AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51817

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51817.t1 MTR_3g023830 98.851 261 3 0 1 261 1 261 0.0 513
MS.gene51817.t1 MTR_3g465570 36.032 247 152 4 15 257 148 392 3.82e-47 161
MS.gene51817.t1 MTR_5g024780 41.317 167 97 1 35 201 269 434 4.73e-31 121
MS.gene51817.t1 MTR_5g024780 40.000 160 95 1 59 218 269 427 6.83e-23 97.8
MS.gene51817.t1 MTR_5g024780 31.472 197 109 2 27 198 330 525 1.92e-17 82.0
MS.gene51817.t1 MTR_8g072950 40.268 149 89 0 53 201 275 423 4.74e-26 107
MS.gene51817.t1 MTR_8g072950 38.690 168 102 1 34 201 280 446 1.05e-22 97.4
MS.gene51817.t1 MTR_8g072950 37.324 142 88 1 77 218 276 416 5.56e-20 89.4
MS.gene51817.t1 MTR_8g072950 33.161 193 121 5 32 220 324 512 9.17e-19 85.9
MS.gene51817.t1 MTR_4g098530 33.333 177 117 1 25 201 201 376 5.12e-23 97.8
MS.gene51817.t1 MTR_4g098530 36.420 162 102 1 59 220 188 348 4.14e-22 95.1
MS.gene51817.t1 MTR_4g098530 35.897 156 100 0 46 201 198 353 1.05e-20 91.3
MS.gene51817.t1 MTR_4g098530 31.683 202 112 2 27 203 249 449 2.11e-17 81.6
MS.gene51817.t1 MTR_4g098530 30.357 224 144 5 22 234 213 435 7.51e-17 80.1
MS.gene51817.t1 MTR_2g079560 29.665 209 128 2 37 226 2 210 1.38e-21 94.0
MS.gene51817.t1 MTR_2g079560 28.431 204 121 2 24 203 73 275 2.00e-13 70.1
MS.gene51817.t1 MTR_2g079560 31.100 209 138 5 13 218 354 559 6.91e-11 62.4
MS.gene51817.t1 MTR_2g079560 29.665 209 128 2 37 226 2 210 1.71e-21 93.6
MS.gene51817.t1 MTR_2g079560 28.431 204 121 2 24 203 73 275 2.37e-13 69.7
MS.gene51817.t1 MTR_2g079560 31.100 209 138 5 13 218 352 557 7.78e-11 62.4
MS.gene51817.t1 MTR_4g105010 36.585 164 97 3 70 227 206 368 3.11e-21 92.8
MS.gene51817.t1 MTR_4g105010 28.346 254 129 5 3 204 183 435 2.67e-17 81.3
MS.gene51817.t1 MTR_4g105010 33.333 171 108 3 49 216 208 375 2.54e-16 78.6
MS.gene51817.t1 MTR_2g079560 29.442 197 120 2 49 226 61 257 2.73e-19 87.4
MS.gene51817.t1 MTR_2g079560 28.431 204 121 2 24 203 120 322 2.35e-13 69.7
MS.gene51817.t1 MTR_2g079560 29.707 239 102 7 13 218 399 604 7.65e-11 62.4
MS.gene51817.t1 MTR_5g032910 30.085 236 133 5 31 236 161 394 4.84e-18 83.6
MS.gene51817.t1 MTR_6g036890 32.597 181 115 7 46 219 76 256 2.21e-17 82.0
MS.gene51817.t1 MTR_3g076990 31.928 166 106 3 68 227 201 365 3.11e-16 78.2
MS.gene51817.t1 MTR_3g076990 32.903 155 100 2 44 197 200 351 5.73e-16 77.4
MS.gene51817.t1 MTR_3g076990 34.641 153 96 3 31 180 280 431 4.66e-15 74.7
MS.gene51817.t1 MTR_3g076990 28.632 234 154 6 27 249 253 484 1.04e-14 73.9
MS.gene51817.t1 MTR_5g085700 33.708 178 112 6 45 216 230 407 1.05e-15 77.0
MS.gene51817.t1 MTR_5g085700 31.383 188 99 6 36 194 127 313 7.43e-12 65.5
MS.gene51817.t1 MTR_1g038890 29.572 257 138 11 34 253 237 487 1.32e-15 76.6
MS.gene51817.t1 MTR_7g067530 33.166 199 126 7 25 216 385 583 2.16e-15 76.3
MS.gene51817.t1 MTR_7g081780 32.487 197 124 7 59 247 279 474 8.49e-15 74.3
MS.gene51817.t1 MTR_7g081780 33.129 163 100 8 46 201 481 641 3.35e-11 63.5
MS.gene51817.t1 MTR_1g039220 29.130 230 154 8 32 253 259 487 1.42e-14 73.6
MS.gene51817.t1 MTR_1g039220 33.166 199 101 8 36 203 119 316 6.95e-13 68.6
MS.gene51817.t1 MTR_1g039220 31.771 192 124 7 34 219 213 403 7.02e-12 65.9
MS.gene51817.t1 MTR_1g039220 31.395 172 110 8 34 198 237 407 3.68e-11 63.5
MS.gene51817.t1 MTR_7g051040 31.163 215 114 9 36 219 124 335 1.44e-14 73.6
MS.gene51817.t1 MTR_2g070020 34.518 197 96 8 34 198 474 669 1.57e-14 73.6
MS.gene51817.t1 MTR_2g038380 30.522 249 139 7 1 218 20 265 1.58e-14 72.8
MS.gene51817.t1 MTR_2g038380 31.461 178 118 3 24 198 93 269 4.05e-13 68.6
MS.gene51817.t1 MTR_2g038380 31.677 161 104 4 44 198 135 295 1.12e-11 64.3
MS.gene51817.t1 MTR_4g127120 36.257 171 106 3 24 192 30 199 2.15e-14 72.4
MS.gene51817.t1 MTR_4g127120 34.667 150 94 3 32 178 108 256 5.83e-14 70.9
MS.gene51817.t1 MTR_4g127120 31.313 198 110 3 27 198 56 253 6.18e-14 70.9
MS.gene51817.t1 MTR_4g127120 31.098 164 111 2 40 201 22 185 5.14e-13 68.2
MS.gene51817.t1 MTR_5g096530 32.536 209 125 10 36 230 144 350 2.53e-14 72.8
MS.gene51817.t1 MTR_5g096530 34.756 164 100 7 59 216 264 426 2.28e-12 67.0
MS.gene51817.t1 MTR_5g096530 31.138 167 110 5 58 219 215 381 1.87e-11 64.3
MS.gene51817.t1 MTR_3g092390 33.696 184 112 8 59 236 173 352 6.61e-14 71.6
MS.gene51817.t1 MTR_8g062130 33.333 195 103 5 30 198 729 922 7.35e-14 71.6
MS.gene51817.t1 MTR_8g062130 31.677 161 107 3 29 187 845 1004 3.34e-11 63.5
MS.gene51817.t1 MTR_1g039310 30.841 214 139 7 25 232 346 556 9.71e-14 71.2
MS.gene51817.t1 MTR_7g091680 29.798 198 130 7 44 232 134 331 1.02e-13 71.2
MS.gene51817.t1 MTR_5g087350 33.862 189 116 9 38 219 90 276 1.14e-13 70.9
MS.gene51817.t1 MTR_7g045710 33.508 191 96 8 59 219 295 484 1.44e-13 70.9
MS.gene51817.t1 MTR_5g025950 33.333 180 113 7 44 216 428 607 1.55e-13 70.5
MS.gene51817.t1 MTR_8g062140 29.952 207 115 6 56 233 666 871 2.00e-13 70.5
MS.gene51817.t1 MTR_8g062140 30.165 242 108 7 30 211 688 928 1.13e-12 68.2
MS.gene51817.t1 MTR_8g062140 31.915 188 99 5 32 192 784 969 2.30e-11 64.3
MS.gene51817.t1 MTR_7g045860 33.508 191 96 8 59 219 286 475 2.17e-13 70.1
MS.gene51817.t1 MTR_7g059285 37.222 180 105 8 49 221 342 520 2.79e-13 69.7
MS.gene51817.t1 MTR_7g059285 33.702 181 111 8 34 206 111 290 1.23e-12 67.8
MS.gene51817.t1 MTR_5g045910 32.990 194 120 9 34 219 140 331 2.86e-13 69.7
MS.gene51817.t1 MTR_7g045510 35.938 192 111 11 38 219 248 437 2.92e-13 69.7
MS.gene51817.t1 MTR_7g045510 31.278 227 145 9 36 253 321 545 1.54e-12 67.8
MS.gene51817.t1 MTR_7g045510 31.776 214 136 10 14 219 370 581 7.90e-12 65.5
MS.gene51817.t1 MTR_2g016530 33.333 189 114 8 35 216 323 506 3.07e-13 69.7
MS.gene51817.t1 MTR_8g089200 29.302 215 120 7 36 219 379 592 3.33e-13 69.7
MS.gene51817.t1 MTR_7g081410 29.082 196 132 6 59 247 157 352 4.25e-13 69.3
MS.gene51817.t1 MTR_7g081480 33.735 166 101 7 34 191 106 270 4.65e-13 69.3
MS.gene51817.t1 MTR_7g081480 27.854 219 142 7 59 261 277 495 7.48e-11 62.4
MS.gene51817.t1 MTR_7g081410 29.082 196 132 6 59 247 277 472 4.65e-13 69.3
MS.gene51817.t1 MTR_1g047670 35.928 167 100 7 34 194 143 308 5.54e-13 68.9
MS.gene51817.t1 MTR_1g047670 31.795 195 123 7 24 212 181 371 3.55e-12 66.6
MS.gene51817.t1 MTR_1g047670 37.671 146 87 4 77 218 91 236 1.19e-11 65.1
MS.gene51817.t1 MTR_2g079560 29.412 170 118 2 35 203 82 250 5.64e-13 68.6
MS.gene51817.t1 MTR_2g079560 31.148 122 79 1 110 226 64 185 3.82e-11 63.2
MS.gene51817.t1 MTR_2g079560 31.100 209 138 5 13 218 329 534 7.44e-11 62.4
MS.gene51817.t1 MTR_7g010000 35.625 160 96 7 49 201 164 323 5.72e-13 68.9
MS.gene51817.t1 MTR_4g105520 32.161 199 126 7 34 223 375 573 6.21e-13 68.9
MS.gene51817.t1 MTR_8g041100 37.692 130 76 5 45 169 230 359 6.24e-13 68.6
MS.gene51817.t1 MTR_8g076410 40.299 134 75 5 59 187 128 261 6.59e-13 68.2
MS.gene51817.t1 MTR_7g081570 33.333 171 103 8 59 221 273 440 6.73e-13 68.6
MS.gene51817.t1 MTR_7g081570 33.133 166 102 7 34 191 102 266 4.25e-11 63.2
MS.gene51817.t1 MTR_7g446190 29.091 220 125 6 59 247 228 447 8.05e-13 68.6
MS.gene51817.t1 MTR_5g087360 31.548 168 108 7 58 219 109 275 1.01e-12 68.2
MS.gene51817.t1 MTR_3g069210 27.700 213 144 4 20 223 553 764 1.10e-12 68.2
MS.gene51817.t1 MTR_5g087360 31.548 168 108 7 58 219 109 275 1.15e-12 68.2
MS.gene51817.t1 MTR_8g041150 36.923 130 77 5 45 169 177 306 1.23e-12 67.8
