Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068265.t1 | XP_024637533.1 | 97.4 | 540 | 11 | 1 | 1 | 537 | 1 | 540 | 9.90E-293 | 1015.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068265.t1 | Q9CA89 | 63.9 | 552 | 147 | 12 | 1 | 537 | 1 | 515 | 1.3e-176 | 620.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068265.t1 | A0A396I1E5 | 97.4 | 540 | 11 | 1 | 1 | 537 | 1 | 540 | 7.1e-293 | 1015.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene068265 | MS.gene61338 | PPI |
| MS.gene068265 | MS.gene043004 | PPI |
| MS.gene068265 | MS.gene059632 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068265.t1 | MTR_2g101830 | 75.229 | 545 | 115 | 7 | 1 | 537 | 1 | 533 | 0.0 | 815 |
| MS.gene068265.t1 | MTR_4g013165 | 97.750 | 400 | 6 | 1 | 141 | 537 | 1 | 400 | 0.0 | 809 |
| MS.gene068265.t1 | MTR_6g087700 | 57.194 | 563 | 201 | 14 | 1 | 537 | 1 | 549 | 0.0 | 585 |
| MS.gene068265.t1 | MTR_7g065220 | 50.704 | 426 | 178 | 6 | 75 | 469 | 167 | 591 | 4.76e-145 | 432 |
| MS.gene068265.t1 | MTR_4g075640 | 56.164 | 365 | 138 | 6 | 88 | 431 | 85 | 448 | 2.92e-140 | 417 |
| MS.gene068265.t1 | MTR_4g019770 | 52.732 | 366 | 153 | 4 | 90 | 436 | 96 | 460 | 1.49e-134 | 401 |
| MS.gene068265.t1 | MTR_3g069590 | 49.869 | 383 | 161 | 6 | 88 | 440 | 98 | 479 | 1.35e-132 | 398 |
| MS.gene068265.t1 | MTR_5g081410 | 51.359 | 368 | 155 | 5 | 92 | 436 | 84 | 450 | 3.68e-129 | 389 |
| MS.gene068265.t1 | MTR_8g030850 | 48.942 | 378 | 164 | 5 | 87 | 436 | 94 | 470 | 6.21e-126 | 377 |
| MS.gene068265.t1 | MTR_3g069590 | 50.448 | 335 | 142 | 5 | 88 | 399 | 98 | 431 | 1.81e-116 | 351 |
| MS.gene068265.t1 | MTR_7g077690 | 44.258 | 418 | 161 | 6 | 90 | 436 | 113 | 529 | 2.84e-114 | 349 |
| MS.gene068265.t1 | MTR_5g025960 | 45.352 | 355 | 180 | 5 | 90 | 431 | 118 | 471 | 8.78e-103 | 320 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068265.t1 | AT1G79860 | 65.328 | 548 | 146 | 14 | 1 | 537 | 1 | 515 | 0.0 | 661 |
| MS.gene068265.t1 | AT1G52240 | 60.469 | 554 | 190 | 9 | 1 | 537 | 1 | 542 | 0.0 | 622 |
| MS.gene068265.t1 | AT3G24620 | 56.216 | 555 | 193 | 12 | 1 | 537 | 1 | 523 | 0.0 | 573 |
| MS.gene068265.t1 | AT4G13240 | 54.851 | 536 | 194 | 8 | 17 | 537 | 15 | 517 | 0.0 | 565 |
| MS.gene068265.t1 | AT3G16130 | 50.543 | 552 | 238 | 9 | 1 | 535 | 1 | 534 | 2.65e-176 | 508 |
| MS.gene068265.t1 | AT5G19560 | 55.675 | 467 | 191 | 5 | 80 | 537 | 34 | 493 | 5.53e-174 | 500 |
