Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066296.t1 | RHN55279.1 | 97.2 | 536 | 15 | 0 | 1 | 536 | 57 | 592 | 2.2e-310 | 1074.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066296.t1 | Q3HRQ2 | 43.7 | 538 | 255 | 11 | 1 | 535 | 29 | 521 | 1.3e-120 | 434.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066296.t1 | G7K9S3 | 97.2 | 536 | 15 | 0 | 1 | 536 | 1 | 536 | 1.6e-310 | 1074.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050587 | MS.gene066296 | 0.819159 | 1.34E-52 | -1.69E-46 |
| MS.gene051789 | MS.gene066296 | 0.813242 | 2.83E-51 | -1.69E-46 |
| MS.gene052142 | MS.gene066296 | 0.850841 | 1.31E-60 | -1.69E-46 |
| MS.gene053383 | MS.gene066296 | 0.804008 | 2.65E-49 | -1.69E-46 |
| MS.gene05456 | MS.gene066296 | 0.8331 | 6.47E-56 | -1.69E-46 |
| MS.gene056380 | MS.gene066296 | 0.802365 | 5.81E-49 | -1.69E-46 |
| MS.gene059006 | MS.gene066296 | 0.811976 | 5.35E-51 | -1.69E-46 |
| MS.gene059768 | MS.gene066296 | 0.811788 | 5.88E-51 | -1.69E-46 |
| MS.gene060691 | MS.gene066296 | 0.825487 | 4.56E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066296.t1 | MTR_5g038410 | 97.201 | 536 | 15 | 0 | 1 | 536 | 1 | 536 | 0.0 | 1084 |
| MS.gene066296.t1 | MTR_7g114530 | 53.050 | 541 | 214 | 9 | 1 | 535 | 63 | 569 | 0.0 | 566 |
| MS.gene066296.t1 | MTR_3g113210 | 50.835 | 539 | 230 | 11 | 1 | 535 | 47 | 554 | 0.0 | 525 |
| MS.gene066296.t1 | MTR_1g023570 | 49.628 | 538 | 229 | 12 | 1 | 535 | 44 | 542 | 0.0 | 523 |
| MS.gene066296.t1 | MTR_6g004960 | 48.889 | 540 | 236 | 12 | 1 | 535 | 11 | 515 | 0.0 | 521 |
| MS.gene066296.t1 | MTR_3g075520 | 45.102 | 541 | 256 | 13 | 1 | 534 | 1 | 507 | 4.33e-152 | 445 |
| MS.gene066296.t1 | MTR_4g019520 | 44.444 | 540 | 245 | 13 | 1 | 535 | 42 | 531 | 1.81e-140 | 416 |
| MS.gene066296.t1 | MTR_8g102900 | 40.809 | 544 | 278 | 13 | 1 | 536 | 126 | 633 | 4.14e-133 | 401 |
| MS.gene066296.t1 | MTR_6g088300 | 39.416 | 548 | 288 | 12 | 1 | 536 | 70 | 585 | 3.08e-125 | 379 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066296.t1 | AT1G14430 | 56.089 | 542 | 199 | 9 | 1 | 535 | 55 | 564 | 0.0 | 578 |
| MS.gene066296.t1 | AT3G57620 | 52.700 | 537 | 215 | 8 | 1 | 536 | 49 | 547 | 0.0 | 572 |
| MS.gene066296.t1 | AT1G19900 | 49.074 | 540 | 235 | 14 | 1 | 536 | 45 | 548 | 4.74e-176 | 508 |
| MS.gene066296.t1 | AT1G75620 | 47.955 | 538 | 239 | 14 | 1 | 536 | 49 | 547 | 6.65e-169 | 489 |
| MS.gene066296.t1 | AT3G53950 | 44.259 | 540 | 252 | 12 | 1 | 535 | 48 | 543 | 5.64e-152 | 446 |
| MS.gene066296.t1 | AT5G19580 | 39.591 | 538 | 287 | 11 | 1 | 535 | 91 | 593 | 1.70e-135 | 405 |
| MS.gene066296.t1 | AT1G67290 | 40.260 | 539 | 284 | 12 | 1 | 535 | 110 | 614 | 2.48e-130 | 393 |
Find 173 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATGCAAGGTCAAAATTT+TGG | 0.150199 | 5.3:+26583371 | MS.gene066296:CDS |
| GCATCGGCTTTATGACTTTC+GGG | 0.245789 | 5.3:+26583073 | MS.gene066296:CDS |
| TGAAGCCACCGGTTTGTATT+AGG | 0.250836 | 5.3:-26582188 | None:intergenic |
| ATGAACGGAATAGGGTAATA+AGG | 0.251533 | 5.3:+26582547 | MS.gene066296:CDS |
| CGCATCGGCTTTATGACTTT+CGG | 0.257317 | 5.3:+26583072 | MS.gene066296:CDS |
| GCGTCGGTTTGTAGGGTTAA+AGG | 0.265253 | 5.3:-26582129 | None:intergenic |
| GGATTATCTTCGGCCGGATT+TGG | 0.268751 | 5.3:+26583136 | MS.gene066296:CDS |
| GATTGCGAATTCGGTTTATA+AGG | 0.271239 | 5.3:+26583430 | MS.gene066296:CDS |
| ATCTTCGACCGAACCGATTT+CGG | 0.273748 | 5.3:+26581988 | MS.gene066296:CDS |
| ACCGGGAAAGATTGCGAATT+CGG | 0.287671 | 5.3:+26583421 | MS.gene066296:CDS |
| ACCGAATTCGCAATCTTTCC+CGG | 0.312214 | 5.3:-26583422 | None:intergenic |
| TTCTCTTCACCAGGTATAAT+AGG | 0.318012 | 5.3:-26582576 | None:intergenic |
| GAATTCCTAGTGTTGCTACT+TGG | 0.319731 | 5.3:+26583525 | MS.gene066296:CDS |
| TGTTTGATTATGAACGGAAT+AGG | 0.322017 | 5.3:+26582538 | MS.gene066296:CDS |
| ATATGCGGCGGCGCGTTTCC+CGG | 0.329841 | 5.3:+26582690 | MS.gene066296:CDS |
| TTTGGTTTCGGGAGCTCATT+AGG | 0.343756 | 5.3:+26583398 | MS.gene066296:CDS |
| CGTGGAACCGGAGTGGGTTA+TGG | 0.343769 | 5.3:+26582788 | MS.gene066296:CDS |
| AGGCGTGAACGTTCGGAGTT+TGG | 0.345570 | 5.3:-26582223 | None:intergenic |
| AACAACTCAAATCTCATAAA+CGG | 0.347117 | 5.3:-26582966 | None:intergenic |
| TAATCGGATTCGTGTTTCTT+TGG | 0.348707 | 5.3:+26583262 | MS.gene066296:CDS |
| GAAGCCACCGGTTTGTATTA+GGG | 0.356878 | 5.3:-26582187 | None:intergenic |
