AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067614

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067614.t1 MTR_4g031150 98.108 740 14 0 1 740 51 790 0.0 1499
MS.gene067614.t1 MTR_7g109150 74.038 624 158 2 1 622 2 623 0.0 907
MS.gene067614.t1 MTR_1g073840 41.711 748 403 18 4 738 29 756 2.61e-175 521
MS.gene067614.t1 MTR_7g116330 39.653 749 411 16 4 733 34 760 7.51e-165 494
MS.gene067614.t1 MTR_1g079790 37.816 751 429 18 2 733 26 757 2.70e-155 469
MS.gene067614.t1 MTR_1g044210 37.332 742 445 12 4 734 28 760 2.79e-151 459
MS.gene067614.t1 MTR_1g079790 38.704 571 328 11 2 560 26 586 3.00e-119 371
MS.gene067614.t1 MTR_3g085130 28.453 362 212 7 334 654 438 793 7.31e-35 143
MS.gene067614.t1 MTR_3g085130 33.884 121 72 3 611 723 903 1023 6.87e-12 69.7
MS.gene067614.t1 MTR_8g080770 29.155 367 215 8 334 662 383 742 9.89e-35 142
MS.gene067614.t1 MTR_8g080770 34.711 121 68 4 613 723 840 959 2.26e-12 71.2
MS.gene067614.t1 MTR_3g085130 28.453 362 212 7 334 654 228 583 1.10e-34 142
MS.gene067614.t1 MTR_3g085130 33.884 121 72 3 611 723 693 813 6.39e-12 69.7
MS.gene067614.t1 MTR_8g080770 29.155 367 215 8 334 662 274 633 1.29e-34 142
MS.gene067614.t1 MTR_8g080770 34.711 121 68 4 613 723 731 850 2.35e-12 71.2
MS.gene067614.t1 MTR_3g105590 30.409 342 176 9 299 599 331 651 1.07e-32 136
MS.gene067614.t1 MTR_5g022470 30.976 297 177 6 333 604 499 792 2.27e-30 129
MS.gene067614.t1 MTR_5g022470 30.976 297 177 6 333 604 499 792 2.29e-30 129
MS.gene067614.t1 MTR_8g075340 31.698 265 158 3 333 574 461 725 2.64e-29 125
MS.gene067614.t1 MTR_5g097410 28.249 354 208 6 337 651 611 957 2.59e-28 122
MS.gene067614.t1 MTR_8g106150 29.235 366 195 8 337 645 377 735 1.64e-27 119
MS.gene067614.t1 MTR_8g106150 29.235 366 195 8 337 645 134 492 2.91e-27 118
MS.gene067614.t1 MTR_1g013360 38.095 147 88 2 347 492 380 524 1.19e-23 107
MS.gene067614.t1 MTR_1g087140 27.483 302 161 7 323 578 373 662 3.32e-18 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067614.t1 AT1G66340 79.595 740 145 3 1 738 1 736 0.0 1204
MS.gene067614.t1 AT2G40940 70.608 592 174 0 1 592 1 592 0.0 848
MS.gene067614.t1 AT3G23150 38.421 760 411 18 4 731 32 766 2.14e-150 457
MS.gene067614.t1 AT3G04580 38.255 745 437 16 3 732 26 762 1.68e-148 452
MS.gene067614.t1 AT3G04580 38.255 745 437 16 3 732 26 762 1.68e-148 452
MS.gene067614.t1 AT3G23150 40.806 571 313 12 4 561 32 590 4.89e-125 386
MS.gene067614.t1 AT1G04310 38.966 503 282 9 4 491 34 526 1.26e-96 313
MS.gene067614.t1 AT1G04310 38.966 503 282 9 4 491 34 526 1.26e-96 313
MS.gene067614.t1 AT5G10720 34.146 287 163 8 322 589 339 618 2.01e-37 150
MS.gene067614.t1 AT1G27320 26.566 463 287 10 305 727 412 861 4.17e-34 140
MS.gene067614.t1 AT5G35750 27.991 443 267 11 334 731 578 1013 1.56e-33 139
MS.gene067614.t1 AT2G17820 30.619 307 186 7 313 597 472 773 1.82e-30 129
MS.gene067614.t1 AT2G01830 28.169 355 205 6 337 645 455 805 2.27e-29 125
MS.gene067614.t1 AT2G01830 28.169 355 205 6 337 645 443 793 2.39e-29 125
MS.gene067614.t1 AT2G01830 28.169 355 205 6 337 645 443 793 2.39e-29 125
MS.gene067614.t1 AT2G01830 28.169 355 205 6 337 645 443 793 2.39e-29 125
MS.gene067614.t1 AT2G01830 28.169 355 205 6 337 645 443 793 2.39e-29 125
MS.gene067614.t1 AT2G01830 28.169 355 205 6 337 645 466 816 3.42e-29 125
MS.gene067614.t1 AT2G47430 28.617 311 178 10 317 591 373 675 3.89e-18 90.1
MS.gene067614.t1 AT4G16250 23.554 242 158 7 329 566 918 1136 1.05e-13 75.9
MS.gene067614.t1 AT2G18790 23.695 249 157 7 325 566 910 1132 4.07e-11 67.4

Find 153 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTCAACTTGTTTGTGTTTC+CGG 0.151506 4.1:+69651688 None:intergenic
TTTGAAAATTAGAAAGATTT+AGG 0.173765 4.1:+69654247 None:intergenic
GGAACACAAAGTGGTCTTTA+TGG 0.205815 4.1:-69651804 MS.gene067614:CDS
AAGGGACTTCTTATCCATTT+AGG 0.238284 4.1:-69651881 MS.gene067614:CDS
CTGGGGCAGTAGTTGCTATT+CGG 0.247378 4.1:-69654278 MS.gene067614:CDS
CAACACATCTAATAAATTTA+TGG 0.259500 4.1:-69654809 MS.gene067614:CDS
TTGGCCTTGCAATTTGTAAA+AGG 0.281289 4.1:-69653031 MS.gene067614:intron
TTGTGACATCGCATCCTAAA+TGG 0.288123 4.1:+69651867 None:intergenic
CTAATATCGCGGAAGGATTC+AGG 0.288662 4.1:+69653317 None:intergenic
CCATGATTTACTAGAGCTTT+TGG 0.296661 4.1:+69652724 None:intergenic
CTGCAGTATTTCCATATAGA+TGG 0.300370 4.1:-69654872 MS.gene067614:CDS
AACCAGAAGTTATGCTTTGA+TGG 0.307492 4.1:-69654202 MS.gene067614:CDS
GTTCTTGTCATGGATGATAA+TGG 0.309504 4.1:-69652676 MS.gene067614:CDS
CAAATTCTTCTCAATGTTGT+TGG 0.312839 4.1:-69653398 MS.gene067614:CDS
CATGGGTCTACAAACATTTC+CGG 0.322490 4.1:-69652706 MS.gene067614:CDS
ATCTCATGGAAGGACATATT+TGG 0.331144 4.1:-69652843 MS.gene067614:CDS
TTCATCTTCTCAACAGAAAC+AGG 0.336907 4.1:+69651620 None:intergenic
TGAACAAGGACCCATCTATA+TGG 0.340257 4.1:+69654861 None:intergenic