| MS.gene068265.t1 | AT5G19560 | 55.675 | 467 | 191 | 5 | 80 | 537 | 34 | 493 | 5.53e-174 | 500 |
| MS.gene068265.t1 | AT5G19560 | 55.675 | 467 | 191 | 5 | 80 | 537 | 53 | 512 | 1.37e-173 | 500 |
| MS.gene068265.t1 | AT5G19560 | 55.309 | 405 | 148 | 7 | 1 | 399 | 1 | 378 | 3.22e-146 | 425 |
| MS.gene068265.t1 | AT5G02010 | 52.033 | 369 | 156 | 5 | 88 | 436 | 68 | 435 | 4.08e-138 | 411 |
| MS.gene068265.t1 | AT4G38430 | 53.552 | 366 | 147 | 6 | 88 | 431 | 88 | 452 | 2.21e-134 | 401 |
| MS.gene068265.t1 | AT5G19560 | 54.645 | 366 | 150 | 5 | 181 | 537 | 5 | 363 | 6.17e-128 | 378 |
| MS.gene068265.t1 | AT5G05940 | 49.868 | 379 | 164 | 5 | 82 | 435 | 94 | 471 | 6.81e-128 | 387 |
| MS.gene068265.t1 | AT3G55660 | 50.693 | 361 | 155 | 5 | 90 | 428 | 107 | 466 | 1.65e-125 | 379 |
| MS.gene068265.t1 | AT4G00460 | 50.137 | 365 | 157 | 6 | 90 | 431 | 104 | 466 | 4.50e-125 | 375 |
| MS.gene068265.t1 | AT4G00460 | 50.137 | 365 | 157 | 6 | 90 | 431 | 104 | 466 | 4.50e-125 | 375 |
| MS.gene068265.t1 | AT1G01700 | 48.352 | 364 | 165 | 4 | 90 | 431 | 116 | 478 | 6.00e-120 | 362 |
| MS.gene068265.t1 | AT2G45890 | 47.185 | 373 | 166 | 6 | 90 | 436 | 93 | 460 | 1.95e-118 | 357 |
| MS.gene068265.t1 | AT1G01700 | 44.670 | 394 | 165 | 5 | 90 | 431 | 116 | 508 | 1.48e-113 | 347 |
| MS.gene068265.t1 | AT5G05940 | 48.077 | 364 | 163 | 5 | 61 | 399 | 73 | 435 | 4.59e-113 | 345 |
| MS.gene068265.t1 | AT3G55660 | 49.699 | 332 | 144 | 5 | 90 | 399 | 107 | 437 | 1.05e-111 | 339 |
| MS.gene068265.t1 | AT4G00460 | 47.130 | 331 | 150 | 6 | 124 | 431 | 5 | 333 | 1.64e-103 | 315 |
| MS.gene068265.t1 | AT1G01700 | 45.748 | 341 | 155 | 5 | 90 | 401 | 116 | 455 | 1.28e-100 | 311 |
| MS.gene068265.t1 | AT1G31650 | 41.688 | 391 | 199 | 8 | 90 | 464 | 108 | 485 | 5.94e-99 | 310 |
| MS.gene068265.t1 | AT1G31650 | 41.688 | 391 | 199 | 8 | 90 | 464 | 136 | 513 | 1.37e-98 | 310 |
| MS.gene068265.t1 | AT4G00460 | 52.074 | 217 | 89 | 3 | 90 | 292 | 104 | 319 | 1.38e-73 | 237 |
| MS.gene068265.t1 | AT1G01700 | 49.309 | 217 | 95 | 2 | 90 | 292 | 116 | 331 | 1.20e-69 | 228 |
| MS.gene068265.t1 | AT1G01700 | 49.309 | 217 | 95 | 2 | 90 | 292 | 116 | 331 | 1.20e-69 | 228 |
Find 110 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCATCTTGCTTTCCTTTC+CGG | 0.078322 | 4.4:+87272228 | None:intergenic |
| TAGCTTCTCTTTGGCTTCTT+TGG | 0.168978 | 4.4:+87272918 | None:intergenic |
