31e-132 | 376 |
| MS.gene066242.t1 | MTR_1g099290 | 63.194 | 288 | 100 | 6 | 11 | 295 | 12 | 296 | 1.19e-123 | 365 |
| MS.gene066242.t1 | MTR_7g116350 | 61.644 | 292 | 96 | 2 | 7 | 297 | 8 | 284 | 4.43e-123 | 371 |
| MS.gene066242.t1 | MTR_8g467650 | 61.938 | 289 | 106 | 3 | 7 | 293 | 8 | 294 | 3.74e-122 | 352 |
| MS.gene066242.t1 | MTR_2g102020 | 55.732 | 314 | 121 | 5 | 1 | 297 | 1 | 313 | 5.24e-120 | 348 |
| MS.gene066242.t1 | MTR_7g116850 | 55.892 | 297 | 125 | 5 | 5 | 297 | 32 | 326 | 7.89e-113 | 329 |
| MS.gene066242.t1 | MTR_2g040740 | 55.634 | 284 | 118 | 4 | 14 | 293 | 16 | 295 | 1.50e-104 | 308 |
| MS.gene066242.t1 | MTR_2g040830 | 53.684 | 285 | 123 | 5 | 14 | 293 | 16 | 296 | 4.76e-98 | 291 |
| MS.gene066242.t1 | MTR_2g040690 | 52.982 | 285 | 125 | 5 | 14 | 293 | 18 | 298 | 1.35e-97 | 290 |
| MS.gene066242.t1 | MTR_6g023340 | 50.000 | 286 | 134 | 7 | 18 | 297 | 20 | 302 | 5.28e-93 | 278 |
| MS.gene066242.t1 | MTR_2g040650 | 48.421 | 285 | 134 | 6 | 14 | 293 | 16 | 292 | 7.04e-86 | 260 |
| MS.gene066242.t1 | MTR_2g040870 | 49.057 | 159 | 77 | 2 | 16 | 174 | 15 | 169 | 4.44e-41 | 140 |
| MS.gene066242.t1 | MTR_2g040880 | 52.212 | 113 | 49 | 3 | 186 | 293 | 1 | 113 | 1.82e-35 | 125 |
| MS.gene066242.t1 | MTR_2g040890 | 42.683 | 164 | 80 | 6 | 12 | 166 | 8 | 166 | 3.91e-35 | 125 |
| MS.gene066242.t1 | MTR_2g040850 | 45.139 | 144 | 70 | 2 | 8 | 145 | 10 | 150 | 5.74e-31 | 116 |
| MS.gene066242.t1 | MTR_2g040900 | 46.774 | 124 | 60 | 4 | 180 | 297 | 18 | 141 | 4.90e-28 | 106 |
| MS.gene066242.t1 | MTR_4g077310 | 53.933 | 89 | 37 | 4 | 207 | 293 | 3 | 89 | 2.31e-23 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066242.t1 | AT5G24090 | 64.000 | 300 | 104 | 3 | 1 | 297 | 4 | 302 | 1.35e-142 | 404 |
Find 59 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTTGATTCCTTTATTT+TGG | 0.131017 | 1.1:-71501381 | None:intergenic |
| TTGTGAATTCATGGAATAAA+TGG | 0.242224 | 1.1:+71501770 | MS.gene066242:CDS |
| AACTTGGTTCCACCGAAAAT+TGG | 0.244758 | 1.1:+71501560 | MS.gene066242:CDS |
| CTTTCAATTGGTGGTGGAAT+TGG | 0.287500 | 1.1:+71501406 | MS.gene066242:CDS |
| AGGTTCCTTCGTTGCCATTT+TGG | 0.290608 | 1.1:-71501201 | None:intergenic |
| GCAATCTATTGGGGCCAAAA+TGG | 0.300822 | 1.1:+71501187 | MS.gene066242:CDS |
| GGGTATAGCACTTCTATTAT+TGG | 0.304491 | 1.1:+71501967 | MS.gene066242:CDS |
| TGACCTGCGAGATTCATTTC+AGG | 0.305610 | 1.1:-71501301 | None:intergenic |
| TAACTAACCTTGTGAATTCA+TGG | 0.311751 | 1.1:+71501761 | MS.gene066242:CDS |