AGCTCTCAAACAGTTCTCTT+TGG 0.340716 4.1:+69651667 None:intergenic
TTGATCACAGGAAGATTAAT+AGG 0.343944 4.1:+69654387 None:intergenic
GCAAAACCCTGTTGGATATA+CGG 0.346184 4.1:-69654412 MS.gene067614:CDS
TTGTGGCTCAATACAATTGC+AGG 0.351088 4.1:+69655001 None:intergenic
TACACTCGTCAACGATGTTT+TGG 0.351468 4.1:-69653718 MS.gene067614:CDS
TGCAGTTTCTGCTTCTCTCC+TGG 0.351645 4.1:+69653899 None:intergenic
CGGTAGAACTCTTGGGTTAG+AGG 0.352498 4.1:-69654499 MS.gene067614:CDS
CCACTTATAGTTGCTCTTAC+CGG 0.360015 4.1:-69651707 MS.gene067614:CDS
CTTGGTACTGGTAGGAAATC+AGG 0.368046 4.1:+69653290 None:intergenic
TGAGGTCGTAATCGAGCAAC+TGG 0.368149 4.1:+69654318 None:intergenic
GTCTTTATGGATGTTTGTAC+AGG 0.370740 4.1:-69651791 MS.gene067614:CDS
ATGCCTGTGTGTTGTTTCTC+TGG 0.375221 4.1:-69651825 MS.gene067614:CDS
TAAGGTAGTTTATGTTCATT+TGG 0.378697 4.1:+69652751 None:intergenic
TTATGGATGCCGACACGTAC+TGG 0.379232 4.1:-69654468 MS.gene067614:CDS
AATCCTGTTGGAAGTGGGCT+TGG 0.382064 4.1:-69653050 MS.gene067614:CDS
TGGGGCAGTAGTTGCTATTC+GGG 0.384904 4.1:-69654277 MS.gene067614:CDS
ACAATATAGGTAAAAGATTC+AGG 0.388522 4.1:-69653146 MS.gene067614:intron
ATTCGTACGCAGGAAGAAAC+TGG 0.390104 4.1:-69654603 MS.gene067614:CDS
GTTGAACTCGGTAGAACTCT+TGG 0.392589 4.1:-69654507 MS.gene067614:CDS
AGATGGGTCCTTGTTCAGTT+TGG 0.394532 4.1:-69654855 MS.gene067614:CDS
GAGGGCAAGGGATCAACTTA+TGG 0.395439 4.1:-69653946 MS.gene067614:CDS
TGCGGAGCTTGATAGAGAAA+TGG 0.397903 4.1:-69654631 MS.gene067614:CDS
AAGAAACTGGTCGACATGTT+AGG 0.407386 4.1:-69654590 MS.gene067614:CDS
TTATGTTCATTTGGACGGTC+CGG 0.408158 4.1:+69652760 None:intergenic
GATGTTTGTACAGGGTTAGA+TGG 0.409988 4.1:-69651782 MS.gene067614:CDS
TGCACTCTCTTCATTGATGC+AGG 0.414560 4.1:-69653808 MS.gene067614:CDS
GCAGAATGTTGCACTTGATA+TGG 0.422816 4.1:-69653922 MS.gene067614:CDS
CGGCCTCAAGGTTCTTGTCA+TGG 0.425638 4.1:-69652686 MS.gene067614:CDS
CCAAAAGCTCTAGTAAATCA+TGG 0.426386 4.1:-69652724 MS.gene067614:CDS
TTCTTGTCATGGATGATAAT+GGG 0.431607 4.1:-69652675 MS.gene067614:intron
ATAGGTACCGTATATCCAAC+AGG 0.432791 4.1:+69654405 None:intergenic
CATGCTGCAAAATACATGCC+TGG 0.434848 4.1:-69654297 MS.gene067614:CDS
TTGAACTCGGTAGAACTCTT+GGG 0.435191 4.1:-69654506 MS.gene067614:CDS
GAATAATATGTACAAGCATA+AGG 0.435805 4.1:+69654703 None:intergenic
TAGGTAAAAGATTCAGGATC+AGG 0.440352 4.1:-69653140 MS.gene067614:CDS
GACTGCTGAGCAACGTCTAA+TGG 0.441775 4.1:-69653775 MS.gene067614:CDS
GGTTAGAGGAATGTGCGTTA+TGG 0.446709 4.1:-69654485 MS.gene067614:CDS
CAGAAACAGGTTTCAAAACT+AGG 0.451627 4.1:+69651633 None:intergenic
GGTCGAGGTAGTTGCTGATC+AGG 0.455884 4.1:-69654124 MS.gene067614:intron
GCTGTTAAGTTCACAAAAGA+AGG 0.457297 4.1:-69653371 MS.gene067614:CDS
AACCATCAAAGCATAACTTC+TGG 0.461708 4.1:+69654200 None:intergenic
TATGTTCATTTGGACGGTCC+GGG 0.471284 4.1:+69652761 None:intergenic
TGAAGAAATCTGATATGTAT+TGG 0.476642 4.1:+69654949 None:intergenic
CCTCTCTAAACAATGAATGA+AGG 0.477023 4.1:+69653643 None:intergenic
TGTTTGAGAGCTGGTGTGAA+TGG 0.477087 4.1:-69651656 MS.gene067614:CDS
AGGCCAAGCCCACTTCCAAC+AGG 0.486034 4.1:+69653047 None:intergenic
ATGCTGCAAAATACATGCCT+GGG 0.488762 4.1:-69654296 MS.gene067614:CDS
TTCATCAATAAATCATCTGC+TGG 0.499714 4.1:+69654975 None:intergenic
GCGGAGCTTGATAGAGAAAT+GGG 0.500423 4.1:-69654630 MS.gene067614:CDS
AATAATATGTACAAGCATAA+GGG 0.501867 4.1:+69654704 None:intergenic
TAACTTCTGGTTGAAACCTC+AGG 0.504125 4.1:+69654213 None:intergenic
ATCTATTAAGTGTTAAAACT+AGG 0.508812 4.1:-69654677 MS.gene067614:CDS
GATCTTTCACGGCTTGAAGA+TGG 0.509985 4.1:-69653696 MS.gene067614:CDS
GGTGCCTTCATAGTTCTATG+TGG 0.510808 4.1:-69654834 MS.gene067614:CDS
GGTGAGTAGGTCAGCGACAA+AGG 0.513878 4.1:-69651900 MS.gene067614:CDS
AAATAAAAGTGGCCATCACT+TGG 0.516449 4.1:+69653272 None:intergenic
GTTAGATGGTTATGAATTAG+CGG 0.517611 4.1:-69651768 MS.gene067614:CDS
ATGTTGCACTTGATATGGCC+AGG 0.521689 4.1:-69653917 MS.gene067614:CDS
CATTGTAAAACTCGGAATCC+CGG 0.521822 4.1:-69652779 MS.gene067614:CDS
TCTATTAAGTGTTAAAACTA+GGG 0.523376 4.1:-69654676 MS.gene067614:CDS
ACTTGTAATGCAGGGTGAGT+AGG 0.526253 4.1:-69651913 MS.gene067614:intron
GTAGTTTATGTTCATTTGGA+CGG 0.527033 4.1:+69652755 None:intergenic
TAGAAGAGTCGATGAGGGCA+AGG 0.528388 4.1:-69653959 MS.gene067614:CDS
AAGTGGCCATCACTTGGTAC+TGG 0.531856 4.1:+69653278 None:intergenic
TCATCACCAATCGCATGCAC+CGG 0.532851 4.1:+69653434 None:intergenic
CCGGTAAGAGCAACTATAAG+TGG 0.540920 4.1:+69651707 None:intergenic
CACTGCAGTTAAAACCTTGG+CGG 0.545967 4.1:+69654743 None:intergenic
GTGAGTAGGTCAGCGACAAA+GGG 0.547884 4.1:-69651899 MS.gene067614:CDS
AAATCATCTGCTGGCCATTG+TGG 0.550408 4.1:+69654984 None:intergenic
CAAAAGCTCTAGTAAATCAT+GGG 0.550984 4.1:-69652723 MS.gene067614:CDS
GAAAGCGAAGGTGTTGGTAA+AGG 0.551134 4.1:-69652817 MS.gene067614:CDS
TACAAACATTTCCGGCCTCA+AGG 0.553478 4.1:-69652698 MS.gene067614:CDS
