AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50870.t1 MTR_3g023830 98.467 261 4 0 1 261 1 261 0.0 512
MS.gene50870.t1 MTR_3g465570 35.628 247 153 4 15 257 148 392 7.68e-47 160
MS.gene50870.t1 MTR_5g024780 41.317 167 97 1 35 201 269 434 5.06e-31 121
MS.gene50870.t1 MTR_5g024780 40.000 160 95 1 59 218 269 427 7.38e-23 97.8
MS.gene50870.t1 MTR_5g024780 31.472 197 109 2 27 198 330 525 1.99e-17 82.0
MS.gene50870.t1 MTR_8g072950 40.268 149 89 0 53 201 275 423 4.83e-26 107
MS.gene50870.t1 MTR_8g072950 38.690 168 102 1 34 201 280 446 1.10e-22 97.1
MS.gene50870.t1 MTR_8g072950 37.324 142 88 1 77 218 276 416 5.78e-20 89.4
MS.gene50870.t1 MTR_8g072950 33.161 193 121 5 32 220 324 512 8.75e-19 85.9
MS.gene50870.t1 MTR_4g098530 33.333 177 117 1 25 201 201 376 5.27e-23 97.8
MS.gene50870.t1 MTR_4g098530 36.420 162 102 1 59 220 188 348 4.27e-22 95.1
MS.gene50870.t1 MTR_4g098530 35.897 156 100 0 46 201 198 353 1.09e-20 91.3
MS.gene50870.t1 MTR_4g098530 31.683 202 112 2 27 203 249 449 2.09e-17 81.6
MS.gene50870.t1 MTR_4g098530 30.357 224 144 5 22 234 213 435 7.80e-17 80.1
MS.gene50870.t1 MTR_2g079560 29.665 209 128 2 37 226 2 210 1.36e-21 94.0
MS.gene50870.t1 MTR_2g079560 28.431 204 121 2 24 203 73 275 2.08e-13 70.1
MS.gene50870.t1 MTR_2g079560 31.100 209 138 5 13 218 354 559 6.97e-11 62.4
MS.gene50870.t1 MTR_2g079560 29.665 209 128 2 37 226 2 210 1.68e-21 94.0
MS.gene50870.t1 MTR_2g079560 28.431 204 121 2 24 203 73 275 2.39e-13 69.7
MS.gene50870.t1 MTR_2g079560 31.100 209 138 5 13 218 352 557 8.15e-11 62.4
MS.gene50870.t1 MTR_4g105010 36.585 164 97 3 70 227 206 368 3.08e-21 92.8
MS.gene50870.t1 MTR_4g105010 28.346 254 129 5 3 204 183 435 2.54e-17 81.6
MS.gene50870.t1 MTR_4g105010 33.333 171 108 3 49 216 208 375 2.54e-16 78.6
MS.gene50870.t1 MTR_2g079560 29.442 197 120 2 49 226 61 257 2.68e-19 87.4
MS.gene50870.t1 MTR_2g079560 28.431 204 121 2 24 203 120 322 2.37e-13 69.7
MS.gene50870.t1 MTR_2g079560 29.707 239 102 7 13 218 399 604 7.86e-11 62.4
MS.gene50870.t1 MTR_5g032910 30.085 236 133 5 31 236 161 394 4.89e-18 83.6
MS.gene50870.t1 MTR_6g036890 32.597 181 115 7 46 219 76 256 2.31e-17 82.0
MS.gene50870.t1 MTR_3g076990 31.928 166 106 3 68 227 201 365 2.97e-16 78.2
MS.gene50870.t1 MTR_3g076990 32.903 155 100 2 44 197 200 351 5.63e-16 77.4
MS.gene50870.t1 MTR_3g076990 34.641 153 96 3 31 180 280 431 4.57e-15 74.7
MS.gene50870.t1 MTR_3g076990 28.205 234 155 6 27 249 253 484 1.41e-14 73.6
MS.gene50870.t1 MTR_5g085700 33.708 178 112 6 45 216 230 407 9.71e-16 77.0
MS.gene50870.t1 MTR_5g085700 31.383 188 99 6 36 194 127 313 7.36e-12 65.5
MS.gene50870.t1 MTR_1g038890 29.961 257 137 11 34 253 237 487 9.99e-16 77.0
MS.gene50870.t1 MTR_7g067530 30.736 231 145 8 25 248 385 607 1.88e-15 76.3
MS.gene50870.t1 MTR_7g081780 32.487 197 124 7 59 247 279 474 7.66e-15 74.3
MS.gene50870.t1 MTR_7g081780 33.129 163 100 8 46 201 481 641 3.31e-11 63.5
MS.gene50870.t1 MTR_1g039220 29.565 230 153 8 32 253 259 487 9.62e-15 74.3
MS.gene50870.t1 MTR_1g039220 33.166 199 101 8 36 203 119 316 7.49e-13 68.6
MS.gene50870.t1 MTR_1g039220 31.771 192 124 7 34 219 213 403 7.35e-12 65.5
MS.gene50870.t1 MTR_1g039220 31.395 172 110 8 34 198 237 407 3.75e-11 63.5
MS.gene50870.t1 MTR_7g051040 31.163 215 114 9 36 219 124 335 1.46e-14 73.6
MS.gene50870.t1 MTR_2g070020 34.518 197 96 8 34 198 474 669 1.56e-14 73.6
MS.gene50870.t1 MTR_4g127120 36.257 171 106 3 24 192 30 199 2.13e-14 72.4
MS.gene50870.t1 MTR_4g127120 34.667 150 94 3 32 178 108 256 6.06e-14 70.9
MS.gene50870.t1 MTR_4g127120 31.313 198 110 3 27 198 56 253 6.18e-14 70.9
MS.gene50870.t1 MTR_4g127120 31.098 164 111 2 40 201 22 185 5.00e-13 68.2
MS.gene50870.t1 MTR_2g038380 30.522 249 139 7 1 218 20 265 2.30e-14 72.4
MS.gene50870.t1 MTR_2g038380 31.461 178 118 3 24 198 93 269 5.34e-13 68.2
MS.gene50870.t1 MTR_2g038380 33.333 138 89 2 44 178 135 272 1.48e-11 63.9
MS.gene50870.t1 MTR_5g096530 32.536 209 125 10 36 230 144 350 2.37e-14 72.8
MS.gene50870.t1 MTR_5g096530 34.756 164 100 7 59 216 264 426 2.18e-12 67.0
MS.gene50870.t1 MTR_5g096530 31.138 167 110 5 58 219 215 381 1.79e-11 64.3
MS.gene50870.t1 MTR_3g092390 33.696 184 112 8 59 236 173 352 6.67e-14 71.6
MS.gene50870.t1 MTR_8g062130 33.333 195 103 5 30 198 729 922 7.63e-14 71.6
MS.gene50870.t1 MTR_8g062130 31.677 161 107 3 29 187 845 1004 3.50e-11 63.5
MS.gene50870.t1 MTR_7g091680 29.798 198 130 7 44 232 134 331 1.02e-13 71.2
MS.gene50870.t1 MTR_1g039310 30.841 214 139 7 25 232 346 556 1.03e-13 71.2
MS.gene50870.t1 MTR_5g087350 33.862 189 116 9 38 219 90 276 1.22e-13 70.9
MS.gene50870.t1 MTR_7g045710 33.508 191 96 8 59 219 295 484 1.46e-13 70.9
MS.gene50870.t1 MTR_5g025950 33.333 180 113 7 44 216 428 607 1.53e-13 70.5
MS.gene50870.t1 MTR_8g062140 29.952 207 115 6 56 233 666 871 2.08e-13 70.1
MS.gene50870.t1 MTR_8g062140 30.165 242 108 7 30 211 688 928 1.10e-12 68.2
MS.gene50870.t1 MTR_8g062140 31.915 188 99 5 32 192 784 969 2.21e-11 64.3
MS.gene50870.t1 MTR_7g045860 33.508 191 96 8 59 219 286 475 2.22e-13 70.1
MS.gene50870.t1 MTR_7g045510 35.938 192 111 11 38 219 248 437 2.84e-13 69.7
MS.gene50870.t1 MTR_7g045510 31.718 227 144 9 36 253 321 545 9.26e-13 68.2
MS.gene50870.t1 MTR_7g045510 31.776 214 136 10 14 219 370 581 7.33e-12 65.5
MS.gene50870.t1 MTR_7g059285 37.222 180 105 8 49 221 342 520 2.93e-13 69.7
MS.gene50870.t1 MTR_7g059285 33.702 181 111 8 34 206 111 290 1.35e-12 67.8
MS.gene50870.t1 MTR_8g089200 29.302 215 120 7 36 219 379 592 3.21e-13 69.7
MS.gene50870.t1 MTR_5g045910 32.990 194 120 9 34 219 140 331 3.32e-13 69.7
MS.gene50870.t1 MTR_2g016530 33.333 189 114 8 35 216 323 506 3.44e-13 69.7
MS.gene50870.t1 MTR_7g081410 29.082 196 132 6 59 247 157 352 4.41e-13 69.3
MS.gene50870.t1 MTR_7g081480 33.735 166 101 7 34 191 106 270 4.78e-13 69.3
MS.gene50870.t1 MTR_7g081480 27.854 219 142 7 59 261 277 495 6.51e-11 62.8
MS.gene50870.t1 MTR_7g081410 29.082 196 132 6 59 247 277 472 4.96e-13 68.9
MS.gene50870.t1 MTR_2g079560 29.412 170 118 2 35 203 82 250 5.53e-13 68.6
MS.gene50870.t1 MTR_2g079560 31.148 122 79 1 110 226 64 185 3.75e-11 63.2
MS.gene50870.t1 MTR_2g079560 31.100 209 138 5 13 218 329 534 7.24e-11 62.4
MS.gene50870.t1 MTR_7g010000 35.625 160 96 7 49 201 164 323 5.88e-13 68.9
MS.gene50870.t1 MTR_8g041100 37.692 130 76 5 45 169 230 359 6.07e-13 68.9
MS.gene50870.t1 MTR_4g105520 32.161 199 126 7 34 223 375 573 6.10e-13 68.9
MS.gene50870.t1 MTR_7g081570 33.333 171 103 8 59 221 273 440 6.19e-13 68.9
MS.gene50870.t1 MTR_7g081570 33.133 166 102 7 34 191 102 266 4.21e-11 63.2
MS.gene50870.t1 MTR_8g076410 40.299 134 75 5 59 187 128 261 6.29e-13 68.2
MS.gene50870.t1 MTR_1g047670 35.928 167 100 7 34 194 143 308 7.46e-13 68.6
MS.gene50870.t1 MTR_1g047670 31.795 195 123 7 24 212 181 371 4.83e-12 66.2
MS.gene50870.t1 MTR_1g047670 37.671 146 87 4 77 218 91 236 1.44e-11 64.7
MS.gene50870.t1 MTR_7g446190 29.091 220 125 6 59 247 228 447 8.60e-13 68.2
MS.gene50870.t1 MTR_7g446190 30.928 194 125 7 66 251 187 379 8.85e-11 62.4
MS.gene50870.t1 MTR_5g087360 31.548 168 108 7 58 219 109 275 1.09e-12 68.2
MS.gene50870.t1 MTR_3g069210 27.700 213 144 4 20 223 553 764 1.09e-12 68.2
MS.gene50870.t1 MTR_8g041150 36.923 130 77 5 45 169 177 306 1.19e-12 67.8
MS.gene50870.t1 MTR_5g087360 31.548 168 108 7 58 219 109 275 1.25e-12 67.8