| TCTCTTAATGTGGCCCCACC+TGG | 0.359119 | 5.3:+26583473 | MS.gene066296:CDS |
| CGACGCGTCGTTTAATCTCT+TGG | 0.360225 | 5.3:-26582388 | None:intergenic |
| TATAAAACCGGATACAAAAC+CGG | 0.364547 | 5.3:-26582924 | None:intergenic |
| TTCGGTGTCGTTTATGTTGA+GGG | 0.372755 | 5.3:+26583226 | MS.gene066296:CDS |
| AGCGAATGGTACGGCGGGTT+GGG | 0.379515 | 5.3:+26582887 | MS.gene066296:CDS |
| GTTTGATTATGAACGGAATA+GGG | 0.380008 | 5.3:+26582539 | MS.gene066296:CDS |
| GAGGACAAGGCGTGAACGTT+CGG | 0.384719 | 5.3:-26582230 | None:intergenic |
| GTATCCGACCGAGTTGAGTT+TGG | 0.385529 | 5.3:+26583100 | MS.gene066296:CDS |
| TTGTATTAGGGTTCCGGTGG+GGG | 0.387317 | 5.3:-26582175 | None:intergenic |
| CAATCACACGTGTTGTTATG+AGG | 0.393893 | 5.3:-26582249 | None:intergenic |
| ATTATTCTCTTCACCAGGAT+TGG | 0.399242 | 5.3:-26582448 | None:intergenic |
| GTTGTAACGGCAACGGTTGT+TGG | 0.399842 | 5.3:-26582031 | None:intergenic |
| CATAAACGGGTTATCTGAAC+CGG | 0.400646 | 5.3:-26582952 | None:intergenic |
| ACCGGTTTGTATTAGGGTTC+CGG | 0.401178 | 5.3:-26582181 | None:intergenic |
| GGGAGGTGAAGGAAGTTAAT+CGG | 0.401345 | 5.3:+26583246 | MS.gene066296:CDS |
| TATGTTGCCGTTGAATTTAA+CGG | 0.401690 | 5.3:+26582629 | MS.gene066296:CDS |
| CTCATAACAACACGTGTGAT+TGG | 0.405663 | 5.3:+26582250 | MS.gene066296:CDS |
| ACTCAACTCGGTCGGATACT+TGG | 0.422355 | 5.3:-26583096 | None:intergenic |
| CAGCGAATGGTACGGCGGGT+TGG | 0.423681 | 5.3:+26582886 | MS.gene066296:CDS |
| ATGTTGCCGTTGAATTTAAC+GGG | 0.426226 | 5.3:+26582630 | MS.gene066296:CDS |
| GATGTTGGAGGGACCGAAAT+CGG | 0.427515 | 5.3:-26582001 | None:intergenic |
| TCGGATTCGTGTTTCTTTGG+TGG | 0.438704 | 5.3:+26583265 | MS.gene066296:CDS |
| GGCCGCAATGTGTCCAAATC+CGG | 0.439575 | 5.3:-26583149 | None:intergenic |
| TAGTAGTTGTGGGAGGTTGA+AGG | 0.440502 | 5.3:+26582758 | MS.gene066296:CDS |
| AATTCCTAGTGTTGCTACTT+GGG | 0.441705 | 5.3:+26583526 | MS.gene066296:CDS |
| TAGAAGCTTCTAGTAGTTGT+GGG | 0.442569 | 5.3:+26582748 | MS.gene066296:CDS |
| GTTGTTGGAGAGGGAGATGT+TGG | 0.443662 | 5.3:-26582016 | None:intergenic |
| TGAACGGAATAGGGTAATAA+GGG | 0.449583 | 5.3:+26582548 | MS.gene066296:CDS |
| GAGTTTGGATGCGTATTATC+CGG | 0.452450 | 5.3:+26583115 | MS.gene066296:CDS |
| ACAACTCAAATCTCATAAAC+GGG | 0.458281 | 5.3:-26582965 | None:intergenic |
| GAACCGGGTTTGTATAAAAC+CGG | 0.460814 | 5.3:-26582936 | None:intergenic |
| GAAGGTTAGTGACGTGGAAC+CGG | 0.461696 | 5.3:+26582776 | MS.gene066296:CDS |
| AACACCAAGCGTCGGTTTGT+AGG | 0.462992 | 5.3:-26582137 | None:intergenic |
| CCCACTAAAATCCTGCCATC+TGG | 0.466682 | 5.3:-26583038 | None:intergenic |
| CGTATTATCCGGATTATCTT+CGG | 0.468087 | 5.3:+26583126 | MS.gene066296:CDS |
| AGAAGTTTCCGCGTTGGAGG+AGG | 0.474303 | 5.3:+26583340 | MS.gene066296:CDS |
| GTTGGAGAGGGAGATGTTGG+AGG | 0.480205 | 5.3:-26582013 | None:intergenic |
| GCCCGTGATTGTTGCGGTGG+AGG | 0.483184 | 5.3:+26583169 | MS.gene066296:CDS |
| CTAGAAGCTTCTAGTAGTTG+TGG | 0.485523 | 5.3:+26582747 | MS.gene066296:CDS |
| AGAATCTTTCTTCAAGTCGT+TGG | 0.486286 | 5.3:+26582286 | MS.gene066296:CDS |
| AAGAGAAATTATCCAAGTAC+TGG | 0.487044 | 5.3:+26582597 | MS.gene066296:CDS |
| TTTCATTACTTGCATGTGCA+TGG | 0.488438 | 5.3:-26581950 | None:intergenic |
| AAATCCGGCCGAAGATAATC+CGG | 0.490067 | 5.3:-26583134 | None:intergenic |
| TCATAACAACACGTGTGATT+GGG | 0.490943 | 5.3:+26582251 | MS.gene066296:CDS |
| GACGCGTCGTTTAATCTCTT+GGG | 0.491758 | 5.3:-26582387 | None:intergenic |
| CAAACCGGTGGCTTCAACGA+CGG | 0.493145 | 5.3:+26582195 | MS.gene066296:CDS |
| TAACCCTACAAACCGACGCT+TGG | 0.494194 | 5.3:+26582133 | MS.gene066296:CDS |
| ACACCAAGCGTCGGTTTGTA+GGG | 0.494396 | 5.3:-26582136 | None:intergenic |
| CTCTTAATGTGGCCCCACCT+GGG | 0.498554 | 5.3:+26583474 | MS.gene066296:CDS |
| ACGACAATGATTCTACCGTT+TGG | 0.499172 | 5.3:-26582330 | None:intergenic |
| GGTTAAAGGACGGAGGGTGT+TGG | 0.499844 | 5.3:-26582115 | None:intergenic |
| TAAAGGACGGAGGGTGTTGG+TGG | 0.500447 | 5.3:-26582112 | None:intergenic |
| CTATTCTGTTTGATTATGAA+CGG | 0.501281 | 5.3:+26582532 | MS.gene066296:CDS |
| CTGTGTTGTTGCCAGATGGC+AGG | 0.501400 | 5.3:+26583027 | MS.gene066296:CDS |
| ACCTCCACCGCAACAATCAC+GGG | 0.505122 | 5.3:-26583170 | None:intergenic |
| GTTTATAAGGCTACGGTCCG+TGG | 0.505354 | 5.3:+26583443 | MS.gene066296:CDS |
| ATAACAGAAGAACCAGTACT+TGG | 0.505676 | 5.3:-26582609 | None:intergenic |