TATGGATGCCGACACGTACT+GGG 0.553493 4.1:-69654467 MS.gene067614:CDS
TGCAGTATTTCCATATAGAT+GGG 0.553503 4.1:-69654871 MS.gene067614:CDS
GCCACTTTCATTGTAAAACT+CGG 0.554108 4.1:-69652787 MS.gene067614:CDS
GAGCAGGTTTGTGAATCTCA+TGG 0.554605 4.1:-69652857 MS.gene067614:intron
CCTGTACTCGCAAATAAAAG+TGG 0.556232 4.1:+69653261 None:intergenic
CCTTCATTCATTGTTTAGAG+AGG 0.557200 4.1:-69653643 MS.gene067614:intron
TGTTTCTCTGGAACACAAAG+TGG 0.561245 4.1:-69651813 MS.gene067614:CDS
AAAGAGAACTGTTTGAGAGC+TGG 0.562595 4.1:-69651665 MS.gene067614:CDS
TACCACTGCAGTTAAAACCT+TGG 0.563298 4.1:+69654740 None:intergenic
ACAAAGTAGATAAGCTCGAG+CGG 0.563726 4.1:+69654903 None:intergenic
CAAACTTAGTGAATAACGTT+GGG 0.564614 4.1:+69653099 None:intergenic
AATAACGTTGGGATGTCTTG+TGG 0.566487 4.1:+69653110 None:intergenic
CGAATAGCAACTACTGCCCC+AGG 0.569883 4.1:+69654279 None:intergenic
GCAAACTTAGTGAATAACGT+TGG 0.573515 4.1:+69653098 None:intergenic
TAACAGAACTCTTGGAGCGT+CGG 0.575513 4.1:-69651589 MS.gene067614:CDS
CTTTACAACAACCACGGCGA+TGG 0.577371 4.1:+69653340 None:intergenic
GATTTGCCGGTGCATGCGAT+TGG 0.577697 4.1:-69653440 MS.gene067614:CDS
TGCTCCACATAGAACTATGA+AGG 0.577986 4.1:+69654830 None:intergenic
TCTTTATGGATGTTTGTACA+GGG 0.580421 4.1:-69651790 MS.gene067614:CDS
TGAAGGCACCAAACTGAACA+AGG 0.580571 4.1:+69654847 None:intergenic
TGCAGTTAAAACCTTGGCGG+TGG 0.581795 4.1:+69654746 None:intergenic
CAAAGTAGATAAGCTCGAGC+GGG 0.583205 4.1:+69654904 None:intergenic
AGGAAATCTAATATCGCGGA+AGG 0.585020 4.1:+69653310 None:intergenic
AAATTAGAAAGATTTAGGAG+AGG 0.591308 4.1:+69654252 None:intergenic
GCATGTACATGAGTTAGAGC+TGG 0.591900 4.1:-69654145 MS.gene067614:CDS
CATGACAAGAACCTTGAGGC+CGG 0.595442 4.1:+69652687 None:intergenic
TGGATCGAAAGCGAAGGTGT+TGG 0.595504 4.1:-69652823 MS.gene067614:CDS
ATGTACAAGCATAAGGGCAG+TGG 0.596476 4.1:+69654710 None:intergenic
TTGAGACAGCAAAACCCTGT+TGG 0.596545 4.1:-69654420 MS.gene067614:CDS
CTAAATACATGATTGATCAC+AGG 0.597914 4.1:+69654375 None:intergenic
GGTTCTTGTATGAATTGTGA+AGG 0.598228 4.1:+69654785 None:intergenic
GATGCCGACACGTACTGGGT+TGG 0.605973 4.1:-69654463 MS.gene067614:CDS
AATTGTAATGACCACCGCCA+AGG 0.606041 4.1:-69654757 MS.gene067614:CDS
AATGGGCTTGATTCGTACGC+AGG 0.607550 4.1:-69654613 MS.gene067614:CDS
CACTGTCTAGCACTATCAGA+TGG 0.612788 4.1:+69654168 None:intergenic
GGTGGTCATTACAATTGCCA+CGG 0.613246 4.1:+69654764 None:intergenic
TTCCTACCAGTACCAAGTGA+TGG 0.619110 4.1:-69653284 MS.gene067614:CDS
AGGTTTGTGAATCTCATGGA+AGG 0.621756 4.1:-69652853 MS.gene067614:CDS
AGAAGAGTCGATGAGGGCAA+GGG 0.622079 4.1:-69653958 MS.gene067614:CDS
GTTTCTGTTGAGAAGATGAA+AGG 0.632532 4.1:-69651617 MS.gene067614:CDS
GCAATTGTATTGAGCCACAA+TGG 0.634157 4.1:-69654998 MS.gene067614:CDS
TGCTGAGCAACGTCTAATGG+TGG 0.634295 4.1:-69653772 MS.gene067614:CDS
AGTGCAATAATTGCATGCAT+CGG 0.638531 4.1:+69653825 None:intergenic
TTCAGGCTTTACAACAACCA+CGG 0.643393 4.1:+69653334 None:intergenic
AGCTCCAACCCAGTACGTGT+CGG 0.649105 4.1:+69654459 None:intergenic
TCAAATATATGATTGGCCTG+AGG 0.650243 4.1:-69654229 MS.gene067614:CDS
AAAACGACTCTTGTTGAACT+CGG 0.650784 4.1:-69654519 MS.gene067614:CDS
CAATCTTAGAAGAGTCGATG+AGG 0.659708 4.1:-69653965 MS.gene067614:CDS
GCGGGATCGAGAAATAAGCA+AGG 0.660212 4.1:+69654922 None:intergenic
AATCAGGAAATCTAATATCG+CGG 0.661209 4.1:+69653306 None:intergenic
ACATGAGTTAGAGCTGGTCG+AGG 0.664742 4.1:-69654139 MS.gene067614:CDS
CGGGATCGAGAAATAAGCAA+GGG 0.666665 4.1:+69654923 None:intergenic
AATCTTAGAAGAGTCGATGA+GGG 0.669206 4.1:-69653964 MS.gene067614:CDS
CATATTTGGATCGAAAGCGA+AGG 0.670915 4.1:-69652829 MS.gene067614:CDS
AGGCAGCATTTCCATCGCCG+TGG 0.671963 4.1:-69653351 MS.gene067614:CDS
GAGGTCGTAATCGAGCAACT+GGG 0.678441 4.1:+69654319 None:intergenic
TGCTGCAAAATACATGCCTG+GGG 0.686693 4.1:-69654295 MS.gene067614:CDS
CACAATTCATACAAGAACCG+TGG 0.691719 4.1:-69654781 MS.gene067614:CDS
GGCCATCACTTGGTACTGGT+AGG 0.695660 4.1:+69653282 None:intergenic
CATCCATGACAAGAACCTTG+AGG 0.710914 4.1:+69652683 None:intergenic
TAGGTACCGTATATCCAACA+GGG 0.717698 4.1:+69654406 None:intergenic
CATCTGATAGTGCTAGACAG+TGG 0.733689 4.1:-69654167 MS.gene067614:CDS
GTTCCAGAGAAACAACACAC+AGG 0.756436 4.1:+69651822 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGTATAAATTTAAACTTTT+AGG - chr4.1:69654449-69654468 MS.gene067614:CDS 10.0%
!! AAATTGTCAAATAAAAATTC+AGG + chr4.1:69654483-69654502 None:intergenic 15.0%
!! TTTGAAAATTAGAAAGATTT+AGG + chr4.1:69652332-69652351 None:intergenic 15.0%
!!! ATTATGTATATTTTCTTTTC+TGG + chr4.1:69654533-69654552 None:intergenic 15.0%
!!! CTAATTTTCAAATATATGAT+TGG - chr4.1:69652340-69652359 MS.gene067614:intron 15.0%
!!! TTTTATAGAAAAGTAAACTT+AGG - chr4.1:69653982-69654001 MS.gene067614:CDS 15.0%
!! AAGTAAATCTATATACATCA+AGG - chr4.1:69654108-69654127 MS.gene067614:intron 20.0%