| CTTAAAGGGTATAGTAGATA+TGG | 0.312136 | 1.1:+71501601 | MS.gene066242:CDS |
| AATCCACCTTGTCAATATAA+TGG | 0.323098 | 1.1:+71501733 | MS.gene066242:CDS |
| CTGGTGGCATAGCAATCTAT+TGG | 0.352724 | 1.1:+71501176 | MS.gene066242:CDS |
| ATCAAAGATTGCCAAAATAA+AGG | 0.357615 | 1.1:+71501370 | MS.gene066242:CDS |
| GACCGTTACCGAATTTGTTT+AGG | 0.359199 | 1.1:-71501273 | None:intergenic |
| TTGGGCACTGCACTTGAAAC+AGG | 0.362436 | 1.1:+71501676 | MS.gene066242:CDS |
| TGGTGGCATAGCAATCTATT+GGG | 0.384033 | 1.1:+71501177 | MS.gene066242:CDS |
| GAAAATTGGCAACACCTTGC+AGG | 0.393402 | 1.1:+71501574 | MS.gene066242:CDS |
| ATAGCTTTCCTAAACAAATT+CGG | 0.403876 | 1.1:+71501265 | MS.gene066242:CDS |
| TGCCGGAATAAAACCACTTC+CGG | 0.411953 | 1.1:-71501851 | None:intergenic |
| GGTTGCGCATGCTTCGGATA+AGG | 0.415599 | 1.1:-71501221 | None:intergenic |
| CTACTCTTTATCTTCAATTG+AGG | 0.422344 | 1.1:+71501432 | MS.gene066242:CDS |
| AAGTCATCTTCAAGACCATT+AGG | 0.427426 | 1.1:+71501502 | MS.gene066242:CDS |
| TTATCCGAAGCATGCGCAAC+CGG | 0.438403 | 1.1:+71501223 | MS.gene066242:CDS |
| TCTACAGCGGCGGCCGGAAG+TGG | 0.441284 | 1.1:+71501838 | MS.gene066242:CDS |
| TCTAAAACAGCATCACCTAA+TGG | 0.445847 | 1.1:-71501517 | None:intergenic |
| CCGGCATCTACAGCGGCGGC+CGG | 0.451172 | 1.1:+71501832 | MS.gene066242:CDS |
| AGGTTTCATGATTTGCAGAC+TGG | 0.456803 | 1.1:+71501946 | MS.gene066242:CDS |
| GTGCATGAATTTGGAAGTGA+TGG | 0.468935 | 1.1:-71501331 | None:intergenic |
| GCAACAAGAGTGAGGAATAG+AGG | 0.475574 | 1.1:-71501142 | None:intergenic |
| TGGACTAGCACTGTTCCAGC+TGG | 0.478277 | 1.1:+71501790 | MS.gene066242:CDS |
| CTTGTTGCAACTTCCCATGC+TGG | 0.478479 | 1.1:+71501157 | MS.gene066242:CDS |
| TATGGAAGAAAAGTGTATCT+TGG | 0.479714 | 1.1:+71501619 | MS.gene066242:CDS |
| AGTATGGAGGAGTGATGCTT+TGG | 0.487463 | 1.1:+71501920 | MS.gene066242:CDS |
| GACCTGCGAGATTCATTTCA+GGG | 0.492299 | 1.1:-71501300 | None:intergenic |
| GATTGCTATGCCACCAGCAT+GGG | 0.506152 | 1.1:-71501170 | None:intergenic |
| CCGGCCGCCGCTGTAGATGC+CGG | 0.519785 | 1.1:-71501832 | None:intergenic |
| TCTGAAGTCAACACATCTGC+CGG | 0.536946 | 1.1:-71501868 | None:intergenic |
| TTATCTGGAATTGGACATTG+AGG | 0.543911 | 1.1:-71501649 | None:intergenic |
| GGTTTCATGATTTGCAGACT+GGG | 0.544792 | 1.1:+71501947 | MS.gene066242:CDS |
| GAGGAGTGATGCTTTGGTCA+AGG | 0.544888 | 1.1:+71501926 | MS.gene066242:CDS |
| TTATGGAACACTTTCTTGGG+TGG | 0.560429 | 1.1:+71501478 | MS.gene066242:CDS |
