Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066966.t1 | XP_003619849.1 | 98.4 | 311 | 5 | 0 | 1 | 311 | 1 | 311 | 3.70E-175 | 624 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066966.t1 | Q9SE51 | 61.5 | 262 | 97 | 2 | 54 | 311 | 71 | 332 | 1.7e-96 | 354.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066966.t1 | G7KQ87 | 98.4 | 311 | 5 | 0 | 1 | 311 | 1 | 311 | 2.7e-175 | 624.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65650 | MS.gene066966 | PPI |
| MS.gene066966 | MS.gene058245 | PPI |
| MS.gene00146 | MS.gene066966 | PPI |
| MS.gene55980 | MS.gene066966 | PPI |
| MS.gene67725 | MS.gene066966 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066966.t1 | MTR_6g069850 | 98.392 | 311 | 5 | 0 | 1 | 311 | 1 | 311 | 0.0 | 621 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066966.t1 | AT3G17910 | 60.448 | 268 | 102 | 2 | 48 | 311 | 65 | 332 | 1.36e-121 | 353 |
| MS.gene066966.t1 | AT1G48510 | 38.944 | 303 | 162 | 6 | 24 | 311 | 21 | 315 | 1.47e-64 | 208 |
| MS.gene066966.t1 | AT1G48510 | 38.944 | 303 | 160 | 7 | 24 | 311 | 21 | 313 | 2.71e-64 | 207 |
| MS.gene066966.t1 | AT1G48510 | 38.284 | 303 | 165 | 6 | 24 | 311 | 21 | 316 | 3.60e-63 | 204 |
| MS.gene066966.t1 | AT1G48510 | 42.358 | 229 | 118 | 3 | 92 | 311 | 1 | 224 | 5.63e-57 | 186 |
Find 106 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGATCGTGGTGGAGATTT+TGG | 0.170725 | 6.4:+47821658 | MS.gene066966:CDS |
| ATTTCAGGAGTTACTGAAAA+TGG | 0.223891 | 6.4:+47820101 | MS.gene066966:CDS |
| CCACGTTCAAGAAGCATTTC+AGG | 0.288011 | 6.4:+47820086 | MS.gene066966:CDS |
| GCGGAGCTCCGCAAGGATTC+TGG | 0.303888 | 6.4:-47817626 | None:intergenic |
| CATCCTCTGTTAACTAGAAT+TGG | 0.310516 | 6.4:-47821543 | None:intergenic |
| GAGCAATTGCATTTGGTCTT+GGG | 0.332922 | 6.4:+47817940 | MS.gene066966:CDS |
| TGAAAGGAAAAGCTTCTAAA+TGG | 0.344815 | 6.4:+47817901 | MS.gene066966:intron |
| GGAGCAATTGCATTTGGTCT+TGG | 0.353787 | 6.4:+47817939 | MS.gene066966:CDS |
| GCGGAGGTGGATGGTGGCAT+TGG | 0.353910 | 6.4:-47817601 | None:intergenic |
| TTACCTGGAGCAATTGCATT+TGG | 0.387630 | 6.4:+47817933 | MS.gene066966:CDS |
| TTCTGGAAGGCCGCAAGATC+GGG | 0.402652 | 6.4:-47822121 | None:intergenic |
| GGAAGAGGGTAAGGATTACT+TGG | 0.403772 | 6.4:-47822183 | None:intergenic |
| TTTGTTCCTGCAAATGATCC+TGG | 0.403973 | 6.4:+47822060 | MS.gene066966:CDS |
| AAGGATTCTGGCGGCGGAGG+TGG | 0.413809 | 6.4:-47817614 | None:intergenic |
| CGCAAGGATTCTGGCGGCGG+AGG | 0.414311 | 6.4:-47817617 | None:intergenic |
| ACCATGTTAATATGTAGTTT+AGG | 0.414596 | 6.4:-47822254 | None:intergenic |
| AAGTGAGGAGTTAGATTCTC+TGG | 0.420653 | 6.4:+47820004 | MS.gene066966:CDS |
| GAAGACCCAGGATCATTTGC+AGG | 0.423232 | 6.4:-47822066 | None:intergenic |
| AAACTTGTCTTTCCAACTGC+GGG | 0.437674 | 6.4:-47821571 | None:intergenic |
| TTGCATTTGGTCTTGGGAGT+TGG | 0.438591 | 6.4:+47817946 | MS.gene066966:CDS |
| AATGTTACAGATTAAAATGT+TGG | 0.450134 | 6.4:+47819923 | MS.gene066966:intron |
| CAATTCTAGTTAACAGAGGA+TGG | 0.450262 | 6.4:+47821544 | MS.gene066966:CDS |
| TTGCAGGAACAAATATGCTT+GGG | 0.457855 | 6.4:-47822050 | None:intergenic |
| TTTGCAGGAACAAATATGCT+TGG | 0.461261 | 6.4:-47822051 | None:intergenic |
| TAACACCTAACGAAGTGGTC+GGG | 0.463253 | 6.4:+47822007 | MS.gene066966:CDS |
| AAATGGTGGTTGTATTTACC+TGG | 0.465400 | 6.4:+47817918 | MS.gene066966:CDS |
| ATTCTGGCGGCGGAGGTGGA+TGG | 0.467723 | 6.4:-47817610 | None:intergenic |
| CTCCGCAAGGATTCTGGCGG+CGG | 0.468159 | 6.4:-47817620 | None:intergenic |
| TTTCTGGAAGGCCGCAAGAT+CGG | 0.468311 | 6.4:-47822122 | None:intergenic |
| TGATCATGAACTGGCATAAG+AGG | 0.470339 | 6.4:-47820140 | None:intergenic |
| GAATCTAACTCCTCACTTGA+CGG | 0.473964 | 6.4:-47819999 | None:intergenic |
| TACGCACCACTGAATTTCAA+TGG | 0.474966 | 6.4:-47819975 | None:intergenic |
| AGATTCTCTGGAATTTAGAA+AGG | 0.476299 | 6.4:+47820016 | MS.gene066966:CDS |
| TGAGTACTTACCATTTGAAT+CGG | 0.479731 | 6.4:-47817743 | None:intergenic |
| TCTTCTTCCTCCGATTCAAA+TGG | 0.486388 | 6.4:+47817733 | MS.gene066966:CDS |
| TGCCGGTGCGGGTGGAGATA+CGG | 0.487530 | 6.4:-47817648 | None:intergenic |
| CGCCGTATCTCCACCCGCAC+CGG | 0.488507 | 6.4:+47817646 | MS.gene066966:CDS |
| GATTGTTAGAAGAGAAGATA+AGG | 0.489684 | 6.4:+47817971 | MS.gene066966:CDS |
| CTGTCAGGATGATCATGAAC+TGG | 0.492334 | 6.4:-47820149 | None:intergenic |
| GAGGATGGGTTCCCCGCAGT+TGG | 0.495591 | 6.4:+47821559 | MS.gene066966:CDS |
| CCGCAAGATCGGGCAATGCT+AGG | 0.495974 | 6.4:-47822111 | None:intergenic |
| AGCGGAGCTTATGCCGGTGC+GGG | 0.497617 | 6.4:-47817659 | None:intergenic |
| GCTTGTGAAGGGGAAGGAAG+TGG | 0.503225 | 6.4:-47821627 | None:intergenic |
| CCAAAATCTCCACCACGATC+TGG | 0.504975 | 6.4:-47821658 | None:intergenic |
| ACTACCCCGACCACTTCGTT+AGG | 0.507230 | 6.4:-47822012 | None:intergenic |
| CCTTCCCCTTCACAAGCTGA+TGG | 0.512078 | 6.4:+47821633 | MS.gene066966:CDS |
| TCGAGGGAAGAGGTTGCAAA+TGG | 0.520408 | 6.4:+47819950 | MS.gene066966:CDS |
| CGGAGGAAGAAGAAAGTGTT+GGG | 0.522263 | 6.4:-47817723 | None:intergenic |
| ATCAAGGCATTAACATCCTT+AGG | 0.523796 | 6.4:-47822204 | None:intergenic |
| CTGGCGGCGGAGGTGGATGG+TGG | 0.531711 | 6.4:-47817607 | None:intergenic |