!! AATAATATGTACAAGCATAA+GGG + chr4.1:69651875-69651894 None:intergenic 20.0%
!! ATCTATTAAGTGTTAAAACT+AGG - chr4.1:69651899-69651918 MS.gene067614:CDS 20.0%
!! ATGCTTTCAAGAATATAATT+AGG + chr4.1:69654042-69654061 None:intergenic 20.0%
!! CAACACATCTAATAAATTTA+TGG - chr4.1:69651767-69651786 MS.gene067614:CDS 20.0%
!! TCTATTAAGTGTTAAAACTA+GGG - chr4.1:69651900-69651919 MS.gene067614:CDS 20.0%
!! TGATGTATATAGATTTACTT+TGG + chr4.1:69654108-69654127 None:intergenic 20.0%
!! TTATTTAAACAGTTAGAACA+CGG + chr4.1:69654249-69654268 None:intergenic 20.0%
!!! AAATTTAAACTTTTAGGTGA+AGG - chr4.1:69654455-69654474 MS.gene067614:CDS 20.0%
!!! ACCAATATAGTTTTCTTTTT+TGG + chr4.1:69652978-69652997 None:intergenic 20.0%
!!! AGTTTTAACACTTAATAGAT+CGG + chr4.1:69651899-69651918 None:intergenic 20.0%
!!! CCAATATAGTTTTCTTTTTT+GGG + chr4.1:69652977-69652996 None:intergenic 20.0%
!!! TAATCTGTTTTCTATTCTTT+CGG - chr4.1:69653604-69653623 MS.gene067614:intron 20.0%
!!! TATTTTGTTTTCCACAATAT+AGG - chr4.1:69653417-69653436 MS.gene067614:CDS 20.0%
!!! TTTTTACAACATTGCTTTTA+GGG + chr4.1:69654164-69654183 None:intergenic 20.0%
! AAATTAGAAAGATTTAGGAG+AGG + chr4.1:69652327-69652346 None:intergenic 25.0%
! ACAATATAGGTAAAAGATTC+AGG - chr4.1:69653430-69653449 MS.gene067614:CDS 25.0%
! ACTAGAAATATTCCTTGATA+TGG + chr4.1:69654433-69654452 None:intergenic 25.0%
! CCCAAAAAAGAAAACTATAT+TGG - chr4.1:69652974-69652993 MS.gene067614:intron 25.0%
! GAATAATATGTACAAGCATA+AGG + chr4.1:69651876-69651895 None:intergenic 25.0%
! TAAGGTAGTTTATGTTCATT+TGG + chr4.1:69653828-69653847 None:intergenic 25.0%
! TGAAGAAATCTGATATGTAT+TGG + chr4.1:69651630-69651649 None:intergenic 25.0%
!! AATACCTTTTACAAATTGCA+AGG + chr4.1:69653552-69653571 None:intergenic 25.0%
!! TAAGTCTTTTCATAGTAAGT+GGG + chr4.1:69654379-69654398 None:intergenic 25.0%
!! TGAATCTTTTACCTATATTG+TGG + chr4.1:69653431-69653450 None:intergenic 25.0%
!! TTACTAACTTTCTTCTGTTT+TGG - chr4.1:69653354-69653373 MS.gene067614:CDS 25.0%
!!! AGTTTTCTTTTTTGGGTTTT+AGG + chr4.1:69652970-69652989 None:intergenic 25.0%
!!! ATATTTGTTATTCTGATTGC+AGG - chr4.1:69653048-69653067 MS.gene067614:CDS 25.0%
!!! GATTTTTTGTTGCTAATGTT+TGG + chr4.1:69653510-69653529 None:intergenic 25.0%
!!! GGAATTATTTTTGAAGAACA+AGG - chr4.1:69651921-69651940 MS.gene067614:intron 25.0%
!!! GTTTTAACACTTAATAGATC+GGG + chr4.1:69651898-69651917 None:intergenic 25.0%
!!! GTTTTTACAACATTGCTTTT+AGG + chr4.1:69654165-69654184 None:intergenic 25.0%
!!! TTTCTTCTATTGATTCCATA+CGG - chr4.1:69653682-69653701 MS.gene067614:CDS 25.0%
AAATTTCACAACTGAAGGTA+CGG + chr4.1:69653945-69653964 None:intergenic 30.0%
AAGTCAGATGAATTGTTTAG+TGG - chr4.1:69654584-69654603 MS.gene067614:CDS 30.0%
AATCAGGAAATCTAATATCG+CGG + chr4.1:69653273-69653292 None:intergenic 30.0%
AATGCTGTTCACAATTTAAC+AGG - chr4.1:69654281-69654300 MS.gene067614:CDS 30.0%
AGGTCCATGTAAAAGAATTT+CGG + chr4.1:69652553-69652572 None:intergenic 30.0%
CAAACTTAGTGAATAACGTT+GGG + chr4.1:69653480-69653499 None:intergenic 30.0%
CAAATTCTTCTCAATGTTGT+TGG - chr4.1:69653178-69653197 MS.gene067614:intron 30.0%
CTAAATACATGATTGATCAC+AGG + chr4.1:69652204-69652223 None:intergenic 30.0%
CTTACTATGAAAAGACTTAC+TGG - chr4.1:69654380-69654399 MS.gene067614:CDS 30.0%
GTAACAAATTTCACAACTGA+AGG + chr4.1:69653950-69653969 None:intergenic 30.0%
GTAGTTTATGTTCATTTGGA+CGG + chr4.1:69653824-69653843 None:intergenic 30.0%
GTTAGATGGTTATGAATTAG+CGG - chr4.1:69654808-69654827 MS.gene067614:CDS 30.0%
TCTTTATGGATGTTTGTACA+GGG - chr4.1:69654786-69654805 MS.gene067614:CDS 30.0%
TGCAGTATTTCCATATAGAT+GGG - chr4.1:69651705-69651724 MS.gene067614:CDS 30.0%
TGTAAAGAAATACGCTACAA+AGG + chr4.1:69652505-69652524 None:intergenic 30.0%
TTAGCAACAAAAAATCCTGT+TGG - chr4.1:69653514-69653533 MS.gene067614:intron 30.0%
TTCATCAATAAATCATCTGC+TGG + chr4.1:69651604-69651623 None:intergenic 30.0%
TTCTATAAAATCACCAGACA+TGG + chr4.1:69653972-69653991 None:intergenic 30.0%
TTCTTGTCATGGATGATAAT+GGG - chr4.1:69653901-69653920 MS.gene067614:CDS 30.0%
TTGATCACAGGAAGATTAAT+AGG + chr4.1:69652192-69652211 None:intergenic 30.0%
! AAGTCTTTTCATAGTAAGTG+GGG + chr4.1:69654378-69654397 None:intergenic 30.0%
! CAAAAGCTCTAGTAAATCAT+GGG - chr4.1:69653853-69653872 MS.gene067614:CDS 30.0%
! CAAGCTTTAATACCATATCA+AGG - chr4.1:69654418-69654437 MS.gene067614:CDS 30.0%
! GTAAGTCTTTTCATAGTAAG+TGG + chr4.1:69654380-69654399 None:intergenic 30.0%
! TTGACCGAAATTCTTTTACA+TGG - chr4.1:69652546-69652565 MS.gene067614:intron 30.0%
AAAACCATAATGTCCCATCA+AGG + chr4.1:69654335-69654354 None:intergenic 35.0%
AAAACGACTCTTGTTGAACT+CGG - chr4.1:69652057-69652076 MS.gene067614:intron 35.0%
AAATAAAAGTGGCCATCACT+TGG + chr4.1:69653307-69653326 None:intergenic 35.0%
AACCAGAAGTTATGCTTTGA+TGG - chr4.1:69652374-69652393 MS.gene067614:intron 35.0%