MS.gene51817.t1 MTR_2g019170 27.039 233 138 8 1 201 117 349 1.39e-12 67.4
MS.gene51817.t1 MTR_2g029010 33.146 178 105 9 36 203 120 293 1.47e-12 67.8
MS.gene51817.t1 MTR_3g092420 33.152 184 113 8 59 236 131 310 1.48e-12 67.8
MS.gene51817.t1 MTR_1g102500 30.319 188 99 8 45 201 254 440 1.58e-12 67.4
MS.gene51817.t1 MTR_1g102500 28.696 230 130 10 22 219 326 553 2.81e-12 67.0
MS.gene51817.t1 MTR_8g461110 30.000 190 126 7 36 219 113 301 1.93e-12 67.4
MS.gene51817.t1 MTR_5g069580 31.818 198 118 9 46 227 111 307 2.06e-12 67.0
MS.gene51817.t1 MTR_8g066700 32.597 181 115 7 46 219 104 284 2.09e-12 67.4
MS.gene51817.t1 MTR_8g076378 39.552 134 76 5 59 187 128 261 2.20e-12 66.6
MS.gene51817.t1 MTR_1g040615 27.500 240 142 7 46 253 1305 1544 2.43e-12 67.0
MS.gene51817.t1 MTR_8g461110 30.000 190 126 7 36 219 113 301 2.65e-12 67.0
MS.gene51817.t1 MTR_5g019070 34.066 182 112 8 46 219 98 279 2.67e-12 67.0
MS.gene51817.t1 MTR_5g019070 28.302 212 121 6 36 216 360 571 4.63e-11 63.2
MS.gene51817.t1 MTR_7g081720 31.795 195 123 8 34 219 118 311 2.80e-12 67.0
MS.gene51817.t1 MTR_4g130390 31.579 190 122 7 34 216 321 509 3.28e-12 66.6
MS.gene51817.t1 MTR_1g088930 30.435 207 127 10 46 235 103 309 3.53e-12 66.6
MS.gene51817.t1 MTR_1g039090 28.509 228 154 8 34 253 136 362 3.65e-12 66.2
MS.gene51817.t1 MTR_5g026160 27.434 226 153 8 24 238 334 559 3.79e-12 66.6
MS.gene51817.t1 MTR_4g094790 33.117 154 97 6 45 192 419 572 3.91e-12 66.6
MS.gene51817.t1 MTR_7g039330 28.311 219 151 6 15 227 467 685 3.95e-12 66.6
MS.gene51817.t1 MTR_1g029940 34.392 189 115 9 36 216 290 477 4.29e-12 66.2
MS.gene51817.t1 MTR_1g080440 31.928 166 108 5 59 219 260 425 4.88e-12 66.2
MS.gene51817.t1 MTR_8g445800 30.526 190 125 7 36 219 113 301 5.80e-12 65.9
MS.gene51817.t1 MTR_1g039240 28.241 216 124 7 34 219 335 549 6.13e-12 65.9
MS.gene51817.t1 MTR_5g087370 34.731 167 102 7 59 219 110 275 6.25e-12 65.9
MS.gene51817.t1 MTR_3g032340 32.927 164 101 6 79 237 593 752 7.04e-12 65.9
MS.gene51817.t1 MTR_3g113140 35.829 187 110 9 38 216 486 670 7.37e-12 65.5
MS.gene51817.t1 MTR_3g113140 32.787 183 96 6 35 213 339 498 1.48e-11 64.7
MS.gene51817.t1 MTR_6g036790 29.101 189 125 8 36 216 347 534 8.25e-12 65.5
MS.gene51817.t1 MTR_6g036790 30.645 186 97 6 46 221 110 273 4.21e-11 63.2
MS.gene51817.t1 MTR_6g088785 33.533 167 103 7 35 194 113 278 9.42e-12 65.1
MS.gene51817.t1 MTR_1g069470 30.769 208 132 10 36 233 229 434 1.10e-11 65.1
MS.gene51817.t1 MTR_5g087340 32.143 168 107 7 58 219 110 276 1.13e-11 65.1
MS.gene51817.t1 MTR_6g088785 33.533 167 103 7 35 194 113 278 1.16e-11 65.1
MS.gene51817.t1 MTR_1g040545 26.906 223 151 8 39 253 144 362 1.30e-11 64.7
MS.gene51817.t1 MTR_5g082270 32.450 151 95 6 58 201 117 267 1.31e-11 64.7
MS.gene51817.t1 MTR_1g029930 28.169 213 130 9 36 227 116 326 1.36e-11 64.7
MS.gene51817.t1 MTR_5g014700 32.039 206 131 8 19 216 186 390 1.63e-11 64.7
MS.gene51817.t1 MTR_8g028800 43.119 109 60 2 79 185 715 823 2.13e-11 64.3
MS.gene51817.t1 MTR_2g072620 30.964 197 113 7 40 216 100 293 2.19e-11 63.9
MS.gene51817.t1 MTR_6g088790 31.214 173 109 8 35 198 115 286 2.38e-11 63.9
MS.gene51817.t1 MTR_3g060880 29.167 216 145 8 11 219 316 530 2.88e-11 63.9
MS.gene51817.t1 MTR_3g070220 27.397 219 122 7 34 216 259 476 3.06e-11 63.5
MS.gene51817.t1 MTR_7g022160 33.871 186 109 10 34 211 388 567 3.20e-11 63.5
MS.gene51817.t1 MTR_2g449790 28.947 190 128 7 36 219 108 296 3.24e-11 63.5
MS.gene51817.t1 MTR_5g047390 32.240 183 109 6 44 211 113 295 3.52e-11 63.5
MS.gene51817.t1 MTR_6g036840 29.630 189 124 8 36 216 372 559 3.61e-11 63.5
MS.gene51817.t1 MTR_5g014720 33.803 142 87 4 58 192 180 321 3.73e-11 63.5
MS.gene51817.t1 MTR_8g041190 36.923 130 77 5 45 169 180 309 3.89e-11 63.5
MS.gene51817.t1 MTR_8g040925 36.923 130 77 5 45 169 180 309 3.89e-11 63.5
MS.gene51817.t1 MTR_1g015530 33.714 175 107 9 49 216 217 389 4.00e-11 63.5
MS.gene51817.t1 MTR_1g015530 32.990 194 120 10 13 198 85 276 5.74e-11 62.8
MS.gene51817.t1 MTR_4g028090 29.858 211 137 10 16 218 261 468 4.04e-11 63.2
MS.gene51817.t1 MTR_4g036695 28.696 230 149 12 34 250 141 368 4.07e-11 63.2
MS.gene51817.t1 MTR_5g095420 30.516 213 132 10 36 241 447 650 4.89e-11 63.2
MS.gene51817.t1 MTR_1g015530 33.714 175 107 9 49 216 188 360 4.92e-11 63.2
MS.gene51817.t1 MTR_1g015530 32.990 194 120 10 13 198 56 247 6.99e-11 62.8
MS.gene51817.t1 MTR_2g072610 29.327 208 109 9 59 229 265 471 5.25e-11 62.8
MS.gene51817.t1 MTR_4g037720 31.034 174 105 8 64 231 182 346 5.90e-11 62.8
MS.gene51817.t1 MTR_6g036870 28.358 201 135 8 24 216 323 522 6.33e-11 62.8
MS.gene51817.t1 MTR_3g093930 31.319 182 116 8 44 218 402 581 6.48e-11 62.8
MS.gene51817.t1 MTR_3g110840 31.720 186 116 8 44 219 141 325 6.51e-11 62.8
MS.gene51817.t1 MTR_2g450870 31.937 191 123 7 34 218 337 526 6.87e-11 62.8
MS.gene51817.t1 MTR_5g082920 30.189 212 132 10 34 231 285 494 6.88e-11 62.8
MS.gene51817.t1 MTR_1g088935 34.146 164 93 10 59 209 133 294 8.48e-11 62.4
MS.gene51817.t1 MTR_5g026000 27.778 216 144 9 36 240 360 574 8.59e-11 62.4
MS.gene51817.t1 MTR_8g445800 32.877 146 94 4 78 219 11 156 8.69e-11 62.4
MS.gene51817.t1 MTR_1g100787 31.633 196 124 9 36 223 254 447 9.26e-11 62.4
MS.gene51817.t1 MTR_7g074010 37.255 153 86 7 73 215 63 215 9.75e-11 62.0
MS.gene51817.t1 MTR_7g074010 37.255 153 86 7 73 215 108 260 9.95e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51817.t1 AT5G07910 75.862 261 62 1 1 260 1 261 1.22e-129 368
MS.gene51817.t1 AT2G30105 37.751 249 151 2 15 260 124 371 7.86e-53 176
MS.gene51817.t1 AT2G17440 40.351 171 101 1 31 201 218 387 2.79e-27 110
MS.gene51817.t1 AT2G17440 32.203 177 117 2 27 201 306 481 1.09e-16 79.7
MS.gene51817.t1 AT2G17440 32.667 150 77 3 90 216 207 355 1.60e-11 64.3
MS.gene51817.t1 AT4G35470 38.926 149 91 0 53 201 255 403 5.83e-24 100
MS.gene51817.t1 AT4G35470 28.571 217 129 3 45 235 270 486 8.86e-17 80.1
MS.gene51817.t1 AT4G35470 29.000 200 116 2 27 201 299 497 6.35e-14 71.6
MS.gene51817.t1 AT4G35470 38.926 149 91 0 53 201 255 403 5.91e-24 100
MS.gene51817.t1 AT4G35470 28.571 217 129 3 45 235 270 486 7.27e-17 80.1
MS.gene51817.t1 AT4G35470 29.000 200 116 2 27 201 299 497 7.32e-14 71.2
MS.gene51817.t1 AT3G15410 30.851 188 117 1 37 211 2 189 1.61e-20 90.9
MS.gene51817.t1 AT3G15410 29.412 204 119 2 24 203 72 274 2.21e-18 84.7
MS.gene51817.t1 AT3G26500 30.952 210 133 4 29 227 117 325 2.12e-19 87.4
MS.gene51817.t1 AT3G26500 31.401 207 135 5 19 220 180 384 4.73e-19 86.3
MS.gene51817.t1 AT3G15410 29.897 194 117 2 37 211 2 195 1.54e-18 85.1
MS.gene51817.t1 AT3G15410 29.412 204 119 2 24 203 78 280 1.82e-18 85.1
MS.gene51817.t1 AT1G12970 36.364 165 98 3 69 227 163 326 1.78e-18 84.7
MS.gene51817.t1 AT1G12970 32.258 155 104 1 46 199 163 317 3.72e-15 75.1
MS.gene51817.t1 AT1G12970 31.579 209 114 5 22 202 184 391 1.04e-14 73.6
MS.gene51817.t1 AT1G12970 32.099 162 106 3 24 182 234 394 4.04e-13 68.9
MS.gene51817.t1 AT3G11330 35.570 149 94 2 69 216 200 347 3.77e-17 80.9
MS.gene51817.t1 AT3G11330 29.952 207 118 4 24 204 225 430 2.04e-14 72.8
MS.gene51817.t1 AT3G11330 31.169 154 105 1 46 198 200 353 3.88e-13 69.3
MS.gene51817.t1 AT3G11330 27.528 178 102 3 4 155 251 427 1.71e-11 64.3
MS.gene51817.t1 AT4G26050 31.120 241 138 6 45 259 81 319 4.72e-17 80.1
MS.gene51817.t1 AT4G26050 31.902 163 109 2 41 201 54 216 1.22e-13 70.5
MS.gene51817.t1 AT5G05850 35.294 153 87 3 75 216 202 353 3.03e-16 78.2