MS.gene50870.t1 MTR_2g019170 27.039 233 138 8 1 201 117 349 1.39e-12 67.4
MS.gene50870.t1 MTR_3g092420 33.152 184 113 8 59 236 131 310 1.47e-12 67.8
MS.gene50870.t1 MTR_1g102500 30.319 188 99 8 45 201 254 440 1.59e-12 67.4
MS.gene50870.t1 MTR_1g102500 28.696 230 130 10 22 219 326 553 2.84e-12 66.6
MS.gene50870.t1 MTR_2g029010 33.146 178 105 9 36 203 120 293 1.73e-12 67.4
MS.gene50870.t1 MTR_1g040615 27.917 240 141 7 46 253 1305 1544 1.75e-12 67.4
MS.gene50870.t1 MTR_8g076378 39.552 134 76 5 59 187 128 261 2.02e-12 66.6
MS.gene50870.t1 MTR_8g461110 30.000 190 126 7 36 219 113 301 2.03e-12 67.0
MS.gene50870.t1 MTR_5g069580 31.818 198 118 9 46 227 111 307 2.14e-12 67.0
MS.gene50870.t1 MTR_8g066700 32.597 181 115 7 46 219 104 284 2.15e-12 67.0
MS.gene50870.t1 MTR_8g461110 30.000 190 126 7 36 219 113 301 2.65e-12 67.0
MS.gene50870.t1 MTR_1g039090 28.947 228 153 8 34 253 136 362 2.81e-12 66.6
MS.gene50870.t1 MTR_7g081720 31.795 195 123 8 34 219 118 311 2.88e-12 66.6
MS.gene50870.t1 MTR_5g019070 34.066 182 112 8 46 219 98 279 3.19e-12 66.6
MS.gene50870.t1 MTR_5g019070 28.302 212 121 6 36 216 360 571 5.17e-11 63.2
MS.gene50870.t1 MTR_1g080440 30.808 198 128 7 59 248 260 456 3.63e-12 66.6
MS.gene50870.t1 MTR_1g088930 31.492 181 117 7 46 219 103 283 3.66e-12 66.6
MS.gene50870.t1 MTR_5g026160 27.434 226 153 8 24 238 334 559 3.97e-12 66.2
MS.gene50870.t1 MTR_4g094790 33.117 154 97 6 45 192 419 572 4.02e-12 66.2
MS.gene50870.t1 MTR_7g039330 28.311 219 151 6 15 227 467 685 4.18e-12 66.2
MS.gene50870.t1 MTR_4g130390 31.579 190 122 7 34 216 321 509 4.30e-12 66.2
MS.gene50870.t1 MTR_1g029940 34.392 189 115 9 36 216 290 477 4.45e-12 66.2
MS.gene50870.t1 MTR_8g445800 30.526 190 125 7 36 219 113 301 5.91e-12 65.9
MS.gene50870.t1 MTR_5g087370 34.731 167 102 7 59 219 110 275 5.91e-12 65.9
MS.gene50870.t1 MTR_1g039240 28.241 216 124 7 34 219 335 549 6.48e-12 65.9
MS.gene50870.t1 MTR_3g113140 35.829 187 110 9 38 216 486 670 6.97e-12 65.9
MS.gene50870.t1 MTR_3g113140 32.787 183 96 6 35 213 339 498 1.41e-11 64.7
MS.gene50870.t1 MTR_3g032340 32.927 164 101 6 79 237 593 752 7.24e-12 65.5
MS.gene50870.t1 MTR_6g036790 29.101 189 125 8 36 216 347 534 7.52e-12 65.5
MS.gene50870.t1 MTR_6g036790 30.645 186 97 6 46 221 110 273 3.84e-11 63.5
MS.gene50870.t1 MTR_1g040545 27.354 223 150 8 39 253 144 362 8.98e-12 65.5
MS.gene50870.t1 MTR_6g088785 33.533 167 103 7 35 194 113 278 9.78e-12 65.1
MS.gene50870.t1 MTR_5g087340 32.143 168 107 7 58 219 110 276 1.13e-11 65.1
MS.gene50870.t1 MTR_6g088785 33.533 167 103 7 35 194 113 278 1.18e-11 65.1
MS.gene50870.t1 MTR_5g082270 32.450 151 95 6 58 201 117 267 1.31e-11 64.7
MS.gene50870.t1 MTR_1g029930 28.169 213 130 9 36 227 116 326 1.36e-11 64.7
MS.gene50870.t1 MTR_1g069470 30.769 208 132 10 36 233 229 434 1.37e-11 64.7
MS.gene50870.t1 MTR_5g014700 32.039 206 131 8 19 216 186 390 1.64e-11 64.7
MS.gene50870.t1 MTR_8g028800 43.119 109 60 2 79 185 715 823 2.07e-11 64.3
MS.gene50870.t1 MTR_6g088790 31.214 173 109 8 35 198 115 286 2.56e-11 63.9
MS.gene50870.t1 MTR_2g072620 30.964 197 113 7 40 216 100 293 2.57e-11 63.9
MS.gene50870.t1 MTR_3g060880 29.167 216 145 8 11 219 316 530 2.96e-11 63.9
MS.gene50870.t1 MTR_2g449790 28.947 190 128 7 36 219 108 296 2.98e-11 63.9
MS.gene50870.t1 MTR_3g070220 27.397 219 122 7 34 216 259 476 3.06e-11 63.5
MS.gene50870.t1 MTR_7g022160 33.871 186 109 10 34 211 388 567 3.35e-11 63.5
MS.gene50870.t1 MTR_5g047390 32.240 183 109 6 44 211 113 295 3.65e-11 63.5
MS.gene50870.t1 MTR_8g041190 36.923 130 77 5 45 169 180 309 3.82e-11 63.5
MS.gene50870.t1 MTR_8g040925 36.923 130 77 5 45 169 180 309 3.82e-11 63.5
MS.gene50870.t1 MTR_6g036840 29.630 189 124 8 36 216 372 559 3.86e-11 63.5
MS.gene50870.t1 MTR_4g028090 29.858 211 137 10 16 218 261 468 3.93e-11 63.5
MS.gene50870.t1 MTR_1g015530 33.714 175 107 9 49 216 217 389 4.27e-11 63.2
MS.gene50870.t1 MTR_1g015530 32.990 194 120 10 13 198 85 276 6.36e-11 62.8
MS.gene50870.t1 MTR_5g095420 30.516 213 132 10 36 241 447 650 4.54e-11 63.2
MS.gene50870.t1 MTR_1g015530 33.714 175 107 9 49 216 188 360 4.61e-11 63.2
MS.gene50870.t1 MTR_1g015530 32.990 194 120 10 13 198 56 247 6.62e-11 62.8
MS.gene50870.t1 MTR_2g072610 29.048 210 111 9 57 229 263 471 4.97e-11 63.2
MS.gene50870.t1 MTR_4g036695 29.075 227 146 12 34 247 141 365 5.03e-11 63.2
MS.gene50870.t1 MTR_5g014720 33.803 142 87 4 58 192 180 321 5.07e-11 63.2
MS.gene50870.t1 MTR_4g037720 31.034 174 105 8 64 231 182 346 5.69e-11 62.8
MS.gene50870.t1 MTR_6g036870 28.358 201 135 8 24 216 323 522 5.94e-11 62.8
MS.gene50870.t1 MTR_2g450870 31.937 191 123 7 34 218 337 526 6.87e-11 62.8
MS.gene50870.t1 MTR_5g082920 30.189 212 132 10 34 231 285 494 7.61e-11 62.4
MS.gene50870.t1 MTR_3g093930 31.319 182 116 8 44 218 402 581 7.80e-11 62.4
MS.gene50870.t1 MTR_3g110840 31.720 186 116 8 44 219 141 325 8.12e-11 62.4
MS.gene50870.t1 MTR_1g088935 34.146 164 93 10 59 209 133 294 8.80e-11 62.4
MS.gene50870.t1 MTR_5g026000 27.778 216 144 9 36 240 360 574 8.91e-11 62.4
MS.gene50870.t1 MTR_1g100787 31.633 196 124 9 36 223 254 447 9.35e-11 62.4
MS.gene50870.t1 MTR_7g078340 29.032 217 138 10 14 215 84 299 9.36e-11 62.4
MS.gene50870.t1 MTR_8g445800 32.877 146 94 4 78 219 11 156 9.80e-11 62.0
MS.gene50870.t1 MTR_7g074010 37.255 153 86 7 73 215 108 260 9.95e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50870.t1 AT5G07910 75.479 261 63 1 1 260 1 261 2.19e-129 367
MS.gene50870.t1 AT2G30105 37.349 249 152 2 15 260 124 371 1.27e-52 175
MS.gene50870.t1 AT2G17440 40.351 171 101 1 31 201 218 387 2.85e-27 110
MS.gene50870.t1 AT2G17440 32.203 177 117 2 27 201 306 481 1.12e-16 79.7
MS.gene50870.t1 AT2G17440 32.667 150 77 3 90 216 207 355 1.58e-11 64.3
MS.gene50870.t1 AT4G35470 38.926 149 91 0 53 201 255 403 5.83e-24 100
MS.gene50870.t1 AT4G35470 28.571 217 129 3 45 235 270 486 8.61e-17 80.1
MS.gene50870.t1 AT4G35470 29.000 200 116 2 27 201 299 497 6.53e-14 71.6
MS.gene50870.t1 AT4G35470 38.926 149 91 0 53 201 255 403 6.15e-24 100
MS.gene50870.t1 AT4G35470 28.571 217 129 3 45 235 270 486 7.07e-17 80.1
MS.gene50870.t1 AT4G35470 29.000 200 116 2 27 201 299 497 7.11e-14 71.2
MS.gene50870.t1 AT3G15410 30.851 188 117 1 37 211 2 189 1.52e-20 90.9
MS.gene50870.t1 AT3G15410 29.412 204 119 2 24 203 72 274 2.17e-18 84.7
MS.gene50870.t1 AT3G26500 30.952 210 133 4 29 227 117 325 2.06e-19 87.4
MS.gene50870.t1 AT3G26500 31.401 207 135 5 19 220 180 384 4.86e-19 86.3
MS.gene50870.t1 AT3G15410 29.897 194 117 2 37 211 2 195 1.61e-18 85.1
MS.gene50870.t1 AT3G15410 29.412 204 119 2 24 203 78 280 1.84e-18 85.1
MS.gene50870.t1 AT1G12970 36.364 165 98 3 69 227 163 326 1.92e-18 84.7
MS.gene50870.t1 AT1G12970 32.258 155 104 1 46 199 163 317 4.28e-15 74.7
MS.gene50870.t1 AT1G12970 31.579 209 114 5 22 202 184 391 1.19e-14 73.6
MS.gene50870.t1 AT1G12970 32.099 162 106 3 24 182 234 394 4.69e-13 68.9
MS.gene50870.t1 AT3G11330 35.570 149 94 2 69 216 200 347 3.91e-17 80.9
MS.gene50870.t1 AT3G11330 29.952 207 118 4 24 204 225 430 2.02e-14 72.8
MS.gene50870.t1 AT3G11330 31.169 154 105 1 46 198 200 353 3.91e-13 69.3
MS.gene50870.t1 AT3G11330 27.528 178 102 3 4 155 251 427 1.71e-11 64.3
MS.gene50870.t1 AT4G26050 31.120 241 138 6 45 259 81 319 5.67e-17 80.1
MS.gene50870.t1 AT4G26050 31.902 163 109 2 41 201 54 216 1.33e-13 70.1
MS.gene50870.t1 AT5G05850 35.294 153 87 3 75 216 202 353 3.27e-16 78.2
