Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066404.t1 | XP_013467498.1 | 99.2 | 252 | 2 | 0 | 22 | 273 | 38 | 289 | 1.10E-133 | 486.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066404.t1 | Q9FL54 | 68.0 | 256 | 78 | 2 | 22 | 273 | 29 | 284 | 4.3e-91 | 335.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066404.t1 | A0A072VTU1 | 99.2 | 252 | 2 | 0 | 22 | 273 | 38 | 289 | 7.6e-134 | 486.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066404 | MS.gene51817 | PPI |
| MS.gene066404 | MS.gene95207 | PPI |
| MS.gene066404 | MS.gene057916 | PPI |
| MS.gene066404 | MS.gene50870 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066404.t1 | MTR_1g052110 | 97.070 | 273 | 3 | 1 | 1 | 273 | 22 | 289 | 0.0 | 540 |
| MS.gene066404.t1 | MTR_7g092380 | 78.261 | 253 | 54 | 1 | 10 | 262 | 10 | 261 | 5.37e-146 | 410 |
| MS.gene066404.t1 | MTR_7g109340 | 53.030 | 66 | 31 | 0 | 22 | 87 | 26 | 91 | 2.18e-15 | 75.5 |
| MS.gene066404.t1 | MTR_7g112360 | 49.296 | 71 | 31 | 3 | 24 | 90 | 18 | 87 | 3.39e-14 | 67.8 |
| MS.gene066404.t1 | MTR_7g112360 | 50.769 | 65 | 28 | 2 | 24 | 84 | 18 | 82 | 1.17e-13 | 67.8 |
| MS.gene066404.t1 | MTR_3g027580 | 52.308 | 65 | 31 | 0 | 23 | 87 | 90 | 154 | 1.78e-13 | 70.1 |
| MS.gene066404.t1 | MTR_2g014470 | 47.692 | 65 | 33 | 1 | 24 | 87 | 6 | 70 | 2.41e-13 | 69.3 |
| MS.gene066404.t1 | MTR_4g078850 | 49.231 | 65 | 32 | 1 | 24 | 87 | 6 | 70 | 4.85e-13 | 68.6 |
| MS.gene066404.t1 | MTR_3g108020 | 46.154 | 65 | 34 | 1 | 24 | 87 | 6 | 70 | 5.62e-13 | 68.2 |
| MS.gene066404.t1 | MTR_7g069480 | 53.125 | 64 | 29 | 1 | 24 | 87 | 29 | 91 | 7.95e-13 | 68.6 |
| MS.gene066404.t1 | MTR_4g023470 | 53.030 | 66 | 31 | 0 | 22 | 87 | 86 | 151 | 1.00e-12 | 68.2 |
| MS.gene066404.t1 | MTR_1g110310 | 37.963 | 108 | 61 | 2 | 12 | 113 | 6 | 113 | 1.18e-12 | 67.8 |
| MS.gene066404.t1 | MTR_3g087030 | 53.030 | 66 | 26 | 2 | 24 | 87 | 84 | 146 | 1.68e-12 | 67.4 |
| MS.gene066404.t1 | MTR_2g014480 | 41.573 | 89 | 45 | 3 | 24 | 108 | 6 | 91 | 2.00e-12 | 66.6 |
| MS.gene066404.t1 | MTR_8g022310 | 39.560 | 91 | 45 | 3 | 21 | 102 | 9 | 98 | 3.91e-12 | 64.3 |
| MS.gene066404.t1 | MTR_2g090705 | 47.692 | 65 | 33 | 1 | 24 | 87 | 6 | 70 | 4.44e-12 | 65.9 |
| MS.gene066404.t1 | MTR_8g022310 | 43.038 | 79 | 38 | 2 | 21 | 93 | 9 | 86 | 4.95e-12 | 64.3 |
| MS.gene066404.t1 | MTR_8g022310 | 43.038 | 79 | 38 | 2 | 21 | 93 | 9 | 86 | 5.60e-12 | 63.5 |
| MS.gene066404.t1 | MTR_8g037810 | 39.560 | 91 | 52 | 1 | 20 | 110 | 4 | 91 | 9.38e-12 | 64.7 |
| MS.gene066404.t1 | MTR_1g105540 | 39.130 | 92 | 50 | 3 | 19 | 110 | 32 | 117 | 1.38e-11 | 63.9 |
| MS.gene066404.t1 | MTR_5g035770 | 48.438 | 64 | 33 | 0 | 24 | 87 | 27 | 90 | 1.50e-11 | 64.3 |
| MS.gene066404.t1 | MTR_4g015840 | 44.615 | 65 | 35 | 1 | 24 | 87 | 6 | 70 | 1.53e-11 | 64.3 |
| MS.gene066404.t1 | MTR_8g022310 | 43.038 | 79 | 38 | 2 | 21 | 93 | 9 | 86 | 1.60e-11 | 63.2 |
| MS.gene066404.t1 | MTR_6g027110 | 48.485 | 66 | 29 | 1 | 24 | 84 | 4 | 69 | 2.24e-11 | 60.8 |
| MS.gene066404.t1 | MTR_2g104030 | 50.000 | 66 | 28 | 2 | 24 | 87 | 72 | 134 | 3.20e-11 | 63.5 |
| MS.gene066404.t1 | MTR_2g436560 | 36.634 | 101 | 45 | 3 | 9 | 93 | 77 | 174 | 3.63e-11 | 63.2 |
| MS.gene066404.t1 | MTR_5g004570 | 40.230 | 87 | 49 | 1 | 24 | 110 | 8 | 91 | 3.81e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066404.t1 | AT3G12170 | 69.444 | 252 | 74 | 1 | 11 | 262 | 3 | 251 | 5.54e-130 | 369 |
| MS.gene066404.t1 | AT3G12170 | 69.444 | 252 | 74 | 1 | 11 | 262 | 39 | 287 | 4.33e-129 | 368 |
| MS.gene066404.t1 | AT5G06910 | 66.418 | 268 | 83 | 3 | 10 | 273 | 20 | 284 | 1.35e-115 | 333 |
| MS.gene066404.t1 | AT3G62600 | 53.030 | 66 | 31 | 0 | 22 | 87 | 26 | 91 | 1.26e-14 | 73.2 |
| MS.gene066404.t1 | AT1G56300 | 47.826 | 69 | 32 | 2 | 20 | 84 | 11 | 79 | 2.43e-14 | 68.6 |
| MS.gene066404.t1 | AT1G56300 | 47.826 | 69 | 32 | 2 | 20 | 84 | 11 | 79 | 2.62e-14 | 69.3 |
| MS.gene066404.t1 | AT5G48030 | 51.351 | 74 | 36 | 0 | 14 | 87 | 86 | 159 | 4.70e-14 | 72.0 |
| MS.gene066404.t1 | AT5G01390 | 48.485 | 66 | 33 | 1 | 23 | 87 | 5 | 70 | 7.12e-14 | 69.7 |
| MS.gene066404.t1 | AT5G01390 | 48.485 | 66 | 33 | 1 | 23 | 87 | 5 | 70 | 7.33e-14 | 69.7 |
| MS.gene066404.t1 | AT1G59980 | 43.038 | 79 | 45 | 0 | 9 | 87 | 10 | 88 | 1.20e-13 | 70.5 |
| MS.gene066404.t1 | AT1G59980 | 43.038 | 79 | 45 | 0 | 9 | 87 | 10 | 88 | 1.32e-13 | 70.5 |
| MS.gene066404.t1 | AT5G03160 | 54.839 | 62 | 27 | 1 | 24 | 84 | 372 | 433 | 1.43e-13 | 70.5 |
| MS.gene066404.t1 | AT5G01390 | 48.485 | 66 | 33 | 1 | 23 | 87 | 5 | 70 | 1.54e-13 | 69.3 |
| MS.gene066404.t1 | AT5G01390 | 48.485 | 66 | 33 | 1 | 23 | 87 | 5 | 70 | 2.23e-13 | 69.7 |
| MS.gene066404.t1 | AT4G39150 | 51.562 | 64 | 31 | 0 | 24 | 87 | 8 | 71 | 5.32e-13 | 68.6 |
| MS.gene066404.t1 | AT4G39150 | 51.562 | 64 | 31 | 0 | 24 | 87 | 8 | 71 | 5.32e-13 | 68.6 |