MS.gene51817.t1 AT5G05850 29.825 228 110 4 25 203 209 435 5.97e-15 74.7
MS.gene51817.t1 AT5G05850 34.677 124 81 0 95 218 209 332 8.39e-13 68.2
MS.gene51817.t1 AT5G17680 33.333 198 102 7 30 201 706 899 5.70e-16 77.8
MS.gene51817.t1 AT5G17680 28.774 212 129 7 21 211 807 1017 2.19e-12 67.4
MS.gene51817.t1 AT5G17680 33.333 198 102 7 30 201 707 900 6.04e-16 77.8
MS.gene51817.t1 AT5G17680 28.774 212 129 7 21 211 808 1018 2.36e-12 67.0
MS.gene51817.t1 AT3G47570 33.333 192 122 6 36 221 353 544 4.16e-15 75.5
MS.gene51817.t1 AT1G71400 36.111 180 101 9 64 229 104 283 4.46e-14 72.0
MS.gene51817.t1 AT5G46330 32.683 205 106 8 46 219 98 301 6.04e-14 72.0
MS.gene51817.t1 AT5G46330 35.429 175 105 8 49 216 221 394 6.04e-14 72.0
MS.gene51817.t1 AT5G46330 32.683 205 106 8 46 219 98 301 6.04e-14 72.0
MS.gene51817.t1 AT5G46330 35.429 175 105 8 49 216 221 394 6.04e-14 72.0
MS.gene51817.t1 AT3G56370 33.854 192 102 9 36 203 304 494 6.32e-14 71.6
MS.gene51817.t1 AT4G04220 35.556 180 108 7 45 216 131 310 6.97e-14 71.6
MS.gene51817.t1 AT5G51350 32.039 206 129 8 35 230 117 321 7.70e-14 71.6
MS.gene51817.t1 AT4G20140 31.461 178 116 6 45 216 120 297 1.08e-13 71.2
MS.gene51817.t1 AT5G63930 34.043 188 115 9 36 216 114 299 1.27e-13 70.9
MS.gene51817.t1 AT5G63930 35.882 170 104 5 52 216 442 611 5.91e-13 68.9
MS.gene51817.t1 AT5G63930 31.707 164 105 7 28 185 466 628 8.65e-11 62.4
MS.gene51817.t1 AT5G63930 34.043 188 115 9 36 216 50 235 1.37e-13 70.9
MS.gene51817.t1 AT5G63930 35.882 170 104 5 52 216 378 547 7.03e-13 68.6
MS.gene51817.t1 AT5G63930 31.707 164 105 7 28 185 402 564 9.82e-11 62.4
MS.gene51817.t1 AT1G27180 29.714 175 119 4 27 198 854 1027 1.50e-13 70.9
MS.gene51817.t1 AT1G27180 28.205 195 126 5 30 211 763 956 1.35e-11 64.7
MS.gene51817.t1 AT1G27180 29.714 175 119 4 27 198 1016 1189 1.80e-13 70.5
MS.gene51817.t1 AT1G27180 28.205 195 126 5 30 211 925 1118 1.61e-11 64.7
MS.gene51817.t1 AT4G29880 35.673 171 107 3 24 192 57 226 1.93e-13 69.7
MS.gene51817.t1 AT4G29880 40.367 109 63 2 95 201 81 189 4.78e-13 68.6
MS.gene51817.t1 AT1G27180 29.714 175 119 4 27 198 852 1025 1.93e-13 70.5
MS.gene51817.t1 AT1G27180 28.205 195 126 5 30 211 761 954 1.68e-11 64.7
MS.gene51817.t1 AT1G27180 29.714 175 119 4 27 198 852 1025 1.93e-13 70.5
MS.gene51817.t1 AT1G27180 28.205 195 126 5 30 211 761 954 1.68e-11 64.7
MS.gene51817.t1 AT1G27180 29.714 175 119 4 27 198 854 1027 1.93e-13 70.5
MS.gene51817.t1 AT1G27180 28.205 195 126 5 30 211 763 956 1.88e-11 64.3
MS.gene51817.t1 AT1G27180 29.714 175 119 4 27 198 678 851 2.00e-13 70.5
MS.gene51817.t1 AT1G27180 28.205 195 126 5 30 211 587 780 1.79e-11 64.7
MS.gene51817.t1 AT1G27180 29.714 175 119 4 27 198 678 851 2.00e-13 70.5
MS.gene51817.t1 AT1G27180 28.205 195 126 5 30 211 587 780 1.79e-11 64.7
MS.gene51817.t1 AT1G27180 29.714 175 119 4 27 198 678 851 2.00e-13 70.5
MS.gene51817.t1 AT1G27180 28.205 195 126 5 30 211 587 780 1.79e-11 64.7
MS.gene51817.t1 AT1G08590 32.524 206 107 8 45 219 222 426 2.77e-13 69.7
MS.gene51817.t1 AT1G73066 35.393 178 105 9 34 203 208 383 2.96e-13 69.7
MS.gene51817.t1 AT3G24240 35.119 168 101 7 34 194 120 286 2.98e-13 69.7
MS.gene51817.t1 AT4G08850 25.954 262 140 7 14 221 184 445 3.61e-13 69.7
MS.gene51817.t1 AT4G08850 32.961 179 102 8 28 189 140 317 4.14e-11 63.5
MS.gene51817.t1 AT4G08850 25.954 262 140 7 14 221 184 445 4.90e-13 69.3
MS.gene51817.t1 AT4G08850 32.961 179 102 8 28 189 140 317 5.92e-11 62.8
MS.gene51817.t1 AT5G06940 31.414 191 122 8 37 219 93 282 5.12e-13 68.9
MS.gene51817.t1 AT5G06940 30.180 222 97 10 34 198 138 358 1.79e-11 64.3
MS.gene51817.t1 AT2G19330 29.741 232 132 7 24 227 64 292 5.33e-13 68.6
MS.gene51817.t1 AT3G47090 32.447 188 119 8 36 216 354 540 8.50e-13 68.6
MS.gene51817.t1 AT5G20480 29.891 184 119 6 46 224 419 597 9.46e-13 68.2
MS.gene51817.t1 AT5G20480 29.412 187 126 6 36 216 361 547 3.99e-12 66.6
MS.gene51817.t1 AT5G20480 29.891 184 119 6 46 224 419 597 9.46e-13 68.2
MS.gene51817.t1 AT5G20480 29.412 187 126 6 36 216 361 547 3.99e-12 66.6
MS.gene51817.t1 AT4G26540 31.100 209 131 10 36 233 134 340 1.29e-12 67.8
MS.gene51817.t1 AT4G26540 30.769 182 120 5 59 234 109 290 6.29e-12 65.9
MS.gene51817.t1 AT3G25670 36.913 149 90 4 77 221 150 298 1.34e-12 67.4
MS.gene51817.t1 AT1G17230 31.841 201 128 9 27 219 458 657 1.36e-12 67.8
MS.gene51817.t1 AT5G25930 33.951 162 96 8 49 201 287 446 1.38e-12 67.8
MS.gene51817.t1 AT1G17230 31.527 203 130 9 25 219 456 657 1.62e-12 67.8
MS.gene51817.t1 AT1G17230 31.841 201 128 9 27 219 458 657 1.68e-12 67.4
MS.gene51817.t1 AT1G29730 32.258 186 113 9 44 218 122 305 2.14e-12 67.4
MS.gene51817.t1 AT5G48940 35.088 171 101 7 48 211 134 301 3.95e-12 66.6
MS.gene51817.t1 AT5G48940 34.555 191 116 9 36 219 412 600 7.71e-11 62.8
MS.gene51817.t1 AT5G56040 34.694 196 115 7 44 226 96 291 4.07e-12 66.2
MS.gene51817.t1 AT5G56040 34.694 196 115 7 44 226 96 291 4.77e-12 66.2
MS.gene51817.t1 AT5G62230 30.168 179 96 5 25 174 267 445 7.32e-12 65.5
MS.gene51817.t1 AT5G01890 28.641 206 124 9 39 221 380 585 1.34e-11 64.7
MS.gene51817.t1 AT1G09970 30.108 186 124 6 36 216 212 396 1.56e-11 64.7
MS.gene51817.t1 AT2G26330 32.195 205 124 10 25 219 97 296 1.64e-11 64.7
MS.gene51817.t1 AT1G09970 30.108 186 124 6 36 216 212 396 1.69e-11 64.7
MS.gene51817.t1 AT5G62230 34.416 154 94 7 27 174 341 493 1.80e-11 64.3
MS.gene51817.t1 AT1G68780 28.682 258 123 10 37 236 140 394 1.93e-11 63.9
MS.gene51817.t1 AT1G28440 33.158 190 119 8 36 219 222 409 2.01e-11 64.3
MS.gene51817.t1 AT1G73080 32.673 202 122 9 38 226 213 413 2.07e-11 64.3
MS.gene51817.t1 AT5G44700 29.289 239 138 12 28 255 633 851 2.44e-11 64.3
MS.gene51817.t1 AT1G29730 33.333 147 92 6 44 184 122 268 3.76e-11 63.5
MS.gene51817.t1 AT1G69550 34.171 199 111 12 30 212 1039 1233 4.21e-11 63.5
MS.gene51817.t1 AT1G35710 30.172 232 128 9 49 247 323 553 4.26e-11 63.5
MS.gene51817.t1 AT1G35710 32.258 155 99 6 44 192 150 304 8.83e-11 62.4
MS.gene51817.t1 AT2G41820 28.713 202 135 7 44 236 86 287 4.59e-11 63.2
MS.gene51817.t1 AT1G29730 33.333 147 92 6 44 184 122 268 4.71e-11 63.2
MS.gene51817.t1 AT3G11010 31.111 180 118 6 46 219 147 326 4.75e-11 63.2
MS.gene51817.t1 AT1G27170 28.358 201 131 7 56 248 706 901 4.87e-11 63.2
MS.gene51817.t1 AT3G11010 31.111 180 118 6 46 219 84 263 4.90e-11 63.2
MS.gene51817.t1 AT1G29730 33.333 147 92 6 44 184 122 268 4.92e-11 63.2
MS.gene51817.t1 AT1G27170 28.358 201 131 7 56 248 706 901 5.24e-11 63.2
MS.gene51817.t1 AT3G19320 30.539 167 111 5 35 197 240 405 6.64e-11 62.4
MS.gene51817.t1 AT1G31420 34.507 142 87 5 44 179 74 215 8.66e-11 62.4
MS.gene51817.t1 AT1G31420 34.507 142 87 5 44 179 74 215 8.66e-11 62.4
MS.gene51817.t1 AT1G31420 34.507 142 87 5 44 179 74 215 9.07e-11 62.0
MS.gene51817.t1 AT3G28040 31.818 198 121 9 48 233 201 396 9.69e-11 62.4

Find 57 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTTTGGAAGAATTAC+AGG 0.201858 3.4:-16157589 MS.gene51817:CDS
GTTAGTTGATACCTTCAATT+TGG 0.236448 3.4:+16160372 None:intergenic
TGTTGGGAGTTGCTTCTCTT+TGG 0.313743 3.4:-16157601 MS.gene51817:CDS
TGAAATTGATCCATTGATAT+AGG 0.320339 3.4:+16154894 None:intergenic
CAATCTTTCAATAGATTCAT+AGG 0.326451 3.4:+16154951 None:intergenic
CTTAAACTCGTGAACCTTGA+TGG 0.335070 3.4:-16158412 MS.gene51817:CDS
CGATAGACTTCCAGTGAACT+TGG 0.355462 3.4:-16158449 MS.gene51817:CDS