| TCGGTAAAAGATGCAAGAAC+GGG | 0.505729 | 5.3:-26582476 | None:intergenic |
| TTTAGAAGTTTCCGCGTTGG+AGG | 0.505752 | 5.3:+26583337 | MS.gene066296:CDS |
| TTTCGGGAGCTCATTAGGAC+CGG | 0.507324 | 5.3:+26583403 | MS.gene066296:CDS |
| CTCACGCGAGATTCCAATCC+TGG | 0.507941 | 5.3:+26582435 | MS.gene066296:CDS |
| GGTAGAATCATTGTCGTTGG+TGG | 0.509315 | 5.3:+26582336 | MS.gene066296:CDS |
| GTCGGTAAAAGTAACATATC+CGG | 0.511143 | 5.3:-26582837 | None:intergenic |
| ACCGGAACCCTAATACAAAC+CGG | 0.513531 | 5.3:+26582180 | MS.gene066296:CDS |
| TAATTTCTCTTCTCTTCACC+AGG | 0.514242 | 5.3:-26582585 | None:intergenic |
| AAATGGGACGGAGTTTATTG+AGG | 0.514977 | 5.3:+26582656 | MS.gene066296:CDS |
| AACCTCCACCGCAACAATCA+CGG | 0.520367 | 5.3:-26583171 | None:intergenic |
| TTTCGGTGTCGTTTATGTTG+AGG | 0.521318 | 5.3:+26583225 | MS.gene066296:CDS |
| GTGGGGCCACATTAAGAGAT+GGG | 0.524217 | 5.3:-26583469 | None:intergenic |
| TTGGGAAAATGCGGCGAACC+CGG | 0.525327 | 5.3:+26582905 | MS.gene066296:CDS |
| GCCGGTGCCACGTGTCATGC+CGG | 0.525440 | 5.3:+26582818 | MS.gene066296:CDS |
| TGATTATGCGAGTAAGAAGA+AGG | 0.527765 | 5.3:+26582719 | MS.gene066296:CDS |
| GTGGGTTATGGAGGTTATGC+CGG | 0.535502 | 5.3:+26582800 | MS.gene066296:CDS |
| ACCGACGCTTGGTGTTCCTC+CGG | 0.538926 | 5.3:+26582144 | MS.gene066296:CDS |
| TTTGTATTAGGGTTCCGGTG+GGG | 0.539512 | 5.3:-26582176 | None:intergenic |
| CTCGCATAATCAAACGCGCC+GGG | 0.545174 | 5.3:-26582708 | None:intergenic |
| GTTTATGTTGAGGGAGGTGA+AGG | 0.546451 | 5.3:+26583235 | MS.gene066296:CDS |
| GTTTGTATTAGGGTTCCGGT+GGG | 0.550308 | 5.3:-26582177 | None:intergenic |
| TCCGGCATGACACGTGGCAC+CGG | 0.552469 | 5.3:-26582819 | None:intergenic |
| GGTGGTGATGTCGTAGAGGA+TGG | 0.556855 | 5.3:-26582094 | None:intergenic |
| GAACGGTGCAGCGAATGGTA+CGG | 0.558444 | 5.3:+26582878 | MS.gene066296:CDS |
| TGGAGGGACCGAAATCGGTT+CGG | 0.562922 | 5.3:-26581996 | None:intergenic |
| GAAAGTCATAAAGCCGATGC+GGG | 0.565238 | 5.3:-26583070 | None:intergenic |
| GGCCGGATTTGGACACATTG+CGG | 0.566436 | 5.3:+26583147 | MS.gene066296:CDS |
| AGTTTGAGAGCCATGTCGTG+AGG | 0.566612 | 5.3:-26582054 | None:intergenic |
| AGGGAATTTCCTATTATACC+TGG | 0.568085 | 5.3:+26582567 | MS.gene066296:CDS |
| GTCGGTAAAAGATGCAAGAA+CGG | 0.568658 | 5.3:-26582477 | None:intergenic |
| AAAGCATATAATACCCAGGT+GGG | 0.569057 | 5.3:-26583487 | None:intergenic |
| CCATGTCGTGAGGGTTGTAA+CGG | 0.569335 | 5.3:-26582044 | None:intergenic |
| GTAACCGTCGTTGAAGCCAC+CGG | 0.572383 | 5.3:-26582199 | None:intergenic |
| TAAAGATTATTCTCTTCACC+AGG | 0.576084 | 5.3:-26582453 | None:intergenic |
| GGTGCAGCGAATGGTACGGC+GGG | 0.576673 | 5.3:+26582882 | MS.gene066296:CDS |
| TTTATAAGGCTACGGTCCGT+GGG | 0.578956 | 5.3:+26583444 | MS.gene066296:CDS |
| TTCGGGAGCTCATTAGGACC+GGG | 0.579951 | 5.3:+26583404 | MS.gene066296:CDS |
| TCAGCTGTGTTGTTGCCAGA+TGG | 0.582035 | 5.3:+26583023 | MS.gene066296:CDS |
| TTGGAGAGGGAGATGTTGGA+GGG | 0.582218 | 5.3:-26582012 | None:intergenic |
| CACGTGTTGTTATGAGGACA+AGG | 0.582442 | 5.3:-26582243 | None:intergenic |
| CCGTTACAACCCTCACGACA+TGG | 0.584623 | 5.3:+26582044 | MS.gene066296:CDS |
| TAGTGACGTGGAACCGGAGT+GGG | 0.585014 | 5.3:+26582782 | MS.gene066296:CDS |
| ACGGCAACGGTTGTTGGAGA+GGG | 0.586247 | 5.3:-26582025 | None:intergenic |
| AACGGCAACGGTTGTTGGAG+AGG | 0.586360 | 5.3:-26582026 | None:intergenic |
| TACATCCTTGGTGTACTCGC+TGG | 0.588172 | 5.3:-26582993 | None:intergenic |
| GGTGGGGCCACATTAAGAGA+TGG | 0.589155 | 5.3:-26583470 | None:intergenic |
| AACGGTAGAATCATTGTCGT+TGG | 0.591020 | 5.3:+26582333 | MS.gene066296:CDS |
| GGTTTGTATTAGGGTTCCGG+TGG | 0.600864 | 5.3:-26582178 | None:intergenic |
| GAATTCGGTTTATAAGGCTA+CGG | 0.601203 | 5.3:+26583436 | MS.gene066296:CDS |
| GCTGATGAATGATACATCCT+TGG | 0.605224 | 5.3:-26583005 | None:intergenic |
| TCGAATCAGATTCTACCAAA+CGG | 0.605478 | 5.3:+26582315 | MS.gene066296:CDS |
| GTTTGAGAGCCATGTCGTGA+GGG | 0.606458 | 5.3:-26582053 | None:intergenic |
| ATTCGTTCGCGATGAATCAG+CGG | 0.607954 | 5.3:+26583306 | MS.gene066296:CDS |
| AAAATAATCACATTCCCCGT+CGG | 0.611548 | 5.3:-26582855 | None:intergenic |
| GCGGCCCGTGATTGTTGCGG+TGG | 0.618565 | 5.3:+26583166 | MS.gene066296:CDS |
| ATAAAACCGGATACAAAACC+GGG | 0.620007 | 5.3:-26582923 | None:intergenic |
| TGGGTGGGAGTAACCCGCAT+CGG | 0.624841 | 5.3:+26583057 | MS.gene066296:CDS |