AACCATCAAAGCATAACTTC+TGG + chr4.1:69652379-69652398 None:intergenic 35.0%
AAGGACTATGAAAAGCAAAC+CGG + chr4.1:69654316-69654335 None:intergenic 35.0%
AAGGGACTTCTTATCCATTT+AGG - chr4.1:69654695-69654714 MS.gene067614:CDS 35.0%
AATCTTAGAAGAGTCGATGA+GGG - chr4.1:69652612-69652631 MS.gene067614:intron 35.0%
ACAAAAAATCCTGTTGGAAG+TGG - chr4.1:69653520-69653539 MS.gene067614:intron 35.0%
ACTATGAAAAGACTTACTGG+TGG - chr4.1:69654383-69654402 MS.gene067614:CDS 35.0%
AGTGCAATAATTGCATGCAT+CGG + chr4.1:69652754-69652773 None:intergenic 35.0%
ATAATTAGGACCCAAGAAGT+CGG + chr4.1:69654028-69654047 None:intergenic 35.0%
ATCAGTTATGACACAAGGAA+GGG + chr4.1:69654637-69654656 None:intergenic 35.0%
ATCTCATGGAAGGACATATT+TGG - chr4.1:69653733-69653752 MS.gene067614:CDS 35.0%
ATGGTGAAACTTGTAATGCA+GGG - chr4.1:69654655-69654674 MS.gene067614:CDS 35.0%
CAAAAAATCCTGTTGGAAGT+GGG - chr4.1:69653521-69653540 MS.gene067614:intron 35.0%
CAGAAACAGGTTTCAAAACT+AGG + chr4.1:69654946-69654965 None:intergenic 35.0%
CCTCTCTAAACAATGAATGA+AGG + chr4.1:69652936-69652955 None:intergenic 35.0%
CCTTCATTCATTGTTTAGAG+AGG - chr4.1:69652933-69652952 MS.gene067614:intron 35.0%
CTGCAGTATTTCCATATAGA+TGG - chr4.1:69651704-69651723 MS.gene067614:CDS 35.0%
GAATTTGCGCTCTTCAATAT+TGG - chr4.1:69653649-69653668 MS.gene067614:CDS 35.0%
GCAAACTTAGTGAATAACGT+TGG + chr4.1:69653481-69653500 None:intergenic 35.0%
GCTGTTAAGTTCACAAAAGA+AGG - chr4.1:69653205-69653224 MS.gene067614:intron 35.0%
GGTTCTTGTATGAATTGTGA+AGG + chr4.1:69651794-69651813 None:intergenic 35.0%
GTCTTTATGGATGTTTGTAC+AGG - chr4.1:69654785-69654804 MS.gene067614:CDS 35.0%
GTTCTTGTCATGGATGATAA+TGG - chr4.1:69653900-69653919 MS.gene067614:CDS 35.0%
GTTTCTGTTGAGAAGATGAA+AGG - chr4.1:69654959-69654978 MS.gene067614:CDS 35.0%
TAGGTAAAAGATTCAGGATC+AGG - chr4.1:69653436-69653455 MS.gene067614:CDS 35.0%
TCTTCATTCAGTCTTCTACT+TGG - chr4.1:69654561-69654580 MS.gene067614:CDS 35.0%
TGCATTAAACCACTCAAACT+GGG - chr4.1:69654217-69654236 MS.gene067614:CDS 35.0%
TTCATCTTCTCAACAGAAAC+AGG + chr4.1:69654959-69654978 None:intergenic 35.0%
! ACATTTTGCATCAGATTTGC+CGG - chr4.1:69653123-69653142 MS.gene067614:CDS 35.0%
! AGCTTTTTAACAGATGCAAC+AGG + chr4.1:69653091-69653110 None:intergenic 35.0%
! CCAAAAGCTCTAGTAAATCA+TGG - chr4.1:69653852-69653871 MS.gene067614:CDS 35.0%
! CCATGATTTACTAGAGCTTT+TGG + chr4.1:69653855-69653874 None:intergenic 35.0%
! GCCACTTTCATTGTAAAACT+CGG - chr4.1:69653789-69653808 MS.gene067614:CDS 35.0%
! TCCGAGTTTTACAATGAAAG+TGG + chr4.1:69653793-69653812 None:intergenic 35.0%
! TGCTTTTCATAGTCCTTGAT+GGG - chr4.1:69654319-69654338 MS.gene067614:CDS 35.0%
!! ACGATGTTTTGGATCTTTCA+CGG - chr4.1:69652869-69652888 MS.gene067614:intron 35.0%
!! ATTTTTGAAGAACAAGGCTG+CGG - chr4.1:69651927-69651946 MS.gene067614:intron 35.0%
!! GTGAAATTTGTTACCATGTC+TGG - chr4.1:69653956-69653975 MS.gene067614:CDS 35.0%
!! TCAAATATATGATTGGCCTG+AGG - chr4.1:69652347-69652366 MS.gene067614:intron 35.0%
!! TTGCTTTTCATAGTCCTTGA+TGG - chr4.1:69654318-69654337 MS.gene067614:CDS 35.0%
!! TTGGCCTTGCAATTTGTAAA+AGG - chr4.1:69653545-69653564 MS.gene067614:intron 35.0%
!!! ACTAGAGCTTTTGGTTTGTA+AGG + chr4.1:69653846-69653865 None:intergenic 35.0%
!!! AGGTGTTTTAACAGAACTCT+TGG - chr4.1:69654979-69654998 MS.gene067614:CDS 35.0%
AAAGACTTACTGGTGGTTGT+TGG - chr4.1:69654390-69654409 MS.gene067614:CDS 40.0%
AAAGAGAACTGTTTGAGAGC+TGG - chr4.1:69654911-69654930 MS.gene067614:CDS 40.0%
AAGAAACTGGTCGACATGTT+AGG - chr4.1:69651986-69652005 MS.gene067614:intron 40.0%
AATAACGTTGGGATGTCTTG+TGG + chr4.1:69653469-69653488 None:intergenic 40.0%
ACAAAGTAGATAAGCTCGAG+CGG + chr4.1:69651676-69651695 None:intergenic 40.0%
ACTGAATCAGAGAGACATCT+TGG - chr4.1:69654183-69654202 MS.gene067614:CDS 40.0%
AGCTCTCAAACAGTTCTCTT+TGG + chr4.1:69654912-69654931 None:intergenic 40.0%
AGGAAATCTAATATCGCGGA+AGG + chr4.1:69653269-69653288 None:intergenic 40.0%
AGGTTTGTGAATCTCATGGA+AGG - chr4.1:69653723-69653742 MS.gene067614:CDS 40.0%
ATGCTGCAAAATACATGCCT+GGG - chr4.1:69652280-69652299 MS.gene067614:intron 40.0%
ATTTAACAGGCTGAACTGTC+CGG - chr4.1:69654294-69654313 MS.gene067614:CDS 40.0%
CAATCTTAGAAGAGTCGATG+AGG - chr4.1:69652611-69652630 MS.gene067614:intron 40.0%
CACAATTCATACAAGAACCG+TGG - chr4.1:69651795-69651814 MS.gene067614:CDS 40.0%
CACGTGTTAAAGATACCGTA+TGG + chr4.1:69653700-69653719 None:intergenic 40.0%
CATATTTGGATCGAAAGCGA+AGG - chr4.1:69653747-69653766 MS.gene067614:CDS 40.0%
CATCAGTTATGACACAAGGA+AGG + chr4.1:69654638-69654657 None:intergenic 40.0%
CATGGGTCTACAAACATTTC+CGG - chr4.1:69653870-69653889 MS.gene067614:CDS 40.0%
CATTGTAAAACTCGGAATCC+CGG - chr4.1:69653797-69653816 MS.gene067614:CDS 40.0%
CCACTTATAGTTGCTCTTAC+CGG - chr4.1:69654869-69654888 MS.gene067614:CDS 40.0%