| TTGTTCCTGCAAATGATCCT+GGG | 0.533732 | 6.4:+47822061 | MS.gene066966:CDS |
| CATCACTGAACTTCGAATCA+AGG | 0.534814 | 6.4:-47822220 | None:intergenic |
| AGACCAAATGCAATTGCTCC+AGG | 0.535961 | 6.4:-47817936 | None:intergenic |
| GCATTAACATCCTTAGGAAG+AGG | 0.537524 | 6.4:-47822198 | None:intergenic |
| ATTAAAATGTTGGAGTATCG+AGG | 0.541307 | 6.4:+47819933 | MS.gene066966:CDS |
| GAGACAACCTCGCTGCTGAC+AGG | 0.542999 | 6.4:-47821690 | None:intergenic |
| ACATCCTTAGGAAGAGGGTA+AGG | 0.544644 | 6.4:-47822192 | None:intergenic |
| ATTTAGAAAGGTTGTCTGCA+AGG | 0.547498 | 6.4:+47820028 | MS.gene066966:CDS |
| TCGAAGTTCAGTGATGCCTC+AGG | 0.558011 | 6.4:+47822227 | MS.gene066966:CDS |
| TGGTTCCATCAGCTTGTGAA+GGG | 0.559259 | 6.4:-47821638 | None:intergenic |
| TAATCCTTACCCTCTTCCTA+AGG | 0.561040 | 6.4:+47822188 | MS.gene066966:CDS |
| TTTAGAAAGGTTGTCTGCAA+GGG | 0.561782 | 6.4:+47820029 | MS.gene066966:CDS |
| TGTTGGAGTATCGAGGGAAG+AGG | 0.567895 | 6.4:+47819940 | MS.gene066966:CDS |
| CTTCGTTAGGTGTTACAGAC+GGG | 0.568536 | 6.4:-47821999 | None:intergenic |
| CCTAGCATTGCCCGATCTTG+CGG | 0.570187 | 6.4:+47822111 | MS.gene066966:CDS |
| CAGTTCATGATCATCCTGAC+AGG | 0.571970 | 6.4:+47820150 | MS.gene066966:CDS |
| CAGCAGCAGAGCTGAATGAA+CGG | 0.575433 | 6.4:-47817684 | None:intergenic |
| CTGGTTCCATCAGCTTGTGA+AGG | 0.577371 | 6.4:-47821639 | None:intergenic |
| TCGGAGGAAGAAGAAAGTGT+TGG | 0.577887 | 6.4:-47817724 | None:intergenic |
| GAAGTGGTCGGGGTAGTTCG+CGG | 0.578152 | 6.4:+47822018 | MS.gene066966:CDS |
| CATTAACATCCTTAGGAAGA+GGG | 0.579056 | 6.4:-47822197 | None:intergenic |
| AATTCTAGTTAACAGAGGAT+GGG | 0.581794 | 6.4:+47821545 | MS.gene066966:CDS |
| ACGGACAGCGGAGCTTATGC+CGG | 0.586396 | 6.4:-47817665 | None:intergenic |
| GGAGCTTATGCCGGTGCGGG+TGG | 0.589785 | 6.4:-47817656 | None:intergenic |
| GGAAGAAGAAAGTGTTGGGT+CGG | 0.602196 | 6.4:-47817719 | None:intergenic |
| GTCTGTAACACCTAACGAAG+TGG | 0.603834 | 6.4:+47822002 | MS.gene066966:CDS |
| TTAAAATGTTGGAGTATCGA+GGG | 0.604898 | 6.4:+47819934 | MS.gene066966:CDS |
| ATGTTAATATGTAGTTTAGG+TGG | 0.606805 | 6.4:-47822251 | None:intergenic |
| AACACCTAACGAAGTGGTCG+GGG | 0.607807 | 6.4:+47822008 | MS.gene066966:CDS |
| CCATCAGCTTGTGAAGGGGA+AGG | 0.608531 | 6.4:-47821633 | None:intergenic |
| GTAACACCTAACGAAGTGGT+CGG | 0.608874 | 6.4:+47822006 | MS.gene066966:CDS |
| TAGGTGTTACAGACGGGACC+TGG | 0.609434 | 6.4:-47821993 | None:intergenic |
| CCTGAAATGCTTCTTGAACG+TGG | 0.609460 | 6.4:-47820086 | None:intergenic |
| ATGATCCTGGGTCTTCTCAG+TGG | 0.611113 | 6.4:+47822073 | MS.gene066966:CDS |
| CAGCGGAGCTTATGCCGGTG+CGG | 0.613402 | 6.4:-47817660 | None:intergenic |
| ACTTCGTTAGGTGTTACAGA+CGG | 0.614691 | 6.4:-47822000 | None:intergenic |
| ATGGAACCATTGAAATTCAG+TGG | 0.619217 | 6.4:+47819969 | MS.gene066966:CDS |
| AAAACTTGTCTTTCCAACTG+CGG | 0.623376 | 6.4:-47821572 | None:intergenic |
| CTCCGCCGCCAGAATCCTTG+CGG | 0.625176 | 6.4:+47817618 | MS.gene066966:CDS |
| ACCTAAACTACATATTAACA+TGG | 0.626458 | 6.4:+47822253 | MS.gene066966:CDS |
| TGTTGGGTCGGAATCAGAGA+CGG | 0.630196 | 6.4:-47817707 | None:intergenic |
| GTACTTACCATTTGAATCGG+AGG | 0.631701 | 6.4:-47817740 | None:intergenic |
| GAGCTCCGCAAGGATTCTGG+CGG | 0.633346 | 6.4:-47817623 | None:intergenic |
| AAGGAAAAGCTTCTAAATGG+TGG | 0.634466 | 6.4:+47817904 | MS.gene066966:intron |
| ATGTAGTTTAGGTGGTCCTG+AGG | 0.656016 | 6.4:-47822243 | None:intergenic |
| GGTTCCATCAGCTTGTGAAG+GGG | 0.657740 | 6.4:-47821637 | None:intergenic |
| AGATACGGCGGAGCTCCGCA+AGG | 0.664150 | 6.4:-47817633 | None:intergenic |
| AAGCTGATGGAACCAGATCG+TGG | 0.671297 | 6.4:+47821646 | MS.gene066966:CDS |
| TCTCCAATTCTAGTTAACAG+AGG | 0.674448 | 6.4:+47821540 | MS.gene066966:CDS |
| AGAGCTGAATGAACGGACAG+CGG | 0.674742 | 6.4:-47817677 | None:intergenic |
| AACTTGTCTTTCCAACTGCG+GGG | 0.690169 | 6.4:-47821570 | None:intergenic |
| TAGAACCACTGAGAAGACCC+AGG | 0.690589 | 6.4:-47822078 | None:intergenic |
| TGGTGCGTATCCGTCAAGTG+AGG | 0.699435 | 6.4:+47819989 | MS.gene066966:CDS |
| CGGTGCGGGTGGAGATACGG+CGG | 0.717755 | 6.4:-47817645 | None:intergenic |
| TAAAGAGCCTGTCAGCAGCG+AGG | 0.727366 | 6.4:+47821683 | MS.gene066966:CDS |
| CTGATGGAACCAGATCGTGG+TGG | 0.759524 | 6.4:+47821649 | MS.gene066966:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAAATAAATAATT+TGG | + | chr6.4:47818348-47818367 | MS.gene066966:intron | 0.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr6.4:47820789-47820808 | MS.gene066966:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr6.4:47820788-47820807 | MS.gene066966:intron | 10.0% |
| !! | TAATCTCTATAATTTATATT+AGG | + | chr6.4:47818190-47818209 | MS.gene066966:intron | 10.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | - | chr6.4:47820753-47820772 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr6.4:47820790-47820809 | MS.gene066966:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr6.4:47820854-47820873 | MS.gene066966:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr6.4:47820853-47820872 | MS.gene066966:intron | 15.0% |
| !!! | AAAAATGAACTTTTTCTTAA+AGG | - | chr6.4:47817829-47817848 | None:intergenic | 15.0% |