| ACCCCTGAAATGAATCTCGC+AGG | 0.567411 | 1.1:+71501298 | MS.gene066242:CDS |
| TTCCTAAACAAATTCGGTAA+CGG | 0.579160 | 1.1:+71501271 | MS.gene066242:CDS |
| AGGGCTGCCGGCATCTACAG+CGG | 0.585171 | 1.1:+71501825 | MS.gene066242:CDS |
| TGGGGCCAAAATGGCAACGA+AGG | 0.591522 | 1.1:+71501196 | MS.gene066242:CDS |
| AGATTGCTATGCCACCAGCA+TGG | 0.592121 | 1.1:-71501171 | None:intergenic |
| TTTCCATTATATTGACAAGG+TGG | 0.592596 | 1.1:-71501736 | None:intergenic |
| GTTGCAACTTCCCATGCTGG+TGG | 0.594762 | 1.1:+71501160 | MS.gene066242:CDS |
| GGACTAGCACTGTTCCAGCT+GGG | 0.601285 | 1.1:+71501791 | MS.gene066242:CDS |
| GCTGCCGGCATCTACAGCGG+CGG | 0.604171 | 1.1:+71501828 | MS.gene066242:CDS |
| TTAGGAAAGCTATGTTAACA+TGG | 0.604430 | 1.1:-71501255 | None:intergenic |
| ATTTATTCCATGAATTCACA+AGG | 0.612674 | 1.1:-71501768 | None:intergenic |
| ACCCTTTAAGAAAACCTGCA+AGG | 0.616480 | 1.1:-71501588 | None:intergenic |
| ACCTGCGAGATTCATTTCAG+GGG | 0.619333 | 1.1:-71501299 | None:intergenic |
| ATGTTTCCATTATATTGACA+AGG | 0.620396 | 1.1:-71501739 | None:intergenic |
| TGCATGAATTTGGAAGTGAT+GGG | 0.620811 | 1.1:-71501330 | None:intergenic |
| TAGGAAAGCTATGTTAACAT+GGG | 0.626283 | 1.1:-71501254 | None:intergenic |
| GGGAAGTTGCAACAAGAGTG+AGG | 0.646970 | 1.1:-71501150 | None:intergenic |
| GGTGGCATAGCAATCTATTG+GGG | 0.654630 | 1.1:+71501178 | MS.gene066242:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAGAAGTCAAAAAAGTA+TGG | + | chr1.1:71501904-71501923 | MS.gene066242:CDS | 20.0% |
| !!! | AAACTTTGATTCCTTTATTT+TGG | - | chr1.1:71501384-71501403 | None:intergenic | 20.0% |
| !!! | ATAGATTTTGATATTGAACT+TGG | + | chr1.1:71501544-71501563 | MS.gene066242:CDS | 20.0% |
| !!! | ATCAAAGTTTTACTTTCAAT+TGG | + | chr1.1:71501394-71501413 | MS.gene066242:CDS | 20.0% |
| !!! | GAAACGTTTCAAAATTTTTA+TGG | + | chr1.1:71501461-71501480 | MS.gene066242:CDS | 20.0% |
| ! | ATAGCTTTCCTAAACAAATT+CGG | + | chr1.1:71501265-71501284 | MS.gene066242:CDS | 25.0% |
| ! | ATCAAAGATTGCCAAAATAA+AGG | + | chr1.1:71501370-71501389 | MS.gene066242:CDS | 25.0% |
| ! | ATGTTTCCATTATATTGACA+AGG | - | chr1.1:71501742-71501761 | None:intergenic | 25.0% |
| ! | ATTTATTCCATGAATTCACA+AGG | - | chr1.1:71501771-71501790 | None:intergenic | 25.0% |
| ! | TTGTGAATTCATGGAATAAA+TGG | + | chr1.1:71501770-71501789 | MS.gene066242:CDS | 25.0% |
| !! | AAAGTTTTACTTTCAATTGG+TGG | + | chr1.1:71501397-71501416 | MS.gene066242:CDS | 25.0% |
| !! | ATTTTTATGGAACACTTTCT+TGG | + | chr1.1:71501474-71501493 | MS.gene066242:CDS | 25.0% |