GGTTCACGAGTTTAAGAGAT+TGG 0.365330 3.4:+16158419 None:intergenic
AAGCAACTCCCAACAGATTC+CGG 0.366189 3.4:+16157609 None:intergenic
GAATTTGTTAACATCCTTGC+CGG 0.366862 3.4:-16158227 MS.gene51817:CDS
CTCAAACTGCCAATAGTTGC+CGG 0.374395 3.4:+16158208 None:intergenic
ACATCCTTGCCGGCAACTAT+TGG 0.386833 3.4:-16158217 MS.gene51817:CDS
TAGGATTACCATGCAGTGAT+AGG 0.397631 3.4:+16154913 None:intergenic
AAGAAATTCGATTTCCATCA+AGG 0.405385 3.4:+16158398 None:intergenic
GCGTGAGATTCTAGTGGCTT+TGG 0.411238 3.4:+16160429 None:intergenic
AGGAGAGAATTACATTCATC+TGG 0.419154 3.4:+16158370 None:intergenic
AGCGTTCAAGCCTTACTAAC+TGG 0.424737 3.4:+16158263 None:intergenic
ATCAATGGATCAATTTCAAC+AGG 0.429193 3.4:-16154889 MS.gene51817:intron
TCTAAATCGATGATTTCATC+TGG 0.432065 3.4:+16159057 None:intergenic
GACACCCTCATCGAGACCTT+TGG 0.441111 3.4:+16154705 None:intergenic
TTTGCGTGATTCCAAATTGA+AGG 0.441568 3.4:-16160383 MS.gene51817:intron
TAACAAGTTACAGTCACTTC+CGG 0.450974 3.4:-16157628 MS.gene51817:CDS
AATCAATTTGCTAATTTCCA+CGG 0.469479 3.4:+16158810 None:intergenic
TGGAGTTTCCCCAAGTTCAC+TGG 0.469928 3.4:+16158439 None:intergenic
GCATGGTAATCCTATATCAA+TGG 0.479080 3.4:-16154904 MS.gene51817:CDS
GACTTAACGCATAATCGAAT+AGG 0.481716 3.4:-16159015 MS.gene51817:intron
AGTCACTTCCGGAATCTGTT+GGG 0.483565 3.4:-16157617 MS.gene51817:CDS
ATCTCACGCTGGCGATCCAC+CGG 0.491881 3.4:-16160415 MS.gene51817:CDS
CTTGAACGCTTATCCATCGC+AGG 0.509815 3.4:-16158250 MS.gene51817:CDS
ATCAATTTGCTAATTTCCAC+GGG 0.510652 3.4:+16158811 None:intergenic
ATTGATTAATGTGCAGCGCC+TGG 0.519495 3.4:-16158794 MS.gene51817:intron
AGACAACAATAATGTGAAGC+AGG 0.526925 3.4:-16156772 MS.gene51817:intron
GATAGACTTCCAGTGAACTT+GGG 0.527043 3.4:-16158448 MS.gene51817:CDS
TGTCAATGATCCAGATGGAC+GGG 0.537840 3.4:-16154798 MS.gene51817:intron
TGTTAACAAATTCCCTGCGA+TGG 0.540710 3.4:+16158237 None:intergenic
ACCAACATCGCAGATATTAG+CGG 0.543007 3.4:-16158482 MS.gene51817:intron
CAGTCACTTCCGGAATCTGT+TGG 0.543142 3.4:-16157618 MS.gene51817:CDS
ATTGATTCAAACGTAATGAT+CGG 0.547957 3.4:-16154730 MS.gene51817:CDS
TCGATTTAGACAGATCTGTT+CGG 0.549694 3.4:-16159044 MS.gene51817:CDS
TTCAAGAGTTTGAAGCAAGA+CGG 0.553299 3.4:-16154774 MS.gene51817:CDS
ATCACGCAAAGCAACAATGC+CGG 0.561384 3.4:+16160396 None:intergenic
ACTGCCAATAGTTGCCGGCA+AGG 0.568524 3.4:+16158213 None:intergenic
TTGGAAGAATTACAGGCCAA+TGG 0.576654 3.4:-16157582 MS.gene51817:intron
AGAATTACATTCATCTGGCA+AGG 0.582141 3.4:+16158375 None:intergenic
TTGTCAATGATCCAGATGGA+CGG 0.591351 3.4:-16154799 MS.gene51817:intron
AACGTAATGATCGGTTCCAA+AGG 0.592071 3.4:-16154721 MS.gene51817:CDS
ATAGACTTCCAGTGAACTTG+GGG 0.597386 3.4:-16158447 MS.gene51817:CDS
CTTCAAAACCTATCACTGCA+TGG 0.611064 3.4:-16154921 MS.gene51817:CDS
GGTTCCAAAGGTCTCGATGA+GGG 0.626733 3.4:-16154709 MS.gene51817:CDS
GACTGCAGTTGACATTCCCG+TGG 0.635581 3.4:-16158827 MS.gene51817:intron
ACGCAAAGCAACAATGCCGG+TGG 0.644555 3.4:+16160399 None:intergenic
TCGCCAGCGTGAGATTCTAG+TGG 0.650826 3.4:+16160423 None:intergenic
CGGTTCCAAAGGTCTCGATG+AGG 0.660913 3.4:-16154710 MS.gene51817:CDS
TTGAACGCTTATCCATCGCA+GGG 0.664787 3.4:-16158249 MS.gene51817:CDS
GAGAGATTGCAAACTGACGA+AGG 0.679110 3.4:+16156816 None:intergenic
TCACTGGAAGTCTATCGATG+AGG 0.707550 3.4:+16158455 None:intergenic
AAGCCACTAGAATCTCACGC+TGG 0.734758 3.4:-16160426 MS.gene51817:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGAATAAACAAAATTTAA+TGG + chr3.4:16156489-16156508 None:intergenic 10.0%
!! ATAATATATTATTGTCTTAA+AGG + chr3.4:16156809-16156828 None:intergenic 10.0%
!! GAAAAAATAATTAAAATATG+TGG - chr3.4:16158932-16158951 MS.gene51817:intron 10.0%
!!! TTGTGTTTTTAAATAAAAAA+AGG - chr3.4:16155021-16155040 MS.gene51817:intron 10.0%
!! ACAAATAATTAAACTAAGAT+GGG + chr3.4:16159983-16160002 None:intergenic 15.0%
!! ATAAATAAAAAAACAACTGA+TGG + chr3.4:16155790-16155809 None:intergenic 15.0%
!! TTATCTTTAAATATAAACGA+TGG - chr3.4:16157346-16157365 MS.gene51817:intron 15.0%
!!! AATTGATTCTGTTTTATTAT+TGG - chr3.4:16158761-16158780 MS.gene51817:intron 15.0%
!!! ATTGATTCTGTTTTATTATT+GGG - chr3.4:16158762-16158781 MS.gene51817:intron 15.0%
!!! GTAAATATTGATTTAGAAAT+TGG + chr3.4:16159858-16159877 None:intergenic 15.0%
!!! TAAAATCACTTTTAAATTTG+TGG + chr3.4:16155403-16155422 None:intergenic 15.0%
!!! TATATTTATTTCTATTCCAA+TGG - chr3.4:16157794-16157813 MS.gene51817:intron 15.0%
!!! TATTATTTTTTATCAATCGT+TGG + chr3.4:16156637-16156656 None:intergenic 15.0%
!!! TCATACTTTAAAAGTTATAA+AGG + chr3.4:16157465-16157484 None:intergenic 15.0%
!!! TTGTGTTTATTTAATTTTAC+TGG - chr3.4:16157730-16157749 MS.gene51817:intron 15.0%
!!! TTTGATTGATAAGTTTTATA+TGG - chr3.4:16154936-16154955 MS.gene51817:CDS 15.0%
!! AAAGCATAAAACAATACAAA+CGG + chr3.4:16158055-16158074 None:intergenic 20.0%
!! AAATAATCTTGAGTGTTAAA+AGG + chr3.4:16157309-16157328 None:intergenic 20.0%
!! AAATTACTTGAATTAATGCT+TGG - chr3.4:16159593-16159612 MS.gene51817:intron 20.0%
!! AAATTCTTCAAAAGCAAAAA+TGG + chr3.4:16159538-16159557 None:intergenic 20.0%
!! AATAACTATGTTACTCTATT+TGG - chr3.4:16155682-16155701 MS.gene51817:intron 20.0%
!! AATAATCTTGAGTGTTAAAA+GGG + chr3.4:16157308-16157327 None:intergenic 20.0%
!! AATGTAAAGTGATTTATGTT+TGG - chr3.4:16155099-16155118 MS.gene51817:intron 20.0%
!! ACACAAAAAAGAAAATGAAA+AGG + chr3.4:16154820-16154839 None:intergenic 20.0%
!! AGTTATTTGAACATCAATTT+AGG + chr3.4:16155669-16155688 None:intergenic 20.0%
!! ATTTCAACTCAAATGATAAA+AGG - chr3.4:16154975-16154994 MS.gene51817:intron 20.0%
!! CTTATATTATCTCATAGAAT+TGG + chr3.4:16158961-16158980 None:intergenic 20.0%
!! GAATAGAAATAAATATAGCA+AGG + chr3.4:16157791-16157810 None:intergenic 20.0%
!! GACAAATAATTAAACTAAGA+TGG + chr3.4:16159984-16160003 None:intergenic 20.0%
!! TAATGAATTAGTGTTAGATT+TGG - chr3.4:16155327-16155346 MS.gene51817:intron 20.0%
!! TGTAAAAATTGGAAATAGTT+TGG - chr3.4:16157686-16157705 MS.gene51817:intron 20.0%
!! TTGAAGCCAAATAATAATAA+AGG + chr3.4:16158254-16158273 None:intergenic 20.0%
!! TTTATATTGCTTATGCAATT+TGG - chr3.4:16157017-16157036 MS.gene51817:intron 20.0%
!!! ACAGAATTTTATTAAAAGCA+TGG + chr3.4:16160090-16160109 None:intergenic 20.0%
!!! ACTACATTTTATCTTATGTT+TGG - chr3.4:16156433-16156452 MS.gene51817:intron 20.0%
!!! ACTTTAAAAGTTATAAAGGT+GGG + chr3.4:16157461-16157480 None:intergenic 20.0%
!!! AGTTCGTTAATTAGTTTTTA+TGG - chr3.4:16155891-16155910 MS.gene51817:intron 20.0%
!!! ATAAAAGTTTGATGATATCT+AGG + chr3.4:16157002-16157021 None:intergenic 20.0%
!!! ATTTTTTCGAGAATGTAATA+AGG + chr3.4:16158920-16158939 None:intergenic 20.0%
!!! CGATTCTAATTATTTGATTT+TGG - chr3.4:16154844-16154863 MS.gene51817:intron 20.0%
!!! TAACGAACTAACTATTTTTT+GGG + chr3.4:16155880-16155899 None:intergenic 20.0%
!!! TAATCGTATGTTTTGTTTTT+TGG - chr3.4:16155045-16155064 MS.gene51817:intron 20.0%
!!! TACTTTAAAAGTTATAAAGG+TGG + chr3.4:16157462-16157481 None:intergenic 20.0%
!!! TTAACGAACTAACTATTTTT+TGG + chr3.4:16155881-16155900 None:intergenic 20.0%
! AAGCCAAATAATAATAAAGG+TGG + chr3.4:16158251-16158270 None:intergenic 25.0%
! ACATATTTCAGCTTATCTAT+TGG - chr3.4:16159190-16159209 MS.gene51817:intron 25.0%
! AGTGTTTAAGAAATAAATGC+TGG + chr3.4:16156416-16156435 None:intergenic 25.0%
! ATCATAATTTCAGCTAACAA+TGG + chr3.4:16157430-16157449 None:intergenic 25.0%
! ATGGAATTCACAAATTATGA+CGG - chr3.4:16159063-16159082 MS.gene51817:CDS 25.0%
! ATTACATAAACTCGTAGAAT+CGG + chr3.4:16160142-16160161 None:intergenic 25.0%