MS.gene50870.t1 AT5G05850 29.825 228 110 4 25 203 209 435 6.37e-15 74.3
MS.gene50870.t1 AT5G05850 34.677 124 81 0 95 218 209 332 8.96e-13 68.2
MS.gene50870.t1 AT5G17680 33.333 198 102 7 30 201 707 900 6.21e-16 77.8
MS.gene50870.t1 AT5G17680 28.774 212 129 7 21 211 808 1018 2.45e-12 67.0
MS.gene50870.t1 AT5G17680 33.333 198 102 7 30 201 706 899 6.51e-16 77.8
MS.gene50870.t1 AT5G17680 28.774 212 129 7 21 211 807 1017 2.44e-12 67.0
MS.gene50870.t1 AT3G47570 33.333 192 122 6 36 221 353 544 4.49e-15 75.1
MS.gene50870.t1 AT1G71400 36.111 180 101 9 64 229 104 283 4.76e-14 72.0
MS.gene50870.t1 AT5G46330 32.683 205 106 8 46 219 98 301 5.87e-14 72.0
MS.gene50870.t1 AT5G46330 35.429 175 105 8 49 216 221 394 6.09e-14 72.0
MS.gene50870.t1 AT5G46330 32.683 205 106 8 46 219 98 301 5.87e-14 72.0
MS.gene50870.t1 AT5G46330 35.429 175 105 8 49 216 221 394 6.09e-14 72.0
MS.gene50870.t1 AT3G56370 33.854 192 102 9 36 203 304 494 6.94e-14 71.6
MS.gene50870.t1 AT5G51350 32.039 206 129 8 35 230 117 321 8.77e-14 71.2
MS.gene50870.t1 AT4G04220 35.556 180 108 7 45 216 131 310 9.05e-14 71.2
MS.gene50870.t1 AT4G20140 31.461 178 116 6 45 216 120 297 1.11e-13 71.2
MS.gene50870.t1 AT5G63930 34.043 188 115 9 36 216 114 299 1.22e-13 70.9
MS.gene50870.t1 AT5G63930 35.882 170 104 5 52 216 442 611 5.74e-13 68.9
MS.gene50870.t1 AT5G63930 31.707 164 105 7 28 185 466 628 8.73e-11 62.4
MS.gene50870.t1 AT5G63930 34.043 188 115 9 36 216 50 235 1.37e-13 70.9
MS.gene50870.t1 AT5G63930 35.882 170 104 5 52 216 378 547 6.53e-13 68.9
MS.gene50870.t1 AT5G63930 31.707 164 105 7 28 185 402 564 9.55e-11 62.4
MS.gene50870.t1 AT1G27180 29.714 175 119 4 27 198 854 1027 1.47e-13 70.9
MS.gene50870.t1 AT1G27180 28.205 195 126 5 30 211 763 956 1.36e-11 64.7
MS.gene50870.t1 AT4G29880 35.673 171 107 3 24 192 57 226 1.86e-13 69.7
MS.gene50870.t1 AT4G29880 40.367 109 63 2 95 201 81 189 4.82e-13 68.6
MS.gene50870.t1 AT1G27180 29.714 175 119 4 27 198 1016 1189 1.89e-13 70.5
MS.gene50870.t1 AT1G27180 28.205 195 126 5 30 211 925 1118 1.69e-11 64.7
MS.gene50870.t1 AT1G27180 29.714 175 119 4 27 198 854 1027 1.93e-13 70.5
MS.gene50870.t1 AT1G27180 28.205 195 126 5 30 211 763 956 1.90e-11 64.3
MS.gene50870.t1 AT1G27180 29.714 175 119 4 27 198 852 1025 2.01e-13 70.5
MS.gene50870.t1 AT1G27180 28.205 195 126 5 30 211 761 954 1.86e-11 64.3
MS.gene50870.t1 AT1G27180 29.714 175 119 4 27 198 852 1025 2.01e-13 70.5
MS.gene50870.t1 AT1G27180 28.205 195 126 5 30 211 761 954 1.86e-11 64.3
MS.gene50870.t1 AT1G27180 29.714 175 119 4 27 198 678 851 2.06e-13 70.5
MS.gene50870.t1 AT1G27180 28.205 195 126 5 30 211 587 780 1.76e-11 64.7
MS.gene50870.t1 AT1G27180 29.714 175 119 4 27 198 678 851 2.06e-13 70.5
MS.gene50870.t1 AT1G27180 28.205 195 126 5 30 211 587 780 1.76e-11 64.7
MS.gene50870.t1 AT1G27180 29.714 175 119 4 27 198 678 851 2.06e-13 70.5
MS.gene50870.t1 AT1G27180 28.205 195 126 5 30 211 587 780 1.76e-11 64.7
MS.gene50870.t1 AT1G08590 32.524 206 107 8 45 219 222 426 2.90e-13 69.7
MS.gene50870.t1 AT1G73066 35.393 178 105 9 34 203 208 383 2.91e-13 69.7
MS.gene50870.t1 AT3G24240 35.119 168 101 7 34 194 120 286 3.13e-13 69.7
MS.gene50870.t1 AT4G08850 25.954 262 140 7 14 221 184 445 3.75e-13 69.3
MS.gene50870.t1 AT4G08850 32.961 179 102 8 28 189 140 317 4.46e-11 63.2
MS.gene50870.t1 AT4G08850 25.954 262 140 7 14 221 184 445 5.13e-13 68.9
MS.gene50870.t1 AT4G08850 32.961 179 102 8 28 189 140 317 6.43e-11 62.8
MS.gene50870.t1 AT2G19330 29.741 232 132 7 24 227 64 292 5.38e-13 68.6
MS.gene50870.t1 AT5G06940 31.414 191 122 8 37 219 93 282 5.46e-13 68.9
MS.gene50870.t1 AT5G06940 30.180 222 97 10 34 198 138 358 1.83e-11 64.3
MS.gene50870.t1 AT3G47090 32.447 188 119 8 36 216 354 540 9.07e-13 68.2
MS.gene50870.t1 AT5G20480 29.891 184 119 6 46 224 419 597 9.55e-13 68.2
MS.gene50870.t1 AT5G20480 29.412 187 126 6 36 216 361 547 4.30e-12 66.2
MS.gene50870.t1 AT5G20480 29.891 184 119 6 46 224 419 597 9.55e-13 68.2
MS.gene50870.t1 AT5G20480 29.412 187 126 6 36 216 361 547 4.30e-12 66.2
MS.gene50870.t1 AT3G25670 36.913 149 90 4 77 221 150 298 1.37e-12 67.4
MS.gene50870.t1 AT5G25930 33.951 162 96 8 49 201 287 446 1.40e-12 67.8
MS.gene50870.t1 AT4G26540 31.100 209 131 10 36 233 134 340 1.51e-12 67.8
MS.gene50870.t1 AT4G26540 30.769 182 120 5 59 234 109 290 7.17e-12 65.9
MS.gene50870.t1 AT1G17230 31.841 201 128 9 27 219 458 657 1.51e-12 67.8
MS.gene50870.t1 AT1G17230 31.841 201 128 9 27 219 458 657 1.63e-12 67.4
MS.gene50870.t1 AT1G17230 31.841 201 128 9 27 219 458 657 1.65e-12 67.8
MS.gene50870.t1 AT1G29730 32.258 186 113 9 44 218 122 305 2.12e-12 67.4
MS.gene50870.t1 AT5G56040 34.694 196 115 7 44 226 96 291 4.00e-12 66.6
MS.gene50870.t1 AT5G48940 35.088 171 101 7 48 211 134 301 4.02e-12 66.6
MS.gene50870.t1 AT5G48940 34.555 191 116 9 36 219 412 600 7.85e-11 62.8
MS.gene50870.t1 AT5G56040 34.694 196 115 7 44 226 96 291 5.48e-12 65.9
MS.gene50870.t1 AT5G62230 30.168 179 96 5 25 174 267 445 7.18e-12 65.5
MS.gene50870.t1 AT1G09970 30.108 186 124 6 36 216 212 396 1.44e-11 64.7
MS.gene50870.t1 AT5G01890 28.641 206 124 9 39 221 380 585 1.63e-11 64.7
MS.gene50870.t1 AT2G26330 32.195 205 124 10 25 219 97 296 1.66e-11 64.7
MS.gene50870.t1 AT1G09970 30.108 186 124 6 36 216 212 396 1.74e-11 64.7
MS.gene50870.t1 AT5G62230 34.416 154 94 7 27 174 341 493 1.89e-11 64.3
MS.gene50870.t1 AT1G68780 28.682 258 123 10 37 236 140 394 1.95e-11 63.9
MS.gene50870.t1 AT1G28440 33.158 190 119 8 36 219 222 409 2.02e-11 64.3
MS.gene50870.t1 AT1G73080 32.673 202 122 9 38 226 213 413 2.05e-11 64.3
MS.gene50870.t1 AT1G27170 28.856 201 130 7 56 248 706 901 2.98e-11 63.9
MS.gene50870.t1 AT5G44700 29.289 239 138 12 28 255 633 851 3.17e-11 63.9
MS.gene50870.t1 AT1G27170 28.856 201 130 7 56 248 706 901 3.66e-11 63.5
MS.gene50870.t1 AT1G29730 33.333 147 92 6 44 184 122 268 3.84e-11 63.5
MS.gene50870.t1 AT1G69550 34.171 199 111 12 30 212 1039 1233 4.13e-11 63.5
MS.gene50870.t1 AT1G29730 33.333 147 92 6 44 184 122 268 4.66e-11 63.2
MS.gene50870.t1 AT3G11010 31.111 180 118 6 46 219 147 326 4.70e-11 63.2
MS.gene50870.t1 AT3G11010 31.111 180 118 6 46 219 84 263 4.72e-11 63.2
MS.gene50870.t1 AT2G41820 28.713 202 135 7 44 236 86 287 4.80e-11 63.2
MS.gene50870.t1 AT1G29730 33.333 147 92 6 44 184 122 268 5.03e-11 63.2
MS.gene50870.t1 AT1G35710 30.172 232 128 9 49 247 323 553 5.07e-11 63.2
MS.gene50870.t1 AT3G19320 30.539 167 111 5 35 197 240 405 5.89e-11 62.8
MS.gene50870.t1 AT1G31420 34.507 142 87 5 44 179 74 215 8.83e-11 62.4
MS.gene50870.t1 AT1G31420 34.507 142 87 5 44 179 74 215 8.83e-11 62.4
MS.gene50870.t1 AT1G31420 34.507 142 87 5 44 179 74 215 9.07e-11 62.0
MS.gene50870.t1 AT3G28040 31.818 198 121 9 48 233 201 396 9.26e-11 62.4

Find 57 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTTTGGAAGAATTAC+AGG 0.201858 3.1:-14354942 MS.gene50870:CDS
GTTAGTTGATACCTTCAATT+TGG 0.236448 3.1:+14357694 None:intergenic
TGTTGGGAGTTGCTTCTCTT+TGG 0.313743 3.1:-14354954 MS.gene50870:CDS
TGAAATTGATCCATTGATAT+AGG 0.320339 3.1:+14352238 None:intergenic
CAATCTTTCAATAGATTCAT+AGG 0.326451 3.1:+14352295 None:intergenic
CTTAAACTCGTGAACCTTGA+TGG 0.335070 3.1:-14355765 MS.gene50870:CDS
CGATAGACTTCCAGTGAACT+TGG 0.355462 3.1:-14355802 MS.gene50870:CDS
GGTTCACGAGTTTAAGAGAT+TGG 0.365330 3.1:+14355772 None:intergenic
AAGCAACTCCCAACAGATTC+CGG 0.366189 3.1:+14354962 None:intergenic