| TTGTAGGGTTAAAGGACGGA+GGG | 0.626942 | 5.3:-26582121 | None:intergenic |
| AACATATCCGGCATGACACG+TGG | 0.628719 | 5.3:-26582825 | None:intergenic |
| TGGGGCCACATTAAGAGATG+GGG | 0.629427 | 5.3:-26583468 | None:intergenic |
| TGAACCCAAGTAGCAACACT+AGG | 0.630118 | 5.3:-26583530 | None:intergenic |
| TTATCCGGATTATCTTCGGC+CGG | 0.632081 | 5.3:+26583130 | MS.gene066296:CDS |
| TACGGCGGGTTGGGAAAATG+CGG | 0.632527 | 5.3:+26582896 | MS.gene066296:CDS |
| CGGTGCAGCGAATGGTACGG+CGG | 0.633602 | 5.3:+26582881 | MS.gene066296:CDS |
| GGGGCCACATTAAGAGATGG+GGG | 0.634982 | 5.3:-26583467 | None:intergenic |
| GGAACCGGAGTGGGTTATGG+AGG | 0.636417 | 5.3:+26582791 | MS.gene066296:CDS |
| ATTGCGGCCCGTGATTGTTG+CGG | 0.636678 | 5.3:+26583163 | MS.gene066296:CDS |
| ATAAACGGGTTATCTGAACC+GGG | 0.642464 | 5.3:-26582951 | None:intergenic |
| CGTGAGGGTTGTAACGGCAA+CGG | 0.643632 | 5.3:-26582038 | None:intergenic |
| ACTCGCATAATCAAACGCGC+CGG | 0.648319 | 5.3:-26582709 | None:intergenic |
| GGTGTCGTTTATGTTGAGGG+AGG | 0.650463 | 5.3:+26583229 | MS.gene066296:CDS |
| ATAACCTCCATAACCCACTC+CGG | 0.655023 | 5.3:-26582795 | None:intergenic |
| CGAAAGTCATAAAGCCGATG+CGG | 0.656522 | 5.3:-26583071 | None:intergenic |
| GCATCCAAACTCAACTCGGT+CGG | 0.656619 | 5.3:-26583104 | None:intergenic |
| GAGGTTGTGAATTCTATGCA+AGG | 0.658114 | 5.3:+26583359 | MS.gene066296:CDS |
| AAGCTTCTAGTAGTTGTGGG+AGG | 0.659013 | 5.3:+26582751 | MS.gene066296:CDS |
| TTTGTAGGGTTAAAGGACGG+AGG | 0.667619 | 5.3:-26582122 | None:intergenic |
| GTTGAGATTATGATATGCGG+CGG | 0.668102 | 5.3:+26582678 | MS.gene066296:CDS |
| ACCGGAGGAACACCAAGCGT+CGG | 0.668500 | 5.3:-26582145 | None:intergenic |
| CGGTTTGTAGGGTTAAAGGA+CGG | 0.668642 | 5.3:-26582125 | None:intergenic |
| TGTTGGTGGTGATGTCGTAG+AGG | 0.669463 | 5.3:-26582098 | None:intergenic |
| ATACGCATCCAAACTCAACT+CGG | 0.671359 | 5.3:-26583108 | None:intergenic |
| GAGGTTGAAGGTTAGTGACG+TGG | 0.684584 | 5.3:+26582770 | MS.gene066296:CDS |
| TTAGTGACGTGGAACCGGAG+TGG | 0.687761 | 5.3:+26582781 | MS.gene066296:CDS |
| GTCGTAGAGGATGGAATGAG+CGG | 0.703707 | 5.3:-26582085 | None:intergenic |
| GAGGTTGAGATTATGATATG+CGG | 0.704582 | 5.3:+26582675 | MS.gene066296:CDS |
| AAGATGAAAAGCTTCCCCGT+CGG | 0.720817 | 5.3:-26582495 | None:intergenic |
| AAGCATATAATACCCAGGTG+GGG | 0.721642 | 5.3:-26583486 | None:intergenic |
| AATCAAACAGAATAGAACGA+CGG | 0.729553 | 5.3:-26582524 | None:intergenic |
| AAAAGCATATAATACCCAGG+TGG | 0.730356 | 5.3:-26583488 | None:intergenic |
| AACGAATGAGTAGTAAACGA+CGG | 0.736774 | 5.3:-26583290 | None:intergenic |
| GGAACCCTAATACAAACCGG+TGG | 0.740832 | 5.3:+26582183 | MS.gene066296:CDS |
| TAGCACCAGCGAGTACACCA+AGG | 0.745866 | 5.3:+26582988 | MS.gene066296:CDS |
| ATTCACAACCTCCTCCAACG+CGG | 0.761718 | 5.3:-26583348 | None:intergenic |
| CAACACTAGGAATTCCAGCG+TGG | 0.773908 | 5.3:-26583517 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AACAACTCAAATCTCATAAA+CGG | - | chr5.3:26582969-26582988 | None:intergenic | 25.0% |
| ! | CTATTCTGTTTGATTATGAA+CGG | + | chr5.3:26582532-26582551 | MS.gene066296:CDS | 25.0% |
| ! | TGAATTTAACGGGAAAAAAT+GGG | + | chr5.3:26582640-26582659 | MS.gene066296:CDS | 25.0% |
| ! | TTGAATTTAACGGGAAAAAA+TGG | + | chr5.3:26582639-26582658 | MS.gene066296:CDS | 25.0% |
| !!! | TTTTTTCCCGTTAAATTCAA+CGG | - | chr5.3:26582639-26582658 | None:intergenic | 25.0% |
| AAGAGAAATTATCCAAGTAC+TGG | + | chr5.3:26582597-26582616 | MS.gene066296:CDS | 30.0% | |
| AATCAAACAGAATAGAACGA+CGG | - | chr5.3:26582527-26582546 | None:intergenic | 30.0% | |
| ACAACTCAAATCTCATAAAC+GGG | - | chr5.3:26582968-26582987 | None:intergenic | 30.0% | |
| GTTTGATTATGAACGGAATA+GGG | + | chr5.3:26582539-26582558 | MS.gene066296:CDS | 30.0% | |
| TAAAGATTATTCTCTTCACC+AGG | - | chr5.3:26582456-26582475 | None:intergenic | 30.0% | |
| TATAAAACCGGATACAAAAC+CGG | - | chr5.3:26582927-26582946 | None:intergenic | 30.0% | |
| TATGTTGCCGTTGAATTTAA+CGG | + | chr5.3:26582629-26582648 | MS.gene066296:CDS | 30.0% | |
| TGTTTGATTATGAACGGAAT+AGG | + | chr5.3:26582538-26582557 | MS.gene066296:CDS | 30.0% | |
| ! | ACAAAAAGCATATAATACCC+AGG | - | chr5.3:26583494-26583513 | None:intergenic | 30.0% |
| ! | TCTATGCAAGGTCAAAATTT+TGG | + | chr5.3:26583371-26583390 | MS.gene066296:CDS | 30.0% |
| !! | AATTTTGGTGAGTTTGGTTT+CGG | + | chr5.3:26583386-26583405 | MS.gene066296:CDS | 30.0% |