| MS.gene066404.t1 | AT4G39150 | 51.562 | 64 | 31 | 0 | 24 | 87 | 8 | 71 | 5.32e-13 | 68.6 |
| MS.gene066404.t1 | AT2G21510 | 37.931 | 116 | 59 | 3 | 24 | 126 | 8 | 123 | 5.43e-13 | 68.6 |
| MS.gene066404.t1 | AT2G21510 | 37.931 | 116 | 59 | 3 | 24 | 126 | 8 | 123 | 5.43e-13 | 68.6 |
| MS.gene066404.t1 | AT1G68370 | 39.815 | 108 | 59 | 2 | 12 | 113 | 7 | 114 | 5.73e-13 | 68.6 |
| MS.gene066404.t1 | AT2G21510 | 37.931 | 116 | 59 | 3 | 24 | 126 | 8 | 123 | 6.91e-13 | 68.2 |
| MS.gene066404.t1 | AT2G21510 | 37.931 | 116 | 59 | 3 | 24 | 126 | 8 | 123 | 6.91e-13 | 68.2 |
| MS.gene066404.t1 | AT3G14200 | 48.649 | 74 | 35 | 1 | 14 | 84 | 4 | 77 | 6.94e-13 | 67.0 |
| MS.gene066404.t1 | AT4G39960 | 46.988 | 83 | 40 | 2 | 23 | 105 | 86 | 164 | 7.38e-13 | 68.6 |
| MS.gene066404.t1 | AT4G39960 | 46.988 | 83 | 40 | 2 | 23 | 105 | 86 | 164 | 7.38e-13 | 68.6 |
| MS.gene066404.t1 | AT4G28480 | 47.692 | 65 | 33 | 1 | 24 | 87 | 6 | 70 | 8.67e-13 | 67.4 |
| MS.gene066404.t1 | AT2G21510 | 37.931 | 116 | 59 | 3 | 24 | 126 | 8 | 123 | 9.12e-13 | 67.8 |
| MS.gene066404.t1 | AT3G08910 | 47.692 | 65 | 33 | 1 | 24 | 87 | 6 | 70 | 1.06e-12 | 67.4 |
| MS.gene066404.t1 | AT4G28480 | 47.692 | 65 | 33 | 1 | 24 | 87 | 6 | 70 | 1.30e-12 | 67.4 |
| MS.gene066404.t1 | AT5G25530 | 44.444 | 72 | 39 | 1 | 24 | 94 | 6 | 77 | 1.38e-12 | 67.4 |
| MS.gene066404.t1 | AT2G22360 | 54.545 | 66 | 25 | 2 | 24 | 87 | 88 | 150 | 1.52e-12 | 67.4 |
| MS.gene066404.t1 | AT1G76700 | 41.379 | 87 | 48 | 1 | 24 | 110 | 8 | 91 | 2.36e-12 | 67.0 |
| MS.gene066404.t1 | AT1G21080 | 47.059 | 68 | 36 | 0 | 20 | 87 | 4 | 71 | 5.62e-12 | 65.9 |
| MS.gene066404.t1 | AT1G21080 | 47.059 | 68 | 36 | 0 | 20 | 87 | 4 | 71 | 5.86e-12 | 65.9 |
| MS.gene066404.t1 | AT5G49060 | 44.000 | 75 | 37 | 2 | 21 | 93 | 98 | 169 | 5.90e-12 | 65.5 |
| MS.gene066404.t1 | AT5G49060 | 44.000 | 75 | 37 | 2 | 21 | 93 | 98 | 169 | 5.90e-12 | 65.5 |
| MS.gene066404.t1 | AT2G20560 | 44.615 | 65 | 35 | 1 | 24 | 87 | 6 | 70 | 9.74e-12 | 64.7 |
| MS.gene066404.t1 | AT3G08970 | 53.125 | 64 | 29 | 1 | 24 | 87 | 29 | 91 | 1.02e-11 | 65.1 |
| MS.gene066404.t1 | AT3G08970 | 53.125 | 64 | 29 | 1 | 24 | 87 | 29 | 91 | 1.02e-11 | 65.1 |
| MS.gene066404.t1 | AT1G59725 | 45.455 | 66 | 34 | 1 | 24 | 87 | 6 | 71 | 1.19e-11 | 64.3 |
| MS.gene066404.t1 | AT1G28210 | 47.541 | 61 | 32 | 0 | 24 | 84 | 50 | 110 | 5.01e-11 | 62.8 |
| MS.gene066404.t1 | AT1G28210 | 47.541 | 61 | 32 | 0 | 24 | 84 | 50 | 110 | 5.13e-11 | 62.8 |
| MS.gene066404.t1 | AT1G28210 | 47.541 | 61 | 32 | 0 | 24 | 84 | 50 | 110 | 5.33e-11 | 62.8 |
| MS.gene066404.t1 | AT3G17830 | 48.684 | 76 | 31 | 3 | 24 | 97 | 65 | 134 | 5.54e-11 | 63.2 |
| MS.gene066404.t1 | AT5G16650 | 43.284 | 67 | 38 | 0 | 24 | 90 | 13 | 79 | 8.30e-11 | 58.9 |
| MS.gene066404.t1 | AT1G24120 | 48.438 | 64 | 33 | 0 | 24 | 87 | 22 | 85 | 9.93e-11 | 62.0 |
Find 51 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATTTATTATTAGGTTCT+TGG | 0.271621 | 1.3:-36357341 | MS.gene066404:intron |
| AATCGGTGCGAGTCGAGTTT+AGG | 0.311498 | 1.3:+36354590 | None:intergenic |
| GAATTCCTCTTCAGAGGGTT+CGG | 0.312967 | 1.3:+36354000 | None:intergenic |
| AAAAGAAAGCGTACAAGAAA+TGG | 0.336249 | 1.3:-36354283 | MS.gene066404:CDS |
| TCTGAAAACCAGGACCTTGC+AGG | 0.336660 | 1.3:-36354964 | MS.gene066404:intron |
| GGAGTTTGAAGCAAACTATA+GGG | 0.361113 | 1.3:-36354781 | MS.gene066404:CDS |
| TCGTCTCTAATCTCAAAATA+TGG | 0.366431 | 1.3:-36354037 | MS.gene066404:CDS |
| TTACCTGGTAGAGTGAGTTT+TGG | 0.368593 | 1.3:+36357434 | None:intergenic |
| CGAGCTCTTTATGATGAAAC+TGG | 0.370711 | 1.3:-36355893 | MS.gene066404:CDS |
| AGGAGTTTGAAGCAAACTAT+AGG | 0.376480 | 1.3:-36354782 | MS.gene066404:CDS |
| AAAGAAGGCGTATCACAAAT+TGG | 0.377076 | 1.3:-36357288 | MS.gene066404:CDS |
| TCATCACCAGGATTCTTATC+AGG | 0.385427 | 1.3:+36357251 | None:intergenic |
| ATTGATGAGGCTATAACTTC+TGG | 0.386537 | 1.3:-36354557 | MS.gene066404:intron |
| ACTCGACTCGCACCGATTCA+AGG | 0.388457 | 1.3:-36354585 | MS.gene066404:CDS |
| AATTCCTCTTCAGAGGGTTC+GGG | 0.389041 | 1.3:+36354001 | None:intergenic |
| CAAAATGTTATCTCCATTCT+CGG | 0.394188 | 1.3:-36355929 | MS.gene066404:CDS |
| AATCTTCTACAGATCAAGTA+AGG | 0.435909 | 1.3:-36354134 | MS.gene066404:intron |
| CCTTGCAGGAGATGTAGTTC+AGG | 0.442757 | 1.3:-36354950 | MS.gene066404:CDS |
| CTTCAGAGGGTTCGGGCACA+TGG | 0.444877 | 1.3:+36354008 | None:intergenic |
| AAAATGTTATCTCCATTCTC+GGG | 0.461779 | 1.3:-36355928 | MS.gene066404:CDS |
| AATGCAAGGGTAATATGAAC+AGG | 0.467520 | 1.3:-36354716 | MS.gene066404:intron |
| TAAAGGACTAGTTGGCGGCT+TGG | 0.473285 | 1.3:+36354241 | None:intergenic |
| TGATTTAATTAGACTTTACA+AGG | 0.489056 | 1.3:-36354739 | MS.gene066404:CDS |
| CTTCGTAAAGGACTAGTTGG+CGG | 0.491008 | 1.3:+36354236 | None:intergenic |
| TATATCTGCAGGAGAACTAA+AGG | 0.492660 | 1.3:-36354306 | MS.gene066404:intron |