| !!! | AAAATGAACTTTTTCTTAAA+GGG | - | chr6.4:47817828-47817847 | None:intergenic | 15.0% |
| !!! | AAATTTTAATTATGAGAAAG+GGG | + | chr6.4:47818403-47818422 | MS.gene066966:intron | 15.0% |
| !!! | AACTATGTTTATATTGTTTT+TGG | + | chr6.4:47819154-47819173 | MS.gene066966:intron | 15.0% |
| !!! | AATGTTTTTATTGTTCAATT+TGG | - | chr6.4:47820570-47820589 | None:intergenic | 15.0% |
| !!! | AGTATTTTACTTTTGTTTTT+AGG | + | chr6.4:47821302-47821321 | MS.gene066966:intron | 15.0% |
| !!! | ATTGATTTTGATTATAAGAA+AGG | + | chr6.4:47818668-47818687 | MS.gene066966:intron | 15.0% |
| !!! | GAAATTTTAATTATGAGAAA+GGG | + | chr6.4:47818402-47818421 | MS.gene066966:intron | 15.0% |
| !!! | TGAAATTTTAATTATGAGAA+AGG | + | chr6.4:47818401-47818420 | MS.gene066966:intron | 15.0% |
| !!! | TTGATTTTGATTATAAGAAA+GGG | + | chr6.4:47818669-47818688 | MS.gene066966:intron | 15.0% |
| !!! | TTTTTTTTTTGGTATATGAA+AGG | + | chr6.4:47817885-47817904 | MS.gene066966:intron | 15.0% |
| !! | AAAAAAGAAAGAGAAATAGA+TGG | + | chr6.4:47821184-47821203 | MS.gene066966:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr6.4:47820813-47820832 | MS.gene066966:intron | 20.0% |
| !! | AACATTTATCATATGTAAAG+CGG | - | chr6.4:47820244-47820263 | None:intergenic | 20.0% |
| !! | AAGAATTATGTAGTGAAAAT+TGG | + | chr6.4:47818718-47818737 | MS.gene066966:intron | 20.0% |
| !! | AATGTTACAGATTAAAATGT+TGG | + | chr6.4:47819923-47819942 | MS.gene066966:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr6.4:47820886-47820905 | MS.gene066966:intron | 20.0% |
| !! | ATATGAAAATTGAAGAAACT+CGG | - | chr6.4:47821494-47821513 | None:intergenic | 20.0% |
| !! | ATATGTAAACAAACAACTTA+TGG | + | chr6.4:47819808-47819827 | MS.gene066966:intron | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | - | chr6.4:47820754-47820773 | None:intergenic | 20.0% |
| !! | CTTAATGCATCAAAAAATTA+TGG | - | chr6.4:47819455-47819474 | None:intergenic | 20.0% |
| !! | GATAAAAAATCAATCTATGT+GGG | + | chr6.4:47820062-47820081 | MS.gene066966:CDS | 20.0% |
| !! | GATATTTATGGAGATAATTT+AGG | + | chr6.4:47818084-47818103 | MS.gene066966:intron | 20.0% |
| !! | GGTAATAATTTAGGAAAATT+AGG | + | chr6.4:47818291-47818310 | MS.gene066966:intron | 20.0% |
| !! | GTCAGAATATAAAAATTGAA+TGG | - | chr6.4:47818015-47818034 | None:intergenic | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr6.4:47820887-47820906 | MS.gene066966:intron | 20.0% |
| !! | TAGTAGTTCTTAAATTTGAT+AGG | - | chr6.4:47820723-47820742 | None:intergenic | 20.0% |
| !! | TATCTAGATCACTAAAATAA+CGG | - | chr6.4:47819428-47819447 | None:intergenic | 20.0% |
| !!! | AGTATTTTACTTGTGTTTTT+AGG | - | chr6.4:47820431-47820450 | None:intergenic | 20.0% |
| !!! | ATTTGATAGGATCTAATTTT+AGG | - | chr6.4:47820710-47820729 | None:intergenic | 20.0% |
| !!! | CATAATTTTTTGATGCATTA+AGG | + | chr6.4:47819453-47819472 | MS.gene066966:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr6.4:47820923-47820942 | MS.gene066966:intron | 20.0% |
| !!! | TAAGTTTTTCCTTTTGATTA+AGG | + | chr6.4:47820281-47820300 | MS.gene066966:intron | 20.0% |
| !!! | TGATTTTGATTATAAGAAAG+GGG | + | chr6.4:47818670-47818689 | MS.gene066966:intron | 20.0% |
| ! | AAAATTAGGTGAATGTTTGT+CGG | + | chr6.4:47818305-47818324 | MS.gene066966:intron | 25.0% |
| ! | AAGAAATATTGTCGTTACTA+AGG | - | chr6.4:47819080-47819099 | None:intergenic | 25.0% |
| ! | AATTGAAGAAAGTAATTCAG+CGG | + | chr6.4:47821225-47821244 | MS.gene066966:intron | 25.0% |
| ! | AATTTGATAAATTCCTCATG+TGG | + | chr6.4:47817774-47817793 | MS.gene066966:intron | 25.0% |
| ! | ACCATGTTAATATGTAGTTT+AGG | - | chr6.4:47822257-47822276 | None:intergenic | 25.0% |
| ! | ACCTAAACTACATATTAACA+TGG | + | chr6.4:47822253-47822272 | MS.gene066966:CDS | 25.0% |
| ! | AGATTAATTCAATGCATTGA+CGG | - | chr6.4:47818176-47818195 | None:intergenic | 25.0% |
| ! | AGTTTATCACTTCATCAATA+TGG | - | chr6.4:47819003-47819022 | None:intergenic | 25.0% |
| ! | ATAGAGATGTAATGTAATAG+TGG | - | chr6.4:47819522-47819541 | None:intergenic | 25.0% |
| ! | ATGTTAATATGTAGTTTAGG+TGG | - | chr6.4:47822254-47822273 | None:intergenic | 25.0% |
| ! | ATTTGATAAATTCCTCATGT+GGG | + | chr6.4:47817775-47817794 | MS.gene066966:intron | 25.0% |
| ! | CCAAATTTAAGCATTAAACA+AGG | - | chr6.4:47821746-47821765 | None:intergenic | 25.0% |
| ! | CGATAAAAAATCAATCTATG+TGG | + | chr6.4:47820061-47820080 | MS.gene066966:CDS | 25.0% |
| ! | CTGCTAATTAAAATTACCAA+TGG | + | chr6.4:47820682-47820701 | MS.gene066966:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr6.4:47820812-47820831 | MS.gene066966:intron | 25.0% |
| ! | TAATCTGTAACATTGTAAGA+TGG | - | chr6.4:47819917-47819936 | None:intergenic | 25.0% |
| ! | TTGAAGATGTAATGAAGTAA+TGG | - | chr6.4:47820649-47820668 | None:intergenic | 25.0% |
| !! | AAATTTTTGTTCTGTGTTTG+TGG | + | chr6.4:47819207-47819226 | MS.gene066966:intron | 25.0% |
| !! | CCTTGTTTAATGCTTAAATT+TGG | + | chr6.4:47821743-47821762 | MS.gene066966:intron | 25.0% |
| !! | TGTTCTTTTGTGTATGATAA+TGG | - | chr6.4:47820618-47820637 | None:intergenic | 25.0% |
| !!! | GATTTTGATTATAAGAAAGG+GGG | + | chr6.4:47818671-47818690 | MS.gene066966:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr6.4:47820922-47820941 | MS.gene066966:intron | 25.0% |