! CAATCTTTCAATAGATTCAT+AGG + chr3.4:16160208-16160227 None:intergenic 25.0%
! CATTAAACAAAAACTTCCAT+TGG + chr3.4:16157813-16157832 None:intergenic 25.0%
! CTCAAAGGAAAAAACATATA+TGG - chr3.4:16159044-16159063 MS.gene51817:CDS 25.0%
! GAACTGAATTAGTGTATATT+TGG + chr3.4:16155296-16155315 None:intergenic 25.0%
! GGTTAGTAAATTCCATTATA+TGG + chr3.4:16155382-16155401 None:intergenic 25.0%
! GTAAGTTAGTACATAAAAGA+GGG + chr3.4:16156851-16156870 None:intergenic 25.0%
! TAAAATATCATGTTCTTACC+AGG + chr3.4:16156383-16156402 None:intergenic 25.0%
! TAGTCCAATAGCAAAAAAAA+GGG + chr3.4:16158609-16158628 None:intergenic 25.0%
! TGAAATATGTAAATCCAAAC+AGG + chr3.4:16159180-16159199 None:intergenic 25.0%
! TGAAATTGATCCATTGATAT+AGG + chr3.4:16160265-16160284 None:intergenic 25.0%
! TGTAAGTTAGTACATAAAAG+AGG + chr3.4:16156852-16156871 None:intergenic 25.0%
! TTTAAGAAATAAATGCTGGA+AGG + chr3.4:16156412-16156431 None:intergenic 25.0%
! TTTATGGAAGAACATATGTT+GGG - chr3.4:16155907-16155926 MS.gene51817:intron 25.0%
!! ATTGATTCAAACGTAATGAT+CGG - chr3.4:16160426-16160445 MS.gene51817:CDS 25.0%
!! GATAATGATAACCTTTTAAG+AGG + chr3.4:16156266-16156285 None:intergenic 25.0%
!! TAAATTGCATTTGGGATAAT+CGG - chr3.4:16159130-16159149 MS.gene51817:intron 25.0%
!! TAAGCAAACCACAATATTTT+GGG - chr3.4:16158133-16158152 MS.gene51817:intron 25.0%
!! TACACCCTTAAAATCAATTT+TGG - chr3.4:16155250-16155269 MS.gene51817:intron 25.0%
!! TTAAGCAAACCACAATATTT+TGG - chr3.4:16158132-16158151 MS.gene51817:intron 25.0%
!! TTTTATGGAAGAACATATGT+TGG - chr3.4:16155906-16155925 MS.gene51817:intron 25.0%
!!! AACGAACTAACTATTTTTTG+GGG + chr3.4:16155879-16155898 None:intergenic 25.0%
!!! AATCAATTTGCTAATTTCCA+CGG + chr3.4:16156349-16156368 None:intergenic 25.0%
!!! ACAGTGTATTTTGTTTTTAG+TGG - chr3.4:16156869-16156888 MS.gene51817:intron 25.0%
!!! ATCTTTCATTTGTTTTTCCA+TGG - chr3.4:16156557-16156576 MS.gene51817:intron 25.0%
!!! ATTCACGTTTTTGATTGATT+TGG - chr3.4:16154867-16154886 MS.gene51817:intron 25.0%
!!! CAATGGAAGTTTTTGTTTAA+TGG - chr3.4:16157811-16157830 MS.gene51817:intron 25.0%
!!! CAGTGTATTTTGTTTTTAGT+GGG - chr3.4:16156870-16156889 MS.gene51817:intron 25.0%
!!! CATATATGTTTTTTCCTTTG+AGG + chr3.4:16159046-16159065 None:intergenic 25.0%
!!! CTTTAAGACAAATTTAAACC+TGG - chr3.4:16157876-16157895 MS.gene51817:intron 25.0%
!!! TGTTTTTATAAGCTATCCTA+GGG + chr3.4:16159247-16159266 None:intergenic 25.0%
!!! TTTTATGCTTTCTAGTTACT+TGG - chr3.4:16158064-16158083 MS.gene51817:intron 25.0%
!!! TTTTTGATTGATTTGGTTCA+TGG - chr3.4:16154874-16154893 MS.gene51817:intron 25.0%
!!! TTTTTTGGATGAATTGATTC+TGG - chr3.4:16155060-16155079 MS.gene51817:intron 25.0%
AAAACCATTTCTCTTGTGAT+TGG - chr3.4:16158181-16158200 MS.gene51817:intron 30.0%
AAAAGGGTGAAACAAATATG+TGG + chr3.4:16158593-16158612 None:intergenic 30.0%
AACCAAAACGTATGTACAAA+AGG + chr3.4:16156183-16156202 None:intergenic 30.0%
AAGAAATTCGATTTCCATCA+AGG + chr3.4:16156761-16156780 None:intergenic 30.0%
AAGACAAATTTAAACCTGGT+TGG - chr3.4:16157880-16157899 MS.gene51817:intron 30.0%
AAGGAAAATGAAAGATAGCA+AGG + chr3.4:16156064-16156083 None:intergenic 30.0%
ACATAGTGTAAATTAGGTGT+AGG - chr3.4:16160062-16160081 MS.gene51817:intron 30.0%
ACTATCAATCAACATACCAT+TGG + chr3.4:16157593-16157612 None:intergenic 30.0%
ACTCAATATGTTCTGATCAA+AGG - chr3.4:16159560-16159579 MS.gene51817:intron 30.0%
AGAATCAAAAGCTCAAATTC+TGG - chr3.4:16155177-16155196 MS.gene51817:intron 30.0%
AGATGAATTCAGACAGTTAA+AGG + chr3.4:16159431-16159450 None:intergenic 30.0%
AGCCAAGTTAAATTGCATTT+GGG - chr3.4:16159122-16159141 MS.gene51817:intron 30.0%
ATAAAACAATACAAACGGCA+TGG + chr3.4:16158050-16158069 None:intergenic 30.0%
ATCAATGGATCAATTTCAAC+AGG - chr3.4:16160267-16160286 MS.gene51817:intron 30.0%
ATCCCAAATGCAATTTAACT+TGG + chr3.4:16159127-16159146 None:intergenic 30.0%
ATTCTTTCAACATGCATGAA+TGG - chr3.4:16159790-16159809 MS.gene51817:intron 30.0%
ATTTCTATGATTGTCAAGTC+TGG - chr3.4:16158206-16158225 MS.gene51817:CDS 30.0%
CTAGTCCAATAGCAAAAAAA+AGG + chr3.4:16158610-16158629 None:intergenic 30.0%
CTATGCACATAGTGTAAATT+AGG - chr3.4:16160056-16160075 MS.gene51817:intron 30.0%
CTTTCTAATCTGCTTGTATT+TGG - chr3.4:16155436-16155455 MS.gene51817:intron 30.0%
GAAAAAGAAGAGTAGAAATC+CGG + chr3.4:16160306-16160325 None:intergenic 30.0%
GATAATGTAGCTTGAATATG+AGG - chr3.4:16159754-16159773 MS.gene51817:intron 30.0%
GCAACTAAATAGCCATATAA+TGG - chr3.4:16155367-16155386 MS.gene51817:intron 30.0%
TCTAAATCGATGATTTCATC+TGG + chr3.4:16156102-16156121 None:intergenic 30.0%
TGCTAAAATAAACACACGTA+CGG - chr3.4:16158639-16158658 MS.gene51817:intron 30.0%
TGGAATTCACAAATTATGAC+GGG - chr3.4:16159064-16159083 MS.gene51817:CDS 30.0%
TTATGGAAGAACATATGTTG+GGG - chr3.4:16155908-16155927 MS.gene51817:intron 30.0%
TTTAACTGTCTGAATTCATC+TGG - chr3.4:16159430-16159449 MS.gene51817:intron 30.0%
TTTACTGAAGAGTCTCAATT+TGG - chr3.4:16158102-16158121 MS.gene51817:intron 30.0%
TTTGTCCGTTAAGTTTGAAT+TGG - chr3.4:16159920-16159939 MS.gene51817:intron 30.0%
! AAATTGCATTTGGGATAATC+GGG - chr3.4:16159131-16159150 MS.gene51817:intron 30.0%
! AAGCAAACCACAATATTTTG+GGG - chr3.4:16158134-16158153 MS.gene51817:intron 30.0%
! ACCCTTAAAATCAATTTTGG+TGG - chr3.4:16155253-16155272 MS.gene51817:intron 30.0%
! ACTAGCTGCATTTTACAATT+AGG - chr3.4:16159652-16159671 MS.gene51817:intron 30.0%
! AGAATTGATTCTGACATGTT+TGG + chr3.4:16155231-16155250 None:intergenic 30.0%
! ATATTGTGTAACTTGCAGTA+TGG + chr3.4:16159356-16159375 None:intergenic 30.0%
! ATTTGGAATACCTGAAATCA+TGG - chr3.4:16155453-16155472 MS.gene51817:intron 30.0%
! ATTTGGTTTCACTTCTAGAT+GGG + chr3.4:16155279-16155298 None:intergenic 30.0%
! CATTTTGAACTCATGCTTTT+TGG - chr3.4:16156505-16156524 MS.gene51817:intron 30.0%
! GTTAGGTTTTTCCATACAAA+GGG - chr3.4:16159710-16159729 MS.gene51817:intron 30.0%
! GTTAGTTGATACCTTCAATT+TGG + chr3.4:16154787-16154806 None:intergenic 30.0%
! TATTTGGTTTCACTTCTAGA+TGG + chr3.4:16155280-16155299 None:intergenic 30.0%
! TTAGGTTTTTCCATACAAAG+GGG - chr3.4:16159711-16159730 MS.gene51817:intron 30.0%
! TTCCTTTTGTACATACGTTT+TGG - chr3.4:16156178-16156197 MS.gene51817:intron 30.0%
!! ATCAATTTGCTAATTTCCAC+GGG + chr3.4:16156348-16156367 None:intergenic 30.0%
!! ATTGATTTGGTTCATGGATA+AGG - chr3.4:16154880-16154899 MS.gene51817:intron 30.0%
!! CAAAATGACAGTTTTGTGAA+AGG - chr3.4:16155812-16155831 MS.gene51817:intron 30.0%
!! CTTTCACAAAACTGTCATTT+TGG + chr3.4:16155814-16155833 None:intergenic 30.0%
!! GCCACCAAAATTGATTTTAA+GGG + chr3.4:16155257-16155276 None:intergenic 30.0%
!! TCACAAGAGAAATGGTTTTA+TGG + chr3.4:16158180-16158199 None:intergenic 30.0%
!!! CTGTTTTTATAAGCTATCCT+AGG + chr3.4:16159248-16159267 None:intergenic 30.0%
!!! GTGTGTTTATTTTAGCATGT+TGG + chr3.4:16158636-16158655 None:intergenic 30.0%
!!! TCTGTGTGTGTATTTTTTTG+AGG - chr3.4:16156027-16156046 MS.gene51817:intron 30.0%
!!! TTCACCCTTTTTTTTGCTAT+TGG - chr3.4:16158602-16158621 MS.gene51817:intron 30.0%
!!! TTTTTTTGCTATTGGACTAG+TGG - chr3.4:16158610-16158629 MS.gene51817:intron 30.0%
AAGTATAGAGAGAGAGGAAA+AGG - chr3.4:16158795-16158814 MS.gene51817:CDS 35.0%
AATTTCTTATGCAAGGTCTC+GGG + chr3.4:16157948-16157967 None:intergenic 35.0%
ACGTTATTGACCATGATTTC+AGG + chr3.4:16155466-16155485 None:intergenic 35.0%
AGAATTACATTCATCTGGCA+AGG + chr3.4:16156784-16156803 None:intergenic 35.0%