| AAAGAAAGCGTACAAGAAAT+GGG | 0.493039 | 1.3:-36354282 | MS.gene066404:CDS |
| CATCAATAATATCCTTGAAT+CGG | 0.494545 | 1.3:+36354573 | None:intergenic |
| TTCCTTCGTAAAGGACTAGT+TGG | 0.496942 | 1.3:+36354233 | None:intergenic |
| CTTCATCCTGATAAGAATCC+TGG | 0.503078 | 1.3:-36357257 | MS.gene066404:CDS |
| GCTTCGAATTCCTCTTCAGA+GGG | 0.517725 | 1.3:+36353995 | None:intergenic |
| CAAGTTGGTTACTTTCGCCT+AGG | 0.529009 | 1.3:+36353932 | None:intergenic |
| TTTCAGAACATTGTACAAGA+AGG | 0.533814 | 1.3:-36354914 | MS.gene066404:intron |
| TAGACTTTACAAGGAATGCA+AGG | 0.538206 | 1.3:-36354730 | MS.gene066404:CDS |
| ACGAGAACATAGAATCAAAC+CGG | 0.544920 | 1.3:+36354056 | None:intergenic |
| AAACCAAAACTCACTCTACC+AGG | 0.561284 | 1.3:-36357437 | MS.gene066404:intron |
| AGCTTCGAATTCCTCTTCAG+AGG | 0.566300 | 1.3:+36353994 | None:intergenic |
| GGTCACTGAAGCTGATATTG+AGG | 0.567799 | 1.3:-36354802 | MS.gene066404:CDS |
| ATTCAAGGATATTATTGATG+AGG | 0.571989 | 1.3:-36354570 | MS.gene066404:CDS |
| AACTAAACAAGAAATAAAGA+AGG | 0.573873 | 1.3:-36357303 | MS.gene066404:CDS |
| TCTCTAATCTCAAAATATGG+TGG | 0.580345 | 1.3:-36354034 | MS.gene066404:CDS |
| GACGAGATGAGAGGAAAGAC+CGG | 0.588828 | 1.3:-36354075 | MS.gene066404:CDS |
| TTATTATTAGGTTCTTGGTG+TGG | 0.593713 | 1.3:-36357336 | MS.gene066404:intron |
| TGTGCCCGAACCCTCTGAAG+AGG | 0.595257 | 1.3:-36354005 | MS.gene066404:CDS |
| AGACTTTACAAGGAATGCAA+GGG | 0.606865 | 1.3:-36354729 | MS.gene066404:CDS |
| TATCAAAACGACGAGATGAG+AGG | 0.612573 | 1.3:-36354084 | MS.gene066404:CDS |
| GAGAGACTGACCTCATCACC+AGG | 0.614130 | 1.3:+36357239 | None:intergenic |
| TGATAAGAATCCTGGTGATG+AGG | 0.623122 | 1.3:-36357249 | MS.gene066404:intron |
| GAGTTTGAAGCAAACTATAG+GGG | 0.637373 | 1.3:-36354780 | MS.gene066404:CDS |
| AAATGTTATCTCCATTCTCG+GGG | 0.645657 | 1.3:-36355927 | MS.gene066404:CDS |
| CGCCAACTAGTCCTTTACGA+AGG | 0.677178 | 1.3:-36354235 | MS.gene066404:CDS |
| CCTGAACTACATCTCCTGCA+AGG | 0.687635 | 1.3:+36354950 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTTGAAAACT+CGG | - | chr1.3:36354674-36354693 | MS.gene066404:intron | 10.0% |
| !!! | CTATTTTATCAAATTATTAT+TGG | - | chr1.3:36354531-36354550 | MS.gene066404:intron | 10.0% |
| !! | AAAAAAAAAAATAACCCATT+CGG | + | chr1.3:36354883-36354902 | None:intergenic | 15.0% |
| !! | TAATTAGAAATGTTAAAGTA+AGG | + | chr1.3:36354025-36354044 | None:intergenic | 15.0% |
| !! | TATGTGAATGATTTATTATT+AGG | - | chr1.3:36354082-36354101 | MS.gene066404:CDS | 15.0% |
| !! | TTAATAAAGTCATTATACAA+TGG | + | chr1.3:36355654-36355673 | None:intergenic | 15.0% |
| !!! | TTTCGTTTATTTTTTGTTAA+GGG | - | chr1.3:36355320-36355339 | MS.gene066404:intron | 15.0% |
| !! | AAAAAAAAAATAACCCATTC+GGG | + | chr1.3:36354882-36354901 | None:intergenic | 20.0% |
| !! | AACTAAACAAGAAATAAAGA+AGG | - | chr1.3:36354127-36354146 | MS.gene066404:intron | 20.0% |
| !! | ATGATTTATTATTAGGTTCT+TGG | - | chr1.3:36354089-36354108 | MS.gene066404:CDS | 20.0% |
| !! | ATTTATTTATATCAAAGGCA+AGG | - | chr1.3:36356037-36356056 | MS.gene066404:intron | 20.0% |
| !! | TATTCTGCATATTAATAGAT+AGG | - | chr1.3:36357054-36357073 | MS.gene066404:intron | 20.0% |
| !! | TGATTTAATTAGACTTTACA+AGG | - | chr1.3:36356691-36356710 | MS.gene066404:intron | 20.0% |
| !!! | AATATTTCACTTTTGTTTGA+TGG | - | chr1.3:36357080-36357099 | MS.gene066404:intron | 20.0% |
| !!! | AATATTTTGATGAGTAAAAC+CGG | - | chr1.3:36356743-36356762 | MS.gene066404:intron | 20.0% |
| !!! | AGTGTTTCATTTTAATATTG+TGG | + | chr1.3:36354938-36354957 | None:intergenic | 20.0% |
| !!! | GTGTTTCATTTTAATATTGT+GGG | + | chr1.3:36354937-36354956 | None:intergenic | 20.0% |
| !!! | GTTTCGTTTATTTTTTGTTA+AGG | - | chr1.3:36355319-36355338 | MS.gene066404:intron | 20.0% |
| !!! | TATACAATGGTCTTTTTTTA+GGG | + | chr1.3:36355641-36355660 | None:intergenic | 20.0% |
| !!! | TTATACAATGGTCTTTTTTT+AGG | + | chr1.3:36355642-36355661 | None:intergenic | 20.0% |
| !!! | TTTTGATTGGTAATATTTGA+AGG | + | chr1.3:36355600-36355619 | None:intergenic | 20.0% |
| ! | AAAAAAAAATAACCCATTCG+GGG | + | chr1.3:36354881-36354900 | None:intergenic | 25.0% |
| ! | AAAATGTCATATTCTTGTAC+TGG | + | chr1.3:36354648-36354667 | None:intergenic | 25.0% |
| ! | AATACAAAAAATTGCAACTG+AGG | + | chr1.3:36354418-36354437 | None:intergenic | 25.0% |
| ! | ATGATCAAATATTGAAGCTT+GGG | - | chr1.3:36355756-36355775 | MS.gene066404:intron | 25.0% |
| ! | ATTCAAGGATATTATTGATG+AGG | - | chr1.3:36356860-36356879 | MS.gene066404:intron | 25.0% |
| ! | CAGTTAACATCAAAATACTA+CGG | + | chr1.3:36355179-36355198 | None:intergenic | 25.0% |
| ! | CATCAATAATATCCTTGAAT+CGG | + | chr1.3:36356860-36356879 | None:intergenic | 25.0% |
| ! | CTAAGAATAGAAGAAAATGT+TGG | - | chr1.3:36356204-36356223 | MS.gene066404:intron | 25.0% |
| ! | GTGTTAAAATATTAAGTTCC+TGG | + | chr1.3:36355906-36355925 | None:intergenic | 25.0% |