CCTGTACTCGCAAATAAAAG+TGG + chr4.1:69653318-69653337 None:intergenic 40.0%
CGTCTGTTATCTGATTTCGA+AGG - chr4.1:69653387-69653406 MS.gene067614:CDS 40.0%
CTGCATTAAACCACTCAAAC+TGG - chr4.1:69654216-69654235 MS.gene067614:CDS 40.0%
CTGTTATCTGATTTCGAAGG+TGG - chr4.1:69653390-69653409 MS.gene067614:CDS 40.0%
CTTCCTTGTGTCATAACTGA+TGG - chr4.1:69654636-69654655 MS.gene067614:CDS 40.0%
GATGGTGAAACTTGTAATGC+AGG - chr4.1:69654654-69654673 MS.gene067614:CDS 40.0%
GATGTTTGTACAGGGTTAGA+TGG - chr4.1:69654794-69654813 MS.gene067614:CDS 40.0%
GCAAAACCCTGTTGGATATA+CGG - chr4.1:69652164-69652183 MS.gene067614:intron 40.0%
GCAATTGTATTGAGCCACAA+TGG - chr4.1:69651578-69651597 MS.gene067614:CDS 40.0%
GCAGAATGTTGCACTTGATA+TGG - chr4.1:69652654-69652673 MS.gene067614:intron 40.0%
GGAACACAAAGTGGTCTTTA+TGG - chr4.1:69654772-69654791 MS.gene067614:CDS 40.0%
TAATTAGGACCCAAGAAGTC+GGG + chr4.1:69654027-69654046 None:intergenic 40.0%
TACCACTGCAGTTAAAACCT+TGG + chr4.1:69651839-69651858 None:intergenic 40.0%
TAGTCCTTGATGGGACATTA+TGG - chr4.1:69654328-69654347 MS.gene067614:CDS 40.0%
TCACCATCAGTTATGACACA+AGG + chr4.1:69654642-69654661 None:intergenic 40.0%
TGAACAAGGACCCATCTATA+TGG + chr4.1:69651718-69651737 None:intergenic 40.0%
TGCTCCACATAGAACTATGA+AGG + chr4.1:69651749-69651768 None:intergenic 40.0%
TTATGTTCATTTGGACGGTC+CGG + chr4.1:69653819-69653838 None:intergenic 40.0%
TTCAGGCTTTACAACAACCA+CGG + chr4.1:69653245-69653264 None:intergenic 40.0%
TTGAACTCGGTAGAACTCTT+GGG - chr4.1:69652070-69652089 MS.gene067614:intron 40.0%
TTGTGACATCGCATCCTAAA+TGG + chr4.1:69654712-69654731 None:intergenic 40.0%
TTGTGGCTCAATACAATTGC+AGG + chr4.1:69651578-69651597 None:intergenic 40.0%
! ATAGGTACCGTATATCCAAC+AGG + chr4.1:69652174-69652193 None:intergenic 40.0%
! GGTCAACTTGTTTGTGTTTC+CGG + chr4.1:69654891-69654910 None:intergenic 40.0%
! TAACTTCTGGTTGAAACCTC+AGG + chr4.1:69652366-69652385 None:intergenic 40.0%
! TACACTCGTCAACGATGTTT+TGG - chr4.1:69652858-69652877 MS.gene067614:intron 40.0%
! TAGGTACCGTATATCCAACA+GGG + chr4.1:69652173-69652192 None:intergenic 40.0%
! TCATGCTCGCAATGACTTTT+TGG - chr4.1:69652702-69652721 MS.gene067614:CDS 40.0%
!! CCACTTTTATTTGCGAGTAC+AGG - chr4.1:69653315-69653334 MS.gene067614:CDS 40.0%
!! TGTTTCTCTGGAACACAAAG+TGG - chr4.1:69654763-69654782 MS.gene067614:CDS 40.0%
AAATCATCTGCTGGCCATTG+TGG + chr4.1:69651595-69651614 None:intergenic 45.0%
AATTAGGACCCAAGAAGTCG+GGG + chr4.1:69654026-69654045 None:intergenic 45.0%
AATTGTAATGACCACCGCCA+AGG - chr4.1:69651819-69651838 MS.gene067614:CDS 45.0%
ACTTGTAATGCAGGGTGAGT+AGG - chr4.1:69654663-69654682 MS.gene067614:CDS 45.0%
AGATGGGTCCTTGTTCAGTT+TGG - chr4.1:69651721-69651740 MS.gene067614:CDS 45.0%
ATGTACAAGCATAAGGGCAG+TGG + chr4.1:69651869-69651888 None:intergenic 45.0%
ATGTTGCACTTGATATGGCC+AGG - chr4.1:69652659-69652678 MS.gene067614:intron 45.0%
ATTCGTACGCAGGAAGAAAC+TGG - chr4.1:69651973-69651992 MS.gene067614:intron 45.0%
CAAAGTAGATAAGCTCGAGC+GGG + chr4.1:69651675-69651694 None:intergenic 45.0%
CACTGCAGTTAAAACCTTGG+CGG + chr4.1:69651836-69651855 None:intergenic 45.0%
CACTGTCTAGCACTATCAGA+TGG + chr4.1:69652411-69652430 None:intergenic 45.0%
CAGCTACCTGGTGTAAAAAC+AGG + chr4.1:69652573-69652592 None:intergenic 45.0%
CATCCATGACAAGAACCTTG+AGG + chr4.1:69653896-69653915 None:intergenic 45.0%
CATGCTGCAAAATACATGCC+TGG - chr4.1:69652279-69652298 MS.gene067614:intron 45.0%
CCGGTAAGAGCAACTATAAG+TGG + chr4.1:69654872-69654891 None:intergenic 45.0%
CGGGATCGAGAAATAAGCAA+GGG + chr4.1:69651656-69651675 None:intergenic 45.0%
CTAATATCGCGGAAGGATTC+AGG + chr4.1:69653262-69653281 None:intergenic 45.0%
GAGCAGGTTTGTGAATCTCA+TGG - chr4.1:69653719-69653738 MS.gene067614:CDS 45.0%
GATCTTTCACGGCTTGAAGA+TGG - chr4.1:69652880-69652899 MS.gene067614:intron 45.0%
GCATGTACATGAGTTAGAGC+TGG - chr4.1:69652431-69652450 MS.gene067614:intron 45.0%
GCGGAGCTTGATAGAGAAAT+GGG - chr4.1:69651946-69651965 MS.gene067614:intron 45.0%
GGTATCTTTAACACGTGAGC+AGG - chr4.1:69653703-69653722 MS.gene067614:CDS 45.0%
GGTGGTCATTACAATTGCCA+CGG + chr4.1:69651815-69651834 None:intergenic 45.0%
GGTTAGAGGAATGTGCGTTA+TGG - chr4.1:69652091-69652110 MS.gene067614:intron 45.0%
GTTCCAGAGAAACAACACAC+AGG + chr4.1:69654757-69654776 None:intergenic 45.0%
GTTGAACTCGGTAGAACTCT+TGG - chr4.1:69652069-69652088 MS.gene067614:intron 45.0%
TAACAGAACTCTTGGAGCGT+CGG - chr4.1:69654987-69655006 MS.gene067614:CDS 45.0%
TACAAACATTTCCGGCCTCA+AGG - chr4.1:69653878-69653897 MS.gene067614:CDS 45.0%
TATGTTCATTTGGACGGTCC+GGG + chr4.1:69653818-69653837 None:intergenic 45.0%
TCAGAGAGACATCTTGGTCA+TGG - chr4.1:69654189-69654208 MS.gene067614:CDS 45.0%
TGCACTCTCTTCATTGATGC+AGG - chr4.1:69652768-69652787 MS.gene067614:CDS 45.0%
TGCGGAGCTTGATAGAGAAA+TGG - chr4.1:69651945-69651964 MS.gene067614:intron 45.0%