| !! | ATCGTATGAGAGTTTGTTTT+CGG | + | chr5.3:26583208-26583227 | MS.gene066296:CDS | 30.0% |
| !!! | GGGAATGTGATTATTTTGAA+CGG | + | chr5.3:26582861-26582880 | MS.gene066296:CDS | 30.0% |
| AAAATAATCACATTCCCCGT+CGG | - | chr5.3:26582858-26582877 | None:intergenic | 35.0% | |
| AAAGCATATAATACCCAGGT+GGG | - | chr5.3:26583490-26583509 | None:intergenic | 35.0% | |
| AACGAATGAGTAGTAAACGA+CGG | - | chr5.3:26583293-26583312 | None:intergenic | 35.0% | |
| AGAATCTTTCTTCAAGTCGT+TGG | + | chr5.3:26582286-26582305 | MS.gene066296:CDS | 35.0% | |
| AGGGAATTTCCTATTATACC+TGG | + | chr5.3:26582567-26582586 | MS.gene066296:CDS | 35.0% | |
| ATAAAACCGGATACAAAACC+GGG | - | chr5.3:26582926-26582945 | None:intergenic | 35.0% | |
| ATAACAGAAGAACCAGTACT+TGG | - | chr5.3:26582612-26582631 | None:intergenic | 35.0% | |
| ATGAACGGAATAGGGTAATA+AGG | + | chr5.3:26582547-26582566 | MS.gene066296:CDS | 35.0% | |
| ATGTTGCCGTTGAATTTAAC+GGG | + | chr5.3:26582630-26582649 | MS.gene066296:CDS | 35.0% | |
| ATTATTCTCTTCACCAGGAT+TGG | - | chr5.3:26582451-26582470 | None:intergenic | 35.0% | |
| CGTATTATCCGGATTATCTT+CGG | + | chr5.3:26583126-26583145 | MS.gene066296:CDS | 35.0% | |
| GAATTCGGTTTATAAGGCTA+CGG | + | chr5.3:26583436-26583455 | MS.gene066296:CDS | 35.0% | |
| GAGGTTGAGATTATGATATG+CGG | + | chr5.3:26582675-26582694 | MS.gene066296:CDS | 35.0% | |
| GATTGCGAATTCGGTTTATA+AGG | + | chr5.3:26583430-26583449 | MS.gene066296:CDS | 35.0% | |
| GTCGGTAAAAGTAACATATC+CGG | - | chr5.3:26582840-26582859 | None:intergenic | 35.0% | |
| TAATCGGATTCGTGTTTCTT+TGG | + | chr5.3:26583262-26583281 | MS.gene066296:CDS | 35.0% | |
| TAATTTCTCTTCTCTTCACC+AGG | - | chr5.3:26582588-26582607 | None:intergenic | 35.0% | |
| TAGAAGCTTCTAGTAGTTGT+GGG | + | chr5.3:26582748-26582767 | MS.gene066296:CDS | 35.0% | |
| TCATAACAACACGTGTGATT+GGG | + | chr5.3:26582251-26582270 | MS.gene066296:CDS | 35.0% | |
| TCGAATCAGATTCTACCAAA+CGG | + | chr5.3:26582315-26582334 | MS.gene066296:CDS | 35.0% | |
| TGAACGGAATAGGGTAATAA+GGG | + | chr5.3:26582548-26582567 | MS.gene066296:CDS | 35.0% | |
| TGATTATGCGAGTAAGAAGA+AGG | + | chr5.3:26582719-26582738 | MS.gene066296:CDS | 35.0% | |
| TTCTCTTCACCAGGTATAAT+AGG | - | chr5.3:26582579-26582598 | None:intergenic | 35.0% | |
| TTTAACGGGAAAAAATGGGA+CGG | + | chr5.3:26582644-26582663 | MS.gene066296:CDS | 35.0% | |
| ! | AAAAGCATATAATACCCAGG+TGG | - | chr5.3:26583491-26583510 | None:intergenic | 35.0% |
| ! | AATTCCTAGTGTTGCTACTT+GGG | + | chr5.3:26583526-26583545 | MS.gene066296:CDS | 35.0% |
| !! | ATTTTGGTGAGTTTGGTTTC+GGG | + | chr5.3:26583387-26583406 | MS.gene066296:CDS | 35.0% |
| !! | GGTCAAAATTTTGGTGAGTT+TGG | + | chr5.3:26583380-26583399 | MS.gene066296:CDS | 35.0% |
| !! | TATCCGGTTTTATACAAACC+CGG | + | chr5.3:26582933-26582952 | MS.gene066296:CDS | 35.0% |
| !!! | ATATGTTACTTTTACCGACG+GGG | + | chr5.3:26582841-26582860 | MS.gene066296:CDS | 35.0% |
| !!! | GATATGTTACTTTTACCGAC+GGG | + | chr5.3:26582840-26582859 | MS.gene066296:CDS | 35.0% |
| !!! | GGATATGTTACTTTTACCGA+CGG | + | chr5.3:26582839-26582858 | MS.gene066296:CDS | 35.0% |
| AAATGGGACGGAGTTTATTG+AGG | + | chr5.3:26582656-26582675 | MS.gene066296:CDS | 40.0% | |
| AACGGTAGAATCATTGTCGT+TGG | + | chr5.3:26582333-26582352 | MS.gene066296:CDS | 40.0% | |
| AAGCATATAATACCCAGGTG+GGG | - | chr5.3:26583489-26583508 | None:intergenic | 40.0% | |
| ACGACAATGATTCTACCGTT+TGG | - | chr5.3:26582333-26582352 | None:intergenic | 40.0% | |
| ATACGCATCCAAACTCAACT+CGG | - | chr5.3:26583111-26583130 | None:intergenic | 40.0% | |
| CTAGAAGCTTCTAGTAGTTG+TGG | + | chr5.3:26582747-26582766 | MS.gene066296:CDS | 40.0% | |
| CTCATAACAACACGTGTGAT+TGG | + | chr5.3:26582250-26582269 | MS.gene066296:CDS | 40.0% | |
| GAACCGGGTTTGTATAAAAC+CGG | - | chr5.3:26582939-26582958 | None:intergenic | 40.0% | |
| GAGGTTGTGAATTCTATGCA+AGG | + | chr5.3:26583359-26583378 | MS.gene066296:CDS | 40.0% | |
| GAGTTTGGATGCGTATTATC+CGG | + | chr5.3:26583115-26583134 | MS.gene066296:CDS | 40.0% | |
| GCTGATGAATGATACATCCT+TGG | - | chr5.3:26583008-26583027 | None:intergenic | 40.0% | |
| GTCGGTAAAAGATGCAAGAA+CGG | - | chr5.3:26582480-26582499 | None:intergenic | 40.0% | |
| GTTGAGATTATGATATGCGG+CGG | + | chr5.3:26582678-26582697 | MS.gene066296:CDS | 40.0% | |