| AAATTGAGCTCTTTACCAAA+AGG | - | chr6.4:47819682-47819701 | None:intergenic | 30.0% | |
| AACACCTTTGATCGATAATT+CGG | + | chr6.4:47818601-47818620 | MS.gene066966:intron | 30.0% | |
| AAGGGTTCAAATCTATTTAG+TGG | - | chr6.4:47818936-47818955 | None:intergenic | 30.0% | |
| AATCCAATAATGAAGATCGA+CGG | - | chr6.4:47819037-47819056 | None:intergenic | 30.0% | |
| AATTGAAGAAAGTAACTCAG+CGG | - | chr6.4:47820508-47820527 | None:intergenic | 30.0% | |
| AGGGATAATCCTTAATCAAA+AGG | - | chr6.4:47820293-47820312 | None:intergenic | 30.0% | |
| ATTTCAGGAGTTACTGAAAA+TGG | + | chr6.4:47820101-47820120 | MS.gene066966:CDS | 30.0% | |
| CTAAATAGATTTGAACCCTT+TGG | + | chr6.4:47818936-47818955 | MS.gene066966:intron | 30.0% | |
| GATTGTTAGAAGAGAAGATA+AGG | + | chr6.4:47817971-47817990 | MS.gene066966:CDS | 30.0% | |
| GTGAAAATTGGATAGAGATT+TGG | + | chr6.4:47818730-47818749 | MS.gene066966:intron | 30.0% | |
| GTTGACACTGGTAATAATTT+AGG | + | chr6.4:47818282-47818301 | MS.gene066966:intron | 30.0% | |
| TAAACAAGGAACGATATGAT+GGG | - | chr6.4:47821732-47821751 | None:intergenic | 30.0% | |
| TAGTGGAAAATATGTGAATG+TGG | + | chr6.4:47819119-47819138 | MS.gene066966:intron | 30.0% | |
| TCACTAGACTCGAATTTAAA+AGG | + | chr6.4:47820342-47820361 | MS.gene066966:intron | 30.0% | |
| TGAAAGGAAAAGCTTCTAAA+TGG | + | chr6.4:47817901-47817920 | MS.gene066966:intron | 30.0% | |
| TGAGTACTTACCATTTGAAT+CGG | - | chr6.4:47817746-47817765 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr6.4:47820797-47820816 | MS.gene066966:intron | 30.0% | |
| TGTTTACATATTATTCCCCT+GGG | - | chr6.4:47819799-47819818 | None:intergenic | 30.0% | |
| TTAAACAAGGAACGATATGA+TGG | - | chr6.4:47821733-47821752 | None:intergenic | 30.0% | |
| TTGTGTCAATTAAATTGGGA+CGG | - | chr6.4:47820749-47820768 | None:intergenic | 30.0% | |
| TTGTTTACATATTATTCCCC+TGG | - | chr6.4:47819800-47819819 | None:intergenic | 30.0% | |
| TTTAAGCCATCTACATATCA+AGG | - | chr6.4:47819629-47819648 | None:intergenic | 30.0% | |
| ! | AAGATATCATTGATGGCAAA+AGG | + | chr6.4:47821108-47821127 | MS.gene066966:intron | 30.0% |
| ! | AATTCTAGTTAACAGAGGAT+GGG | + | chr6.4:47821545-47821564 | MS.gene066966:CDS | 30.0% |
| ! | AGATATCATTGATGGCAAAA+GGG | + | chr6.4:47821109-47821128 | MS.gene066966:intron | 30.0% |
| ! | AGATGTATGATTTTTGCCAA+AGG | - | chr6.4:47818955-47818974 | None:intergenic | 30.0% |
| ! | ATGGTGGAATTTAATGCAAT+CGG | - | chr6.4:47820599-47820618 | None:intergenic | 30.0% |
| ! | ATGTTTTCATAATCTATCCC+AGG | + | chr6.4:47819779-47819798 | MS.gene066966:intron | 30.0% |
| ! | GACTCGAATTTAAAAGGTTT+TGG | + | chr6.4:47820348-47820367 | MS.gene066966:intron | 30.0% |
| ! | GATGTATGATTTTTGCCAAA+GGG | - | chr6.4:47818954-47818973 | None:intergenic | 30.0% |
| ! | GGAAGTTTTTGATGTCAAAA+AGG | - | chr6.4:47821342-47821323 | None:intergenic | 30.0% |
| ! | TCAACATAGACAGTATTTTC+TGG | - | chr6.4:47822141-47822160 | None:intergenic | 30.0% |
| ! | TGTAATGAAGTAATGGAATC+TGG | - | chr6.4:47820642-47820661 | None:intergenic | 30.0% |
| ! | TGTTTTCATAATCTATCCCA+GGG | + | chr6.4:47819780-47819799 | MS.gene066966:intron | 30.0% |
| !! | AGATTCTCTGGAATTTAGAA+AGG | + | chr6.4:47820016-47820035 | MS.gene066966:CDS | 30.0% |
| !! | ATTAAAATGTTGGAGTATCG+AGG | + | chr6.4:47819933-47819952 | MS.gene066966:CDS | 30.0% |
| !! | GATCTAATTTTAGGAACCAT+TGG | - | chr6.4:47820701-47820720 | None:intergenic | 30.0% |
| !! | TAAATAATTTGGTGCTACAG+AGG | + | chr6.4:47818359-47818378 | MS.gene066966:intron | 30.0% |
| !! | TGAAATGGGTCACTTATTTT+AGG | + | chr6.4:47820901-47820920 | MS.gene066966:intron | 30.0% |
| !! | TTAAAATGTTGGAGTATCGA+GGG | + | chr6.4:47819934-47819953 | MS.gene066966:CDS | 30.0% |
| !! | TTGCTATTATTTTGCGATAC+AGG | + | chr6.4:47818803-47818822 | MS.gene066966:intron | 30.0% |
| !! | TTGGAAAGACAAGTTTTTAG+AGG | + | chr6.4:47821578-47821597 | MS.gene066966:CDS | 30.0% |
| !!! | AGAATTTTTTGTGTGCCTTT+TGG | + | chr6.4:47819664-47819683 | MS.gene066966:intron | 30.0% |
| !!! | ATGATTTTGATTTACCTGTC+AGG | - | chr6.4:47820167-47820186 | None:intergenic | 30.0% |
| !!! | CATCACAGTGTCATTTTTAT+AGG | - | chr6.4:47818117-47818136 | None:intergenic | 30.0% |
| !!! | GCAATTTTCTAGAGCTTATA+GGG | - | chr6.4:47820388-47820407 | None:intergenic | 30.0% |
| !!! | TCTTTTGTGTATGATAATGG+TGG | - | chr6.4:47820615-47820634 | None:intergenic | 30.0% |
| !!! | TTTTTTATCAAAAGCATCCC+TGG | - | chr6.4:47818334-47818353 | None:intergenic | 30.0% |
| AAAACTTGTCTTTCCAACTG+CGG | - | chr6.4:47821575-47821594 | None:intergenic | 35.0% | |
| AAATACTTAAATGCCCTCAG+CGG | - | chr6.4:47821289-47821308 | None:intergenic | 35.0% | |
| AAATGGTGGTTGTATTTACC+TGG | + | chr6.4:47817918-47817937 | MS.gene066966:CDS | 35.0% | |
| AAGGAAAAGCTTCTAAATGG+TGG | + | chr6.4:47817904-47817923 | MS.gene066966:intron | 35.0% | |
| AATGACTTAGTCTACAAGCT+TGG | + | chr6.4:47819243-47819262 | MS.gene066966:intron | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr6.4:47820936-47820955 | MS.gene066966:intron | 35.0% | |
| ATACAGCCAACTCAAAAACA+TGG | - | chr6.4:47821463-47821482 | None:intergenic | 35.0% | |