| ! | TAGAAAGTAGTGTATGTTAT+TGG | - | chr1.3:36356081-36356100 | MS.gene066404:intron | 25.0% |
| ! | TATCAGTGAAAATAACCATA+AGG | + | chr1.3:36355207-36355226 | None:intergenic | 25.0% |
| ! | TATGAGTAAGTACACATTAT+GGG | - | chr1.3:36354981-36355000 | MS.gene066404:intron | 25.0% |
| !! | ACTTTGTAATTTGTGCTAAT+AGG | - | chr1.3:36356607-36356626 | MS.gene066404:intron | 25.0% |
| !!! | AGAATATTTCTAGCTTTTGT+TGG | - | chr1.3:36356898-36356917 | MS.gene066404:intron | 25.0% |
| !!! | ATTGCTTTTGTTAGTTTTAC+TGG | - | chr1.3:36356177-36356196 | MS.gene066404:intron | 25.0% |
| !!! | ATTTTGTTCAATGCTTTGTT+CGG | - | chr1.3:36356815-36356834 | MS.gene066404:intron | 25.0% |
| !!! | CAATATACAATGGTTTTGAT+TGG | + | chr1.3:36355613-36355632 | None:intergenic | 25.0% |
| !!! | TCAGTTGCAATTTTTTGTAT+TGG | - | chr1.3:36354417-36354436 | MS.gene066404:intron | 25.0% |
| AAAATGTTATCTCCATTCTC+GGG | - | chr1.3:36355502-36355521 | MS.gene066404:intron | 30.0% | |
| AACTAACAAAAGCAATACCA+TGG | + | chr1.3:36356173-36356192 | None:intergenic | 30.0% | |
| AATATTGTGGGTGAAAATTG+TGG | + | chr1.3:36354925-36354944 | None:intergenic | 30.0% | |
| AATCTTCTACAGATCAAGTA+AGG | - | chr1.3:36357296-36357315 | MS.gene066404:CDS | 30.0% | |
| AATGTAGCTACATAACAAGT+TGG | + | chr1.3:36354502-36354521 | None:intergenic | 30.0% | |
| AATGTGTACTTACTCATACT+GGG | + | chr1.3:36354979-36354998 | None:intergenic | 30.0% | |
| ATGTTAACTGTAACACCTTA+TGG | - | chr1.3:36355189-36355208 | MS.gene066404:intron | 30.0% | |
| ATGTTACATAGGTACAGTTA+TGG | - | chr1.3:36354602-36354621 | MS.gene066404:CDS | 30.0% | |
| ATTTATATCAAAGGCAAGGT+AGG | - | chr1.3:36356041-36356060 | MS.gene066404:intron | 30.0% | |
| CAAAATGTTATCTCCATTCT+CGG | - | chr1.3:36355501-36355520 | MS.gene066404:intron | 30.0% | |
| CTAGTCATGACAATTAAAAC+TGG | - | chr1.3:36355966-36355985 | MS.gene066404:intron | 30.0% | |
| GATGATCAAATATTGAAGCT+TGG | - | chr1.3:36355755-36355774 | MS.gene066404:intron | 30.0% | |
| GTATGAGTAAGTACACATTA+TGG | - | chr1.3:36354980-36354999 | MS.gene066404:intron | 30.0% | |
| TAACTGTACCTATGTAACAT+AGG | + | chr1.3:36354602-36354621 | None:intergenic | 30.0% | |
| TAAGTTTATCAAGCAGAGTT+TGG | - | chr1.3:36357227-36357246 | MS.gene066404:intron | 30.0% | |
| TAATGTGTACTTACTCATAC+TGG | + | chr1.3:36354980-36354999 | None:intergenic | 30.0% | |
| TAGGGAAAGTCAATATACAA+TGG | + | chr1.3:36355623-36355642 | None:intergenic | 30.0% | |
| TCACCAAGTTCAAAAGAAAA+CGG | - | chr1.3:36357003-36357022 | MS.gene066404:intron | 30.0% | |
| TCGTCTCTAATCTCAAAATA+TGG | - | chr1.3:36357393-36357412 | MS.gene066404:intron | 30.0% | |
| TCTCTAATCTCAAAATATGG+TGG | - | chr1.3:36357396-36357415 | MS.gene066404:intron | 30.0% | |
| TGAACAAAATAACCTGCAAA+GGG | + | chr1.3:36356805-36356824 | None:intergenic | 30.0% | |
| TGATCAAATATTGAAGCTTG+GGG | - | chr1.3:36355757-36355776 | MS.gene066404:intron | 30.0% | |
| TGTTATTGGCACTTTAATGT+AGG | - | chr1.3:36357253-36357272 | MS.gene066404:CDS | 30.0% | |
| TTATTATTAGGTTCTTGGTG+TGG | - | chr1.3:36354094-36354113 | MS.gene066404:CDS | 30.0% | |
| TTGAACAAAATAACCTGCAA+AGG | + | chr1.3:36356806-36356825 | None:intergenic | 30.0% | |
| TTTATATCAAAGGCAAGGTA+GGG | - | chr1.3:36356042-36356061 | MS.gene066404:intron | 30.0% | |
| TTTCAGAACATTGTACAAGA+AGG | - | chr1.3:36356516-36356535 | MS.gene066404:intron | 30.0% | |
| ! | AAAAGAAAGCGTACAAGAAA+TGG | - | chr1.3:36357147-36357166 | MS.gene066404:intron | 30.0% |
| ! | AAACTGACAATTTGCTTAAC+AGG | + | chr1.3:36356007-36356026 | None:intergenic | 30.0% |
| ! | AAAGAAAGCGTACAAGAAAT+GGG | - | chr1.3:36357148-36357167 | MS.gene066404:intron | 30.0% |
| ! | ATAGCATACAGATCTGTTTT+TGG | + | chr1.3:36357324-36357343 | None:intergenic | 30.0% |
| ! | ATGTTTAGATCTTTTTGCTC+TGG | - | chr1.3:36356314-36356333 | MS.gene066404:intron | 30.0% |
| ! | ATTTTGCAATTGCTGAAACT+TGG | + | chr1.3:36355487-36355506 | None:intergenic | 30.0% |
| ! | GAACGAAATATTGTCATTTC+AGG | - | chr1.3:36356388-36356407 | MS.gene066404:intron | 30.0% |
| ! | TCTTTTATATTAGTGACAGC+TGG | + | chr1.3:36356955-36356974 | None:intergenic | 30.0% |
| ! | TTGTTCCTTGTTTCATTTAC+AGG | - | chr1.3:36355452-36355471 | MS.gene066404:intron | 30.0% |
| ! | TTTAGTGTCTCTGTCAATTT+TGG | - | chr1.3:36354561-36354580 | MS.gene066404:CDS | 30.0% |
| !! | AATTTTGGTACCTGTTTGTT+AGG | - | chr1.3:36354576-36354595 | MS.gene066404:CDS | 30.0% |
| !! | CGTATTTATTTCTGAAAACC+AGG | - | chr1.3:36356456-36356475 | MS.gene066404:intron | 30.0% |
| !! | GTTACTGTAATTTTAGGTCT+CGG | - | chr1.3:36354234-36354253 | MS.gene066404:CDS | 30.0% |
| !! | TTACTGTAATTTTAGGTCTC+GGG | - | chr1.3:36354235-36354254 | MS.gene066404:CDS | 30.0% |
| AAATGTTATCTCCATTCTCG+GGG | - | chr1.3:36355503-36355522 | MS.gene066404:intron | 35.0% | |
| AATGCAAGGGTAATATGAAC+AGG | - | chr1.3:36356714-36356733 | MS.gene066404:intron | 35.0% | |