| TCGGTAAAAGATGCAAGAAC+GGG | - | chr5.3:26582479-26582498 | None:intergenic | 40.0% | |
| ! | CAATCACACGTGTTGTTATG+AGG | - | chr5.3:26582252-26582271 | None:intergenic | 40.0% |
| ! | GAATTCCTAGTGTTGCTACT+TGG | + | chr5.3:26583525-26583544 | MS.gene066296:CDS | 40.0% |
| ! | GTTCTTGCATCTTTTACCGA+CGG | + | chr5.3:26582479-26582498 | MS.gene066296:CDS | 40.0% |
| ! | TTCTTGCATCTTTTACCGAC+GGG | + | chr5.3:26582480-26582499 | MS.gene066296:CDS | 40.0% |
| !! | ATAAACGGGTTATCTGAACC+GGG | - | chr5.3:26582954-26582973 | None:intergenic | 40.0% |
| !! | CATAAACGGGTTATCTGAAC+CGG | - | chr5.3:26582955-26582974 | None:intergenic | 40.0% |
| !! | GTTTTTAGAAGTTTCCGCGT+TGG | + | chr5.3:26583334-26583353 | MS.gene066296:CDS | 40.0% |
| !! | TTCGGTGTCGTTTATGTTGA+GGG | + | chr5.3:26583226-26583245 | MS.gene066296:CDS | 40.0% |
| !! | TTTCGGTGTCGTTTATGTTG+AGG | + | chr5.3:26583225-26583244 | MS.gene066296:CDS | 40.0% |
| AAATCCGGCCGAAGATAATC+CGG | - | chr5.3:26583137-26583156 | None:intergenic | 45.0% | |
| AAGATGAAAAGCTTCCCCGT+CGG | - | chr5.3:26582498-26582517 | None:intergenic | 45.0% | |
| AAGCTTCTAGTAGTTGTGGG+AGG | + | chr5.3:26582751-26582770 | MS.gene066296:CDS | 45.0% | |
| ACCGAATTCGCAATCTTTCC+CGG | - | chr5.3:26583425-26583444 | None:intergenic | 45.0% | |
| ACCGGAACCCTAATACAAAC+CGG | + | chr5.3:26582180-26582199 | MS.gene066296:CDS | 45.0% | |
| ACCGGGAAAGATTGCGAATT+CGG | + | chr5.3:26583421-26583440 | MS.gene066296:CDS | 45.0% | |
| ATAACCTCCATAACCCACTC+CGG | - | chr5.3:26582798-26582817 | None:intergenic | 45.0% | |
| ATTCGTTCGCGATGAATCAG+CGG | + | chr5.3:26583306-26583325 | MS.gene066296:CDS | 45.0% | |
| CGAAAGTCATAAAGCCGATG+CGG | - | chr5.3:26583074-26583093 | None:intergenic | 45.0% | |
| CGGTTTGTAGGGTTAAAGGA+CGG | - | chr5.3:26582128-26582147 | None:intergenic | 45.0% | |
| GAAAGTCATAAAGCCGATGC+GGG | - | chr5.3:26583073-26583092 | None:intergenic | 45.0% | |
| GACGCGTCGTTTAATCTCTT+GGG | - | chr5.3:26582390-26582409 | None:intergenic | 45.0% | |
| GGGAGGTGAAGGAAGTTAAT+CGG | + | chr5.3:26583246-26583265 | MS.gene066296:CDS | 45.0% | |
| GGTAGAATCATTGTCGTTGG+TGG | + | chr5.3:26582336-26582355 | MS.gene066296:CDS | 45.0% | |
| GTTTATGTTGAGGGAGGTGA+AGG | + | chr5.3:26583235-26583254 | MS.gene066296:CDS | 45.0% | |
| GTTTGTATTAGGGTTCCGGT+GGG | - | chr5.3:26582180-26582199 | None:intergenic | 45.0% | |
| TAGTAGTTGTGGGAGGTTGA+AGG | + | chr5.3:26582758-26582777 | MS.gene066296:CDS | 45.0% | |
| TCGGATTCGTGTTTCTTTGG+TGG | + | chr5.3:26583265-26583284 | MS.gene066296:CDS | 45.0% | |
| TGAACCCAAGTAGCAACACT+AGG | - | chr5.3:26583533-26583552 | None:intergenic | 45.0% | |
| TTATCCGGATTATCTTCGGC+CGG | + | chr5.3:26583130-26583149 | MS.gene066296:CDS | 45.0% | |
| TTGTAGGGTTAAAGGACGGA+GGG | - | chr5.3:26582124-26582143 | None:intergenic | 45.0% | |
| TTTAGAAGTTTCCGCGTTGG+AGG | + | chr5.3:26583337-26583356 | MS.gene066296:CDS | 45.0% | |
| TTTATAAGGCTACGGTCCGT+GGG | + | chr5.3:26583444-26583463 | MS.gene066296:CDS | 45.0% | |
| TTTGTAGGGTTAAAGGACGG+AGG | - | chr5.3:26582125-26582144 | None:intergenic | 45.0% | |
| TTTGTATTAGGGTTCCGGTG+GGG | - | chr5.3:26582179-26582198 | None:intergenic | 45.0% | |
| ! | ATCTTCGACCGAACCGATTT+CGG | + | chr5.3:26581988-26582007 | MS.gene066296:CDS | 45.0% |
| ! | ATTTTGAACGGTGCAGCGAA+TGG | + | chr5.3:26582873-26582892 | MS.gene066296:CDS | 45.0% |
| ! | CACGTGTTGTTATGAGGACA+AGG | - | chr5.3:26582246-26582265 | None:intergenic | 45.0% |
| ! | TCTTGCATCTTTTACCGACG+GGG | + | chr5.3:26582481-26582500 | MS.gene066296:CDS | 45.0% |
| ! | TTTGGTTTCGGGAGCTCATT+AGG | + | chr5.3:26583398-26583417 | MS.gene066296:CDS | 45.0% |
| !! | ACCGGTTTGTATTAGGGTTC+CGG | - | chr5.3:26582184-26582203 | None:intergenic | 45.0% |
| !! | ATGCTTTTTGTTGTCCACGC+TGG | + | chr5.3:26583503-26583522 | MS.gene066296:CDS | 45.0% |
| !! | ATGGCAGGATTTTAGTGGGT+GGG | + | chr5.3:26583042-26583061 | MS.gene066296:CDS | 45.0% |
| !! | CCAGATGGCAGGATTTTAGT+GGG | + | chr5.3:26583038-26583057 | MS.gene066296:CDS | 45.0% |
| !! | CGCATCGGCTTTATGACTTT+CGG | + | chr5.3:26583072-26583091 | MS.gene066296:CDS | 45.0% |
| !! | GAAGCCACCGGTTTGTATTA+GGG | - | chr5.3:26582190-26582209 | None:intergenic | 45.0% |
| !! | GCATCGGCTTTATGACTTTC+GGG | + | chr5.3:26583073-26583092 | MS.gene066296:CDS | 45.0% |
| !! | TGAAGCCACCGGTTTGTATT+AGG | - | chr5.3:26582191-26582210 | None:intergenic | 45.0% |