| !! | CCAATTCCAGATAAATTTTT+GGG | + | chr1.1:71501658-71501677 | MS.gene066242:CDS | 25.0% |
| !! | TCCAATTCCAGATAAATTTT+TGG | + | chr1.1:71501657-71501676 | MS.gene066242:CDS | 25.0% |
| !! | TTTTTATGGAACACTTTCTT+GGG | + | chr1.1:71501475-71501494 | MS.gene066242:CDS | 25.0% |
| !!! | TTTTTTGACTTCTTAATCAC+AGG | - | chr1.1:71501901-71501920 | None:intergenic | 25.0% |
| AATCCACCTTGTCAATATAA+TGG | + | chr1.1:71501733-71501752 | MS.gene066242:CDS | 30.0% | |
| CTACTCTTTATCTTCAATTG+AGG | + | chr1.1:71501432-71501451 | MS.gene066242:CDS | 30.0% | |
| TAACTAACCTTGTGAATTCA+TGG | + | chr1.1:71501761-71501780 | MS.gene066242:CDS | 30.0% | |
| TAGGAAAGCTATGTTAACAT+GGG | - | chr1.1:71501257-71501276 | None:intergenic | 30.0% | |
| TTAGGAAAGCTATGTTAACA+TGG | - | chr1.1:71501258-71501277 | None:intergenic | 30.0% | |
| TTCCTAAACAAATTCGGTAA+CGG | + | chr1.1:71501271-71501290 | MS.gene066242:CDS | 30.0% | |
| TTTCCATTATATTGACAAGG+TGG | - | chr1.1:71501739-71501758 | None:intergenic | 30.0% | |
| ! | AAGAAGTCAAAAAAGTATGG+AGG | + | chr1.1:71501907-71501926 | MS.gene066242:CDS | 30.0% |
| ! | CCCAAAAATTTATCTGGAAT+TGG | - | chr1.1:71501661-71501680 | None:intergenic | 30.0% |
| ! | CTGAATTTTGTGCATGAATT+TGG | - | chr1.1:71501343-71501362 | None:intergenic | 30.0% |
| ! | CTTAAAGGGTATAGTAGATA+TGG | + | chr1.1:71501601-71501620 | MS.gene066242:CDS | 30.0% |
| ! | TATGGAAGAAAAGTGTATCT+TGG | + | chr1.1:71501619-71501638 | MS.gene066242:CDS | 30.0% |
| !!! | AGGTCTTTTTGACTTTGTTT+GGG | + | chr1.1:71501696-71501715 | MS.gene066242:CDS | 30.0% |
| AAGTCATCTTCAAGACCATT+AGG | + | chr1.1:71501502-71501521 | MS.gene066242:CDS | 35.0% | |
| GGGTATAGCACTTCTATTAT+TGG | + | chr1.1:71501967-71501986 | MS.gene066242:CDS | 35.0% | |
| TGCATGAATTTGGAAGTGAT+GGG | - | chr1.1:71501333-71501352 | None:intergenic | 35.0% | |
| ! | ACCTTGCAGGTTTTCTTAAA+GGG | + | chr1.1:71501587-71501606 | MS.gene066242:CDS | 35.0% |
| ! | GTTTTACTTTCAATTGGTGG+TGG | + | chr1.1:71501400-71501419 | MS.gene066242:CDS | 35.0% |
| ! | TCTAAAACAGCATCACCTAA+TGG | - | chr1.1:71501520-71501539 | None:intergenic | 35.0% |
| ! | TTATCTGGAATTGGACATTG+AGG | - | chr1.1:71501652-71501671 | None:intergenic | 35.0% |
| !! | CAGCTGGGAAGATATTTTTA+GGG | + | chr1.1:71501806-71501825 | MS.gene066242:CDS | 35.0% |
| !!! | CAGGTCTTTTTGACTTTGTT+TGG | + | chr1.1:71501695-71501714 | MS.gene066242:CDS | 35.0% |