| ACCCTTTCAGAATCATTTAA+AGG | 0.183778 | 4.4:+87272982 | None:intergenic |
| TGAAAGCTATTCAAGAATAT+TGG | 0.237962 | 4.4:-87270485 | MS.gene068265:CDS |
| TCCTCTGAAATTGAATAGTT+TGG | 0.241404 | 4.4:+87273116 | None:intergenic |
| AAACCTTCTGCAGGTACTTT+AGG | 0.242838 | 4.4:+87271535 | None:intergenic |
| CACTTGTCTGGCTTTGGAAC+TGG | 0.249997 | 4.4:+87270361 | None:intergenic |
| GTCACTATGGGTTGAAGTTT+TGG | 0.251808 | 4.4:+87270175 | None:intergenic |
| CGCTTTCTTATCAGTCACTA+TGG | 0.271679 | 4.4:+87270162 | None:intergenic |
| GAGATTTGCTAAACTACTAT+TGG | 0.292387 | 4.4:-87272518 | MS.gene068265:CDS |
| CTCTTGAAACATCGGTTTCC+CGG | 0.303473 | 4.4:-87270778 | MS.gene068265:CDS |
| TTTCGCTGTTTCAGATGATT+TGG | 0.310878 | 4.4:-87270224 | MS.gene068265:CDS |
| AGGGATTCAATATAGCTTTC+AGG | 0.311443 | 4.4:+87271406 | None:intergenic |
| CTTGGAGTTGGACACTTGTC+TGG | 0.318966 | 4.4:+87270349 | None:intergenic |
| AGCAGAACCCCATGCTGATT+TGG | 0.319621 | 4.4:+87270855 | None:intergenic |
| GTTGGACACTTGTCTGGCTT+TGG | 0.325094 | 4.4:+87270355 | None:intergenic |
| CGGACTTCCACAATCTTCAT+TGG | 0.333257 | 4.4:-87270758 | MS.gene068265:CDS |
| AGAAATTGATTGGCTTCTTT+CGG | 0.336102 | 4.4:-87272202 | MS.gene068265:CDS |
| ATATTCTTACCCGGTTGAAT+TGG | 0.342935 | 4.4:+87270722 | None:intergenic |
| ACCTTGTAATAGCTTCTCTT+TGG | 0.346571 | 4.4:+87272909 | None:intergenic |
| AGATTTGCTAAACTACTATT+GGG | 0.358169 | 4.4:-87272517 | MS.gene068265:CDS |
| CTGCTTCTTCTTCCTTGAGT+TGG | 0.362852 | 4.4:+87270394 | None:intergenic |
| GATGACACTATCGGATTTCA+TGG | 0.363592 | 4.4:-87270290 | MS.gene068265:CDS |
| GATGGAGAAAAGAAATTGAT+TGG | 0.363929 | 4.4:-87272212 | MS.gene068265:CDS |
| CACCGATTACGTTGTTGAAA+TGG | 0.368043 | 4.4:-87272178 | MS.gene068265:CDS |
| TTGAGGCATCAATAGTGATT+TGG | 0.369420 | 4.4:-87270903 | MS.gene068265:CDS |
| AAAAGGTGTTTCTTCAGCTT+TGG | 0.377971 | 4.4:-87272473 | MS.gene068265:CDS |
| AACCATTTCAACAACGTAAT+CGG | 0.380996 | 4.4:+87272176 | None:intergenic |
| TTTCCGGTGGCATTGGCTCT+AGG | 0.384702 | 4.4:+87272244 | None:intergenic |
| AAGCTGAATCGTTCATTAGA+AGG | 0.387113 | 4.4:-87270252 | MS.gene068265:CDS |
| AAAATTCATCAGTAATATTC+CGG | 0.388198 | 4.4:+87270998 | None:intergenic |
| TCCTTGGATTTCTGCTGTGT+TGG | 0.392723 | 4.4:+87272153 | None:intergenic |
| ATGGGGTTCTGCTGTGAGTT+TGG | 0.395399 | 4.4:-87270845 | MS.gene068265:CDS |
| CTCCATGGTTGAACCATCCT+TGG | 0.395990 | 4.4:+87272137 | None:intergenic |