| ACGAGAACATAGAATCAAAC+CGG | + | chr1.3:36357377-36357396 | None:intergenic | 35.0% | |
| AGACTTTACAAGGAATGCAA+GGG | - | chr1.3:36356701-36356720 | MS.gene066404:intron | 35.0% | |
| AGCTTCCTGTAAATGAAACA+AGG | + | chr1.3:36355460-36355479 | None:intergenic | 35.0% | |
| ATCAAATATTGAAGCTTGGG+GGG | - | chr1.3:36355759-36355778 | MS.gene066404:intron | 35.0% | |
| ATCAACAACAACAACAACGA+CGG | - | chr1.3:36353955-36353974 | MS.gene066404:CDS | 35.0% | |
| ATTGATGAGGCTATAACTTC+TGG | - | chr1.3:36356873-36356892 | MS.gene066404:intron | 35.0% | |
| CATCAAAATACTACGGTTAC+AGG | + | chr1.3:36355172-36355191 | None:intergenic | 35.0% | |
| CTTGTTTCAACACTATGACA+CGG | + | chr1.3:36355735-36355754 | None:intergenic | 35.0% | |
| GATCAAATATTGAAGCTTGG+GGG | - | chr1.3:36355758-36355777 | MS.gene066404:intron | 35.0% | |
| GGGAATATCAAAGTCAAAAC+TGG | + | chr1.3:36356785-36356804 | None:intergenic | 35.0% | |
| GTTAAAGTAAGGTAGTTACC+TGG | + | chr1.3:36354014-36354033 | None:intergenic | 35.0% | |
| TAGACTTTACAAGGAATGCA+AGG | - | chr1.3:36356700-36356719 | MS.gene066404:intron | 35.0% | |
| TATATCTGCAGGAGAACTAA+AGG | - | chr1.3:36357124-36357143 | MS.gene066404:intron | 35.0% | |
| TCGCAAACAAAGAAACACTT+TGG | + | chr1.3:36355293-36355312 | None:intergenic | 35.0% | |
| TGGAATCCATAACAAAAAGC+CGG | + | chr1.3:36356765-36356784 | None:intergenic | 35.0% | |
| TTGTTAGGCCTATGTTACAT+AGG | - | chr1.3:36354591-36354610 | MS.gene066404:CDS | 35.0% | |
| ! | AAAGAAGGCGTATCACAAAT+TGG | - | chr1.3:36354142-36354161 | MS.gene066404:intron | 35.0% |
| ! | AGGAGTTTGAAGCAAACTAT+AGG | - | chr1.3:36356648-36356667 | MS.gene066404:intron | 35.0% |
| ! | CTTCCGTTTTCTTTTGAACT+TGG | + | chr1.3:36357009-36357028 | None:intergenic | 35.0% |
| ! | GAGTTTGAAGCAAACTATAG+GGG | - | chr1.3:36356650-36356669 | MS.gene066404:intron | 35.0% |
| ! | GGAGTTTGAAGCAAACTATA+GGG | - | chr1.3:36356649-36356668 | MS.gene066404:intron | 35.0% |
| ! | GTGTATGTTATTGGTTGAGT+TGG | - | chr1.3:36356090-36356109 | MS.gene066404:intron | 35.0% |
| ! | TACTTTTGCTTCCTTCGTAA+AGG | + | chr1.3:36357209-36357228 | None:intergenic | 35.0% |
| !! | ACTAAGTTCTGAAGTTGTGT+TGG | - | chr1.3:36355820-36355839 | MS.gene066404:intron | 35.0% |
| !! | ATGTTATTGGTTGAGTTGGT+TGG | - | chr1.3:36356094-36356113 | MS.gene066404:intron | 35.0% |
| !! | CGCTGTGTTACTGTAATTTT+AGG | - | chr1.3:36354228-36354247 | MS.gene066404:CDS | 35.0% |
| !! | CTACATAACAAGTTGGTCTA+GGG | + | chr1.3:36354495-36354514 | None:intergenic | 35.0% |
| !! | CTGAAGTTGTGTTGGTATTT+TGG | - | chr1.3:36355828-36355847 | MS.gene066404:intron | 35.0% |
| !! | GTAAAACCGGCTTTTTGTTA+TGG | - | chr1.3:36356756-36356775 | MS.gene066404:intron | 35.0% |
| !! | TTTAGTTCTCCTGCAGATAT+AGG | + | chr1.3:36357125-36357144 | None:intergenic | 35.0% |
| !!! | AGGATATTTTAGCATTGTCC+TGG | - | chr1.3:36356408-36356427 | MS.gene066404:intron | 35.0% |
| !!! | CGATTAGTTGGTTTTTGACT+CGG | - | chr1.3:36354352-36354371 | MS.gene066404:intron | 35.0% |
| !!! | GAGTGAGTTTTGGTTTTGAT+CGG | + | chr1.3:36353989-36354008 | None:intergenic | 35.0% |
| !!! | TAGGCTTTTTTGAGGATCTT+CGG | + | chr1.3:36357482-36357501 | None:intergenic | 35.0% |
| AAACCAAAACTCACTCTACC+AGG | - | chr1.3:36353993-36354012 | MS.gene066404:CDS | 40.0% | |
| AAGCATGGGTACTTGTGAAA+AGG | + | chr1.3:36355014-36355033 | None:intergenic | 40.0% | |
| ACACAGAGATTGTTGGCAAT+TGG | + | chr1.3:36354271-36354290 | None:intergenic | 40.0% | |
| ATGCCTACATCTCTGAGTAT+AGG | + | chr1.3:36355251-36355270 | None:intergenic | 40.0% | |
| CACAGAGATTGTTGGCAATT+GGG | + | chr1.3:36354270-36354289 | None:intergenic | 40.0% | |
| CCAAGAATCGACTAATCTGA+GGG | - | chr1.3:36354705-36354724 | MS.gene066404:intron | 40.0% | |
| CGAAGCTACACAGAAAAAGA+TGG | - | chr1.3:36357452-36357471 | MS.gene066404:CDS | 40.0% | |
| CGAGCTCTTTATGATGAAAC+TGG | - | chr1.3:36355537-36355556 | MS.gene066404:intron | 40.0% | |
| CTTCATCCTGATAAGAATCC+TGG | - | chr1.3:36354173-36354192 | MS.gene066404:intron | 40.0% | |
| GAAGATCCTCAAAAAAGCCT+AGG | - | chr1.3:36357481-36357500 | MS.gene066404:CDS | 40.0% | |
| GACTTTGATATTCCCTTTGC+AGG | - | chr1.3:36356790-36356809 | MS.gene066404:intron | 40.0% | |
| GTAACATAGGCCTAACAAAC+AGG | + | chr1.3:36354589-36354608 | None:intergenic | 40.0% | |
| TATCAAAACGACGAGATGAG+AGG | - | chr1.3:36357346-36357365 | MS.gene066404:intron | 40.0% | |
| TCATCACCAGGATTCTTATC+AGG | + | chr1.3:36354182-36354201 | None:intergenic | 40.0% | |
| TCCAAGAATCGACTAATCTG+AGG | - | chr1.3:36354704-36354723 | MS.gene066404:intron | 40.0% | |
| TGAAAACAATGCAACAAGCC+AGG | - | chr1.3:36355885-36355904 | MS.gene066404:CDS | 40.0% | |
| TGCCTACATCTCTGAGTATA+GGG | + | chr1.3:36355250-36355269 | None:intergenic | 40.0% | |
| TGCTCTGGTAACTGTAGTTA+AGG | - | chr1.3:36356329-36356348 | MS.gene066404:intron | 40.0% | |