TGCTGCAAAATACATGCCTG+GGG - chr4.1:69652281-69652300 MS.gene067614:intron 45.0%
TGTTTGAGAGCTGGTGTGAA+TGG - chr4.1:69654920-69654939 MS.gene067614:CDS 45.0%
TTCCTACCAGTACCAAGTGA+TGG - chr4.1:69653292-69653311 MS.gene067614:CDS 45.0%
TTGAGACAGCAAAACCCTGT+TGG - chr4.1:69652156-69652175 MS.gene067614:intron 45.0%
! CATCTGATAGTGCTAGACAG+TGG - chr4.1:69652409-69652428 MS.gene067614:intron 45.0%
! GGCATGTATTTTGCAGCATG+AGG + chr4.1:69652279-69652298 None:intergenic 45.0%
! GGTGCCTTCATAGTTCTATG+TGG - chr4.1:69651742-69651761 MS.gene067614:CDS 45.0%
!! ATGCCTGTGTGTTGTTTCTC+TGG - chr4.1:69654751-69654770 MS.gene067614:CDS 45.0%
!! CTTGGTACTGGTAGGAAATC+AGG + chr4.1:69653289-69653308 None:intergenic 45.0%
!! GAAAGCGAAGGTGTTGGTAA+AGG - chr4.1:69653759-69653778 MS.gene067614:CDS 45.0%
!! TGAAGGCACCAAACTGAACA+AGG + chr4.1:69651732-69651751 None:intergenic 45.0%
!!! CATGGACCTGTTTTTACACC+AGG - chr4.1:69652564-69652583 MS.gene067614:intron 45.0%
AAGTGGCCATCACTTGGTAC+TGG + chr4.1:69653301-69653320 None:intergenic 50.0%
ACATGAGTTAGAGCTGGTCG+AGG - chr4.1:69652437-69652456 MS.gene067614:intron 50.0%
ACTTTACGCCCCGACTTCTT+GGG - chr4.1:69654015-69654034 MS.gene067614:intron 50.0%
AGAAGAGTCGATGAGGGCAA+GGG - chr4.1:69652618-69652637 MS.gene067614:intron 50.0%
CATGACAAGAACCTTGAGGC+CGG + chr4.1:69653892-69653911 None:intergenic 50.0%
CTTTACAACAACCACGGCGA+TGG + chr4.1:69653239-69653258 None:intergenic 50.0%
GACTGCTGAGCAACGTCTAA+TGG - chr4.1:69652801-69652820 MS.gene067614:CDS 50.0%
GAGAAAGAGCAACAGCTACC+TGG + chr4.1:69652585-69652604 None:intergenic 50.0%
GAGGGCAAGGGATCAACTTA+TGG - chr4.1:69652630-69652649 MS.gene067614:intron 50.0%
GAGGTCGTAATCGAGCAACT+GGG + chr4.1:69652260-69652279 None:intergenic 50.0%
GCGGGATCGAGAAATAAGCA+AGG + chr4.1:69651657-69651676 None:intergenic 50.0%
GTGAGTAGGTCAGCGACAAA+GGG - chr4.1:69654677-69654696 MS.gene067614:CDS 50.0%
TACTTTACGCCCCGACTTCT+TGG - chr4.1:69654014-69654033 MS.gene067614:intron 50.0%
TAGAAGAGTCGATGAGGGCA+AGG - chr4.1:69652617-69652636 MS.gene067614:intron 50.0%
TATGGATGCCGACACGTACT+GGG - chr4.1:69652109-69652128 MS.gene067614:intron 50.0%
TCATCACCAATCGCATGCAC+CGG + chr4.1:69653145-69653164 None:intergenic 50.0%
TGAGGTCGTAATCGAGCAAC+TGG + chr4.1:69652261-69652280 None:intergenic 50.0%
TGCAGTTAAAACCTTGGCGG+TGG + chr4.1:69651833-69651852 None:intergenic 50.0%
TGCAGTTTCTGCTTCTCTCC+TGG + chr4.1:69652680-69652699 None:intergenic 50.0%
TGCTGAGCAACGTCTAATGG+TGG - chr4.1:69652804-69652823 MS.gene067614:CDS 50.0%
TTATGGATGCCGACACGTAC+TGG - chr4.1:69652108-69652127 MS.gene067614:intron 50.0%
! AATCCTGTTGGAAGTGGGCT+TGG - chr4.1:69653526-69653545 MS.gene067614:intron 50.0%
! AATGGGCTTGATTCGTACGC+AGG - chr4.1:69651963-69651982 MS.gene067614:intron 50.0%
! CGGTAGAACTCTTGGGTTAG+AGG - chr4.1:69652077-69652096 MS.gene067614:intron 50.0%
! CTGGGGCAGTAGTTGCTATT+CGG - chr4.1:69652298-69652317 MS.gene067614:intron 50.0%
! TGGATCGAAAGCGAAGGTGT+TGG - chr4.1:69653753-69653772 MS.gene067614:CDS 50.0%
! TGGGGCAGTAGTTGCTATTC+GGG - chr4.1:69652299-69652318 MS.gene067614:intron 50.0%
!! CGGTTTTGTCCCAGTTTGAG+TGG + chr4.1:69654229-69654248 None:intergenic 50.0%
!!! CGCCAAGGTTTTAACTGCAG+TGG - chr4.1:69651834-69651853 MS.gene067614:CDS 50.0%
AGCTCCAACCCAGTACGTGT+CGG + chr4.1:69652120-69652139 None:intergenic 55.0%
CGAATAGCAACTACTGCCCC+AGG + chr4.1:69652300-69652319 None:intergenic 55.0%
CGGCCTCAAGGTTCTTGTCA+TGG - chr4.1:69653890-69653909 MS.gene067614:CDS 55.0%
GATTTGCCGGTGCATGCGAT+TGG - chr4.1:69653136-69653155 MS.gene067614:CDS 55.0%
GGTCGAGGTAGTTGCTGATC+AGG - chr4.1:69652452-69652471 MS.gene067614:intron 55.0%
GGTGAGTAGGTCAGCGACAA+AGG - chr4.1:69654676-69654695 MS.gene067614:CDS 55.0%
!! GGCCATCACTTGGTACTGGT+AGG + chr4.1:69653297-69653316 None:intergenic 55.0%
AGGCAGCATTTCCATCGCCG+TGG - chr4.1:69653225-69653244 MS.gene067614:intron 60.0%
AGGCCAAGCCCACTTCCAAC+AGG + chr4.1:69653532-69653551 None:intergenic 60.0%
GATGCCGACACGTACTGGGT+TGG - chr4.1:69652113-69652132 MS.gene067614:intron 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 69651568 69655030 69651568 ID=MS.gene067614
chr4.1 mRNA 69651568 69655030 69651568 ID=MS.gene067614.t1;Parent=MS.gene067614
chr4.1 exon 69654125 69655030 69654125 ID=MS.gene067614.t1.exon1;Parent=MS.gene067614.t1
chr4.1 CDS 69654125 69655030 69654125 ID=cds.MS.gene067614.t1;Parent=MS.gene067614.t1
chr4.1 exon 69653644 69654012 69653644 ID=MS.gene067614.t1.exon2;Parent=MS.gene067614.t1
chr4.1 CDS 69653644 69654012 69653644 ID=cds.MS.gene067614.t1;Parent=MS.gene067614.t1
chr4.1 exon 69653262 69653528 69653262 ID=MS.gene067614.t1.exon3;Parent=MS.gene067614.t1
chr4.1 CDS 69653262 69653528 69653262 ID=cds.MS.gene067614.t1;Parent=MS.gene067614.t1
chr4.1 exon 69653032 69653159 69653032 ID=MS.gene067614.t1.exon4;Parent=MS.gene067614.t1