| ATAGCAAAAGGGAAATGACA+TGG | + | chr6.4:47821148-47821167 | MS.gene066966:intron | 35.0% | |
| ATAGCGTAGTGTAATTTGGA+CGG | + | chr6.4:47818779-47818798 | MS.gene066966:intron | 35.0% | |
| ATCCAATAATGAAGATCGAC+GGG | - | chr6.4:47819036-47819055 | None:intergenic | 35.0% | |
| ATCTACCTCAGCATGATTTA+AGG | - | chr6.4:47818067-47818086 | None:intergenic | 35.0% | |
| ATGACTAGAAATCTCCTTGA+CGG | - | chr6.4:47819571-47819590 | None:intergenic | 35.0% | |
| ATGGAACCATTGAAATTCAG+TGG | + | chr6.4:47819969-47819988 | MS.gene066966:CDS | 35.0% | |
| ATTCACATTCACTGAGATAC+TGG | + | chr6.4:47819054-47819073 | MS.gene066966:intron | 35.0% | |
| ATTTAGAAAGGTTGTCTGCA+AGG | + | chr6.4:47820028-47820047 | MS.gene066966:CDS | 35.0% | |
| ATTTCCCTTGAAGTGATTGT+TGG | + | chr6.4:47821056-47821075 | MS.gene066966:intron | 35.0% | |
| ATTTCTTACTCCAGCCAATT+CGG | + | chr6.4:47819093-47819112 | MS.gene066966:intron | 35.0% | |
| CATCCTCTGTTAACTAGAAT+TGG | - | chr6.4:47821546-47821565 | None:intergenic | 35.0% | |
| CATGCTGAGGTAGATATTTA+TGG | + | chr6.4:47818072-47818091 | MS.gene066966:intron | 35.0% | |
| CATTAACATCCTTAGGAAGA+GGG | - | chr6.4:47822200-47822219 | None:intergenic | 35.0% | |
| CCATCTACATATCAAGGAAA+TGG | - | chr6.4:47819623-47819642 | None:intergenic | 35.0% | |
| CCATTTCCTTGATATGTAGA+TGG | + | chr6.4:47819620-47819639 | MS.gene066966:intron | 35.0% | |
| CGATAATCAAAGAGTGAACA+TGG | + | chr6.4:47819739-47819758 | MS.gene066966:intron | 35.0% | |
| CTTCACGAAGATATCATTGA+TGG | + | chr6.4:47821101-47821120 | MS.gene066966:intron | 35.0% | |
| GAGCTCAATTTAGTGCTTAT+TGG | + | chr6.4:47819691-47819710 | MS.gene066966:intron | 35.0% | |
| TCTACATATCAAGGAAATGG+AGG | - | chr6.4:47819620-47819639 | None:intergenic | 35.0% | |
| TTAAAACGTTGCTCGTTTAC+AGG | + | chr6.4:47821969-47821988 | MS.gene066966:intron | 35.0% | |
| TTAAGGATTATCCCTTCTTG+CGG | + | chr6.4:47820298-47820317 | MS.gene066966:intron | 35.0% | |
| TTAATTATGAGAAAGGGGCA+AGG | + | chr6.4:47818408-47818427 | MS.gene066966:intron | 35.0% | |
| TTATCAATTGCTTGCTTTGC+AGG | + | chr6.4:47821431-47821450 | MS.gene066966:intron | 35.0% | |
| TTGCAGGAACAAATATGCTT+GGG | - | chr6.4:47822053-47822072 | None:intergenic | 35.0% | |
| TTTAGAAAGGTTGTCTGCAA+GGG | + | chr6.4:47820029-47820048 | MS.gene066966:CDS | 35.0% | |
| TTTGCAGGAACAAATATGCT+TGG | - | chr6.4:47822054-47822073 | None:intergenic | 35.0% | |
| ! | ATCAAGGCATTAACATCCTT+AGG | - | chr6.4:47822207-47822226 | None:intergenic | 35.0% |
| ! | ATTTTCCACTAGATCCGAAT+TGG | - | chr6.4:47819110-47819129 | None:intergenic | 35.0% |
| ! | CAATTCTAGTTAACAGAGGA+TGG | + | chr6.4:47821544-47821563 | MS.gene066966:CDS | 35.0% |
| ! | CATAGACAGTATTTTCTGGA+AGG | - | chr6.4:47822137-47822156 | None:intergenic | 35.0% |
| ! | GTTTTCATAATCTATCCCAG+GGG | + | chr6.4:47819781-47819800 | MS.gene066966:intron | 35.0% |
| ! | TATGATGGGAAAATGACTAG+AGG | - | chr6.4:47821718-47821737 | None:intergenic | 35.0% |
| ! | TCTCCAATTCTAGTTAACAG+AGG | + | chr6.4:47821540-47821559 | MS.gene066966:CDS | 35.0% |
| !! | AGAGTTTTGTCATGTGAATC+AGG | + | chr6.4:47819181-47819200 | MS.gene066966:intron | 35.0% |
| !! | AGTTTTGTCATGTGAATCAG+GGG | + | chr6.4:47819183-47819202 | MS.gene066966:intron | 35.0% |
| !! | GAGTTTTGTCATGTGAATCA+GGG | + | chr6.4:47819182-47819201 | MS.gene066966:intron | 35.0% |
| !! | TCAAGGAGATTTCTAGTCAT+AGG | + | chr6.4:47819571-47819590 | MS.gene066966:intron | 35.0% |
| !! | TCGATAATTCGGTGCTATTT+AGG | + | chr6.4:47818612-47818631 | MS.gene066966:intron | 35.0% |
| !!! | CTACTTCCATGTTTTTGAGT+TGG | + | chr6.4:47821454-47821473 | MS.gene066966:intron | 35.0% |
| !!! | GGCAATTTTCTAGAGCTTAT+AGG | - | chr6.4:47820389-47820408 | None:intergenic | 35.0% |
| AAACTTGTCTTTCCAACTGC+GGG | - | chr6.4:47821574-47821593 | None:intergenic | 40.0% | |
| AAATACTTAAATGCCCCCAG+CGG | + | chr6.4:47820444-47820463 | MS.gene066966:intron | 40.0% | |
| AACCCGTCGATCTTCATTAT+TGG | + | chr6.4:47819031-47819050 | MS.gene066966:intron | 40.0% | |
| AAGTGAGGAGTTAGATTCTC+TGG | + | chr6.4:47820004-47820023 | MS.gene066966:CDS | 40.0% | |
| ACATATCAAGGAAATGGAGG+AGG | - | chr6.4:47819617-47819636 | None:intergenic | 40.0% | |
| ACTTGTTCTTCCTGGTGAAT+TGG | - | chr6.4:47821021-47821040 | None:intergenic | 40.0% | |
| AGAAGCCAACAATCACTTCA+AGG | - | chr6.4:47821064-47821083 | None:intergenic | 40.0% | |
| AGTGTTGTAGCTAGTGGAAT+TGG | + | chr6.4:47818869-47818888 | MS.gene066966:intron | 40.0% | |
| ATACATATTGAGCCGCAAGA+AGG | - | chr6.4:47820313-47820332 | None:intergenic | 40.0% | |
| CACTTTAGTGTTGTAGCTAG+TGG | + | chr6.4:47818863-47818882 | MS.gene066966:intron | 40.0% | |
| CATCACTGAACTTCGAATCA+AGG | - | chr6.4:47822223-47822242 | None:intergenic | 40.0% | |
| CCAGTGATATCTTTCAGTCA+TGG | + | chr6.4:47821815-47821834 | MS.gene066966:intron | 40.0% | |
| CCATGACTGAAAGATATCAC+TGG | - | chr6.4:47821818-47821837 | None:intergenic | 40.0% | |
| CGACATAGCGTAGTGTAATT+TGG | + | chr6.4:47818775-47818794 | MS.gene066966:intron | 40.0% | |
| CTACAGTAGAGAAGGAGAAT+AGG | - | chr6.4:47819345-47819364 | None:intergenic | 40.0% | |