GAATTTGTTAACATCCTTGC+CGG 0.366862 3.1:-14355580 MS.gene50870:CDS
CTCAAACTGCCAATAGTTGC+CGG 0.374395 3.1:+14355561 None:intergenic
ACATCCTTGCCGGCAACTAT+TGG 0.386833 3.1:-14355570 MS.gene50870:CDS
TAGGATTACCATGCAGTGAT+AGG 0.397631 3.1:+14352257 None:intergenic
TCTAAATCAATGATTTCATC+TGG 0.404338 3.1:+14356406 None:intergenic
AAGAAATTCGATTTCCATCA+AGG 0.405385 3.1:+14355751 None:intergenic
GCGTGAGATTCTAGTGGCTT+TGG 0.411238 3.1:+14357751 None:intergenic
AGGAGAGAATTACATTCATC+TGG 0.419154 3.1:+14355723 None:intergenic
AGCGTTCAAGCCTTACTAAC+TGG 0.424737 3.1:+14355616 None:intergenic
ATCAATGGATCAATTTCAAC+AGG 0.429193 3.1:-14352233 MS.gene50870:intron
GACACCCTCATCGAGACCTT+TGG 0.441111 3.1:+14352049 None:intergenic
TTTGCGTGATTCCAAATTGA+AGG 0.441568 3.1:-14357705 MS.gene50870:intron
TAACAAGTTACAGTCACTTC+CGG 0.450974 3.1:-14354981 MS.gene50870:CDS
AATCAATTTGCTAATTTCCA+CGG 0.469479 3.1:+14356161 None:intergenic
TGGAGTTTCCCCAAGTTCAC+TGG 0.469928 3.1:+14355792 None:intergenic
GCATGGTAATCCTATATCAA+TGG 0.479080 3.1:-14352248 MS.gene50870:CDS
GACTTAACGCATAATCGAAT+AGG 0.481716 3.1:-14356364 MS.gene50870:intron
AGTCACTTCCGGAATCTGTT+GGG 0.483565 3.1:-14354970 MS.gene50870:CDS
ATCTCACGCTGGCGATCCAC+CGG 0.491881 3.1:-14357737 MS.gene50870:CDS
CTTGAACGCTTATCCATCGC+AGG 0.509815 3.1:-14355603 MS.gene50870:CDS
ATCAATTTGCTAATTTCCAC+GGG 0.510652 3.1:+14356162 None:intergenic
ATTGATTAATGTGCAGCGCC+TGG 0.519495 3.1:-14356145 MS.gene50870:intron
TTGATTTAGACAGATCTGTT+CGG 0.520676 3.1:-14356393 MS.gene50870:CDS
AGACAACAATAATGTGAAGC+AGG 0.526925 3.1:-14354122 MS.gene50870:intron
GATAGACTTCCAGTGAACTT+GGG 0.527043 3.1:-14355801 MS.gene50870:CDS
TGTCAATGATCCAGATGGAC+GGG 0.537840 3.1:-14352142 MS.gene50870:intron
TGTTAACAAATTCCCTGCGA+TGG 0.540710 3.1:+14355590 None:intergenic
ACCAACATCGCAGATATTAG+CGG 0.543007 3.1:-14355835 MS.gene50870:intron
CAGTCACTTCCGGAATCTGT+TGG 0.543142 3.1:-14354971 MS.gene50870:CDS
ATTGATTCAAACATAATGAT+CGG 0.547957 3.1:-14352074 MS.gene50870:CDS
TTCAAGAGTTTGAAGCAAGA+CGG 0.553299 3.1:-14352118 MS.gene50870:CDS
ATCACGCAAAGCAACAATGC+CGG 0.561384 3.1:+14357718 None:intergenic
ACTGCCAATAGTTGCCGGCA+AGG 0.568524 3.1:+14355566 None:intergenic
TTGGAAGAATTACAGGCCAA+TGG 0.576654 3.1:-14354935 MS.gene50870:intron
AACATAATGATCGGTTCCAA+AGG 0.579655 3.1:-14352065 MS.gene50870:CDS
AGAATTACATTCATCTGGCA+AGG 0.582141 3.1:+14355728 None:intergenic
TTGTCAATGATCCAGATGGA+CGG 0.591351 3.1:-14352143 MS.gene50870:intron
ATAGACTTCCAGTGAACTTG+GGG 0.597386 3.1:-14355800 MS.gene50870:CDS
CTTCAAAACCTATCACTGCA+TGG 0.611064 3.1:-14352265 MS.gene50870:CDS
GGTTCCAAAGGTCTCGATGA+GGG 0.626733 3.1:-14352053 MS.gene50870:CDS
GACTGCAGTTGACATTCCCG+TGG 0.628361 3.1:-14356178 MS.gene50870:intron
ACGCAAAGCAACAATGCCGG+TGG 0.644555 3.1:+14357721 None:intergenic
TCGCCAGCGTGAGATTCTAG+TGG 0.650826 3.1:+14357745 None:intergenic
CGGTTCCAAAGGTCTCGATG+AGG 0.660913 3.1:-14352054 MS.gene50870:CDS
TTGAACGCTTATCCATCGCA+GGG 0.664787 3.1:-14355602 MS.gene50870:CDS
GAGAGATTGCAAACTGACGA+AGG 0.679110 3.1:+14354166 None:intergenic
TCACTGGAAGTCTATCGATG+AGG 0.707550 3.1:+14355808 None:intergenic
AAGCCACTAGAATCTCACGC+TGG 0.734758 3.1:-14357748 MS.gene50870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGAATAAATGAAATTTAA+TGG + chr3.1:14353804-14353823 None:intergenic 10.0%
!! ATAATATATTATTGTCTTAA+AGG + chr3.1:14354122-14354141 None:intergenic 10.0%
!! GAAAAAATAATTAAAATATG+TGG - chr3.1:14356254-14356273 MS.gene50870:intron 10.0%
!!! TTGTGTTTTTAAATAAAAAA+AGG - chr3.1:14352371-14352390 MS.gene50870:intron 10.0%
!! ACAAATAATTAAACTAAGAT+GGG + chr3.1:14357305-14357324 None:intergenic 15.0%
!! ATAAATAAAAAAACAACTGA+TGG + chr3.1:14353107-14353126 None:intergenic 15.0%
!! GAATAGAAATAAATATAACA+AGG + chr3.1:14355107-14355126 None:intergenic 15.0%
!! TTATCTTTAAATATAAACGA+TGG - chr3.1:14354659-14354678 MS.gene50870:intron 15.0%
!!! AATTGATTCTGTTTTATTAT+AGG - chr3.1:14356083-14356102 MS.gene50870:intron 15.0%
!!! ATTGATTCTGTTTTATTATA+GGG - chr3.1:14356084-14356103 MS.gene50870:intron 15.0%
!!! GTAAATATTGATTTAGAAAT+TGG + chr3.1:14357180-14357199 None:intergenic 15.0%
!!! TAAAATCACTTTTAAATTTG+TGG + chr3.1:14352754-14352773 None:intergenic 15.0%
!!! TATATTTATTTCTATTCCAA+TGG - chr3.1:14355110-14355129 MS.gene50870:intron 15.0%
!!! TCATACTTTAAAAGTTATAA+AGG + chr3.1:14354778-14354797 None:intergenic 15.0%
!!! TGATTCTAATTATTTGATTT+TGG - chr3.1:14352188-14352207 MS.gene50870:intron 15.0%
!!! TGTTGTTTATTTAATTTTAC+TGG - chr3.1:14355046-14355065 MS.gene50870:intron 15.0%
!!! TTCATGTTTTTTTATTGATT+TGG - chr3.1:14352212-14352231 MS.gene50870:intron 15.0%
!! AAAGCATAAAACAATACAAA+CGG + chr3.1:14355371-14355390 None:intergenic 20.0%
!! AAATAATCTTGAGTGTTAAA+AGG + chr3.1:14354622-14354641 None:intergenic 20.0%
!! AAATTACTTGAATTAATGCT+TGG - chr3.1:14356915-14356934 MS.gene50870:intron 20.0%
!! AAATTCTTCAAAAGCAAAAA+TGG + chr3.1:14356860-14356879 None:intergenic 20.0%
!! AATAACTATGTTACTCTATT+TGG - chr3.1:14352999-14353018 MS.gene50870:intron 20.0%
!! AATAATCTTGAGTGTTAAAA+GGG + chr3.1:14354621-14354640 None:intergenic 20.0%
!! AATGTAAAGTGATTTATGTT+TGG - chr3.1:14352449-14352468 MS.gene50870:intron 20.0%
!! ACACAAAAAAGAAAATGAAA+AGG + chr3.1:14352164-14352183 None:intergenic 20.0%
!! AGTTATTTGAACATCAATTT+AGG + chr3.1:14352986-14353005 None:intergenic 20.0%
!! CTTATATTATCTCATAGAAT+TGG + chr3.1:14356283-14356302 None:intergenic 20.0%
!! GACAAATAATTAAACTAAGA+TGG + chr3.1:14357306-14357325 None:intergenic 20.0%
!! TAATGAATTAGTGTTAGATT+TGG - chr3.1:14352678-14352697 MS.gene50870:intron 20.0%
!! TGTAAAAATTGGAAATAGTT+TGG - chr3.1:14354999-14355018 MS.gene50870:CDS 20.0%
!! TTGAAGCCAAATAATAATAA+AGG + chr3.1:14355570-14355589 None:intergenic 20.0%
!! TTTATATTGCTTATGCAATT+TGG - chr3.1:14354330-14354349 MS.gene50870:intron 20.0%
!!! ACTTTAAAAGTTATAAAGGT+GGG + chr3.1:14354774-14354793 None:intergenic 20.0%
!!! AGTTCGTTAATTAGTTTTTA+TGG - chr3.1:14353208-14353227 MS.gene50870:intron 20.0%
!!! ATAAAAGTTTGATGATATCT+AGG + chr3.1:14354315-14354334 None:intergenic 20.0%
!!! ATTGATTCAAACATAATGAT+CGG - chr3.1:14357748-14357767 MS.gene50870:CDS 20.0%
!!! ATTTTTTCGAGAATGTAATA+AGG + chr3.1:14356242-14356261 None:intergenic 20.0%
!!! GATTGATAAGTTTTACTATA+TGG - chr3.1:14352286-14352305 MS.gene50870:CDS 20.0%
!!! TAACGAACTAACTATTTTTT+GGG + chr3.1:14353197-14353216 None:intergenic 20.0%
!!! TAATCGTATGTTTTGTTTTT+TGG - chr3.1:14352395-14352414 MS.gene50870:intron 20.0%
!!! TACTTTAAAAGTTATAAAGG+TGG + chr3.1:14354775-14354794 None:intergenic 20.0%
!!! TTAACGAACTAACTATTTTT+TGG + chr3.1:14353198-14353217 None:intergenic 20.0%
!!! TTTTTTATTGATTTGGATCA+TGG - chr3.1:14352219-14352238 MS.gene50870:intron 20.0%
! AAGCCAAATAATAATAAAGG+TGG + chr3.1:14355567-14355586 None:intergenic 25.0%
! ACATATTTCAGCTTATCTAT+TGG - chr3.1:14356512-14356531 MS.gene50870:intron 25.0%
! ACTACATTTCATCTTATGTT+TGG - chr3.1:14353748-14353767 MS.gene50870:intron 25.0%
! AGTCCAATAGCAAAAAAAAA+CGG + chr3.1:14355930-14355949 None:intergenic 25.0%
! AGTGTTTAAGAAATAAATGC+TGG + chr3.1:14353731-14353750 None:intergenic 25.0%
! AGTTCAACTCAAATGATAAA+AGG - chr3.1:14352325-14352344 MS.gene50870:intron 25.0%
! ATCATAATTTCAGCTAACAA+TGG + chr3.1:14354743-14354762 None:intergenic 25.0%
! ATGGAATTCACAAATTATGA+CGG - chr3.1:14356385-14356404 MS.gene50870:CDS 25.0%