| !!! | GTTAACATGGGAGTATTTTC+CGG | - | chr1.1:71501245-71501264 | None:intergenic | 35.0% |
| !!! | TTAGGTGATGCTGTTTTAGA+TGG | + | chr1.1:71501520-71501539 | MS.gene066242:CDS | 35.0% |
| AACTTGGTTCCACCGAAAAT+TGG | + | chr1.1:71501560-71501579 | MS.gene066242:CDS | 40.0% | |
| CCTAAAAATATCTTCCCAGC+TGG | - | chr1.1:71501808-71501827 | None:intergenic | 40.0% | |
| GCAGTGCCCAAAAATTTATC+TGG | - | chr1.1:71501667-71501686 | None:intergenic | 40.0% | |
| GTGCATGAATTTGGAAGTGA+TGG | - | chr1.1:71501334-71501353 | None:intergenic | 40.0% | |
| TGGTGGCATAGCAATCTATT+GGG | + | chr1.1:71501177-71501196 | MS.gene066242:CDS | 40.0% | |
| TTATGGAACACTTTCTTGGG+TGG | + | chr1.1:71501478-71501497 | MS.gene066242:CDS | 40.0% | |
| ! | ACCCTTTAAGAAAACCTGCA+AGG | - | chr1.1:71501591-71501610 | None:intergenic | 40.0% |
| ! | AGGTTTCATGATTTGCAGAC+TGG | + | chr1.1:71501946-71501965 | MS.gene066242:CDS | 40.0% |
| ! | CACCTTGCAGGTTTTCTTAA+AGG | + | chr1.1:71501586-71501605 | MS.gene066242:CDS | 40.0% |
| ! | CCAGCTGGGAAGATATTTTT+AGG | + | chr1.1:71501805-71501824 | MS.gene066242:CDS | 40.0% |
| ! | GACCGTTACCGAATTTGTTT+AGG | - | chr1.1:71501276-71501295 | None:intergenic | 40.0% |
| ! | GGTTTCATGATTTGCAGACT+GGG | + | chr1.1:71501947-71501966 | MS.gene066242:CDS | 40.0% |
| !! | CTTTCAATTGGTGGTGGAAT+TGG | + | chr1.1:71501406-71501425 | MS.gene066242:CDS | 40.0% |
| !!! | GAAGATATTTTTAGGGCTGC+CGG | + | chr1.1:71501813-71501832 | MS.gene066242:CDS | 40.0% |
| !!! | TGCAAGGTGTTGCCAATTTT+CGG | - | chr1.1:71501575-71501594 | None:intergenic | 40.0% |
| ACCTGCGAGATTCATTTCAG+GGG | - | chr1.1:71501302-71501321 | None:intergenic | 45.0% | |
| AGTATGGAGGAGTGATGCTT+TGG | + | chr1.1:71501920-71501939 | MS.gene066242:CDS | 45.0% | |
| CTGGTGGCATAGCAATCTAT+TGG | + | chr1.1:71501176-71501195 | MS.gene066242:CDS | 45.0% | |
| GAAAATTGGCAACACCTTGC+AGG | + | chr1.1:71501574-71501593 | MS.gene066242:CDS | 45.0% | |
| GACCTGCGAGATTCATTTCA+GGG | - | chr1.1:71501303-71501322 | None:intergenic | 45.0% | |
| GCAACAAGAGTGAGGAATAG+AGG | - | chr1.1:71501145-71501164 | None:intergenic | 45.0% | |
| GCAATCTATTGGGGCCAAAA+TGG | + | chr1.1:71501187-71501206 | MS.gene066242:CDS | 45.0% | |
| GGTGGCATAGCAATCTATTG+GGG | + | chr1.1:71501178-71501197 | MS.gene066242:CDS | 45.0% | |
| TGACCTGCGAGATTCATTTC+AGG | - | chr1.1:71501304-71501323 | None:intergenic | 45.0% | |
| TGCCGGAATAAAACCACTTC+CGG | - | chr1.1:71501854-71501873 | None:intergenic | 45.0% | |