| CTATTTCAAGCCACTGAACT+AGG | + | chr6.4:47821843-47821862 | MS.gene066966:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr6.4:47820937-47820956 | MS.gene066966:intron | 40.0% | |
| GAAGCCAACAATCACTTCAA+GGG | - | chr6.4:47821063-47821082 | None:intergenic | 40.0% | |
| GAATCTAACTCCTCACTTGA+CGG | - | chr6.4:47820002-47820021 | None:intergenic | 40.0% | |
| GATTGGATGCTCGTGTAAAA+AGG | + | chr6.4:47818143-47818162 | MS.gene066966:intron | 40.0% | |
| GCATTAACATCCTTAGGAAG+AGG | - | chr6.4:47822201-47822220 | None:intergenic | 40.0% | |
| GGGAAAGAGAGATAGAAAGA+AGG | + | chr6.4:47818691-47818710 | MS.gene066966:intron | 40.0% | |
| GTACTTACCATTTGAATCGG+AGG | - | chr6.4:47817743-47817762 | None:intergenic | 40.0% | |
| GTGCAAAGTGATGCAAATTG+CGG | + | chr6.4:47818831-47818850 | MS.gene066966:intron | 40.0% | |
| TAATCCTTACCCTCTTCCTA+AGG | + | chr6.4:47822188-47822207 | MS.gene066966:CDS | 40.0% | |
| TACATATTGAGCCGCAAGAA+GGG | - | chr6.4:47820312-47820331 | None:intergenic | 40.0% | |
| TACCTCAGCATGATTTAAGG+TGG | - | chr6.4:47818064-47818083 | None:intergenic | 40.0% | |
| TACGCACCACTGAATTTCAA+TGG | - | chr6.4:47819978-47819997 | None:intergenic | 40.0% | |
| TCACGGATCACATGAAATAG+TGG | - | chr6.4:47818901-47818920 | None:intergenic | 40.0% | |
| TCTTCTTCCTCCGATTCAAA+TGG | + | chr6.4:47817733-47817752 | MS.gene066966:CDS | 40.0% | |
| TGACTAGAAATCTCCTTGAC+GGG | - | chr6.4:47819570-47819589 | None:intergenic | 40.0% | |
| TGATCATGAACTGGCATAAG+AGG | - | chr6.4:47820143-47820162 | None:intergenic | 40.0% | |
| TGTCAATTAAATTGGGACGG+AGG | - | chr6.4:47820746-47820765 | None:intergenic | 40.0% | |
| TTACCTGGAGCAATTGCATT+TGG | + | chr6.4:47817933-47817952 | MS.gene066966:CDS | 40.0% | |
| TTGTTCCTGCAAATGATCCT+GGG | + | chr6.4:47822061-47822080 | MS.gene066966:CDS | 40.0% | |
| TTTGTTCCTGCAAATGATCC+TGG | + | chr6.4:47822060-47822079 | MS.gene066966:CDS | 40.0% | |
| TTTGTTCTGTGTTTGTGGTG+AGG | + | chr6.4:47819212-47819231 | MS.gene066966:intron | 40.0% | |
| ! | ACCTCAGCATGATTTAAGGT+GGG | - | chr6.4:47818063-47818082 | None:intergenic | 40.0% |
| ! | ACTTCGTTAGGTGTTACAGA+CGG | - | chr6.4:47822003-47822022 | None:intergenic | 40.0% |
| ! | AGCACCGAATTATCGATCAA+AGG | - | chr6.4:47818608-47818627 | None:intergenic | 40.0% |
| ! | GAGCAATTGCATTTGGTCTT+GGG | + | chr6.4:47817940-47817959 | MS.gene066966:CDS | 40.0% |
| ! | TATCATTGATGGCAAAAGGG+AGG | + | chr6.4:47821112-47821131 | MS.gene066966:intron | 40.0% |
| !! | ACACTGTGATGTGAGTTGAT+TGG | + | chr6.4:47818126-47818145 | MS.gene066966:intron | 40.0% |
| !! | GAGATTTGGTGCATTGTTAG+CGG | + | chr6.4:47818744-47818763 | MS.gene066966:intron | 40.0% |
| AACGGTAGTTAACTACCGCT+GGG | - | chr6.4:47821290-47821271 | None:intergenic | 45.0% | |
| AACTTGTCTTTCCAACTGCG+GGG | - | chr6.4:47821573-47821592 | None:intergenic | 45.0% | |
| ACATCCTTAGGAAGAGGGTA+AGG | - | chr6.4:47822195-47822214 | None:intergenic | 45.0% | |
| ACATTCGGCTACAGTAGAGA+AGG | - | chr6.4:47819353-47819372 | None:intergenic | 45.0% | |
| ACCCACCTTAAATCATGCTG+AGG | + | chr6.4:47818059-47818078 | MS.gene066966:intron | 45.0% | |
| ACCCTCAGAAACAGCATGTT+TGG | + | chr6.4:47820995-47821014 | MS.gene066966:intron | 45.0% | |
| AGACCAAATGCAATTGCTCC+AGG | - | chr6.4:47817939-47817958 | None:intergenic | 45.0% | |
| AGTAAACTTGGTCACAGCCT+TGG | + | chr6.4:47820971-47820990 | MS.gene066966:intron | 45.0% | |
| AGTGGCAGTGTTGTCAATCA+CGG | - | chr6.4:47818918-47818937 | None:intergenic | 45.0% | |
| ATGTAGTTTAGGTGGTCCTG+AGG | - | chr6.4:47822246-47822265 | None:intergenic | 45.0% | |
| CAGTTCATGATCATCCTGAC+AGG | + | chr6.4:47820150-47820169 | MS.gene066966:CDS | 45.0% | |
| CCTGAAATGCTTCTTGAACG+TGG | - | chr6.4:47820089-47820108 | None:intergenic | 45.0% | |
| CTAGTCATAGGCTCATGTTG+TGG | + | chr6.4:47819583-47819602 | MS.gene066966:intron | 45.0% | |
| CTGTCAGGATGATCATGAAC+TGG | - | chr6.4:47820152-47820171 | None:intergenic | 45.0% | |
| GGAAGAGGGTAAGGATTACT+TGG | - | chr6.4:47822186-47822205 | None:intergenic | 45.0% | |
| GGAGCAATTGCATTTGGTCT+TGG | + | chr6.4:47817939-47817958 | MS.gene066966:CDS | 45.0% | |
| GGGGCTGTAAGATAGCAAAA+GGG | + | chr6.4:47821137-47821156 | MS.gene066966:intron | 45.0% | |
| GTAACACCTAACGAAGTGGT+CGG | + | chr6.4:47822006-47822025 | MS.gene066966:CDS | 45.0% | |
| GTCTGTAACACCTAACGAAG+TGG | + | chr6.4:47822002-47822021 | MS.gene066966:CDS | 45.0% | |
| TAACACCTAACGAAGTGGTC+GGG | + | chr6.4:47822007-47822026 | MS.gene066966:CDS | 45.0% | |
| TCCTAAGTCTTAACCCGTCA+AGG | + | chr6.4:47819554-47819573 | MS.gene066966:intron | 45.0% | |
| TGAATGTTTGTCGGACACCA+GGG | + | chr6.4:47818314-47818333 | MS.gene066966:intron | 45.0% | |
| TGGGGCTGTAAGATAGCAAA+AGG | + | chr6.4:47821136-47821155 | MS.gene066966:intron | 45.0% | |
| TGGTTCCATCAGCTTGTGAA+GGG | - | chr6.4:47821641-47821660 | None:intergenic | 45.0% | |
| ! | ATTGATGGCAAAAGGGAGGA+TGG | + | chr6.4:47821116-47821135 | MS.gene066966:intron | 45.0% |
| ! | CTTCGTTAGGTGTTACAGAC+GGG | - | chr6.4:47822002-47822021 | None:intergenic | 45.0% |
| ! | TCGGAGGAAGAAGAAAGTGT+TGG | - | chr6.4:47817727-47817746 | None:intergenic | 45.0% |
| ! | TTGATGGCAAAAGGGAGGAT+GGG | + | chr6.4:47821117-47821136 | MS.gene066966:intron | 45.0% |