! ATTACATAAACTCGTAGAAT+CGG + chr3.1:14357464-14357483 None:intergenic 25.0%
! ATTTCTATGATTGTCAAATC+TGG - chr3.1:14355522-14355541 MS.gene50870:intron 25.0%
! CAATCTTTCAATAGATTCAT+AGG + chr3.1:14357530-14357549 None:intergenic 25.0%
! CATTAAACAAAAACTACCAT+TGG + chr3.1:14355129-14355148 None:intergenic 25.0%
! CTCAAAGGAAAAAACATATA+TGG - chr3.1:14356366-14356385 MS.gene50870:CDS 25.0%
! GAACTGAATTAGTGTATATT+TGG + chr3.1:14352647-14352666 None:intergenic 25.0%
! GGTTAGTAAATTCCATTATA+TGG + chr3.1:14352733-14352752 None:intergenic 25.0%
! GTAAGTTAGTACATAAAAGA+GGG + chr3.1:14354164-14354183 None:intergenic 25.0%
! TCTAAATCAATGATTTCATC+TGG + chr3.1:14353419-14353438 None:intergenic 25.0%
! TGAAATATGTAAATCCAAAC+AGG + chr3.1:14356502-14356521 None:intergenic 25.0%
! TGAAATTGATCCATTGATAT+AGG + chr3.1:14357587-14357606 None:intergenic 25.0%
! TGTAAGTTAGTACATAAAAG+AGG + chr3.1:14354165-14354184 None:intergenic 25.0%
! TTTAAGAAATAAATGCTGGA+AGG + chr3.1:14353727-14353746 None:intergenic 25.0%
! TTTATGGAAGAACATATGTT+GGG - chr3.1:14353224-14353243 MS.gene50870:intron 25.0%
!! GATAATGATAACCTTTTAAG+AGG + chr3.1:14353581-14353600 None:intergenic 25.0%
!! TAAATTGCATTTGGGATAAT+CGG - chr3.1:14356452-14356471 MS.gene50870:intron 25.0%
!! TAAGCAAACCACAATATTTT+GGG - chr3.1:14355449-14355468 MS.gene50870:intron 25.0%
!! TTAAGCAAACCACAATATTT+TGG - chr3.1:14355448-14355467 MS.gene50870:intron 25.0%
!! TTTTATGGAAGAACATATGT+TGG - chr3.1:14353223-14353242 MS.gene50870:intron 25.0%
!!! AACGAACTAACTATTTTTTG+GGG + chr3.1:14353196-14353215 None:intergenic 25.0%
!!! AATCAATTTGCTAATTTCCA+CGG + chr3.1:14353664-14353683 None:intergenic 25.0%
!!! ACAGTGTATTTTGTTTTTAG+TGG - chr3.1:14354182-14354201 MS.gene50870:CDS 25.0%
!!! ATCTTTCATTTGTTTTTCCA+TGG - chr3.1:14353873-14353892 MS.gene50870:intron 25.0%
!!! CAATGGTAGTTTTTGTTTAA+TGG - chr3.1:14355127-14355146 MS.gene50870:intron 25.0%
!!! CAGTGTATTTTGTTTTTAGT+GGG - chr3.1:14354183-14354202 MS.gene50870:CDS 25.0%
!!! CATATATGTTTTTTCCTTTG+AGG + chr3.1:14356368-14356387 None:intergenic 25.0%
!!! CTTTAAGACAAATTTAAACC+TGG - chr3.1:14355192-14355211 MS.gene50870:intron 25.0%
!!! TGTTTTTATAAGCTATCCTA+GGG + chr3.1:14356569-14356588 None:intergenic 25.0%
!!! TTTTATGCTTTCTAGTTACT+TGG - chr3.1:14355380-14355399 MS.gene50870:intron 25.0%
!!! TTTTTTGGATGAATTGATTC+TGG - chr3.1:14352410-14352429 MS.gene50870:intron 25.0%
AAAACCATTTCTCTTGTGAT+TGG - chr3.1:14355497-14355516 MS.gene50870:intron 30.0%
AACCAAAACGTATGTACAAA+AGG + chr3.1:14353500-14353519 None:intergenic 30.0%
AAGAAATTCGATTTCCATCA+AGG + chr3.1:14354074-14354093 None:intergenic 30.0%
AAGGAAAATGAAAGATAGCA+AGG + chr3.1:14353381-14353400 None:intergenic 30.0%
ACATAGTGTAAATTAGGTGT+AGG - chr3.1:14357384-14357403 MS.gene50870:intron 30.0%
ACGTTATTAACCATGATTTC+AGG + chr3.1:14352817-14352836 None:intergenic 30.0%
ACTATCAATCAACATACCAT+TGG + chr3.1:14354906-14354925 None:intergenic 30.0%
ACTCAATATGTTCTGATCAA+AGG - chr3.1:14356882-14356901 MS.gene50870:intron 30.0%
AGAATCAAAAGCTCAAATTC+TGG - chr3.1:14352527-14352546 MS.gene50870:intron 30.0%
AGATGAATTCAGACAGTTAA+AGG + chr3.1:14356753-14356772 None:intergenic 30.0%
AGCCAAGTTAAATTGCATTT+GGG - chr3.1:14356444-14356463 MS.gene50870:intron 30.0%
ATAAAACAATACAAACGGCA+TGG + chr3.1:14355366-14355385 None:intergenic 30.0%
ATCAATGGATCAATTTCAAC+AGG - chr3.1:14357589-14357608 MS.gene50870:intron 30.0%
ATCCCAAATGCAATTTAACT+TGG + chr3.1:14356449-14356468 None:intergenic 30.0%
ATTCTTTCAACATGCATGAA+TGG - chr3.1:14357112-14357131 MS.gene50870:intron 30.0%
CAGTACAGCACTAATAAAAA+TGG + chr3.1:14353924-14353943 None:intergenic 30.0%
CTATGCACATAGTGTAAATT+AGG - chr3.1:14357378-14357397 MS.gene50870:intron 30.0%
GAAAAAGAAGAGTAGAAATC+CGG + chr3.1:14357628-14357647 None:intergenic 30.0%
GATAATGTAGCTTGAATATG+AGG - chr3.1:14357076-14357095 MS.gene50870:intron 30.0%
GCAACTAAATAGCCATATAA+TGG - chr3.1:14352718-14352737 MS.gene50870:intron 30.0%
GTCCAATAGCAAAAAAAAAC+GGG + chr3.1:14355929-14355948 None:intergenic 30.0%
TAAAATCTCATGTTCTTACC+AGG + chr3.1:14353698-14353717 None:intergenic 30.0%
TGCTAAAATAAACACACGTA+CGG - chr3.1:14355961-14355980 MS.gene50870:intron 30.0%
TGGAATTCACAAATTATGAC+GGG - chr3.1:14356386-14356405 MS.gene50870:CDS 30.0%
TTACAACTACTTCAGAGTAA+AGG + chr3.1:14353529-14353548 None:intergenic 30.0%
TTATGGAAGAACATATGTTG+GGG - chr3.1:14353225-14353244 MS.gene50870:intron 30.0%
TTATGTAATCCTGAATGTCT+TGG - chr3.1:14357475-14357494 MS.gene50870:intron 30.0%
TTGATTTAGACAGATCTGTT+CGG - chr3.1:14353429-14353448 MS.gene50870:intron 30.0%
TTTAACTGTCTGAATTCATC+TGG - chr3.1:14356752-14356771 MS.gene50870:intron 30.0%
TTTACTGAAGAGTCTCAATT+TGG - chr3.1:14355418-14355437 MS.gene50870:intron 30.0%
TTTGTCCGTTAAGTTTGAAT+TGG - chr3.1:14357242-14357261 MS.gene50870:intron 30.0%
! AAATTGCATTTGGGATAATC+GGG - chr3.1:14356453-14356472 MS.gene50870:intron 30.0%
! AAGCAAACCACAATATTTTG+GGG - chr3.1:14355450-14355469 MS.gene50870:intron 30.0%
! ACTAGCTGCATTTTACAATT+AGG - chr3.1:14356974-14356993 MS.gene50870:intron 30.0%
! AGAATTGATTCTGACATGTT+TGG + chr3.1:14352581-14352600 None:intergenic 30.0%
! ATATTGTGTAACTTGCAGTA+TGG + chr3.1:14356678-14356697 None:intergenic 30.0%
! ATTTGGAATACCTGAAATCA+TGG - chr3.1:14352804-14352823 MS.gene50870:intron 30.0%
! ATTTGGTTTCACTTCTAGAT+GGG + chr3.1:14352630-14352649 None:intergenic 30.0%
! GTTAGGTTTTTCCATACAAA+GGG - chr3.1:14357032-14357051 MS.gene50870:intron 30.0%
! GTTAGTTGATACCTTCAATT+TGG + chr3.1:14352131-14352150 None:intergenic 30.0%
! TATTTGGTTTCACTTCTAGA+TGG + chr3.1:14352631-14352650 None:intergenic 30.0%
! TTAGGTTTTTCCATACAAAG+GGG - chr3.1:14357033-14357052 MS.gene50870:intron 30.0%
! TTCCTTTTGTACATACGTTT+TGG - chr3.1:14353495-14353514 MS.gene50870:intron 30.0%
!! AAGAAGTGTCCAAAAAGTAT+GGG + chr3.1:14353833-14353852 None:intergenic 30.0%
!! ATCAATTTGCTAATTTCCAC+GGG + chr3.1:14353663-14353682 None:intergenic 30.0%
!! ATTGATTTGGATCATGGATA+AGG - chr3.1:14352225-14352244 MS.gene50870:intron 30.0%
!! CAAAATGACAGTTTTGTGAA+AGG - chr3.1:14353129-14353148 MS.gene50870:intron 30.0%
!! CTTTCACAAAACTGTCATTT+TGG + chr3.1:14353131-14353150 None:intergenic 30.0%
!! TAAGAAGTGTCCAAAAAGTA+TGG + chr3.1:14353834-14353853 None:intergenic 30.0%
!! TACTTTTTGGACACTTCTTA+TGG - chr3.1:14353834-14353853 MS.gene50870:intron 30.0%
!! TCACAAGAGAAATGGTTTTA+TGG + chr3.1:14355496-14355515 None:intergenic 30.0%
!! TTCATTAAAGAGTACTGTTG+TGG - chr3.1:14356311-14356330 MS.gene50870:intron 30.0%
!!! ATTCTGAAACCCATACTTTT+TGG - chr3.1:14353821-14353840 MS.gene50870:intron 30.0%
!!! CTGTTTTTATAAGCTATCCT+AGG + chr3.1:14356570-14356589 None:intergenic 30.0%
!!! GTGTGTTTATTTTAGCATGT+TGG + chr3.1:14355958-14355977 None:intergenic 30.0%
!!! TCTGTGTGTGTATTTTTTTG+AGG - chr3.1:14353344-14353363 MS.gene50870:intron 30.0%
!!! TTTTTTTGCTATTGGACTAG+TGG - chr3.1:14355932-14355951 MS.gene50870:intron 30.0%
AAACGGGTGAAACAAATATG+TGG + chr3.1:14355913-14355932 None:intergenic 35.0%
AAGTATAGAGAGAGAGGAAA+AGG - chr3.1:14356117-14356136 MS.gene50870:intron 35.0%
AATTTCTTATGCAAGGTCTC+GGG + chr3.1:14355264-14355283 None:intergenic 35.0%
AGAATTACATTCATCTGGCA+AGG + chr3.1:14354097-14354116 None:intergenic 35.0%
AGACAACAATAATGTGAAGC+AGG - chr3.1:14355700-14355719 MS.gene50870:intron 35.0%
AGGAGAGAATTACATTCATC+TGG + chr3.1:14354102-14354121 None:intergenic 35.0%