chr4.1 CDS 69653032 69653159 69653032 ID=cds.MS.gene067614.t1;Parent=MS.gene067614.t1
chr4.1 exon 69652676 69652873 69652676 ID=MS.gene067614.t1.exon5;Parent=MS.gene067614.t1
chr4.1 CDS 69652676 69652873 69652676 ID=cds.MS.gene067614.t1;Parent=MS.gene067614.t1
chr4.1 exon 69651568 69651922 69651568 ID=MS.gene067614.t1.exon6;Parent=MS.gene067614.t1
chr4.1 CDS 69651568 69651922 69651568 ID=cds.MS.gene067614.t1;Parent=MS.gene067614.t1
Gene Sequence

>MS.gene067614

ATGGAATCCTGCAATTGTATTGAGCCACAATGGCCAGCAGATGATTTATTGATGAAATACCAATACATATCAGATTTCTTCATCGCCCTTGCTTATTTCTCGATCCCGCTCGAGCTTATCTACTTTGTTAAGAAATCTGCAGTATTTCCATATAGATGGGTCCTTGTTCAGTTTGGTGCCTTCATAGTTCTATGTGGAGCAACACATCTAATAAATTTATGGACCTTCACAATTCATACAAGAACCGTGGCAATTGTAATGACCACCGCCAAGGTTTTAACTGCAGTGGTATCGTGTGCCACTGCCCTTATGCTTGTACATATTATTCCCGATCTATTAAGTGTTAAAACTAGGGAATTATTTTTGAAGAACAAGGCTGCGGAGCTTGATAGAGAAATGGGCTTGATTCGTACGCAGGAAGAAACTGGTCGACATGTTAGGATGTTGACTCATGAGATTAGAAGTACTCTTGATAGACATACAATACTGAAAACGACTCTTGTTGAACTCGGTAGAACTCTTGGGTTAGAGGAATGTGCGTTATGGATGCCGACACGTACTGGGTTGGAGCTTCAACTTTCTTACACATTGAGACAGCAAAACCCTGTTGGATATACGGTACCTATTAATCTTCCTGTGATCAATCATGTATTTAGTAGCAATCGTGCAGTTAAAATTTCATCGAATTGCCCAGTTGCTCGATTACGACCTCATGCTGCAAAATACATGCCTGGGGCAGTAGTTGCTATTCGGGTTCCTCTCCTAAATCTTTCTAATTTTCAAATATATGATTGGCCTGAGGTTTCAACCAGAAGTTATGCTTTGATGGTTTTGATGCTTCCATCTGATAGTGCTAGACAGTGGCATGTACATGAGTTAGAGCTGGTCGAGGTAGTTGCTGATCAGGTTAGTAATTCGCTGTTTTATTCAGTTTCCTTTGTAGCGTATTTCTTTACATGTTGTTTGCTTCACTTTTATTTGACCGAAATTCTTTTACATGGACCTGTTTTTACACCAGGTAGCTGTTGCTCTTTCTCATGCTGCAATCTTAGAAGAGTCGATGAGGGCAAGGGATCAACTTATGGAGCAGAATGTTGCACTTGATATGGCCAGGAGAGAAGCAGAAACTGCAATTCATGCTCGCAATGACTTTTTGGCTGTTATGAATCACGAGATGAGAACTCCGATGCATGCAATTATTGCACTCTCTTCATTGATGCAGGAAACAGATCTGACTGCTGAGCAACGTCTAATGGTGGAAACAATACTGAAAAGCAGCAATTTATTAGCTACACTCGTCAACGATGTTTTGGATCTTTCACGGCTTGAAGATGGCAGTTTTCAACTTGAAATATCAACATTTAACCTTCATTCATTGTTTAGAGAGGTAAAATTTTCGCCTAAAACCCAAAAAAGAAAACTATATTGGTCTGACTAGTAGCTTATGATCTTTGAGTTTTTTCAAAAGCTTGATGTTGTTATATTTGTTATTCTGATTGCAGGTCATTAACTTGATTAAACCTGTTGCATCTGTTAAAAAGCTGTCACTCACTTTACATTTTGCATCAGATTTGCCGGTGCATGCGATTGGTGATGAAAAGCGTCTCATGCAAATTCTTCTCAATGTTGTTGGCAATGCTGTTAAGTTCACAAAAGAAGGCAGCATTTCCATCGCCGTGGTTGTTGTAAAGCCTGAATCCTTCCGCGATATTAGATTTCCTGATTTCCTACCAGTACCAAGTGATGGCCACTTTTATTTGCGAGTACAGGTTTGTTTCGTCAAGCTTTACTAACTTTCTTCTGTTTTGGTATATTGTATCGTCTGTTATCTGATTTCGAAGGTGGAATATATTTTGTTTTCCACAATATAGGTAAAAGATTCAGGATCAGGAATCAATCCACAAGACATCCCAACGTTATTCACTAAGTTTGCACAAAACCAAACATTAGCAACAAAAAATCCTGTTGGAAGTGGGCTTGGCCTTGCAATTTGTAAAAGGTATTAAATTCTTGTATAGTTACTGATATGAACATGCTAATCTGTTTTCTATTCTTTCGGATATAGTATATTTACAAAATTAGAATTTGCGCTCTTCAATATTGGTATTTATGATTTTCTTCTATTGATTCCATACGGTATCTTTAACACGTGAGCAGGTTTGTGAATCTCATGGAAGGACATATTTGGATCGAAAGCGAAGGTGTTGGTAAAGGATGTACAGCCACTTTCATTGTAAAACTCGGAATCCCGGACCGTCCAAATGAACATAAACTACCTTACAAACCAAAAGCTCTAGTAAATCATGGGTCTACAAACATTTCCGGCCTCAAGGTTCTTGTCATGGATGATAATGGGTCAGTAACAGCTTTATTTCCGTACCTTCAGTTGTGAAATTTGTTACCATGTCTGGTGATTTTATAGAAAAGTAAACTTAGGTTGACTTCTTACTTTACGCCCCGACTTCTTGGGTCCTAATTATATTCTTGAAAGCATGATAATACTTTTGTGCTGAATGCTCATATTGCTTACTACTAGTCCAAAGTAAATCTATATACATCAAGGTTTAGCTGCTAAACTTTTTTAATTTACACTCCCTAAAAGCAATGTTGTAAAAACTGAATCAGAGAGACATCTTGGTCATGGTTCACTGCATTAAACCACTCAAACTGGGACAAAACCGTGTTCTAACTGTTTAAATAACTGAACGTAGAGAATGCTGTTCACAATTTAACAGGCTGAACTGTCCGGTTTGCTTTTCATAGTCCTTGATGGGACATTATGGTTTTAGTTTGATCGATGTAGTTGACCCCACTTACTATGAAAAGACTTACTGGTGGTTGTTGGTGTAACAAGCTTTAATACCATATCAAGGAATATTTCTAGTATAAATTTAAACTTTTAGGTGAAGGTACCTGAATTTTTATTTGACAATTTGTATGTTCATTGACACTCACTTTATAGCCAGAAAAGAAAATATACATAATGCATGCAGTCTTCATTCAGTCTTCTACTTGGAAGTCAGATGAATTGTTTAGTGGCTGATGCATTTGCTACGTTTACTCTTTCCCTTCCTTGTGTCATAACTGATGGTGAAACTTGTAATGCAGGGTGAGTAGGTCAGCGACAAAGGGACTTCTTATCCATTTAGGATGCGATGTCACAACTGTTAGCTCAAGCGAAGAATGCCTGTGTGTTGTTTCTCTGGAACACAAAGTGGTCTTTATGGATGTTTGTACAGGGTTAGATGGTTATGAATTAGCGGTTCGTATACAAGAGAAGTTCACAAAACGTCAAGATAGACCACTTATAGTTGCTCTTACCGGAAACACAAACAAGTTGACCAAAGAGAACTGTTTGAGAGCTGGTGTGAATGGCCTAGTTTTGAAACCTGTTTCTGTTGAGAAGATGAAAGGTGTTTTAACAGAACTCTTGGAGCGTCGGTTTGTGTTTGAAACAATTTAA
Protein sequence

>MS.gene067614.t1

MESCNCIEPQWPADDLLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFTIHTRTVAIVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPTRTGLELQLSYTLRQQNPVGYTVPINLPVINHVFSSNRAVKISSNCPVARLRPHAAKYMPGAVVAIRVPLLNLSNFQIYDWPEVSTRSYALMVLMLPSDSARQWHVHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDMARREAETAIHARNDFLAVMNHEMRTPMHAIIALSSLMQETDLTAEQRLMVETILKSSNLLATLVNDVLDLSRLEDGSFQLEISTFNLHSLFREVINLIKPVASVKKLSLTLHFASDLPVHAIGDEKRLMQILLNVVGNAVKFTKEGSISIAVVVVKPESFRDIRFPDFLPVPSDGHFYLRVQVKDSGSGINPQDIPTLFTKFAQNQTLATKNPVGSGLGLAICKRFVNLMEGHIWIESEGVGKGCTATFIVKLGIPDRPNEHKLPYKPKALVNHGSTNISGLKVLVMDDNGVSRSATKGLLIHLGCDVTTVSSSEECLCVVSLEHKVVFMDVCTGLDGYELAVRIQEKFTKRQDRPLIVALTGNTNKLTKENCLRAGVNGLVLKPVSVEKMKGVLTELLERRFVFETI