| !! | CCACGTTCAAGAAGCATTTC+AGG | + | chr6.4:47820086-47820105 | MS.gene066966:CDS | 45.0% |
| !! | CGGAGGAAGAAGAAAGTGTT+GGG | - | chr6.4:47817726-47817745 | None:intergenic | 45.0% |
| !! | GCCAAACATGCTGTTTCTGA+GGG | - | chr6.4:47820999-47821018 | None:intergenic | 45.0% |
| !! | GGAAGAAGAAAGTGTTGGGT+CGG | - | chr6.4:47817722-47817741 | None:intergenic | 45.0% |
| !! | GTTCAGCTTGTTGAACTGTC+TGG | + | chr6.4:47821922-47821941 | MS.gene066966:intron | 45.0% |
| !! | TCCTTGACGGGTTAAGACTT+AGG | - | chr6.4:47819558-47819577 | None:intergenic | 45.0% |
| !! | TTGCATTTGGTCTTGGGAGT+TGG | + | chr6.4:47817946-47817965 | MS.gene066966:CDS | 45.0% |
| !! | ATAAATAAATAATAAACATT+CGG | - | chr6.4:47819368-47819387 | None:intergenic | 5.0% |
| !!! | GTTTTAAATTTTTTTTTTTT+TGG | + | chr6.4:47817874-47817893 | MS.gene066966:intron | 5.0% |
| AACACCTAACGAAGTGGTCG+GGG | + | chr6.4:47822008-47822027 | MS.gene066966:CDS | 50.0% | |
| AACCAACACTGTCTGCGGTT+CGG | - | chr6.4:47821898-47821917 | None:intergenic | 50.0% | |
| AACCAAGAACGACCCACATG+AGG | - | chr6.4:47817790-47817809 | None:intergenic | 50.0% | |
| AAGCTGATGGAACCAGATCG+TGG | + | chr6.4:47821646-47821665 | MS.gene066966:CDS | 50.0% | |
| ACGGTAGTTAACTACCGCTG+AGG | + | chr6.4:47821272-47821291 | MS.gene066966:intron | 50.0% | |
| ACGGTAGTTAACTACCGCTG+GGG | - | chr6.4:47821291-47821272 | None:intergenic | 50.0% | |
| AGAGCTGAATGAACGGACAG+CGG | - | chr6.4:47817680-47817699 | None:intergenic | 50.0% | |
| ATGATCCTGGGTCTTCTCAG+TGG | + | chr6.4:47822073-47822092 | MS.gene066966:CDS | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr6.4:47820941-47820960 | MS.gene066966:intron | 50.0% | |
| CAACGGTAGTTAACTACCGC+TGG | - | chr6.4:47821289-47821270 | None:intergenic | 50.0% | |
| CAGCAGCAGAGCTGAATGAA+CGG | - | chr6.4:47817687-47817706 | None:intergenic | 50.0% | |
| CCAAAATCTCCACCACGATC+TGG | - | chr6.4:47821661-47821680 | None:intergenic | 50.0% | |
| CGGTAGTTAACTACCGCTGA+GGG | + | chr6.4:47821273-47821292 | MS.gene066966:intron | 50.0% | |
| CTGGTTCCATCAGCTTGTGA+AGG | - | chr6.4:47821642-47821661 | None:intergenic | 50.0% | |
| CTGTGAACCAACACTGTCTG+CGG | - | chr6.4:47821903-47821922 | None:intergenic | 50.0% | |
| GAAGACCCAGGATCATTTGC+AGG | - | chr6.4:47822069-47822088 | None:intergenic | 50.0% | |
| GACGGAGGGAGTAGTAAACT+TGG | + | chr6.4:47820959-47820978 | MS.gene066966:intron | 50.0% | |
| GCAGTTTCGTCCTAGTTCAG+TGG | - | chr6.4:47821856-47821875 | None:intergenic | 50.0% | |
| GCATGTTTGGCCAATTCACC+AGG | + | chr6.4:47821008-47821027 | MS.gene066966:intron | 50.0% | |
| GCGGTAGTTAACTACCGTTG+AGG | + | chr6.4:47820463-47820482 | MS.gene066966:intron | 50.0% | |
| GCGGTAGTTAACTACCGTTG+AGG | - | chr6.4:47820482-47820463 | None:intergenic | 50.0% | |
| GGTTCCATCAGCTTGTGAAG+GGG | - | chr6.4:47821640-47821659 | None:intergenic | 50.0% | |
| GTGAATGTTTGTCGGACACC+AGG | + | chr6.4:47818313-47818332 | MS.gene066966:intron | 50.0% | |
| GTTAACTACCGTTGAGGACC+CGG | + | chr6.4:47820469-47820488 | MS.gene066966:intron | 50.0% | |
| GTTAACTACCGTTGAGGACC+CGG | - | chr6.4:47820488-47820469 | None:intergenic | 50.0% | |
| TAGAACCACTGAGAAGACCC+AGG | - | chr6.4:47822081-47822100 | None:intergenic | 50.0% | |
| TCAACGTGTCAGCTTCGTGT+TGG | - | chr6.4:47818267-47818286 | None:intergenic | 50.0% | |
| TCCACTAGATCCGAATTGGC+TGG | - | chr6.4:47819106-47819125 | None:intergenic | 50.0% | |
| TCCAGCCAATTCGGATCTAG+TGG | + | chr6.4:47819102-47819121 | MS.gene066966:intron | 50.0% | |
| TCGAAGTTCAGTGATGCCTC+AGG | + | chr6.4:47822227-47822246 | MS.gene066966:CDS | 50.0% | |
| TCGAGGGAAGAGGTTGCAAA+TGG | + | chr6.4:47819950-47819969 | MS.gene066966:CDS | 50.0% | |
| TGATGGCAAAAGGGAGGATG+GGG | + | chr6.4:47821118-47821137 | MS.gene066966:intron | 50.0% | |
| TGTTGGGTCGGAATCAGAGA+CGG | - | chr6.4:47817710-47817729 | None:intergenic | 50.0% | |
| TTCCTCATGTGGGTCGTTCT+TGG | + | chr6.4:47817785-47817804 | MS.gene066966:intron | 50.0% | |
| ! | GCTGTCAGACTTGTTCTTCC+TGG | - | chr6.4:47821029-47821048 | None:intergenic | 50.0% |
| ! | TTTCTGGAAGGCCGCAAGAT+CGG | - | chr6.4:47822125-47822144 | None:intergenic | 50.0% |
| !! | CCAGATCGTGGTGGAGATTT+TGG | + | chr6.4:47821658-47821677 | MS.gene066966:CDS | 50.0% |
| !! | CTGCGGTTCGGTTATTTGAG+TGG | - | chr6.4:47821886-47821905 | None:intergenic | 50.0% |
| !! | GATATCACTGGTTCGCTGTC+TGG | - | chr6.4:47821806-47821825 | None:intergenic | 50.0% |
| !! | GGCCAAACATGCTGTTTCTG+AGG | - | chr6.4:47821000-47821019 | None:intergenic | 50.0% |
| !! | TGCTGTTTCTGAGGGTACCA+AGG | - | chr6.4:47820991-47821010 | None:intergenic | 50.0% |
| !! | TGTCAGCGTCGTGTTGGTTT+CGG | - | chr6.4:47818507-47818526 | None:intergenic | 50.0% |
| !! | TGTTGGAGTATCGAGGGAAG+AGG | + | chr6.4:47819940-47819959 | MS.gene066966:CDS | 50.0% |
| AACCGAACCGCAGACAGTGT+TGG | + | chr6.4:47821893-47821912 | MS.gene066966:intron | 55.0% | |
| ACTACCCCGACCACTTCGTT+AGG | - | chr6.4:47822015-47822034 | None:intergenic | 55.0% | |
| AGCGGTAGTTAACTGCTGCC+GGG | + | chr6.4:47821243-47821262 | MS.gene066966:intron | 55.0% | |
| AGCGGTAGTTAACTGCTGCC+GGG | - | chr6.4:47821262-47821243 | None:intergenic | 55.0% | |