AGACAACAATAATGTGAAGC+AGG - chr3.4:16158384-16158403 MS.gene51817:CDS 35.0%
AGGAGAGAATTACATTCATC+TGG + chr3.4:16156789-16156808 None:intergenic 35.0%
AGTTGGATGTTCCTCATAAA+AGG + chr3.4:16158559-16158578 None:intergenic 35.0%
ATACCTTAGTGATGTAATGC+TGG - chr3.4:16158419-16158438 MS.gene51817:CDS 35.0%
ATAGCCAATCACAAGAGAAA+TGG + chr3.4:16158188-16158207 None:intergenic 35.0%
ATTCAGACAGTTAAAGGCAA+TGG + chr3.4:16159425-16159444 None:intergenic 35.0%
ATTTCTGAATTGCATGAGCA+TGG - chr3.4:16157629-16157648 MS.gene51817:CDS 35.0%
ATTTGTCTGTTTCGCTATTG+TGG - chr3.4:16159997-16160016 MS.gene51817:intron 35.0%
ATTTGTGTTCTTGTCTAGTC+TGG - chr3.4:16159954-16159973 MS.gene51817:intron 35.0%
CATGCTTACTTTCTAATCGA+AGG - chr3.4:16157269-16157288 MS.gene51817:intron 35.0%
CCTAACGCAAAGAAAAAAAC+AGG + chr3.4:16159696-16159715 None:intergenic 35.0%
CGGATATTATCTAACAAGCA+TGG + chr3.4:16157238-16157257 None:intergenic 35.0%
CTAAAATAAACACACGTACG+GGG - chr3.4:16158641-16158660 MS.gene51817:intron 35.0%
CTGCAAGTTACACAATATTC+CGG - chr3.4:16159358-16159377 MS.gene51817:intron 35.0%
CTTCAAGCACGTATAAATAC+AGG + chr3.4:16156005-16156024 None:intergenic 35.0%
GAATTTCTTATGCAAGGTCT+CGG + chr3.4:16157949-16157968 None:intergenic 35.0%
GACTTAACGCATAATCGAAT+AGG - chr3.4:16156141-16156160 MS.gene51817:intron 35.0%
GAGCCAAGTTAAATTGCATT+TGG - chr3.4:16159121-16159140 MS.gene51817:intron 35.0%
GCATGGTAATCCTATATCAA+TGG - chr3.4:16160252-16160271 MS.gene51817:intron 35.0%
GCGCCACCTTTATTATTATT+TGG - chr3.4:16158245-16158264 MS.gene51817:CDS 35.0%
GCTAAAATAAACACACGTAC+GGG - chr3.4:16158640-16158659 MS.gene51817:intron 35.0%
GGGAATGTTAGTTCGTTAAA+TGG - chr3.4:16155929-16155948 MS.gene51817:intron 35.0%
GTAAGCATGTCAACAGAAAA+CGG + chr3.4:16157258-16157277 None:intergenic 35.0%
GTCTTAAAACCAACATTGCA+AGG + chr3.4:16157976-16157995 None:intergenic 35.0%
GTCTTTAAGTATAGAGAGAG+AGG - chr3.4:16158789-16158808 MS.gene51817:intron 35.0%
GTGTCTTCAAATGTATGACA+TGG + chr3.4:16157158-16157177 None:intergenic 35.0%
GTTAATTCCATAAACTCCCT+AGG - chr3.4:16159228-16159247 MS.gene51817:intron 35.0%
TAACAAGTTACAGTCACTTC+CGG - chr3.4:16157528-16157547 MS.gene51817:intron 35.0%
TATGGAAGAACATATGTTGG+GGG - chr3.4:16155909-16155928 MS.gene51817:intron 35.0%
TCAACTCTTCCAAATGATAG+TGG + chr3.4:16159823-16159842 None:intergenic 35.0%
TCGATTTAGACAGATCTGTT+CGG - chr3.4:16156112-16156131 MS.gene51817:intron 35.0%
TCTGTATTAAGCGAACTCTT+AGG - chr3.4:16160105-16160124 MS.gene51817:intron 35.0%
TCTTTCATCTTTGTACCTTG+AGG - chr3.4:16155953-16155972 MS.gene51817:intron 35.0%
TGAATGTCTTAGTGATACCT+TGG - chr3.4:16160164-16160183 MS.gene51817:intron 35.0%
TGACATATTGACCTATGACT+TGG - chr3.4:16157376-16157395 MS.gene51817:intron 35.0%
TTCAGACAGTTAAAGGCAAT+GGG + chr3.4:16159424-16159443 None:intergenic 35.0%
TTCTTCACCCCAAAATATTG+TGG + chr3.4:16158144-16158163 None:intergenic 35.0%
TTTGCGTGATTCCAAATTGA+AGG - chr3.4:16154773-16154792 MS.gene51817:CDS 35.0%
TTTGTGTTCTTGTCTAGTCT+GGG - chr3.4:16159955-16159974 MS.gene51817:intron 35.0%
! AAGGTATCACTAAGACATTC+AGG + chr3.4:16160165-16160184 None:intergenic 35.0%
! CGTTAGGTTTTTCCATACAA+AGG - chr3.4:16159709-16159728 MS.gene51817:intron 35.0%
! CTTCTCTTTGGAAGAATTAC+AGG - chr3.4:16157567-16157586 MS.gene51817:intron 35.0%
! GTTTTTCCATGGTAGAATGT+TGG - chr3.4:16156568-16156587 MS.gene51817:intron 35.0%
! TAGGTTTTTCCATACAAAGG+GGG - chr3.4:16159712-16159731 MS.gene51817:intron 35.0%
! TGATACCTTGGTTTCCTTTT+GGG - chr3.4:16160176-16160195 MS.gene51817:intron 35.0%
! TGTTGATTGTCAGTTCAATG+CGG - chr3.4:16157757-16157776 MS.gene51817:intron 35.0%
! TTCAAGAGTTTGAAGCAAGA+CGG - chr3.4:16160382-16160401 MS.gene51817:intron 35.0%
! TTCCAATTAAAAGAGAGCAC+AGG + chr3.4:16155842-16155861 None:intergenic 35.0%
!! CTGGAAAAGTCTGTTTTTCA+AGG + chr3.4:16156083-16156102 None:intergenic 35.0%
!! GAAGTGCTTTTCCTCTTAAA+AGG - chr3.4:16156252-16156271 MS.gene51817:intron 35.0%
!! GAATTTGTTAACATCCTTGC+CGG - chr3.4:16156929-16156948 MS.gene51817:intron 35.0%
!! GCTTCATTTCTGAAATGTCT+TGG + chr3.4:16157130-16157149 None:intergenic 35.0%
!! GGCCACCAAAATTGATTTTA+AGG + chr3.4:16155258-16155277 None:intergenic 35.0%
!! TAGCTACTCATTGATTCAAG+TGG - chr3.4:16156461-16156480 MS.gene51817:intron 35.0%
!! TGCTTTTTGGACACATCTTA+TGG - chr3.4:16156518-16156537 MS.gene51817:intron 35.0%
!!! CCTGTTTTTTTCTTTGCGTT+AGG - chr3.4:16159693-16159712 MS.gene51817:intron 35.0%
!!! TTTTTTCCTTTGAGGAAGAC+AGG + chr3.4:16159038-16159057 None:intergenic 35.0%
AAAATGCAGCTAGTCATCGA+GGG + chr3.4:16159646-16159665 None:intergenic 40.0%
AAACCACTAGGCTGTAACAA+CGG - chr3.4:16158723-16158742 MS.gene51817:intron 40.0%
AACTGTCTGAATTCATCTGG+TGG - chr3.4:16159433-16159452 MS.gene51817:intron 40.0%
AAGAGGTCAACAAAGCATGA+TGG + chr3.4:16158517-16158536 None:intergenic 40.0%
AAGCTATCCTAGGGAGTTTA+TGG + chr3.4:16159238-16159257 None:intergenic 40.0%
AATTCGAGACCTTGCAATGT+TGG - chr3.4:16157964-16157983 MS.gene51817:intron 40.0%
ACCAACATCGCAGATATTAG+CGG - chr3.4:16156674-16156693 MS.gene51817:intron 40.0%
AGTCCAGCATTACATCACTA+AGG + chr3.4:16158425-16158444 None:intergenic 40.0%
ATAGACTTCCAGTGAACTTG+GGG - chr3.4:16156709-16156728 MS.gene51817:intron 40.0%
ATGTGGTTTCACACTACAGT+TGG + chr3.4:16158576-16158595 None:intergenic 40.0%
ATTCTACCTGTCTTCCTCAA+AGG - chr3.4:16159029-16159048 MS.gene51817:CDS 40.0%
CCATTACCAACATTCTACCA+TGG + chr3.4:16156577-16156596 None:intergenic 40.0%
CGCTCTTTCGCTGTAAAAAT+TGG - chr3.4:16157675-16157694 MS.gene51817:intron 40.0%
CTATTGGCACAACACTTGTA+AGG - chr3.4:16159206-16159225 MS.gene51817:intron 40.0%
CTCATGCAAATCCAAGTCAT+AGG + chr3.4:16157390-16157409 None:intergenic 40.0%
CTTAAACTCGTGAACCTTGA+TGG - chr3.4:16156744-16156763 MS.gene51817:intron 40.0%
CTTCAAAACCTATCACTGCA+TGG - chr3.4:16160235-16160254 MS.gene51817:intron 40.0%
CTTGAGGAAATCCAAACTCT+CGG - chr3.4:16155969-16155988 MS.gene51817:intron 40.0%
GATAGACTTCCAGTGAACTT+GGG - chr3.4:16156708-16156727 MS.gene51817:intron 40.0%
GCACGCCAATTCAAACTTAA+CGG + chr3.4:16159928-16159947 None:intergenic 40.0%
GCATTTGTCAATGATCCAGA+TGG - chr3.4:16160353-16160372 MS.gene51817:intron 40.0%
GGGATAATCGGGTAAGAATT+GGG - chr3.4:16159142-16159161 MS.gene51817:intron 40.0%
GGTCTCGAATTTCTTATGCA+AGG + chr3.4:16157955-16157974 None:intergenic 40.0%
GGTTATTCGCCACTATCATT+TGG - chr3.4:16159811-16159830 MS.gene51817:intron 40.0%
GGTTCACGAGTTTAAGAGAT+TGG + chr3.4:16156740-16156759 None:intergenic 40.0%
GTCATCGAGGGAAGTTAATT+TGG + chr3.4:16159634-16159653 None:intergenic 40.0%
TAAAATGCAGCTAGTCATCG+AGG + chr3.4:16159647-16159666 None:intergenic 40.0%
TAGGATTACCATGCAGTGAT+AGG + chr3.4:16160246-16160265 None:intergenic 40.0%
TCAGACAGTTAAAGGCAATG+GGG + chr3.4:16159423-16159442 None:intergenic 40.0%
TGGGATAATCGGGTAAGAAT+TGG - chr3.4:16159141-16159160 MS.gene51817:intron 40.0%
TGTAAATCCAAACAGGCTCA+AGG + chr3.4:16159173-16159192 None:intergenic 40.0%
TGTTAACAAATTCCCTGCGA+TGG + chr3.4:16156922-16156941 None:intergenic 40.0%
TTCATAGGTATCTGCCCAAA+AGG + chr3.4:16160193-16160212 None:intergenic 40.0%
TTGGAAGAATTACAGGCCAA+TGG - chr3.4:16157574-16157593 MS.gene51817:intron 40.0%
TTGTCAATGATCCAGATGGA+CGG - chr3.4:16160357-16160376 MS.gene51817:intron 40.0%
! AACAAAGCGTTCCTCATAAG+AGG + chr3.4:16158534-16158553 None:intergenic 40.0%
! AACAGGTATGCTCTTGTTTC+CGG - chr3.4:16160284-16160303 MS.gene51817:intron 40.0%