| TAAGCAAAATCCAATTCAAC+CGG | 0.402717 | 4.4:-87270732 | MS.gene068265:CDS |
| GCTTTCCTTTCCGGTGGCAT+TGG | 0.405690 | 4.4:+87272237 | None:intergenic |
| TGCACAAACTCTATCAGAAA+TGG | 0.412815 | 4.4:-87271434 | MS.gene068265:CDS |
| GCGTCCTACGTTGAAAATAT+AGG | 0.413983 | 4.4:-87270142 | MS.gene068265:CDS |
| TATTTATTATGGCAGGATGT+AGG | 0.423799 | 4.4:-87270520 | MS.gene068265:intron |
| AGAGGAATGTTTGAGAATAC+AGG | 0.429946 | 4.4:-87273099 | MS.gene068265:CDS |
| CAATGAAGATTGTGGAAGTC+CGG | 0.433059 | 4.4:+87270759 | None:intergenic |
| ATTTATTATGGCAGGATGTA+GGG | 0.436823 | 4.4:-87270519 | MS.gene068265:intron |
| AATGCATTAACAAATCTTGC+TGG | 0.438177 | 4.4:-87272442 | MS.gene068265:intron |
| TCACTTCTGTCTACATCTCT+TGG | 0.450269 | 4.4:+87270331 | None:intergenic |
| GTATCAAGCTTTCTCAAGGC+AGG | 0.451607 | 4.4:+87271984 | None:intergenic |
| GATATGTCTGGTGGAGGAAA+AGG | 0.452382 | 4.4:-87272490 | MS.gene068265:CDS |
| TTCGATCCCGATCAGTTCCT+AGG | 0.458208 | 4.4:-87270976 | MS.gene068265:CDS |
| CCTTGACTTCTTGATGAAGC+AGG | 0.459530 | 4.4:+87273012 | None:intergenic |
| ACCTTTAAATGATTCTGAAA+GGG | 0.465239 | 4.4:-87272983 | MS.gene068265:CDS |
| TAGAGCTATAGAACAAGAAC+AGG | 0.472666 | 4.4:-87273151 | MS.gene068265:CDS |
| TTCAGAAATGGAACAGATGA+AGG | 0.477101 | 4.4:-87272542 | MS.gene068265:intron |
| AACCTTTAAATGATTCTGAA+AGG | 0.479697 | 4.4:-87272984 | MS.gene068265:CDS |
| CACTATCGGATTTCATGGGT+TGG | 0.504092 | 4.4:-87270285 | MS.gene068265:CDS |
| ATGTTTCAAGAGAAGTAAGA+TGG | 0.504617 | 4.4:+87270789 | None:intergenic |
| CTTATATCCAATGAAGATTG+TGG | 0.506045 | 4.4:+87270751 | None:intergenic |
| CTGTCTACATCTCTTGGAGT+TGG | 0.509157 | 4.4:+87270337 | None:intergenic |
| AATAATCAATGGCGTGATGT+TGG | 0.515072 | 4.4:+87270106 | None:intergenic |
| AGGCATCAATAGTGATTTGG+AGG | 0.517145 | 4.4:-87270900 | MS.gene068265:CDS |
| TGACAAATCAAGAACAATCA+AGG | 0.524014 | 4.4:-87272953 | MS.gene068265:CDS |
| TTTGTGTTTGGCTATCTGCA+TGG | 0.524875 | 4.4:+87270419 | None:intergenic |
| TACTCTTGATAGCACTGTAA+AGG | 0.525700 | 4.4:+87270453 | None:intergenic |
| AATGAAGATTGTGGAAGTCC+GGG | 0.535167 | 4.4:+87270760 | None:intergenic |
| GCTTTCTTATCAGTCACTAT+GGG | 0.535643 | 4.4:+87270163 | None:intergenic |
| AAAGATGCTGATGATCCAAA+AGG | 0.536136 | 4.4:-87271589 | MS.gene068265:CDS |
| AAAAGATTCCAAATCAGCAT+GGG | 0.538216 | 4.4:-87270863 | MS.gene068265:CDS |
| GCGCCTAGAGCCAATGCCAC+CGG | 0.540190 | 4.4:-87272247 | MS.gene068265:CDS |