| TTGCCAACAATCTCTGTGTT+CGG | - | chr1.3:36354272-36354291 | MS.gene066404:CDS | 40.0% | |
| ! | ATTCCCTCTGGTGTCAATTT+CGG | + | chr1.3:36354800-36354819 | None:intergenic | 40.0% |
| ! | CGTGTCATAGTGTTGAAACA+AGG | - | chr1.3:36355733-36355752 | MS.gene066404:intron | 40.0% |
| ! | CTTCAAAGGTTCTGACAAGT+GGG | - | chr1.3:36355031-36355050 | MS.gene066404:intron | 40.0% |
| ! | TGATAAGAATCCTGGTGATG+AGG | - | chr1.3:36354181-36354200 | MS.gene066404:intron | 40.0% |
| ! | TTACCTGGTAGAGTGAGTTT+TGG | + | chr1.3:36353999-36354018 | None:intergenic | 40.0% |
| ! | TTCCTTCGTAAAGGACTAGT+TGG | + | chr1.3:36357200-36357219 | None:intergenic | 40.0% |
| ! | TTTTTCTTCATCCCCGAGAA+TGG | + | chr1.3:36355517-36355536 | None:intergenic | 40.0% |
| !! | GCAGAGTTTGGCTTTGTTAT+TGG | - | chr1.3:36357239-36357258 | MS.gene066404:intron | 40.0% |
| !! | GCTACATAACAAGTTGGTCT+AGG | + | chr1.3:36354496-36354515 | None:intergenic | 40.0% |
| !! | GCTTGTTTTCCTATATCTGC+AGG | - | chr1.3:36357113-36357132 | MS.gene066404:intron | 40.0% |
| !! | TGAGTTGGTTGGTTGTGAAA+GGG | - | chr1.3:36356105-36356124 | MS.gene066404:intron | 40.0% |
| !! | TGGCCCTGATGTTTGTTTTT+GGG | - | chr1.3:36355084-36355103 | MS.gene066404:intron | 40.0% |
| !! | TGTCAGAACCTTTGAAGCAT+GGG | + | chr1.3:36355028-36355047 | None:intergenic | 40.0% |
| !! | TTGAGTTGGTTGGTTGTGAA+AGG | - | chr1.3:36356104-36356123 | MS.gene066404:intron | 40.0% |
| !! | TTGGCCCTGATGTTTGTTTT+TGG | - | chr1.3:36355083-36355102 | MS.gene066404:intron | 40.0% |
| !! | TTGTCAGAACCTTTGAAGCA+TGG | + | chr1.3:36355029-36355048 | None:intergenic | 40.0% |
| !!! | GTTTTGGTTTTGATCGGAAC+TGG | + | chr1.3:36353983-36354002 | None:intergenic | 40.0% |
| AAAACCCTTGAACCGTACCA+TGG | + | chr1.3:36355138-36355157 | None:intergenic | 45.0% | |
| AAAATGCAGCTCAAGTGGTG+TGG | + | chr1.3:36355408-36355427 | None:intergenic | 45.0% | |
| AAACCCTTGAACCGTACCAT+GGG | + | chr1.3:36355137-36355156 | None:intergenic | 45.0% | |
| AAGATCCCAAGCCAACCATT+AGG | - | chr1.3:36354851-36354870 | MS.gene066404:intron | 45.0% | |
| AATTCCTCTTCAGAGGGTTC+GGG | + | chr1.3:36357432-36357451 | None:intergenic | 45.0% | |
| ACACCTGACAGAGTTTGACA+AGG | + | chr1.3:36355374-36355393 | None:intergenic | 45.0% | |
| ACCACAAAATGCAGCTCAAG+TGG | + | chr1.3:36355413-36355432 | None:intergenic | 45.0% | |
| ACCGAGAACAAGCGTATACA+AGG | + | chr1.3:36356580-36356599 | None:intergenic | 45.0% | |
| ACCTGACAGAGTTTGACAAG+GGG | + | chr1.3:36355372-36355391 | None:intergenic | 45.0% | |
| ACTCATACTGGGTACGAGTA+CGG | + | chr1.3:36354968-36354987 | None:intergenic | 45.0% | |
| AGCTTCGAATTCCTCTTCAG+AGG | + | chr1.3:36357439-36357458 | None:intergenic | 45.0% | |
| AGGCATACTTGTCCGCAATT+CGG | - | chr1.3:36355265-36355284 | MS.gene066404:intron | 45.0% | |
| AGTTTGACAAGGGGGCTATA+AGG | + | chr1.3:36355363-36355382 | None:intergenic | 45.0% | |
| CACAAGTACCCATGCTTCAA+AGG | - | chr1.3:36355017-36355036 | MS.gene066404:intron | 45.0% | |
| CACCTGACAGAGTTTGACAA+GGG | + | chr1.3:36355373-36355392 | None:intergenic | 45.0% | |
| GAATTCCTCTTCAGAGGGTT+CGG | + | chr1.3:36357433-36357452 | None:intergenic | 45.0% | |
| GCCCCCAAAAACAAACATCA+GGG | + | chr1.3:36355090-36355109 | None:intergenic | 45.0% | |
| GCCTTGTATACGCTTGTTCT+CGG | - | chr1.3:36356576-36356595 | MS.gene066404:intron | 45.0% | |
| GCTTCGAATTCCTCTTCAGA+GGG | + | chr1.3:36357438-36357457 | None:intergenic | 45.0% | |
| GGTCACTGAAGCTGATATTG+AGG | - | chr1.3:36356628-36356647 | MS.gene066404:intron | 45.0% | |
| GTCCCTATACTCAGAGATGT+AGG | - | chr1.3:36355245-36355264 | MS.gene066404:intron | 45.0% | |
| TATTGGACGGTGCGATTAGT+TGG | - | chr1.3:36354340-36354359 | MS.gene066404:intron | 45.0% | |
| TCAAAGGCAAGGTAGGGAAA+AGG | - | chr1.3:36356048-36356067 | MS.gene066404:intron | 45.0% | |
| TGAAGTTGCAAAGCCCTGTA+TGG | + | chr1.3:36354303-36354322 | None:intergenic | 45.0% | |
| ! | ACAAGCGTATACAAGGCACT+AGG | + | chr1.3:36356573-36356592 | None:intergenic | 45.0% |
| ! | ACCACTTGAGCTGCATTTTG+TGG | - | chr1.3:36355409-36355428 | MS.gene066404:intron | 45.0% |
| ! | CCCTCAGATTAGTCGATTCT+TGG | + | chr1.3:36354708-36354727 | None:intergenic | 45.0% |
| ! | GCTTCAAAGGTTCTGACAAG+TGG | - | chr1.3:36355030-36355049 | MS.gene066404:intron | 45.0% |
| !! | AACACTTTGGTGCCGAATTG+CGG | + | chr1.3:36355280-36355299 | None:intergenic | 45.0% |
| !! | AGCTTGCTCTGGCTTTAAAC+GGG | + | chr1.3:36354759-36354778 | None:intergenic | 45.0% |
| !! | CTTCGTAAAGGACTAGTTGG+CGG | + | chr1.3:36357197-36357216 | None:intergenic | 45.0% |
| !! | GAGCTTGCTCTGGCTTTAAA+CGG | + | chr1.3:36354760-36354779 | None:intergenic | 45.0% |
| !! | GTTGACCTAATGGTTGGCTT+GGG | + | chr1.3:36354859-36354878 | None:intergenic | 45.0% |
| !! | TAATGGTTGGCTTGGGATCT+TGG | + | chr1.3:36354852-36354871 | None:intergenic | 45.0% |