| ! | TCTGAAGTCAACACATCTGC+CGG | - | chr1.1:71501871-71501890 | None:intergenic | 45.0% |
| !! | AGGTTCCTTCGTTGCCATTT+TGG | - | chr1.1:71501204-71501223 | None:intergenic | 45.0% |
| !!! | AAGGTGTTGCCAATTTTCGG+TGG | - | chr1.1:71501572-71501591 | None:intergenic | 45.0% |
| ACCCCTGAAATGAATCTCGC+AGG | + | chr1.1:71501298-71501317 | MS.gene066242:CDS | 50.0% | |
| AGATTGCTATGCCACCAGCA+TGG | - | chr1.1:71501174-71501193 | None:intergenic | 50.0% | |
| CTTGTTGCAACTTCCCATGC+TGG | + | chr1.1:71501157-71501176 | MS.gene066242:CDS | 50.0% | |
| GAGGAGTGATGCTTTGGTCA+AGG | + | chr1.1:71501926-71501945 | MS.gene066242:CDS | 50.0% | |
| GATTGCTATGCCACCAGCAT+GGG | - | chr1.1:71501173-71501192 | None:intergenic | 50.0% | |
| GGGAAGTTGCAACAAGAGTG+AGG | - | chr1.1:71501153-71501172 | None:intergenic | 50.0% | |
| TTATCCGAAGCATGCGCAAC+CGG | + | chr1.1:71501223-71501242 | MS.gene066242:CDS | 50.0% | |
| ! | TTGGGCACTGCACTTGAAAC+AGG | + | chr1.1:71501676-71501695 | MS.gene066242:CDS | 50.0% |
| ! | TTTTCCGGTTGCGCATGCTT+CGG | - | chr1.1:71501230-71501249 | None:intergenic | 50.0% |
| !!! | GGCCGGAAGTGGTTTTATTC+CGG | + | chr1.1:71501849-71501868 | MS.gene066242:CDS | 50.0% |
| GGTTGCGCATGCTTCGGATA+AGG | - | chr1.1:71501224-71501243 | None:intergenic | 55.0% | |
| GTTGCAACTTCCCATGCTGG+TGG | + | chr1.1:71501160-71501179 | MS.gene066242:CDS | 55.0% | |
| TGGGGCCAAAATGGCAACGA+AGG | + | chr1.1:71501196-71501215 | MS.gene066242:CDS | 55.0% | |
| ! | GGACTAGCACTGTTCCAGCT+GGG | + | chr1.1:71501791-71501810 | MS.gene066242:CDS | 55.0% |
| !! | TGGACTAGCACTGTTCCAGC+TGG | + | chr1.1:71501790-71501809 | MS.gene066242:CDS | 55.0% |
| AGGGCTGCCGGCATCTACAG+CGG | + | chr1.1:71501825-71501844 | MS.gene066242:CDS | 65.0% | |
| GCTGCCGGCATCTACAGCGG+CGG | + | chr1.1:71501828-71501847 | MS.gene066242:CDS | 70.0% | |
| TCTACAGCGGCGGCCGGAAG+TGG | + | chr1.1:71501838-71501857 | MS.gene066242:CDS | 70.0% | |
| CCGGCATCTACAGCGGCGGC+CGG | + | chr1.1:71501832-71501851 | MS.gene066242:CDS | 75.0% | |
| CCGGCCGCCGCTGTAGATGC+CGG | - | chr1.1:71501835-71501854 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 71501106 | 71501999 | 71501106 | ID=MS.gene066242 |
| chr1.1 | mRNA | 71501106 | 71501999 | 71501106 | ID=MS.gene066242.t1;Parent=MS.gene066242 |
| chr1.1 | exon | 71501106 | 71501999 | 71501106 | ID=MS.gene066242.t1.exon1;Parent=MS.gene066242.t1 |
| chr1.1 | CDS | 71501106 | 71501999 | 71501106 | ID=cds.MS.gene066242.t1;Parent=MS.gene066242.t1 |
| Gene Sequence |
| Protein sequence |