| TCGATCCCGATCAGTTCCTA+GGG | 0.545956 | 4.4:-87270975 | MS.gene068265:CDS |
| ATACATAGTAGAATTCACTT+TGG | 0.548661 | 4.4:+87271614 | None:intergenic |
| AGCTGAATCGTTCATTAGAA+GGG | 0.550005 | 4.4:-87270251 | MS.gene068265:CDS |
| TGATCTCAAGAATAGAATTG+AGG | 0.555196 | 4.4:-87270920 | MS.gene068265:CDS |
| ATTGTCCCTAGGAACTGATC+GGG | 0.557717 | 4.4:+87270970 | None:intergenic |
| TCCAAACTATTCAATTTCAG+AGG | 0.558140 | 4.4:-87273117 | MS.gene068265:CDS |
| GTCTAGGAGACATAATCTAC+CGG | 0.562132 | 4.4:-87271017 | MS.gene068265:CDS |
| GCAGGATCATCCTCAGAAGT+AGG | 0.564555 | 4.4:+87273030 | None:intergenic |
| ATGACACTATCGGATTTCAT+GGG | 0.566800 | 4.4:-87270289 | MS.gene068265:CDS |
| TCAAGTACTTAAAGCAGCAA+TGG | 0.567209 | 4.4:-87271464 | MS.gene068265:CDS |
| GGGGAAGATATGTCTGGTGG+AGG | 0.568650 | 4.4:-87272496 | MS.gene068265:CDS |
| TATTGTCCCTAGGAACTGAT+CGG | 0.570239 | 4.4:+87270969 | None:intergenic |
| ATGACATGTCTATTGTCCCT+AGG | 0.570387 | 4.4:+87270959 | None:intergenic |
| CATCTTGCTTTCCTTTCCGG+TGG | 0.571860 | 4.4:+87272231 | None:intergenic |
| CACCGGAAAGGAAAGCAAGA+TGG | 0.574325 | 4.4:-87272230 | MS.gene068265:CDS |
| GCCAAAGAGAAGCTATTACA+AGG | 0.575015 | 4.4:-87272910 | MS.gene068265:intron |
| TCTTACTTCTCTTGAAACAT+CGG | 0.576704 | 4.4:-87270786 | MS.gene068265:CDS |
| GCTTCAGATAAACCTTCTGC+AGG | 0.580248 | 4.4:+87271526 | None:intergenic |
| CAGAATGGAAGAGCAAGTCT+AGG | 0.580694 | 4.4:-87271033 | MS.gene068265:CDS |
| CATTGTATCAAGCTTTCTCA+AGG | 0.582888 | 4.4:+87271980 | None:intergenic |
| CTATATTGAATCCCTACCTA+AGG | 0.582995 | 4.4:-87271398 | MS.gene068265:intron |
| CCTGCTTCATCAAGAAGTCA+AGG | 0.585571 | 4.4:-87273012 | MS.gene068265:CDS |
| GATTTGCTAAACTACTATTG+GGG | 0.587710 | 4.4:-87272516 | MS.gene068265:CDS |
| CACATTAGATCCTACTTCTG+AGG | 0.588799 | 4.4:-87273040 | MS.gene068265:CDS |
| TATCAAGCTTTCTCAAGGCA+GGG | 0.597091 | 4.4:+87271985 | None:intergenic |
| TAGAGCCAATGCCACCGGAA+AGG | 0.597760 | 4.4:-87272242 | MS.gene068265:CDS |
| CATCAATAGTGATTTGGAGG+AGG | 0.609738 | 4.4:-87270897 | MS.gene068265:CDS |
| TCCTACGTTGAAAATATAGG+AGG | 0.610840 | 4.4:-87270139 | MS.gene068265:CDS |
| TCTGCAGGTACTTTAGGTGT+AGG | 0.611224 | 4.4:+87271541 | None:intergenic |
| TCAAGGCAGGGATGTTCATG+TGG | 0.611859 | 4.4:+87271997 | None:intergenic |
| CAAACACAAAATCCAACTCA+AGG | 0.612714 | 4.4:-87270406 | MS.gene068265:CDS |
| TCCGATAGTGTCATCGAACA+AGG | 0.615667 | 4.4:+87270298 | None:intergenic |