| !!! | CAAGTGGTGTGGTTTTAGCT+AGG | + | chr1.3:36355397-36355416 | None:intergenic | 45.0% |
| !!! | CTTTCGCCTAGGCTTTTTTG+AGG | + | chr1.3:36357490-36357509 | None:intergenic | 45.0% |
| !!! | GCCCTGATGTTTGTTTTTGG+GGG | - | chr1.3:36355086-36355105 | MS.gene066404:intron | 45.0% |
| !!! | GGCCCTGATGTTTGTTTTTG+GGG | - | chr1.3:36355085-36355104 | MS.gene066404:intron | 45.0% |
| !! | TATTTATTTATTTATATCAA+AGG | - | chr1.3:36356032-36356051 | MS.gene066404:intron | 5.0% |
| AACCCTTGAACCGTACCATG+GGG | + | chr1.3:36355136-36355155 | None:intergenic | 50.0% | |
| AAGCCAGAGCAAGCTCTGTA+TGG | - | chr1.3:36354764-36354783 | MS.gene066404:CDS | 50.0% | |
| AATCGGTGCGAGTCGAGTTT+AGG | + | chr1.3:36356843-36356862 | None:intergenic | 50.0% | |
| ACCATTAGGTCAACCCCGAA+TGG | - | chr1.3:36354865-36354884 | MS.gene066404:intron | 50.0% | |
| ATCGAACCTGAGACCTTTGG+AGG | - | chr1.3:36354818-36354837 | MS.gene066404:intron | 50.0% | |
| CATAGGATCAGCACCTACCA+AGG | + | chr1.3:36356131-36356150 | None:intergenic | 50.0% | |
| CCACAAAGATGACCCTCCAT+AGG | + | chr1.3:36356148-36356167 | None:intergenic | 50.0% | |
| CCACCGAAATTGACACCAGA+GGG | - | chr1.3:36354794-36354813 | MS.gene066404:CDS | 50.0% | |
| CCATTAGGTCAACCCCGAAT+GGG | - | chr1.3:36354866-36354885 | MS.gene066404:intron | 50.0% | |
| CCTATGGAGGGTCATCTTTG+TGG | - | chr1.3:36356145-36356164 | MS.gene066404:intron | 50.0% | |
| CCTGAACTACATCTCCTGCA+AGG | + | chr1.3:36356483-36356502 | None:intergenic | 50.0% | |
| CCTGACAGAGTTTGACAAGG+GGG | + | chr1.3:36355371-36355390 | None:intergenic | 50.0% | |
| CCTTGCAGGAGATGTAGTTC+AGG | - | chr1.3:36356480-36356499 | MS.gene066404:intron | 50.0% | |
| CGCCAACTAGTCCTTTACGA+AGG | - | chr1.3:36357195-36357214 | MS.gene066404:intron | 50.0% | |
| CGCCCCCAAAAACAAACATC+AGG | + | chr1.3:36355091-36355110 | None:intergenic | 50.0% | |
| CTAATCGCACCGTCCAATAG+CGG | + | chr1.3:36354339-36354358 | None:intergenic | 50.0% | |
| CTGAGCTGTCAACAATGTCC+AGG | + | chr1.3:36356429-36356448 | None:intergenic | 50.0% | |
| GACGAGATGAGAGGAAAGAC+CGG | - | chr1.3:36357355-36357374 | MS.gene066404:intron | 50.0% | |
| GGAATCGAACCTGAGACCTT+TGG | - | chr1.3:36354815-36354834 | MS.gene066404:intron | 50.0% | |
| GGGTCATCTTTGTGGTTCCA+TGG | - | chr1.3:36356153-36356172 | MS.gene066404:intron | 50.0% | |
| TCTGAAAACCAGGACCTTGC+AGG | - | chr1.3:36356466-36356485 | MS.gene066404:intron | 50.0% | |
| TGGCCGAACACAGAGATTGT+TGG | + | chr1.3:36354278-36354297 | None:intergenic | 50.0% | |
| TTCGGGGTTGACCTAATGGT+TGG | + | chr1.3:36354865-36354884 | None:intergenic | 50.0% | |
| TTGCAAAGCCCTGTATGGAC+TGG | + | chr1.3:36354298-36354317 | None:intergenic | 50.0% | |
| TTTGCTCCTCCAAAGGTCTC+AGG | + | chr1.3:36354827-36354846 | None:intergenic | 50.0% | |
| ! | AAAGGTTCTGACAAGTGGGC+AGG | - | chr1.3:36355035-36355054 | MS.gene066404:intron | 50.0% |
| ! | AAGGTTCTGACAAGTGGGCA+GGG | - | chr1.3:36355036-36355055 | MS.gene066404:intron | 50.0% |
| ! | AGTCCATACAGAGCTTGCTC+TGG | + | chr1.3:36354770-36354789 | None:intergenic | 50.0% |
| ! | CCTCTGGTGTCAATTTCGGT+GGG | + | chr1.3:36354796-36354815 | None:intergenic | 50.0% |
| ! | CTTGGAGTTTGCTCCTCCAA+AGG | + | chr1.3:36354834-36354853 | None:intergenic | 50.0% |
| ! | GGTTGACCTAATGGTTGGCT+TGG | + | chr1.3:36354860-36354879 | None:intergenic | 50.0% |
| !! | CTTGGTAGGTGCTGATCCTA+TGG | - | chr1.3:36356129-36356148 | MS.gene066404:intron | 50.0% |
| !! | GCTTGCTCTGGCTTTAAACG+GGG | + | chr1.3:36354758-36354777 | None:intergenic | 50.0% |
| !! | GTAGGTGCTGATCCTATGGA+GGG | - | chr1.3:36356133-36356152 | MS.gene066404:intron | 50.0% |
| !! | TAAAGGACTAGTTGGCGGCT+TGG | + | chr1.3:36357192-36357211 | None:intergenic | 50.0% |
| !!! | GTTTGTTTTTGGGGGCGAGT+GGG | - | chr1.3:36355094-36355113 | MS.gene066404:intron | 50.0% |
| !!! | TGTTTGTTTTTGGGGGCGAG+TGG | - | chr1.3:36355093-36355112 | MS.gene066404:intron | 50.0% |
| !!! | TTTGTTTTTGGGGGCGAGTG+GGG | - | chr1.3:36355095-36355114 | MS.gene066404:intron | 50.0% |
| ACCCTTGAACCGTACCATGG+GGG | + | chr1.3:36355135-36355154 | None:intergenic | 55.0% | |
| CCCACCGAAATTGACACCAG+AGG | - | chr1.3:36354793-36354812 | MS.gene066404:CDS | 55.0% | |
| CCCATTCGGGGTTGACCTAA+TGG | + | chr1.3:36354869-36354888 | None:intergenic | 55.0% | |
| CCCCCTTGTCAAACTCTGTC+AGG | - | chr1.3:36355368-36355387 | MS.gene066404:intron | 55.0% | |
| CTACATCTCCTGCAAGGTCC+TGG | + | chr1.3:36356477-36356496 | None:intergenic | 55.0% | |
| GAGAGACTGACCTCATCACC+AGG | + | chr1.3:36354194-36354213 | None:intergenic | 55.0% | |
| GGTTGTGAAAGGGCCTTGGT+AGG | - | chr1.3:36356115-36356134 | MS.gene066404:intron | 55.0% | |
| GTCTCAGGTTCGATTCCCTC+TGG | + | chr1.3:36354812-36354831 | None:intergenic | 55.0% | |
| GTGTTCGGCCAGTCCATACA+GGG | - | chr1.3:36354287-36354306 | MS.gene066404:CDS | 55.0% | |
| TGAGCAGAGTGAGTTGCGCT+TGG | - | chr1.3:36355064-36355083 | MS.gene066404:intron | 55.0% | |