AGTTGGATGTTCCTCATAAA+AGG + chr3.1:14355879-14355898 None:intergenic 35.0%
ATACCTTAGTGATGTAATGC+TGG - chr3.1:14355735-14355754 MS.gene50870:intron 35.0%
ATAGCCAATCACAAGAGAAA+TGG + chr3.1:14355504-14355523 None:intergenic 35.0%
ATTCAGACAGTTAAAGGCAA+TGG + chr3.1:14356747-14356766 None:intergenic 35.0%
ATTTCTGAATTGCATGAGCA+TGG - chr3.1:14354942-14354961 MS.gene50870:CDS 35.0%
ATTTGTCTGTTTCGCTATTG+TGG - chr3.1:14357319-14357338 MS.gene50870:intron 35.0%
ATTTGTGTTCTTGTCTAGTC+TGG - chr3.1:14357276-14357295 MS.gene50870:intron 35.0%
CATGCTTACTTTCTAATCGA+AGG - chr3.1:14354582-14354601 MS.gene50870:intron 35.0%
CCTAACGCAAAGAAAAAAAC+AGG + chr3.1:14357018-14357037 None:intergenic 35.0%
CGGATATTATCTAACAAGCA+TGG + chr3.1:14354551-14354570 None:intergenic 35.0%
CTAAAATAAACACACGTACG+GGG - chr3.1:14355963-14355982 MS.gene50870:intron 35.0%
CTGCAAGTTACACAATATTC+CGG - chr3.1:14356680-14356699 MS.gene50870:intron 35.0%
CTTCAAGCACGTATAAATAC+AGG + chr3.1:14353322-14353341 None:intergenic 35.0%
CTTTCTAATCTGCGTGTATT+TGG - chr3.1:14352787-14352806 MS.gene50870:intron 35.0%
GAATTTCTTATGCAAGGTCT+CGG + chr3.1:14355265-14355284 None:intergenic 35.0%
GACTTAACGCATAATCGAAT+AGG - chr3.1:14353458-14353477 MS.gene50870:intron 35.0%
GAGCCAAGTTAAATTGCATT+TGG - chr3.1:14356443-14356462 MS.gene50870:intron 35.0%
GCATGGTAATCCTATATCAA+TGG - chr3.1:14357574-14357593 MS.gene50870:intron 35.0%
GCGCCACCTTTATTATTATT+TGG - chr3.1:14355561-14355580 MS.gene50870:CDS 35.0%
GCTAAAATAAACACACGTAC+GGG - chr3.1:14355962-14355981 MS.gene50870:intron 35.0%
GGGAATGTTAGTTCGTTAAA+TGG - chr3.1:14353246-14353265 MS.gene50870:intron 35.0%
GTAAGCATGTCAACAGAAAA+CGG + chr3.1:14354571-14354590 None:intergenic 35.0%
GTCTTAAAACCAACATTGCA+AGG + chr3.1:14355292-14355311 None:intergenic 35.0%
GTCTTTAAGTATAGAGAGAG+AGG - chr3.1:14356111-14356130 MS.gene50870:intron 35.0%
GTGTCTTCAAATGTATGACA+TGG + chr3.1:14354471-14354490 None:intergenic 35.0%
GTTAATTCCATAAACTCCCT+AGG - chr3.1:14356550-14356569 MS.gene50870:intron 35.0%
GTTTAGCTACTCTTTGATTC+TGG - chr3.1:14353773-14353792 MS.gene50870:intron 35.0%
TAACAAGTTACAGTCACTTC+CGG - chr3.1:14354841-14354860 MS.gene50870:intron 35.0%
TATGGAAGAACATATGTTGG+GGG - chr3.1:14353226-14353245 MS.gene50870:intron 35.0%
TCAACTCTTCCAAATGATAG+TGG + chr3.1:14357145-14357164 None:intergenic 35.0%
TCTGTATTAAGCGAACTCTT+AGG - chr3.1:14357427-14357446 MS.gene50870:intron 35.0%
TCTTTCATCTTTGTACCTTG+AGG - chr3.1:14353270-14353289 MS.gene50870:intron 35.0%
TGACATATTGACCTATGACT+TGG - chr3.1:14354689-14354708 MS.gene50870:intron 35.0%
TTCAGACAGTTAAAGGCAAT+GGG + chr3.1:14356746-14356765 None:intergenic 35.0%
TTCTTCACCCCAAAATATTG+TGG + chr3.1:14355460-14355479 None:intergenic 35.0%
TTTGCGTGATTCCAAATTGA+AGG - chr3.1:14352117-14352136 MS.gene50870:CDS 35.0%
TTTGTGTTCTTGTCTAGTCT+GGG - chr3.1:14357277-14357296 MS.gene50870:intron 35.0%
! AACATAATGATCGGTTCCAA+AGG - chr3.1:14357757-14357776 MS.gene50870:CDS 35.0%
! ACACCCCTTAGAATCAATTT+TGG - chr3.1:14352601-14352620 MS.gene50870:intron 35.0%
! CCACCAAAATTGATTCTAAG+GGG + chr3.1:14352607-14352626 None:intergenic 35.0%
! CGTTAGGTTTTTCCATACAA+AGG - chr3.1:14357031-14357050 MS.gene50870:intron 35.0%
! CTTCTCTTTGGAAGAATTAC+AGG - chr3.1:14354880-14354899 MS.gene50870:intron 35.0%
! GCCACCAAAATTGATTCTAA+GGG + chr3.1:14352608-14352627 None:intergenic 35.0%
! GTTTTTCCATGGTAGAATGT+TGG - chr3.1:14353884-14353903 MS.gene50870:intron 35.0%
! TGATACCTTGGTTTCCTTTT+GGG - chr3.1:14357498-14357517 MS.gene50870:intron 35.0%
! TGTTGATTGTCAGTTCAATG+CGG - chr3.1:14355073-14355092 MS.gene50870:intron 35.0%
! TTCAAGAGTTTGAAGCAAGA+CGG - chr3.1:14357704-14357723 MS.gene50870:intron 35.0%
! TTCCAATTAAAAGAGAGCAC+AGG + chr3.1:14353159-14353178 None:intergenic 35.0%
!! CTGGAAAAGTCTGTTTTTCA+AGG + chr3.1:14353400-14353419 None:intergenic 35.0%
!! GAAGTGCTTTTCCTCTTAAA+AGG - chr3.1:14353567-14353586 MS.gene50870:intron 35.0%
!! GAATTTGTTAACATCCTTGC+CGG - chr3.1:14354242-14354261 MS.gene50870:intron 35.0%
!! GCTTCATTTCTGAAATGTCT+TGG + chr3.1:14354443-14354462 None:intergenic 35.0%
!!! CACCCGTTTTTTTTTGCTAT+TGG - chr3.1:14355924-14355943 MS.gene50870:intron 35.0%
!!! CCTGTTTTTTTCTTTGCGTT+AGG - chr3.1:14357015-14357034 MS.gene50870:intron 35.0%
!!! TTTTTTCCTTTGAGGAAGAC+AGG + chr3.1:14356360-14356379 None:intergenic 35.0%
AAAATGCAGCTAGTCATCGA+GGG + chr3.1:14356968-14356987 None:intergenic 40.0%
AAACCACTAGGCTGTAACAA+CGG - chr3.1:14356045-14356064 MS.gene50870:intron 40.0%
AACTGTCTGAATTCATCTGG+TGG - chr3.1:14356755-14356774 MS.gene50870:intron 40.0%
AAGAGGTCAACAAAGCATGA+TGG + chr3.1:14355837-14355856 None:intergenic 40.0%
AAGCTATCCTAGGGAGTTTA+TGG + chr3.1:14356560-14356579 None:intergenic 40.0%
AATTCGAGACCTTGCAATGT+TGG - chr3.1:14355280-14355299 MS.gene50870:intron 40.0%
ACCAACATCGCAGATATTAG+CGG - chr3.1:14353987-14354006 MS.gene50870:intron 40.0%
AGTCCAGCATTACATCACTA+AGG + chr3.1:14355741-14355760 None:intergenic 40.0%
ATAGACTTCCAGTGAACTTG+GGG - chr3.1:14354022-14354041 MS.gene50870:intron 40.0%
ATGTGGTTTCACACTACAGT+TGG + chr3.1:14355896-14355915 None:intergenic 40.0%
ATTCTACCTGTCTTCCTCAA+AGG - chr3.1:14356351-14356370 MS.gene50870:intron 40.0%
CCATTACCAACATTCTACCA+TGG + chr3.1:14353893-14353912 None:intergenic 40.0%
CGCTCTTTCGCTGTAAAAAT+TGG - chr3.1:14354988-14355007 MS.gene50870:CDS 40.0%
CTATTGGCACAACACTTGTA+AGG - chr3.1:14356528-14356547 MS.gene50870:intron 40.0%
CTCATGCAAATCCAAGTCAT+AGG + chr3.1:14354703-14354722 None:intergenic 40.0%
CTTAAACTCGTGAACCTTGA+TGG - chr3.1:14354057-14354076 MS.gene50870:intron 40.0%
CTTCAAAACCTATCACTGCA+TGG - chr3.1:14357557-14357576 MS.gene50870:intron 40.0%
CTTGAGGAAATCCAAACTCT+CGG - chr3.1:14353286-14353305 MS.gene50870:intron 40.0%
GATAGACTTCCAGTGAACTT+GGG - chr3.1:14354021-14354040 MS.gene50870:intron 40.0%
GCACGCCAATTCAAACTTAA+CGG + chr3.1:14357250-14357269 None:intergenic 40.0%
GCATTTGTCAATGATCCAGA+TGG - chr3.1:14357675-14357694 MS.gene50870:intron 40.0%
GGGATAATCGGGTAAGAATT+GGG - chr3.1:14356464-14356483 MS.gene50870:intron 40.0%
GGTCTCGAATTTCTTATGCA+AGG + chr3.1:14355271-14355290 None:intergenic 40.0%
GGTTATTCGCCACTATCATT+TGG - chr3.1:14357133-14357152 MS.gene50870:intron 40.0%
GGTTCACGAGTTTAAGAGAT+TGG + chr3.1:14354053-14354072 None:intergenic 40.0%
GTCATCGAGGGAAGTTAATT+TGG + chr3.1:14356956-14356975 None:intergenic 40.0%
TAAAATGCAGCTAGTCATCG+AGG + chr3.1:14356969-14356988 None:intergenic 40.0%
TAGGATTACCATGCAGTGAT+AGG + chr3.1:14357568-14357587 None:intergenic 40.0%
TATACGCATTCCCCTTTGTA+TGG + chr3.1:14357046-14357065 None:intergenic 40.0%
TCAGACAGTTAAAGGCAATG+GGG + chr3.1:14356745-14356764 None:intergenic 40.0%
TGGGATAATCGGGTAAGAAT+TGG - chr3.1:14356463-14356482 MS.gene50870:intron 40.0%
TGTAAATCCAAACAGGCTCA+AGG + chr3.1:14356495-14356514 None:intergenic 40.0%
TGTTAACAAATTCCCTGCGA+TGG + chr3.1:14354235-14354254 None:intergenic 40.0%
TTCATAGGTATCTGCCCAAA+AGG + chr3.1:14357515-14357534 None:intergenic 40.0%
TTGGAAGAATTACAGGCCAA+TGG - chr3.1:14354887-14354906 MS.gene50870:intron 40.0%
TTGTCAATGATCCAGATGGA+CGG - chr3.1:14357679-14357698 MS.gene50870:intron 40.0%
! AACAAAGCGTTCCTCATAAG+AGG + chr3.1:14355854-14355873 None:intergenic 40.0%
! AACAGGTATGCTCTTGTTTC+CGG - chr3.1:14357606-14357625 MS.gene50870:intron 40.0%
! AAGGTATCACCAAGACATTC+AGG + chr3.1:14357487-14357506 None:intergenic 40.0%
! ATCGAGGGAAGTTAATTTGG+TGG + chr3.1:14356953-14356972 None:intergenic 40.0%