| AACATATCCGGCATGACACG+TGG | - | chr5.3:26582828-26582847 | None:intergenic | 50.0% | |
| AACCTCCACCGCAACAATCA+CGG | - | chr5.3:26583174-26583193 | None:intergenic | 50.0% | |
| ACTCAACTCGGTCGGATACT+TGG | - | chr5.3:26583099-26583118 | None:intergenic | 50.0% | |
| ACTCGCATAATCAAACGCGC+CGG | - | chr5.3:26582712-26582731 | None:intergenic | 50.0% | |
| AGTTTGAGAGCCATGTCGTG+AGG | - | chr5.3:26582057-26582076 | None:intergenic | 50.0% | |
| ATTCACAACCTCCTCCAACG+CGG | - | chr5.3:26583351-26583370 | None:intergenic | 50.0% | |
| CAACACTAGGAATTCCAGCG+TGG | - | chr5.3:26583520-26583539 | None:intergenic | 50.0% | |
| CCATGTCGTGAGGGTTGTAA+CGG | - | chr5.3:26582047-26582066 | None:intergenic | 50.0% | |
| CCCACTAAAATCCTGCCATC+TGG | - | chr5.3:26583041-26583060 | None:intergenic | 50.0% | |
| CGACGCGTCGTTTAATCTCT+TGG | - | chr5.3:26582391-26582410 | None:intergenic | 50.0% | |
| GAAGGTTAGTGACGTGGAAC+CGG | + | chr5.3:26582776-26582795 | MS.gene066296:CDS | 50.0% | |
| GAGGTTGAAGGTTAGTGACG+TGG | + | chr5.3:26582770-26582789 | MS.gene066296:CDS | 50.0% | |
| GATGTTGGAGGGACCGAAAT+CGG | - | chr5.3:26582004-26582023 | None:intergenic | 50.0% | |
| GCATCCAAACTCAACTCGGT+CGG | - | chr5.3:26583107-26583126 | None:intergenic | 50.0% | |
| GGAACCCTAATACAAACCGG+TGG | + | chr5.3:26582183-26582202 | MS.gene066296:CDS | 50.0% | |
| GGATTATCTTCGGCCGGATT+TGG | + | chr5.3:26583136-26583155 | MS.gene066296:CDS | 50.0% | |
| GGTTTGTATTAGGGTTCCGG+TGG | - | chr5.3:26582181-26582200 | None:intergenic | 50.0% | |
| GTCGTAGAGGATGGAATGAG+CGG | - | chr5.3:26582088-26582107 | None:intergenic | 50.0% | |
| GTGGGGCCACATTAAGAGAT+GGG | - | chr5.3:26583472-26583491 | None:intergenic | 50.0% | |
| GTTGTAACGGCAACGGTTGT+TGG | - | chr5.3:26582034-26582053 | None:intergenic | 50.0% | |
| GTTGTTGGAGAGGGAGATGT+TGG | - | chr5.3:26582019-26582038 | None:intergenic | 50.0% | |
| GTTTATAAGGCTACGGTCCG+TGG | + | chr5.3:26583443-26583462 | MS.gene066296:CDS | 50.0% | |
| GTTTGAGAGCCATGTCGTGA+GGG | - | chr5.3:26582056-26582075 | None:intergenic | 50.0% | |
| TAACCCTACAAACCGACGCT+TGG | + | chr5.3:26582133-26582152 | MS.gene066296:CDS | 50.0% | |
| TGGGGCCACATTAAGAGATG+GGG | - | chr5.3:26583471-26583490 | None:intergenic | 50.0% | |
| TTGGAGAGGGAGATGTTGGA+GGG | - | chr5.3:26582015-26582034 | None:intergenic | 50.0% | |
| TTGTATTAGGGTTCCGGTGG+GGG | - | chr5.3:26582178-26582197 | None:intergenic | 50.0% | |
| TTTCGGGAGCTCATTAGGAC+CGG | + | chr5.3:26583403-26583422 | MS.gene066296:CDS | 50.0% | |
| ! | GCCAGATGGCAGGATTTTAG+TGG | + | chr5.3:26583037-26583056 | MS.gene066296:CDS | 50.0% |
| ! | GTATCCGACCGAGTTGAGTT+TGG | + | chr5.3:26583100-26583119 | MS.gene066296:CDS | 50.0% |
| ! | GTGGGTTATGGAGGTTATGC+CGG | + | chr5.3:26582800-26582819 | MS.gene066296:CDS | 50.0% |
| ! | TACATCCTTGGTGTACTCGC+TGG | - | chr5.3:26582996-26583015 | None:intergenic | 50.0% |
| ! | TCAGCTGTGTTGTTGCCAGA+TGG | + | chr5.3:26583023-26583042 | MS.gene066296:CDS | 50.0% |
| !! | AACACCAAGCGTCGGTTTGT+AGG | - | chr5.3:26582140-26582159 | None:intergenic | 50.0% |
| !! | ACACCAAGCGTCGGTTTGTA+GGG | - | chr5.3:26582139-26582158 | None:intergenic | 50.0% |
| !! | GATGGCAGGATTTTAGTGGG+TGG | + | chr5.3:26583041-26583060 | MS.gene066296:CDS | 50.0% |
| !! | GCGTCGGTTTGTAGGGTTAA+AGG | - | chr5.3:26582132-26582151 | None:intergenic | 50.0% |
| !! | GGTGTCGTTTATGTTGAGGG+AGG | + | chr5.3:26583229-26583248 | MS.gene066296:CDS | 50.0% |
| !! | TGTTGGTGGTGATGTCGTAG+AGG | - | chr5.3:26582101-26582120 | None:intergenic | 50.0% |
| AACGGCAACGGTTGTTGGAG+AGG | - | chr5.3:26582029-26582048 | None:intergenic | 55.0% | |
| ACCTCCACCGCAACAATCAC+GGG | - | chr5.3:26583173-26583192 | None:intergenic | 55.0% | |
| ACGGCAACGGTTGTTGGAGA+GGG | - | chr5.3:26582028-26582047 | None:intergenic | 55.0% | |
| AGAAGTTTCCGCGTTGGAGG+AGG | + | chr5.3:26583340-26583359 | MS.gene066296:CDS | 55.0% | |
| AGGCGTGAACGTTCGGAGTT+TGG | - | chr5.3:26582226-26582245 | None:intergenic | 55.0% | |
| ATTGCGGCCCGTGATTGTTG+CGG | + | chr5.3:26583163-26583182 | MS.gene066296:CDS | 55.0% | |
| CAAACCGGTGGCTTCAACGA+CGG | + | chr5.3:26582195-26582214 | MS.gene066296:CDS | 55.0% | |
| CATTAAGAGATGGGGGCCCA+CGG | - | chr5.3:26583463-26583482 | None:intergenic | 55.0% | |
| CCGTTACAACCCTCACGACA+TGG | + | chr5.3:26582044-26582063 | MS.gene066296:CDS | 55.0% | |