| TGTGTTCGGCCAGTCCATAC+AGG | - | chr1.3:36354286-36354305 | MS.gene066404:CDS | 55.0% | |
| ! | CCCTCTGGTGTCAATTTCGG+TGG | + | chr1.3:36354797-36354816 | None:intergenic | 55.0% |
| ! | GGTTGGTTGTGAAAGGGCCT+TGG | - | chr1.3:36356111-36356130 | MS.gene066404:intron | 55.0% |
| !! | ACTCGACTCGCACCGATTCA+AGG | - | chr1.3:36356845-36356864 | MS.gene066404:intron | 55.0% |
| !! | GGTAGGTGCTGATCCTATGG+AGG | - | chr1.3:36356132-36356151 | MS.gene066404:intron | 55.0% |
| AATCCCACCACCCACTTGCG+GGG | - | chr1.3:36354731-36354750 | MS.gene066404:CDS | 60.0% | |
| AGCCCCCATGGTACGGTTCA+AGG | - | chr1.3:36355130-36355149 | MS.gene066404:intron | 60.0% | |
| ATCGCACCGTCCAATAGCGG+CGG | + | chr1.3:36354336-36354355 | None:intergenic | 60.0% | |
| CAATCCCACCACCCACTTGC+GGG | - | chr1.3:36354730-36354749 | MS.gene066404:CDS | 60.0% | |
| CCAATCCCACCACCCACTTG+CGG | - | chr1.3:36354729-36354748 | MS.gene066404:CDS | 60.0% | |
| CTTCAGAGGGTTCGGGCACA+TGG | + | chr1.3:36357425-36357444 | None:intergenic | 60.0% | |
| GCCCCCATGGTACGGTTCAA+GGG | - | chr1.3:36355131-36355150 | MS.gene066404:intron | 60.0% | |
| GGGACAAAGCCCCCATGGTA+CGG | - | chr1.3:36355123-36355142 | MS.gene066404:intron | 60.0% | |
| ! | TGTGCCCGAACCCTCTGAAG+AGG | - | chr1.3:36357425-36357444 | MS.gene066404:intron | 60.0% |
| ATCCCACCACCCACTTGCGG+GGG | - | chr1.3:36354732-36354751 | MS.gene066404:CDS | 65.0% | |
| TAAACGGGGCCCCCGCAAGT+GGG | + | chr1.3:36354744-36354763 | None:intergenic | 65.0% | |
| TGTGGGGGACAAAGCCCCCA+TGG | - | chr1.3:36355118-36355137 | MS.gene066404:intron | 65.0% | |
| TTAAACGGGGCCCCCGCAAG+TGG | + | chr1.3:36354745-36354764 | None:intergenic | 65.0% | |
| TTTGGGGGCGAGTGGGGTGT+GGG | - | chr1.3:36355101-36355120 | MS.gene066404:intron | 65.0% | |
| !! | CCGCAAGTGGGTGGTGGGAT+TGG | + | chr1.3:36354732-36354751 | None:intergenic | 65.0% |
| !! | TTTTGGGGGCGAGTGGGGTG+TGG | - | chr1.3:36355100-36355119 | MS.gene066404:intron | 65.0% |
| ACCGTCCAATAGCGGCGGCG+GGG | + | chr1.3:36354331-36354350 | None:intergenic | 70.0% | |
| CACCGTCCAATAGCGGCGGC+GGG | + | chr1.3:36354332-36354351 | None:intergenic | 70.0% | |
| GCACCGTCCAATAGCGGCGG+CGG | + | chr1.3:36354333-36354352 | None:intergenic | 70.0% | |
| TTGGGGGCGAGTGGGGTGTG+GGG | - | chr1.3:36355102-36355121 | MS.gene066404:intron | 70.0% | |
| CCCCCGCCGCCGCTATTGGA+CGG | - | chr1.3:36354327-36354346 | MS.gene066404:intron | 75.0% | |
| CCGTCCAATAGCGGCGGCGG+GGG | + | chr1.3:36354330-36354349 | None:intergenic | 75.0% | |
| GGCCCCCGCAAGTGGGTGGT+GGG | + | chr1.3:36354737-36354756 | None:intergenic | 75.0% | |
| GTTGCCCCCGCCGCCGCTAT+TGG | - | chr1.3:36354323-36354342 | MS.gene066404:intron | 75.0% | |
| TGGGGGCGAGTGGGGTGTGG+GGG | - | chr1.3:36355103-36355122 | MS.gene066404:intron | 75.0% | |
| ! | ACGGGGCCCCCGCAAGTGGG+TGG | + | chr1.3:36354741-36354760 | None:intergenic | 80.0% |
| ! | GGGCCCCCGCAAGTGGGTGG+TGG | + | chr1.3:36354738-36354757 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 36353940 | 36357512 | 36353940 | ID=MS.gene066404 |
| chr1.3 | mRNA | 36353940 | 36357512 | 36353940 | ID=MS.gene066404.t1;Parent=MS.gene066404 |
| chr1.3 | exon | 36357438 | 36357512 | 36357438 | ID=MS.gene066404.t1.exon1;Parent=MS.gene066404.t1 |
| chr1.3 | CDS | 36357438 | 36357512 | 36357438 | ID=cds.MS.gene066404.t1;Parent=MS.gene066404.t1 |
| chr1.3 | exon | 36357250 | 36357348 | 36357250 | ID=MS.gene066404.t1.exon2;Parent=MS.gene066404.t1 |
| chr1.3 | CDS | 36357250 | 36357348 | 36357250 | ID=cds.MS.gene066404.t1;Parent=MS.gene066404.t1 |
| chr1.3 | exon | 36355877 | 36355978 | 36355877 | ID=MS.gene066404.t1.exon3;Parent=MS.gene066404.t1 |
| chr1.3 | CDS | 36355877 | 36355978 | 36355877 | ID=cds.MS.gene066404.t1;Parent=MS.gene066404.t1 |
| chr1.3 | exon | 36354915 | 36354974 | 36354915 | ID=MS.gene066404.t1.exon4;Parent=MS.gene066404.t1 |
| chr1.3 | CDS | 36354915 | 36354974 | 36354915 | ID=cds.MS.gene066404.t1;Parent=MS.gene066404.t1 |
| chr1.3 | exon | 36354717 | 36354823 | 36354717 | ID=MS.gene066404.t1.exon5;Parent=MS.gene066404.t1 |
| chr1.3 | CDS | 36354717 | 36354823 | 36354717 | ID=cds.MS.gene066404.t1;Parent=MS.gene066404.t1 |
| chr1.3 | exon | 36354558 | 36354640 | 36354558 | ID=MS.gene066404.t1.exon6;Parent=MS.gene066404.t1 |
| chr1.3 | CDS | 36354558 | 36354640 | 36354558 | ID=cds.MS.gene066404.t1;Parent=MS.gene066404.t1 |
| chr1.3 | exon | 36354227 | 36354317 | 36354227 | ID=MS.gene066404.t1.exon7;Parent=MS.gene066404.t1 |
| chr1.3 | CDS | 36354227 | 36354317 | 36354227 | ID=cds.MS.gene066404.t1;Parent=MS.gene066404.t1 |
| chr1.3 | exon | 36353940 | 36354144 | 36353940 | ID=MS.gene066404.t1.exon8;Parent=MS.gene066404.t1 |
| chr1.3 | CDS | 36353940 | 36354144 | 36353940 | ID=cds.MS.gene066404.t1;Parent=MS.gene066404.t1 |
| Gene Sequence |
| Protein sequence |