! CACCTGTGCTCTCTTTTAAT+TGG - chr3.1:14353154-14353173 MS.gene50870:intron 40.0%
! CCATGGTAGAATGTTGGTAA+TGG - chr3.1:14353890-14353909 MS.gene50870:intron 40.0%
! CCCCTTAGAATCAATTTTGG+TGG - chr3.1:14352604-14352623 MS.gene50870:intron 40.0%
! CGACATTTTATGTGGAATCC+CGG + chr3.1:14356017-14356036 None:intergenic 40.0%
! CTATGACTTGGATTTGCATG+AGG - chr3.1:14354701-14354720 MS.gene50870:intron 40.0%
! GACATTTTATGTGGAATCCC+GGG + chr3.1:14356016-14356035 None:intergenic 40.0%
! GCGAACTCTTAGGATTTTAC+TGG - chr3.1:14357437-14357456 MS.gene50870:intron 40.0%
! GGCCACCAAAATTGATTCTA+AGG + chr3.1:14352609-14352628 None:intergenic 40.0%
! GTGATACCTTGGTTTCCTTT+TGG - chr3.1:14357497-14357516 MS.gene50870:intron 40.0%
! TGAATGTCTTGGTGATACCT+TGG - chr3.1:14357486-14357505 MS.gene50870:intron 40.0%
! TGCTTTGTTGACCTCTTATG+AGG - chr3.1:14355840-14355859 MS.gene50870:intron 40.0%
! TTTACAGCGAAAGAGCGTAA+GGG + chr3.1:14354985-14355004 None:intergenic 40.0%
!! AGCTCTGACGACATTTTATG+TGG + chr3.1:14356025-14356044 None:intergenic 40.0%
!! AGGAAAAGCACTTCTCTTTG+AGG + chr3.1:14353561-14353580 None:intergenic 40.0%
!! CGCTTTGTTGACCTTTTATG+AGG - chr3.1:14355865-14355884 MS.gene50870:intron 40.0%
!! TTTTACAGCGAAAGAGCGTA+AGG + chr3.1:14354986-14355005 None:intergenic 40.0%
!! TTTTAGTGGGCCAGTTAGTA+AGG - chr3.1:14354196-14354215 MS.gene50870:intron 40.0%
AAATAAACACACGTACGGGG+AGG - chr3.1:14355966-14355985 MS.gene50870:intron 45.0%
AACCACTAGGCTGTAACAAC+GGG - chr3.1:14356046-14356065 MS.gene50870:intron 45.0%
AAGCAACTCCCAACAGATTC+CGG + chr3.1:14354863-14354882 None:intergenic 45.0%
AATAAACACACGTACGGGGA+GGG - chr3.1:14355967-14355986 MS.gene50870:intron 45.0%
AATGGGGTCCTAAAGGATCT+GGG + chr3.1:14356729-14356748 None:intergenic 45.0%
ACTTGGATTTGCATGAGGCT+TGG - chr3.1:14354706-14354725 MS.gene50870:intron 45.0%
AGCGTTCAAGCCTTACTAAC+TGG + chr3.1:14354209-14354228 None:intergenic 45.0%
AGGAAATCCAAACTCTCGGT+CGG - chr3.1:14353290-14353309 MS.gene50870:intron 45.0%
AGGGAAGACCTCAATAAAGG+TGG + chr3.1:14355222-14355241 None:intergenic 45.0%
AGTCACTTCCGGAATCTGTT+GGG - chr3.1:14354852-14354871 MS.gene50870:intron 45.0%
ATCACGCAAAGCAACAATGC+CGG + chr3.1:14352107-14352126 None:intergenic 45.0%
ATCTGCCCAAAAGGAAACCA+AGG + chr3.1:14357506-14357525 None:intergenic 45.0%
ATTGATTAATGTGCAGCGCC+TGG - chr3.1:14353677-14353696 MS.gene50870:intron 45.0%
CAAGCATGGACAACAAACAC+AGG + chr3.1:14354537-14354556 None:intergenic 45.0%
CGAGAGTTTGGATTTCCTCA+AGG + chr3.1:14353288-14353307 None:intergenic 45.0%
CGATAGACTTCCAGTGAACT+TGG - chr3.1:14354020-14354039 MS.gene50870:intron 45.0%
CTCAAACTGCCAATAGTTGC+CGG + chr3.1:14354264-14354283 None:intergenic 45.0%
CTCAATAAAGGTGGCTAACC+AGG + chr3.1:14355213-14355232 None:intergenic 45.0%
GAGAGATTGCAAACTGACGA+AGG + chr3.1:14355659-14355678 None:intergenic 45.0%
TAAAGGCAATGGGGTCCTAA+AGG + chr3.1:14356736-14356755 None:intergenic 45.0%
TCACTGGAAGTCTATCGATG+AGG + chr3.1:14354017-14354036 None:intergenic 45.0%
TCCGCTAATATCTGCGATGT+TGG + chr3.1:14353991-14354010 None:intergenic 45.0%
TGTCAATGATCCAGATGGAC+GGG - chr3.1:14357680-14357699 MS.gene50870:intron 45.0%
TGTTGGGAGTTGCTTCTCTT+TGG - chr3.1:14354868-14354887 MS.gene50870:intron 45.0%
TTGAACGCTTATCCATCGCA+GGG - chr3.1:14354220-14354239 MS.gene50870:intron 45.0%
! CTGGTTAGCCACCTTTATTG+AGG - chr3.1:14355211-14355230 MS.gene50870:intron 45.0%
! TGTAACTTGCAGTATGGCCT+CGG + chr3.1:14356672-14356691 None:intergenic 45.0%
!!! TTTTTGGGGTGAATCTAGCG+TGG + chr3.1:14353182-14353201 None:intergenic 45.0%
AAGCCACTAGAATCTCACGC+TGG - chr3.1:14352074-14352093 MS.gene50870:CDS 50.0%
ACATCCTTGCCGGCAACTAT+TGG - chr3.1:14354252-14354271 MS.gene50870:intron 50.0%
ACCACTAGGCTGTAACAACG+GGG - chr3.1:14356047-14356066 MS.gene50870:intron 50.0%
ACTCTTGAAACCCGTCCATC+TGG + chr3.1:14357693-14357712 None:intergenic 50.0%
ATAAACACACGTACGGGGAG+GGG - chr3.1:14355968-14355987 MS.gene50870:intron 50.0%
ATGGGGTCCTAAAGGATCTG+GGG + chr3.1:14356728-14356747 None:intergenic 50.0%
CAATGGGGTCCTAAAGGATC+TGG + chr3.1:14356730-14356749 None:intergenic 50.0%
CACAAGTACTTACACTGCCG+AGG - chr3.1:14356652-14356671 MS.gene50870:intron 50.0%
CAGTCACTTCCGGAATCTGT+TGG - chr3.1:14354851-14354870 MS.gene50870:intron 50.0%
CTTGAACGCTTATCCATCGC+AGG - chr3.1:14354219-14354238 MS.gene50870:intron 50.0%
GATATCTCCGACCGAGAGTT+TGG + chr3.1:14353300-14353319 None:intergenic 50.0%
GCGTGAGATTCTAGTGGCTT+TGG + chr3.1:14352074-14352093 None:intergenic 50.0%
GGACAAACCCCAGATCCTTT+AGG - chr3.1:14356718-14356737 MS.gene50870:intron 50.0%
GGGAGGGAAGACCTCAATAA+AGG + chr3.1:14355225-14355244 None:intergenic 50.0%
GGTTCCAAAGGTCTCGATGA+GGG - chr3.1:14357769-14357788 MS.gene50870:CDS 50.0%
GGTTTGTCCTCGATGAGGTA+TGG + chr3.1:14356707-14356726 None:intergenic 50.0%
GTCGTCAGAGCTAAACCACT+AGG - chr3.1:14356033-14356052 MS.gene50870:intron 50.0%
TGGAGTTTCCCCAAGTTCAC+TGG + chr3.1:14354033-14354052 None:intergenic 50.0%
! TTTGAGCCTTGTGGTTGGGA+GGG + chr3.1:14355241-14355260 None:intergenic 50.0%
ACGCAAAGCAACAATGCCGG+TGG + chr3.1:14352104-14352123 None:intergenic 55.0%
ACTGCCAATAGTTGCCGGCA+AGG + chr3.1:14354259-14354278 None:intergenic 55.0%
CGGTTCCAAAGGTCTCGATG+AGG - chr3.1:14357768-14357787 MS.gene50870:CDS 55.0%
GACACCCTCATCGAGACCTT+TGG + chr3.1:14357776-14357795 None:intergenic 55.0%
GACTGCAGTTGACATTCCCG+TGG - chr3.1:14353644-14353663 MS.gene50870:intron 55.0%
GGACAGACCTTGAGCCTGTT+TGG - chr3.1:14356485-14356504 MS.gene50870:intron 55.0%
GTCCTCGATGAGGTATGGAC+CGG + chr3.1:14356702-14356721 None:intergenic 55.0%
TAAACACACGTACGGGGAGG+GGG - chr3.1:14355969-14355988 MS.gene50870:intron 55.0%
TCCCCGTTGTTACAGCCTAG+TGG + chr3.1:14356051-14356070 None:intergenic 55.0%
TCGCCAGCGTGAGATTCTAG+TGG + chr3.1:14352080-14352099 None:intergenic 55.0%
TGGAATCCCGGGCTTGAACT+CGG + chr3.1:14356005-14356024 None:intergenic 55.0%
TTCCGGTCCATACCTCATCG+AGG - chr3.1:14356697-14356716 MS.gene50870:intron 55.0%
! CGGGTTTGAGCCTTGTGGTT+GGG + chr3.1:14355245-14355264 None:intergenic 55.0%
! GTTTGAGCCTTGTGGTTGGG+AGG + chr3.1:14355242-14355261 None:intergenic 55.0%
! TCGGGTTTGAGCCTTGTGGT+TGG + chr3.1:14355246-14355265 None:intergenic 55.0%
! TCTGGGGTTTGTCCTCGATG+AGG + chr3.1:14356712-14356731 None:intergenic 55.0%
ATCTCACGCTGGCGATCCAC+CGG - chr3.1:14352085-14352104 MS.gene50870:CDS 60.0%
GGAATCCCGGGCTTGAACTC+GGG + chr3.1:14356004-14356023 None:intergenic 60.0%
GGTCTCGGGTTTGAGCCTTG+TGG + chr3.1:14355250-14355269 None:intergenic 60.0%
GGTCTTCCCTCCCAACCACA+AGG - chr3.1:14355232-14355251 MS.gene50870:intron 60.0%
TGGTGACCCGAGTTCAAGCC+CGG - chr3.1:14355995-14356014 MS.gene50870:intron 60.0%
GGTGACCCGAGTTCAAGCCC+GGG - chr3.1:14355996-14356015 MS.gene50870:intron 65.0%
CACGTACGGGGAGGGGGATG+TGG - chr3.1:14355975-14355994 MS.gene50870:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 14352040 14357804 14352040 ID=MS.gene50870
chr3.1 mRNA 14352040 14357804 14352040 ID=MS.gene50870.t1;Parent=MS.gene50870
chr3.1 exon 14357706 14357804 14357706 ID=MS.gene50870.t1.exon1;Parent=MS.gene50870.t1
chr3.1 CDS 14357706 14357804 14357706 ID=cds.MS.gene50870.t1;Parent=MS.gene50870.t1
chr3.1 exon 14356365 14356434 14356365 ID=MS.gene50870.t1.exon2;Parent=MS.gene50870.t1
chr3.1 CDS 14356365 14356434 14356365 ID=cds.MS.gene50870.t1;Parent=MS.gene50870.t1
chr3.1 exon 14356146 14356192 14356146 ID=MS.gene50870.t1.exon3;Parent=MS.gene50870.t1