| CAGCGGTAGTTAACTGCTGC+CGG | + | chr6.4:47821242-47821261 | MS.gene066966:intron | 55.0% | |
| CAGCGGTAGTTAACTGCTGC+CGG | - | chr6.4:47821261-47821242 | None:intergenic | 55.0% | |
| CCATCAGCTTGTGAAGGGGA+AGG | - | chr6.4:47821636-47821655 | None:intergenic | 55.0% | |
| CCTAGCATTGCCCGATCTTG+CGG | + | chr6.4:47822111-47822130 | MS.gene066966:CDS | 55.0% | |
| CCTTCCCCTTCACAAGCTGA+TGG | + | chr6.4:47821633-47821652 | MS.gene066966:CDS | 55.0% | |
| CGAAGCTGACACGTTGACAC+TGG | + | chr6.4:47818270-47818289 | MS.gene066966:intron | 55.0% | |
| CGGTAGTTAACTACCGCTGG+GGG | - | chr6.4:47820460-47820479 | None:intergenic | 55.0% | |
| CGTTGCTCGTTTACAGGACC+AGG | + | chr6.4:47821975-47821994 | MS.gene066966:intron | 55.0% | |
| CTGATGGAACCAGATCGTGG+TGG | + | chr6.4:47821649-47821668 | MS.gene066966:CDS | 55.0% | |
| GCTTGTGAAGGGGAAGGAAG+TGG | - | chr6.4:47821630-47821649 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr6.4:47820945-47820964 | MS.gene066966:intron | 55.0% | |
| GTTTACTACTCCCTCCGTCC+CGG | - | chr6.4:47820958-47820977 | None:intergenic | 55.0% | |
| TAAAGAGCCTGTCAGCAGCG+AGG | + | chr6.4:47821683-47821702 | MS.gene066966:CDS | 55.0% | |
| TGGTGCGTATCCGTCAAGTG+AGG | + | chr6.4:47819989-47820008 | MS.gene066966:CDS | 55.0% | |
| ! | TAGGTGTTACAGACGGGACC+TGG | - | chr6.4:47821996-47822015 | None:intergenic | 55.0% |
| ! | TCGACTTGTCAGCGTCGTGT+TGG | - | chr6.4:47818513-47818532 | None:intergenic | 55.0% |
| ! | TTCTGGAAGGCCGCAAGATC+GGG | - | chr6.4:47822124-47822143 | None:intergenic | 55.0% |
| !! | CACTGGTTCGCTGTCTGGTT+TGG | - | chr6.4:47821801-47821820 | None:intergenic | 55.0% |
| !! | GTCAGCGTCGTGTTGGTTTC+GGG | - | chr6.4:47818506-47818525 | None:intergenic | 55.0% |
| !! | TCAGCGTCGTGTTGGTTTCG+GGG | - | chr6.4:47818505-47818524 | None:intergenic | 55.0% |
| AACTGCTGCCGGGTCCTCAA+CGG | + | chr6.4:47821253-47821272 | MS.gene066966:intron | 60.0% | |
| AACTGCTGCCGGGTCCTCAA+CGG | - | chr6.4:47821272-47821253 | None:intergenic | 60.0% | |
| ACGGACAGCGGAGCTTATGC+CGG | - | chr6.4:47817668-47817687 | None:intergenic | 60.0% | |
| CCGCAAGATCGGGCAATGCT+AGG | - | chr6.4:47822114-47822133 | None:intergenic | 60.0% | |
| GAAGTGGTCGGGGTAGTTCG+CGG | + | chr6.4:47822018-47822037 | MS.gene066966:CDS | 60.0% | |
| GAGACAACCTCGCTGCTGAC+AGG | - | chr6.4:47821693-47821712 | None:intergenic | 60.0% | |
| GAGCTCCGCAAGGATTCTGG+CGG | - | chr6.4:47817626-47817645 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr6.4:47820944-47820963 | MS.gene066966:intron | 60.0% | |
| AAGGATTCTGGCGGCGGAGG+TGG | - | chr6.4:47817617-47817636 | None:intergenic | 65.0% | |
| AGATACGGCGGAGCTCCGCA+AGG | - | chr6.4:47817636-47817655 | None:intergenic | 65.0% | |
| AGCGGAGCTTATGCCGGTGC+GGG | - | chr6.4:47817662-47817681 | None:intergenic | 65.0% | |
| ATTCTGGCGGCGGAGGTGGA+TGG | - | chr6.4:47817613-47817632 | None:intergenic | 65.0% | |
| CAGCGGAGCTTATGCCGGTG+CGG | - | chr6.4:47817663-47817682 | None:intergenic | 65.0% | |
| CTCCGCAAGGATTCTGGCGG+CGG | - | chr6.4:47817623-47817642 | None:intergenic | 65.0% | |
| CTCCGCCGCCAGAATCCTTG+CGG | + | chr6.4:47817618-47817637 | MS.gene066966:CDS | 65.0% | |
| GCGGAGCTCCGCAAGGATTC+TGG | - | chr6.4:47817629-47817648 | None:intergenic | 65.0% | |
| TGCCGGTGCGGGTGGAGATA+CGG | - | chr6.4:47817651-47817670 | None:intergenic | 65.0% | |
| ! | GAGGATGGGTTCCCCGCAGT+TGG | + | chr6.4:47821559-47821578 | MS.gene066966:CDS | 65.0% |
| CGCAAGGATTCTGGCGGCGG+AGG | - | chr6.4:47817620-47817639 | None:intergenic | 70.0% | |
| CGCCGTATCTCCACCCGCAC+CGG | + | chr6.4:47817646-47817665 | MS.gene066966:CDS | 70.0% | |
| CGGTGCGGGTGGAGATACGG+CGG | - | chr6.4:47817648-47817667 | None:intergenic | 70.0% | |
| GGAGCTTATGCCGGTGCGGG+TGG | - | chr6.4:47817659-47817678 | None:intergenic | 70.0% | |
| CTGGCGGCGGAGGTGGATGG+TGG | - | chr6.4:47817610-47817629 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 47817604 | 47822278 | 47817604 | ID=MS.gene066966 |
| chr6.4 | mRNA | 47817604 | 47822278 | 47817604 | ID=MS.gene066966.t1;Parent=MS.gene066966 |
| chr6.4 | exon | 47817604 | 47817754 | 47817604 | ID=MS.gene066966.t1.exon1;Parent=MS.gene066966.t1 |
| chr6.4 | CDS | 47817604 | 47817754 | 47817604 | ID=cds.MS.gene066966.t1;Parent=MS.gene066966.t1 |
| chr6.4 | exon | 47817907 | 47817992 | 47817907 | ID=MS.gene066966.t1.exon2;Parent=MS.gene066966.t1 |
| chr6.4 | CDS | 47817907 | 47817992 | 47817907 | ID=cds.MS.gene066966.t1;Parent=MS.gene066966.t1 |
| chr6.4 | exon | 47819933 | 47820171 | 47819933 | ID=MS.gene066966.t1.exon3;Parent=MS.gene066966.t1 |
| chr6.4 | CDS | 47819933 | 47820171 | 47819933 | ID=cds.MS.gene066966.t1;Parent=MS.gene066966.t1 |
| chr6.4 | exon | 47821533 | 47821704 | 47821533 | ID=MS.gene066966.t1.exon4;Parent=MS.gene066966.t1 |
| chr6.4 | CDS | 47821533 | 47821704 | 47821533 | ID=cds.MS.gene066966.t1;Parent=MS.gene066966.t1 |
| chr6.4 | exon | 47821991 | 47822278 | 47821991 | ID=MS.gene066966.t1.exon5;Parent=MS.gene066966.t1 |
| chr6.4 | CDS | 47821991 | 47822278 | 47821991 | ID=cds.MS.gene066966.t1;Parent=MS.gene066966.t1 |
| Gene Sequence |
| Protein sequence |