| CGTGAGGGTTGTAACGGCAA+CGG | - | chr5.3:26582041-26582060 | None:intergenic | 55.0% | |
| CTCACGCGAGATTCCAATCC+TGG | + | chr5.3:26582435-26582454 | MS.gene066296:CDS | 55.0% | |
| CTCGCATAATCAAACGCGCC+GGG | - | chr5.3:26582711-26582730 | None:intergenic | 55.0% | |
| CTCTTAATGTGGCCCCACCT+GGG | + | chr5.3:26583474-26583493 | MS.gene066296:CDS | 55.0% | |
| GAACGGTGCAGCGAATGGTA+CGG | + | chr5.3:26582878-26582897 | MS.gene066296:CDS | 55.0% | |
| GAGGACAAGGCGTGAACGTT+CGG | - | chr5.3:26582233-26582252 | None:intergenic | 55.0% | |
| GGCCGCAATGTGTCCAAATC+CGG | - | chr5.3:26583152-26583171 | None:intergenic | 55.0% | |
| GGCCGGATTTGGACACATTG+CGG | + | chr5.3:26583147-26583166 | MS.gene066296:CDS | 55.0% | |
| GGGGCCACATTAAGAGATGG+GGG | - | chr5.3:26583470-26583489 | None:intergenic | 55.0% | |
| GGTGGGGCCACATTAAGAGA+TGG | - | chr5.3:26583473-26583492 | None:intergenic | 55.0% | |
| GTAACCGTCGTTGAAGCCAC+CGG | - | chr5.3:26582202-26582221 | None:intergenic | 55.0% | |
| GTTGGAGAGGGAGATGTTGG+AGG | - | chr5.3:26582016-26582035 | None:intergenic | 55.0% | |
| TAGCACCAGCGAGTACACCA+AGG | + | chr5.3:26582988-26583007 | MS.gene066296:CDS | 55.0% | |
| TAGTGACGTGGAACCGGAGT+GGG | + | chr5.3:26582782-26582801 | MS.gene066296:CDS | 55.0% | |
| TCTCTTAATGTGGCCCCACC+TGG | + | chr5.3:26583473-26583492 | MS.gene066296:CDS | 55.0% | |
| TGGAGGGACCGAAATCGGTT+CGG | - | chr5.3:26581999-26582018 | None:intergenic | 55.0% | |
| TGGGCCCCCATCTCTTAATG+TGG | + | chr5.3:26583463-26583482 | MS.gene066296:CDS | 55.0% | |
| TTAGTGACGTGGAACCGGAG+TGG | + | chr5.3:26582781-26582800 | MS.gene066296:CDS | 55.0% | |
| TTCGGGAGCTCATTAGGACC+GGG | + | chr5.3:26583404-26583423 | MS.gene066296:CDS | 55.0% | |
| TTGGGAAAATGCGGCGAACC+CGG | + | chr5.3:26582905-26582924 | MS.gene066296:CDS | 55.0% | |
| ! | CTGTGTTGTTGCCAGATGGC+AGG | + | chr5.3:26583027-26583046 | MS.gene066296:CDS | 55.0% |
| ! | GGTGGTGATGTCGTAGAGGA+TGG | - | chr5.3:26582097-26582116 | None:intergenic | 55.0% |
| ! | GGTTAAAGGACGGAGGGTGT+TGG | - | chr5.3:26582118-26582137 | None:intergenic | 55.0% |
| !! | GGCGAACCCGGTTTTGTATC+CGG | + | chr5.3:26582917-26582936 | MS.gene066296:CDS | 55.0% |
| !! | TAAAGGACGGAGGGTGTTGG+TGG | - | chr5.3:26582115-26582134 | None:intergenic | 55.0% |
| !! | TACGGCGGGTTGGGAAAATG+CGG | + | chr5.3:26582896-26582915 | MS.gene066296:CDS | 55.0% |
| ACCGGAGGAACACCAAGCGT+CGG | - | chr5.3:26582148-26582167 | None:intergenic | 60.0% | |
| TGGGTGGGAGTAACCCGCAT+CGG | + | chr5.3:26583057-26583076 | MS.gene066296:CDS | 60.0% | |
| ! | AGCGAATGGTACGGCGGGTT+GGG | + | chr5.3:26582887-26582906 | MS.gene066296:CDS | 60.0% |
| !! | ACCGACGCTTGGTGTTCCTC+CGG | + | chr5.3:26582144-26582163 | MS.gene066296:CDS | 60.0% |
| !! | CGTGGAACCGGAGTGGGTTA+TGG | + | chr5.3:26582788-26582807 | MS.gene066296:CDS | 60.0% |
| !! | GGAACCGGAGTGGGTTATGG+AGG | + | chr5.3:26582791-26582810 | MS.gene066296:CDS | 60.0% |
| ATATGCGGCGGCGCGTTTCC+CGG | + | chr5.3:26582690-26582709 | MS.gene066296:CDS | 65.0% | |
| CAGCGAATGGTACGGCGGGT+TGG | + | chr5.3:26582886-26582905 | MS.gene066296:CDS | 65.0% | |
| CGGTGCAGCGAATGGTACGG+CGG | + | chr5.3:26582881-26582900 | MS.gene066296:CDS | 65.0% | |
| GCCCGTGATTGTTGCGGTGG+AGG | + | chr5.3:26583169-26583188 | MS.gene066296:CDS | 65.0% | |
| GGTGCAGCGAATGGTACGGC+GGG | + | chr5.3:26582882-26582901 | MS.gene066296:CDS | 65.0% | |
| TCCGGCATGACACGTGGCAC+CGG | - | chr5.3:26582822-26582841 | None:intergenic | 65.0% | |
| GCGGCCCGTGATTGTTGCGG+TGG | + | chr5.3:26583166-26583185 | MS.gene066296:CDS | 70.0% | |
| TCCGGTGCAGTCTCCCCCAC+CGG | + | chr5.3:26582162-26582181 | MS.gene066296:CDS | 70.0% | |
| TCCGGTGGGGGAGACTGCAC+CGG | - | chr5.3:26582166-26582185 | None:intergenic | 70.0% | |
| !! | GCCGGTGCCACGTGTCATGC+CGG | + | chr5.3:26582818-26582837 | MS.gene066296:CDS | 70.0% |
| GGTGGGGGAGACTGCACCGG+AGG | - | chr5.3:26582163-26582182 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 26581952 | 26583562 | 26581952 | ID=MS.gene066296 |
| chr5.3 | mRNA | 26581952 | 26583562 | 26581952 | ID=MS.gene066296.t1;Parent=MS.gene066296 |
| chr5.3 | exon | 26581952 | 26583562 | 26581952 | ID=MS.gene066296.t1.exon1;Parent=MS.gene066296.t1 |
| chr5.3 | CDS | 26581952 | 26583562 | 26581952 | ID=cds.MS.gene066296.t1;Parent=MS.gene066296.t1 |
| Gene Sequence |
| Protein sequence |