chr3.1 CDS 14356146 14356192 14356146 ID=cds.MS.gene50870.t1;Parent=MS.gene50870.t1
chr3.1 exon 14355736 14355844 14355736 ID=MS.gene50870.t1.exon4;Parent=MS.gene50870.t1
chr3.1 CDS 14355736 14355844 14355736 ID=cds.MS.gene50870.t1;Parent=MS.gene50870.t1
chr3.1 exon 14355557 14355642 14355557 ID=MS.gene50870.t1.exon5;Parent=MS.gene50870.t1
chr3.1 CDS 14355557 14355642 14355557 ID=cds.MS.gene50870.t1;Parent=MS.gene50870.t1
chr3.1 exon 14354936 14355026 14354936 ID=MS.gene50870.t1.exon6;Parent=MS.gene50870.t1
chr3.1 CDS 14354936 14355026 14354936 ID=cds.MS.gene50870.t1;Parent=MS.gene50870.t1
chr3.1 exon 14354123 14354208 14354123 ID=MS.gene50870.t1.exon7;Parent=MS.gene50870.t1
chr3.1 CDS 14354123 14354208 14354123 ID=cds.MS.gene50870.t1;Parent=MS.gene50870.t1
chr3.1 exon 14352234 14352320 14352234 ID=MS.gene50870.t1.exon8;Parent=MS.gene50870.t1
chr3.1 CDS 14352234 14352320 14352234 ID=cds.MS.gene50870.t1;Parent=MS.gene50870.t1
chr3.1 exon 14352040 14352150 14352040 ID=MS.gene50870.t1.exon9;Parent=MS.gene50870.t1
chr3.1 CDS 14352040 14352150 14352040 ID=cds.MS.gene50870.t1;Parent=MS.gene50870.t1
Gene Sequence

>MS.gene50870

ATGGGTTGTATAGCTAGCAAAAACGCTGAAACCAAAGCCACTAGAATCTCACGCTGGCGATCCACCGGCATTGTTGCTTTGCGTGATTCCAAATTGAAGGTATCAACTAACTCAATCTTCTCCTTTTCATTTTCTTTTTTGTGTTGTTTGATTCTAATTATTTGATTTTGGATTCATGTTTTTTTATTGATTTGGATCATGGATAAGGTTTTTATTGATGCAGAAATGTTATTTGAATATCAATTTGATTGATAAGTTTTACTATATGGTTAATTCTGTATTGTAAGTTCAACTCAAATGATAAAAGGTTTTGATGATGAATTTCGCTGTTTTGTGTTTTTAAATAAAAAAAGGTTAATCGTATGTTTTGTTTTTTGGATGAATTGATTCTGGAGAATTGTGTGAGTTGAATGTAAAGTGATTTATGTTTGGATATATTTATGTAATAATGAGTTGAACAATACATTTGAGTGTTATAATCAATTTTAGAATCAAAAGCTCAAATTCTGGATGCAAATTCAATTCTACTCGAGAGCAACCAAACATGTCAGAATCAATTCTACACCCCTTAGAATCAATTTTGGTGGCCCATCTAGAAGTGAAACCAAATATACACTAATTCAGTTCACATATATAGTTAATGAATTAGTGTTAGATTTGGTTAATTGATGTATTGTTGCAACTAAATAGCCATATAATGGAATTTACTAACCACAAATTTAAAAGTGATTTTACTTGATTTTCATGCTTTCTAATCTGCGTGTATTTGGAATACCTGAAATCATGGTTAATAACGTTCAAATTTATGTTTAATTAAGTTCATTTGATGATTGATGAGTTGCTGAGTCTTGATATATTCATTAACTACTCATTGAAACGAGTTAACTACATGTGTGAAGTTGTGAGCTGCATTAACTGTTTAGAAAGCGTTGAGTTGTGTTATCCTAAATTGATGTTCAAATAACTATGTTACTCTATTTGGTAGTAGATTGTGAGCTGATTATATTATTTTGTATAGTTAGTTTGTGAATGATAGAGATTCACTTTGTCAAATTTTTATATAACCATCAGTTGTTTTTTTATTTATTCCAAAATGACAGTTTTGTGAAAGGAACACCTGTGCTCTCTTTTAATTGGAACCACGCTAGATTCACCCCAAAAAATAGTTAGTTCGTTAATTAGTTTTTATGGAAGAACATATGTTGGGGGAATGTTAGTTCGTTAAATGGATCTTTCATCTTTGTACCTTGAGGAAATCCAAACTCTCGGTCGGAGATATCCTGTATTTATACGTGCTTGAAGTTTCTGTGTGTGTATTTTTTTGAGGAAACATACTTACCTTGCTATCTTTCATTTTCCTTGAAAAACAGACTTTTCCAGATGAAATCATTGATTTAGACAGATCTGTTCGGACTCTTGACTTAACGCATAATCGAATAGGTAAACAAATTTTCTTTCCTTTTGTACATACGTTTTGGTTAAGAAACCTTTACTCTGAAGTAGTTGTAATAATTTTAACCTCAAAGAGAAGTGCTTTTCCTCTTAAAAGGTTATCATTATCATTGTTGATGCTGTTATTTTATTGCTAATAAGTTTATTTTCTTGACTGCAGTTGACATTCCCGTGGAAATTAGCAAATTGATTAATGTGCAGCGCCTGGTAAGAACATGAGATTTTACTTTATCCTTCCAGCATTTATTTCTTAAACACTACATTTCATCTTATGTTTGGAAGTTTAGCTACTCTTTGATTCTGGTGAAACCATTAAATTTCATTTATTCATTCTGAAACCCATACTTTTTGGACACTTCTTATGGATCTAAGCACAATGCTATCTTTCATTTGTTTTTCCATGGTAGAATGTTGGTAATGGCTGCATTACCATTTTTATTAGTGCTGTACTGTTTCTAACGATCAATAAAATATAATATTGCATACTGAAGTTTCACCAACATCGCAGATATTAGCGGACAACCTCATCGATAGACTTCCAGTGAACTTGGGGAAACTCCAATCTCTTAAACTCGTGAACCTTGATGGAAATCGAATTTCTTCCTTGCCAGATGAATGTAATTCTCTCCTTTAAGACAATAATATATTATTTGAAAGAGATCTTATTGTCCCTCTTTTATGTACTAACTTACAGTGTATTTTGTTTTTAGTGGGCCAGTTAGTAAGGCTTGAACGCTTATCCATCGCAGGGAATTTGTTAACATCCTTGCCGGCAACTATTGGCAGTTTGAGAAACGTAAGTAAATTATAAATAACAAAACCTAGATATCATCAAACTTTTATATTGCTTATGCAATTTGGATGATTATATGCATAATGCATTATGTGTAGATGTTATCATCACTGCATACTTGTCAGATTTTGAAGAGTTGAGAGCATCATTTTAAGCCAAGACATTTCAGAAATGAAGCTTTCTCCATGTCATACATTTGAAGACACAACACATCATTATTCAGTATTTGTCACGTCATTTGTGATGTAACCTGTGTTTGTTGTCCATGCTTGTTAGATAATATCCGTTTTCTGTTGACATGCTTACTTTCTAATCGAAGGAATGTTAAAGACACCCTTTTAACACTCAAGATTATTTTATTGTCGTTACTTTTCTTATCTTTAAATATAAACGATGGATGTATATGACATATTGACCTATGACTTGGATTTGCATGAGGCTTGGATCATAATCTTCCATTGTTAGCTGAAATTATGATATGAAATGCCCACCTTTATAACTTTTAAAGTATGATATCTTGTTTGATAATGTAGCTGTTGATTTTAAACGTCTCAAATAACAAGTTACAGTCACTTCCGGAATCTGTTGGGAGTTGCTTCTCTTTGGAAGAATTACAGGCCAATGGTATGTTGATTGATAGTTTGACACGATTTGTTCATTTCTGAATTGCATGAGCATGGTAGTGCATGTCTGTTTTCCCTTACGCTCTTTCGCTGTAAAAATTGGAAATAGTTTGGAGAGATTTTTTTACAAAACTATTGTGTTGTTTATTTAATTTTACTGGATTGTGTTGATTGTCAGTTCAATGCGGAGAATCTGCCTTGTTATATTTATTTCTATTCCAATGGTAGTTTTTGTTTAATGGAAGATATAAATCTGTTGTAGATATAAATTCAAGATTAGATTGCTTTAAGACAAATTTAAACCTGGTTAGCCACCTTTATTGAGGTCTTCCCTCCCAACCACAAGGCTCAAACCCGAGACCTTGCATAAGAAATTCGAGACCTTGCAATGTTGGTTTTAAGACTCTAAGTTTGAGATTACTTTTCAGCTCTTACATCTAATCTCTAAATTGATGCCATGCCGTTTGTATTGTTTTATGCTTTCTAGTTACTTGGTCTAGTTTAATATAATTTACTGAAGAGTCTCAATTTGGTTATAATTTAAGCAAACCACAATATTTTGGGGTGAAGAATTATTACAGTATACCATAAAACCATTTCTCTTGTGATTGGCTATTTCTATGATTGTCAAATCTGGATATTTAGAACATTTTGCGCCACCTTTATTATTATTTGGCTTCAAACTGATTCTGAATAAGCTAATTTCAGACTTTTTGCAAACATTTCAGATAATCTTATTGAAGATCTTCCTTCGTCAGTTTGCAATCTCTCTCACTTGAAGTCACTTTGCTTAGACAACAATAATGTGAAGCAGGTATTTTGTTTTAATACCTTAGTGATGTAATGCTGGACTTGATTGTTTCATTGTTCTCTTTTATCAATTTTTATTTATTTATTTATTTATTTTGTGAGTGCTTTTTGAATCTCCATCATGCTTTGTTGACCTCTTATGAGGAACGCTTTGTTGACCTTTTATGAGGAACATCCAACTGTAGTGTGAAACCACATATTTGTTTCACCCGTTTTTTTTTGCTATTGGACTAGTGGCCAACATGCTAAAATAAACACACGTACGGGGAGGGGGATGTGGTGACCCGAGTTCAAGCCCGGGATTCCACATAAAATGTCGTCAGAGCTAAACCACTAGGCTGTAACAACGGGGACATATTTGCTCAAATTGATTCTGTTTTATTATAGGGTTTAGTCTTTAAGTATAGAGAGAGAGGAAAAGGAACATTCAGAATAATAAAATTATATTGATATTAATGTGAATAATATATTACAAAAGATAACACACTGATTCTTATTTATATTTATACTAGATTCTAAATCCTTATTACATTCTCGAAAAAATAATTAAAATATGTGGAAACCAATTCTATGAGATAATATAAGATTTGATTTTCATTAAAGAGTACTGTTGTGGTTAGATATGTTTTTTATATTCTACCTGTCTTCCTCAAAGGAAAAAACATATATGGAATTCACAAATTATGACGGGAATGTCTATTAAAACAAGAGCTTTATAAATACAAGAGCCAAGTTAAATTGCATTTGGGATAATCGGGTAAGAATTGGGACAGACCTTGAGCCTGTTTGGATTTACATATTTCAGCTTATCTATTGGCACAACACTTGTAAGGTTAATTCCATAAACTCCCTAGGATAGCTTATAAAAACAGCTTATAGCTTAAATGAATACAATTTATTTTTATTTTATCTTTTGTTATAGAAATAATTTATACACAAGTACTTACACTGCCGAGGCCATACTGCAAGTTACACAATATTCCGGTCCATACCTCATCGAGGACAAACCCCAGATCCTTTAGGACCCCATTGCCTTTAACTGTCTGAATTCATCTGGTGGAACTGATTGTCACTGTTATATAGTAGTTTGTCTTGTCAAGTTTTCAGCATTTAAACTTTGCAGACTTGAATTTTGTTTACCATTTTTGCTTTTGAAGAATTTGAACTCAATATGTTCTGATCAAAGGATAAACTTTGAAATTACTTGAATTAATGCTTGGAGTTTTCTTTGTCCACCAAATTAACTTCCCTCGATGACTAGCTGCATTTTACAATTAGGTACAATGAATGAAGTGAACCTGTTTTTTTCTTTGCGTTAGGTTTTTCCATACAAAGGGGAATGCGTATATTTTCGTGAAGATAATGTAGCTTGAATATGAGGAATATCAAGTTTTATTCTTTCAACATGCATGAATGGTTATTCGCCACTATCATTTGGAAGAGTTGATTGAATGATGCACCAATTTCTAAATCAATATTTACAATTGTTCTAATGCTTTTTAAGCATGTCTCATGATTTATGAATTTGTCCGTTAAGTTTGAATTGGCGTGCAATAATATTTGTGTTCTTGTCTAGTCTGGGAACCCATCTTAGTTTAATTATTTGTCTGTTTCGCTATTGTGGTTTGCTTTGTTACTAAGTTAGAATGTTGAATATTTGCTATGCACATAGTGTAAATTAGGTGTAGGTACTATGCTTTTAATAAAATTCTGTATTAAGCGAACTCTTAGGATTTTACTGGTCCGATTCTACGAGTTTATGTAATCCTGAATGTCTTGGTGATACCTTGGTTTCCTTTTGGGCAGATACCTATGAATCTATTGAAAGATTGCAAAGCTCTTCAAAACCTATCACTGCATGGTAATCCTATATCAATGGATCAATTTCAACAGGTATGCTCTTGTTTCCGGATTTCTACTCTTCTTTTTCACTTTTCTATGTTTCAATGCAATTAAAGCATTTGTCAATGATCCAGATGGACGGGTTTCAAGAGTTTGAAGCAAGACGGAAAAAGAAATTTGACAAACAAATTGATTCAAACATAATGATCGGTTCCAAAGGTCTCGATGAGGGTGTCGATCTATGA
Protein sequence

>MS.gene50870.t1

MGCIASKNAETKATRISRWRSTGIVALRDSKLKTFPDEIIDLDRSVRTLDLTHNRIVDIPVEISKLINVQRLILADNLIDRLPVNLGKLQSLKLVNLDGNRISSLPDELGQLVRLERLSIAGNLLTSLPATIGSLRNLLILNVSNNKLQSLPESVGSCFSLEELQANDNLIEDLPSSVCNLSHLKSLCLDNNNVKQIPMNLLKDCKALQNLSLHGNPISMDQFQQMDGFQEFEARRKKKFDKQIDSNIMIGSKGLDEGVDL