! AACGTAATGATCGGTTCCAA+AGG - chr3.4:16160435-16160454 MS.gene51817:CDS 40.0%
! ATCGAGGGAAGTTAATTTGG+TGG + chr3.4:16159631-16159650 None:intergenic 40.0%
! CACCTGTGCTCTCTTTTAAT+TGG - chr3.4:16155837-16155856 MS.gene51817:intron 40.0%
! CCATGGTAGAATGTTGGTAA+TGG - chr3.4:16156574-16156593 MS.gene51817:intron 40.0%
! CGACATTTTATGTGGAATCC+CGG + chr3.4:16158695-16158714 None:intergenic 40.0%
! CTATGACTTGGATTTGCATG+AGG - chr3.4:16157388-16157407 MS.gene51817:intron 40.0%
! GACATTTTATGTGGAATCCC+GGG + chr3.4:16158694-16158713 None:intergenic 40.0%
! GCGAACTCTTAGGATTTTAC+TGG - chr3.4:16160115-16160134 MS.gene51817:intron 40.0%
! GTGATACCTTGGTTTCCTTT+TGG - chr3.4:16160175-16160194 MS.gene51817:intron 40.0%
! TGCTTTGTTGACCTCTTATG+AGG - chr3.4:16158520-16158539 MS.gene51817:intron 40.0%
! TTTACAGCGAAAGAGCGTAA+GGG + chr3.4:16157672-16157691 None:intergenic 40.0%
!! AGCTCTGACGACATTTTATG+TGG + chr3.4:16158703-16158722 None:intergenic 40.0%
!! AGGAAAAGCACTTCTCTTTG+AGG + chr3.4:16156246-16156265 None:intergenic 40.0%
!! CGCTTTGTTGACCTTTTATG+AGG - chr3.4:16158545-16158564 MS.gene51817:intron 40.0%
!! TTTTACAGCGAAAGAGCGTA+AGG + chr3.4:16157673-16157692 None:intergenic 40.0%
!! TTTTAGTGGGCCAGTTAGTA+AGG - chr3.4:16156883-16156902 MS.gene51817:intron 40.0%
AAATAAACACACGTACGGGG+AGG - chr3.4:16158644-16158663 MS.gene51817:intron 45.0%
AACCACTAGGCTGTAACAAC+GGG - chr3.4:16158724-16158743 MS.gene51817:intron 45.0%
AAGCAACTCCCAACAGATTC+CGG + chr3.4:16157550-16157569 None:intergenic 45.0%
AATAAACACACGTACGGGGA+GGG - chr3.4:16158645-16158664 MS.gene51817:intron 45.0%
AATGGGGTCCTAAAGGATCT+GGG + chr3.4:16159407-16159426 None:intergenic 45.0%
ACTTGGATTTGCATGAGGCT+TGG - chr3.4:16157393-16157412 MS.gene51817:intron 45.0%
AGCGTTCAAGCCTTACTAAC+TGG + chr3.4:16156896-16156915 None:intergenic 45.0%
AGGAAATCCAAACTCTCGGT+CGG - chr3.4:16155973-16155992 MS.gene51817:intron 45.0%
AGGGAAGACCTCAATAAAGG+TGG + chr3.4:16157906-16157925 None:intergenic 45.0%
AGTCACTTCCGGAATCTGTT+GGG - chr3.4:16157539-16157558 MS.gene51817:intron 45.0%
ATCACGCAAAGCAACAATGC+CGG + chr3.4:16154763-16154782 None:intergenic 45.0%
ATCTGCCCAAAAGGAAACCA+AGG + chr3.4:16160184-16160203 None:intergenic 45.0%
ATTGATTAATGTGCAGCGCC+TGG - chr3.4:16156362-16156381 MS.gene51817:intron 45.0%
CAAGCATGGACAACAAACAC+AGG + chr3.4:16157224-16157243 None:intergenic 45.0%
CGAGAGTTTGGATTTCCTCA+AGG + chr3.4:16155971-16155990 None:intergenic 45.0%
CGATAGACTTCCAGTGAACT+TGG - chr3.4:16156707-16156726 MS.gene51817:intron 45.0%
CTCAAACTGCCAATAGTTGC+CGG + chr3.4:16156951-16156970 None:intergenic 45.0%
GAGAGATTGCAAACTGACGA+AGG + chr3.4:16158343-16158362 None:intergenic 45.0%
TAAAGGCAATGGGGTCCTAA+AGG + chr3.4:16159414-16159433 None:intergenic 45.0%
TATACGCATCCCCCTTTGTA+TGG + chr3.4:16159724-16159743 None:intergenic 45.0%
TCACTGGAAGTCTATCGATG+AGG + chr3.4:16156704-16156723 None:intergenic 45.0%
TCCGCTAATATCTGCGATGT+TGG + chr3.4:16156678-16156697 None:intergenic 45.0%
TGTCAATGATCCAGATGGAC+GGG - chr3.4:16160358-16160377 MS.gene51817:intron 45.0%
TGTTGGGAGTTGCTTCTCTT+TGG - chr3.4:16157555-16157574 MS.gene51817:intron 45.0%
TTGAACGCTTATCCATCGCA+GGG - chr3.4:16156907-16156926 MS.gene51817:intron 45.0%
! TGTAACTTGCAGTATGGCCT+CGG + chr3.4:16159350-16159369 None:intergenic 45.0%
!!! TTTTTGGGGTGAATCTAGCG+TGG + chr3.4:16155865-16155884 None:intergenic 45.0%
AAGCCACTAGAATCTCACGC+TGG - chr3.4:16154730-16154749 MS.gene51817:CDS 50.0%
ACATCCTTGCCGGCAACTAT+TGG - chr3.4:16156939-16156958 MS.gene51817:intron 50.0%
ACCACTAGGCTGTAACAACG+GGG - chr3.4:16158725-16158744 MS.gene51817:intron 50.0%
ACTCTTGAAACCCGTCCATC+TGG + chr3.4:16160371-16160390 None:intergenic 50.0%
ATAAACACACGTACGGGGAG+GGG - chr3.4:16158646-16158665 MS.gene51817:intron 50.0%
ATGGGGTCCTAAAGGATCTG+GGG + chr3.4:16159406-16159425 None:intergenic 50.0%
CAATGGGGTCCTAAAGGATC+TGG + chr3.4:16159408-16159427 None:intergenic 50.0%
CACAAGTACTTACACTGCCG+AGG - chr3.4:16159330-16159349 MS.gene51817:intron 50.0%
CAGTCACTTCCGGAATCTGT+TGG - chr3.4:16157538-16157557 MS.gene51817:intron 50.0%
CTCAATAAAGGTGGCCAACC+AGG + chr3.4:16157897-16157916 None:intergenic 50.0%
CTTGAACGCTTATCCATCGC+AGG - chr3.4:16156906-16156925 MS.gene51817:intron 50.0%
GATATCTCCGACCGAGAGTT+TGG + chr3.4:16155983-16156002 None:intergenic 50.0%
GCGTGAGATTCTAGTGGCTT+TGG + chr3.4:16154730-16154749 None:intergenic 50.0%
GGACAAACCCCAGATCCTTT+AGG - chr3.4:16159396-16159415 MS.gene51817:intron 50.0%
GGGAGGGAAGACCTCAATAA+AGG + chr3.4:16157909-16157928 None:intergenic 50.0%
GGTTCCAAAGGTCTCGATGA+GGG - chr3.4:16160447-16160466 MS.gene51817:CDS 50.0%
GGTTTGTCCTCGATGAGGTA+TGG + chr3.4:16159385-16159404 None:intergenic 50.0%
GTCGTCAGAGCTAAACCACT+AGG - chr3.4:16158711-16158730 MS.gene51817:intron 50.0%
TGGAGTTTCCCCAAGTTCAC+TGG + chr3.4:16156720-16156739 None:intergenic 50.0%
! CTGGTTGGCCACCTTTATTG+AGG - chr3.4:16157895-16157914 MS.gene51817:intron 50.0%
! TTTGAGCCTTGTGGTTGGGA+GGG + chr3.4:16157925-16157944 None:intergenic 50.0%
ACGCAAAGCAACAATGCCGG+TGG + chr3.4:16154760-16154779 None:intergenic 55.0%
ACTGCCAATAGTTGCCGGCA+AGG + chr3.4:16156946-16156965 None:intergenic 55.0%
CGGTTCCAAAGGTCTCGATG+AGG - chr3.4:16160446-16160465 MS.gene51817:CDS 55.0%
GACACCCTCATCGAGACCTT+TGG + chr3.4:16160454-16160473 None:intergenic 55.0%
GACTGCAGTTGACATTCCCG+TGG - chr3.4:16156329-16156348 MS.gene51817:intron 55.0%
GGACAGACCTTGAGCCTGTT+TGG - chr3.4:16159163-16159182 MS.gene51817:intron 55.0%
GTCCTCGATGAGGTATGGAC+CGG + chr3.4:16159380-16159399 None:intergenic 55.0%
TAAACACACGTACGGGGAGG+GGG - chr3.4:16158647-16158666 MS.gene51817:intron 55.0%
TCCCCGTTGTTACAGCCTAG+TGG + chr3.4:16158729-16158748 None:intergenic 55.0%
TCGCCAGCGTGAGATTCTAG+TGG + chr3.4:16154736-16154755 None:intergenic 55.0%
TGGAATCCCGGGCTTGAACT+CGG + chr3.4:16158683-16158702 None:intergenic 55.0%
TTCCGGTCCATACCTCATCG+AGG - chr3.4:16159375-16159394 MS.gene51817:intron 55.0%
! CGGGTTTGAGCCTTGTGGTT+GGG + chr3.4:16157929-16157948 None:intergenic 55.0%
! GTTTGAGCCTTGTGGTTGGG+AGG + chr3.4:16157926-16157945 None:intergenic 55.0%
! TCGGGTTTGAGCCTTGTGGT+TGG + chr3.4:16157930-16157949 None:intergenic 55.0%
! TCTGGGGTTTGTCCTCGATG+AGG + chr3.4:16159390-16159409 None:intergenic 55.0%
ATCTCACGCTGGCGATCCAC+CGG - chr3.4:16154741-16154760 MS.gene51817:CDS 60.0%
GGAATCCCGGGCTTGAACTC+GGG + chr3.4:16158682-16158701 None:intergenic 60.0%
GGTCTCGGGTTTGAGCCTTG+TGG + chr3.4:16157934-16157953 None:intergenic 60.0%
GGTCTTCCCTCCCAACCACA+AGG - chr3.4:16157916-16157935 MS.gene51817:intron 60.0%
TGGTGACCCGAGTTCAAGCC+CGG - chr3.4:16158673-16158692 MS.gene51817:intron 60.0%
GGTGACCCGAGTTCAAGCCC+GGG - chr3.4:16158674-16158693 MS.gene51817:intron 65.0%
CACGTACGGGGAGGGGGATG+TGG - chr3.4:16158653-16158672 MS.gene51817:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 16154696 16160482 16154696 ID=MS.gene51817
chr3.4 mRNA 16154696 16160482 16154696 ID=MS.gene51817.t1;Parent=MS.gene51817
chr3.4 exon 16160384 16160482 16160384 ID=MS.gene51817.t1.exon1;Parent=MS.gene51817.t1
chr3.4 CDS 16160384 16160482 16160384 ID=cds.MS.gene51817.t1;Parent=MS.gene51817.t1
chr3.4 exon 16159016 16159085 16159016 ID=MS.gene51817.t1.exon2;Parent=MS.gene51817.t1
chr3.4 CDS 16159016 16159085 16159016 ID=cds.MS.gene51817.t1;Parent=MS.gene51817.t1
chr3.4 exon 16158795 16158841 16158795 ID=MS.gene51817.t1.exon3;Parent=MS.gene51817.t1
chr3.4 CDS 16158795 16158841 16158795 ID=cds.MS.gene51817.t1;Parent=MS.gene51817.t1
chr3.4 exon 16158383 16158491 16158383 ID=MS.gene51817.t1.exon4;Parent=MS.gene51817.t1
chr3.4 CDS 16158383 16158491 16158383 ID=cds.MS.gene51817.t1;Parent=MS.gene51817.t1
chr3.4 exon 16158204 16158289 16158204 ID=MS.gene51817.t1.exon5;Parent=MS.gene51817.t1
chr3.4 CDS 16158204 16158289 16158204 ID=cds.MS.gene51817.t1;Parent=MS.gene51817.t1
chr3.4 exon 16157583 16157673 16157583 ID=MS.gene51817.t1.exon6;Parent=MS.gene51817.t1
chr3.4 CDS 16157583 16157673 16157583 ID=cds.MS.gene51817.t1;Parent=MS.gene51817.t1
chr3.4 exon 16156773 16156858 16156773 ID=MS.gene51817.t1.exon7;Parent=MS.gene51817.t1
chr3.4 CDS 16156773 16156858 16156773 ID=cds.MS.gene51817.t1;Parent=MS.gene51817.t1
chr3.4 exon 16154890 16154976 16154890 ID=MS.gene51817.t1.exon8;Parent=MS.gene51817.t1
chr3.4 CDS 16154890 16154976 16154890 ID=cds.MS.gene51817.t1;Parent=MS.gene51817.t1
chr3.4 exon 16154696 16154806 16154696 ID=MS.gene51817.t1.exon9;Parent=MS.gene51817.t1
chr3.4 CDS 16154696 16154806 16154696 ID=cds.MS.gene51817.t1;Parent=MS.gene51817.t1
Gene Sequence

>MS.gene51817

ATGGGTTGTATAGCTAGCAAAAACGCTGAAACCAAAGCCACTAGAATCTCACGCTGGCGATCCACCGGCATTGTTGCTTTGCGTGATTCCAAATTGAAGGTATCAACTAACTCAATCTTCTCCTTTTCATTTTCTTTTTTGTGTTGTTCGATTCTAATTATTTGATTTTGGATTCACGTTTTTGATTGATTTGGTTCATGGATAAGGTTTATTGATGCAGAAATGTTATTTGAATATCAATTTGATTGATAAGTTTTATATGGTTAATTCTGTATTGTAATTTCAACTCAAATGATAAAAGGTTTTGATGATGAATTTCGCTGTTTTGTGTTTTTAAATAAAAAAAGGTTAATCGTATGTTTTGTTTTTTGGATGAATTGATTCTGGAGAATTGTGTGAGTTGAATGTAAAGTGATTTATGTTTGGATATATTTATGTAATAATGAGTTGAACAATACATTTGAGTGTTATAATCAATTTTAGAATCAAAAGCTCAAATTCTGGATGCAAATTCAATTCTACTCGAGAGCAACCAAACATGTCAGAATCAATTCTACACCCTTAAAATCAATTTTGGTGGCCCATCTAGAAGTGAAACCAAATATACACTAATTCAGTTCACATATATAGTTAATGAATTAGTGTTAGATTTGGTTAATTGATGTATTGTTGCAACTAAATAGCCATATAATGGAATTTACTAACCACAAATTTAAAAGTGATTTTACTTGATTTTCATGCTTTCTAATCTGCTTGTATTTGGAATACCTGAAATCATGGTCAATAACGTTCTAATTTATGTTTAATTAAGTTCATTTGATGATTGATGAGTTGCTTTAATTAAGTTCATTTGATGATTGATGAGTTGCTGAGTCTTGATATATTCATTAACTACTCATTGAAACGAGTTAACTGCATGTGTGAAGTTGTGAGCTGCATTAACTGTTTAGAAAGCGTTGAGTTGTGTTATCCTAAATTGATGTTCAAATAACTATGTTACTCTATTTGGTAGTAGATTGTGAGCTGATTATATTATTTTGTATAGTTAGTTTGTGAATGATAGAGATTCACTTTGTCAAATTTTTATATAACCATCAGTTGTTTTTTTATTTATTCCAAAATGACAGTTTTGTGAAAGGAACACCTGTGCTCTCTTTTAATTGGAACCACGCTAGATTCACCCCAAAAAATAGTTAGTTCGTTAATTAGTTTTTATGGAAGAACATATGTTGGGGGAATGTTAGTTCGTTAAATGGATCTTTCATCTTTGTACCTTGAGGAAATCCAAACTCTCGGTCGGAGATATCCTGTATTTATACGTGCTTGAAGTTTCTGTGTGTGTATTTTTTTGAGGAAACATACTTACCTTGCTATCTTTCATTTTCCTTGAAAAACAGACTTTTCCAGATGAAATCATCGATTTAGACAGATCTGTTCGGACTCTTGACTTAACGCATAATCGAATAGGTAAACAATTTTTCTTTCCTTTTGTACATACGTTTTGGTTAAGAAAGCTTTACTCTGAAGTAGTTGTAATAATATTTTAACCTCAAAGAGAAGTGCTTTTCCTCTTAAAAGGTTATCATTATCATTGTTGATGCTGTTATTTTATTGCTAATAAGTTTATTTTATTGACTGCAGTTGACATTCCCGTGGAAATTAGCAAATTGATTAATGTGCAGCGCCTGGTAAGAACATGATATTTTACTTTATCCTTCCAGCATTTATTTCTTAAACACTACATTTTATCTTATGTTTGGAAGTTTAGCTACTCATTGATTCAAGTGGAACCATTAAATTTTGTTTATTCATTTTGAACTCATGCTTTTTGGACACATCTTATGGATCTAAGCACAATGCTATCTTTCATTTGTTTTTCCATGGTAGAATGTTGGTAATGGTTGCATTATCATTTTTATTAGTGCTGTACTGAAGTTGCCAACGATTGATAAAAAATAATATTGCATACTGAAGTTTCACCAACATCGCAGATATTAGCGGACAACCTCATCGATAGACTTCCAGTGAACTTGGGGAAACTCCAATCTCTTAAACTCGTGAACCTTGATGGAAATCGAATTTCTTCCTTGCCAGATGAATGTAATTCTCTCCTTTAAGACAATAATATATTATTTGAAAGAGATTTTATTGTCCCTCTTTTATGTACTAACTTACAGTGTATTTTGTTTTTAGTGGGCCAGTTAGTAAGGCTTGAACGCTTATCCATCGCAGGGAATTTGTTAACATCCTTGCCGGCAACTATTGGCAGTTTGAGAAACGTAAGTAAATTATAAATAACAAAACCTAGATATCATCAAACTTTTATATTGCTTATGCAATTTGGATGATTATATGCATAATGCATTATGTGTAGATGTTATCATCACTGCATACTTGTCAGATTTTGAAGAGTTGAGAGCATCATTTTAAGCCAAGACATTTCAGAAATGAAGCTTTCTCCATGTCATACATTTGAAGACACAACACATCATTATTCAGTATTTGTCACGTCATTTGTGATGTAACCTGTGTTTGTTGTCCATGCTTGTTAGATAATATCCGTTTTCTGTTGACATGCTTACTTTCTAATCGAAGGAATGTTAAAGACACCCTTTTAACACTCAAGATTATTTTATTGTCGTTACTTTTCTTATCTTTAAATATAAACGATGGATGTATATGACATATTGACCTATGACTTGGATTTGCATGAGGCTTGGATCATAATCTTCCATTGTTAGCTGAAATTATGATATGAAATGCCCACCTTTATAACTTTTAAAGTATGATATCTTGTTTGATAATGTAGCTGTTGATTTTAAACGTCTCAAATAACAAGTTACAGTCACTTCCGGAATCTGTTGGGAGTTGCTTCTCTTTGGAAGAATTACAGGCCAATGGTATGTTGATTGATAGTTTGACACGATTTGTTCATTTCTGAATTGCATGAGCATGGTAGTGCATGTCTGTTTTCCCTTACGCTCTTTCGCTGTAAAAATTGGAAATAGTTTGGAGAGATTTTTTTACAAAACTATTGTGTTTATTTAATTTTACTGGATTGTGTTGATTGTCAGTTCAATGCGGAGAATCTGCCTTGCTATATTTATTTCTATTCCAATGGAAGTTTTTGTTTAATGGAAGATATAAATCTGTTGTAGATATAAATTCAAGATTAGATTGCTTTAAGACAAATTTAAACCTGGTTGGCCACCTTTATTGAGGTCTTCCCTCCCAACCACAAGGCTCAAACCCGAGACCTTGCATAAGAAATTCGAGACCTTGCAATGTTGGTTTTAAGACTCTAAGTTTGAGATTACTTTTCAGCTCTTACATCTAATCTCTAAATTGATGCCATGCCGTTTGTATTGTTTTATGCTTTCTAGTTACTTGGTCTAGTTTAATATAATTTACTGAAGAGTCTCAATTTGGTTATAATTTAAGCAAACCACAATATTTTGGGGTGAAGAATTATTACAGTATACCATAAAACCATTTCTCTTGTGATTGGCTATTTCTATGATTGTCAAGTCTGGATATTTAGAACATTTTGCGCCACCTTTATTATTATTTGGCTTCAAACTGATTCTGAATAAGCTAATTTCAGACTTTTTGCAAACATTTCAGATAATCTTATTGAAGATCTTCCTTCGTCAGTTTGCAATCTCTCTCACTTGAAGTCACTTTGCTTAGACAACAATAATGTGAAGCAGGTATTTTGTTTTAATACCTTAGTGATGTAATGCTGGACTTGATTGTTTCATTGTTCTCTTTTATCAATTTTTATTTATTTATTTATTTTGTGAGTGCTTTTTGAATCTCCATCATGCTTTGTTGACCTCTTATGAGGAACGCTTTGTTGACCTTTTATGAGGAACATCCAACTGTAGTGTGAAACCACATATTTGTTTCACCCTTTTTTTTGCTATTGGACTAGTGGCCAACATGCTAAAATAAACACACGTACGGGGAGGGGGATGTGGTGACCCGAGTTCAAGCCCGGGATTCCACATAAAATGTCGTCAGAGCTAAACCACTAGGCTGTAACAACGGGGACATATTTGCTCAAATTGATTCTGTTTTATTATTGGGTTTAGTCTTTAAGTATAGAGAGAGAGGAAAAGGAACATTCAGAATAATAAAATTATATTGATATTAATGTGAATAATATATTACAAAAGATAACACACTGATTCTTATTTATATTTATACTAGATTCTAAATCCTTATTACATTCTCGAAAAAATAATTAAAATATGTGGAAACCAATTCTATGAGATAATATAAGATTTGATTTTCATTAAAGAGTACTGTTGTGGTTAGATATGTTTTTTATATTCTACCTGTCTTCCTCAAAGGAAAAAACATATATGGAATTCACAAATTATGACGGGAATGTCTATTAAAACAAGAGCTTTATAAATACAAGAGCCAAGTTAAATTGCATTTGGGATAATCGGGTAAGAATTGGGACAGACCTTGAGCCTGTTTGGATTTACATATTTCAGCTTATCTATTGGCACAACACTTGTAAGGTTAATTCCATAAACTCCCTAGGATAGCTTATAAAAACAGCTTATAGCTTAAATGAATACAATTTATTTTTATTTTATCTTTTGTTATAGAAATAATTTATACACAAGTACTTACACTGCCGAGGCCATACTGCAAGTTACACAATATTCCGGTCCATACCTCATCGAGGACAAACCCCAGATCCTTTAGGACCCCATTGCCTTTAACTGTCTGAATTCATCTGGTGGAACTGATTGTCACTGTTATATAGTAGTTTGTCTTGTCAAGTTTTCAGCATTTAAACTTTGCAGACTTGAATTTTGTTTACCATTTTTGCTTTTGAAGAATTTGAACTCAATATGTTCTGATCAAAGGATAAACTTTGAAATTACTTGAATTAATGCTTGGAGTTTTCTTTGTCCACCAAATTAACTTCCCTCGATGACTAGCTGCATTTTACAATTAGGTACAATGAATGAAGTGAACCTGTTTTTTTCTTTGCGTTAGGTTTTTCCATACAAAGGGGGATGCGTATATTTTCGTGAAGATAATGTAGCTTGAATATGAGGAATATCAAGTTTTATTCTTTCAACATGCATGAATGGTTATTCGCCACTATCATTTGGAAGAGTTGATTGAATGATGCACCAATTTCTAAATCAATATTTACAATTGTTCTAATGCTTTTTAAGCATGTCTCATGATTTATGAATTTGTCCGTTAAGTTTGAATTGGCGTGCAATAATATTTGTGTTCTTGTCTAGTCTGGGAACCCATCTTAGTTTAATTATTTGTCTGTTTCGCTATTGTGGTTTGCTTTGTTACTAAGTTAGAATGTTGAATATTTGCTATGCACATAGTGTAAATTAGGTGTAGGTACCATGCTTTTAATAAAATTCTGTATTAAGCGAACTCTTAGGATTTTACTGGTCCGATTCTACGAGTTTATGTAATCCTGAATGTCTTAGTGATACCTTGGTTTCCTTTTGGGCAGATACCTATGAATCTATTGAAAGATTGCAAAGCTCTTCAAAACCTATCACTGCATGGTAATCCTATATCAATGGATCAATTTCAACAGGTATGCTCTTGTTTCCGGATTTCTACTCTTCTTTTTCACTTTTCTATGTTTCAATGCAATTAAAGCATTTGTCAATGATCCAGATGGACGGGTTTCAAGAGTTTGAAGCAAGACGGAAAAAGAAATTTGACAAACAAATTGATTCAAACGTAATGATCGGTTCCAAAGGTCTCGATGAGGGTGTCGATCTATGA
Protein sequence

>MS.gene51817.t1

MGCIASKNAETKATRISRWRSTGIVALRDSKLKTFPDEIIDLDRSVRTLDLTHNRIVDIPVEISKLINVQRLILADNLIDRLPVNLGKLQSLKLVNLDGNRISSLPDELGQLVRLERLSIAGNLLTSLPATIGSLRNLLILNVSNNKLQSLPESVGSCFSLEELQANDNLIEDLPSSVCNLSHLKSLCLDNNNVKQIPMNLLKDCKALQNLSLHGNPISMDQFQQMDGFQEFEARRKKKFDKQIDSNVMIGSKGLDEGVDL