| ACCTTGTTCGATGACACTAT+CGG | 0.617580 | 4.4:-87270299 | MS.gene068265:CDS |
| ATCCAAGGATGGTTCAACCA+TGG | 0.634394 | 4.4:-87272139 | MS.gene068265:CDS |
| ACACCTAAAGTACCTGCAGA+AGG | 0.643111 | 4.4:-87271538 | MS.gene068265:CDS |
| TCCAACACAGCAGAAATCCA+AGG | 0.654054 | 4.4:-87272154 | MS.gene068265:CDS |
| ATTTGCTAAACTACTATTGG+GGG | 0.655936 | 4.4:-87272515 | MS.gene068265:CDS |
| ACACAGCAGAAATCCAAGGA+TGG | 0.657465 | 4.4:-87272150 | MS.gene068265:CDS |
| AAATCATCTGAAACAGCGAA+AGG | 0.660205 | 4.4:+87270226 | None:intergenic |
| AAGCAAAATCCAATTCAACC+GGG | 0.681075 | 4.4:-87270731 | MS.gene068265:intron |
| CAAGGATGGTTCAACCATGG+AGG | 0.685494 | 4.4:-87272136 | MS.gene068265:intron |
| AAAGATTCCAAATCAGCATG+GGG | 0.687868 | 4.4:-87270862 | MS.gene068265:CDS |
| AGATGTAGACAGAAGTGACG+CGG | 0.707081 | 4.4:-87270326 | MS.gene068265:CDS |
| CAAATCAAGAACAATCAAGG+AGG | 0.708483 | 4.4:-87272950 | MS.gene068265:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATATAACAAGTATTAT+CGG | - | chr4.4:87272643-87272662 | MS.gene068265:intron | 10.0% |
| !!! | TCTATAAATTTTGATATTTA+TGG | - | chr4.4:87270692-87270711 | MS.gene068265:intron | 10.0% |
| !! | CTAACAAGTATTATTTATTA+TGG | - | chr4.4:87272736-87272755 | MS.gene068265:intron | 15.0% |
| !! | TAAATATGATCATTATATGT+TGG | - | chr4.4:87271337-87271356 | MS.gene068265:intron | 15.0% |
| !! | TGAAAGAAAACAAAAATTTA+AGG | + | chr4.4:87272207-87272226 | None:intergenic | 15.0% |
| !!! | ATTTCAATATACATTCTTTT+TGG | - | chr4.4:87270403-87270422 | MS.gene068265:CDS | 15.0% |
| !!! | TAAATTTTGATATTTATGGT+TGG | - | chr4.4:87270696-87270715 | MS.gene068265:intron | 15.0% |
| !!! | TTTTGTTTGTGTTTATTAAT+AGG | - | chr4.4:87272687-87272706 | MS.gene068265:intron | 15.0% |
| !! | AAAATTCATCAGTAATATTC+CGG | + | chr4.4:87272272-87272291 | None:intergenic | 20.0% |
| !! | AATAAAGATTAACATGCATA+AGG | - | chr4.4:87270621-87270640 | MS.gene068265:intron | 20.0% |
| !! | ATAAAGATTAACATGCATAA+GGG | - | chr4.4:87270622-87270641 | MS.gene068265:intron | 20.0% |
| !! | ATAATGATCATATTTAACTC+AGG | + | chr4.4:87271333-87271352 | None:intergenic | 20.0% |
| !!! | ACAAAAACTGTAAGTTTTAT+AGG | - | chr4.4:87271521-87271540 | MS.gene068265:CDS | 20.0% |
| !!! | ATCAATTTCATGCATTTTAT+TGG | - | chr4.4:87270660-87270679 | MS.gene068265:intron | 20.0% |
| !!! | GCTTATTTTAGTTTATCTAT+TGG | - | chr4.4:87271925-87271944 | MS.gene068265:intron | 20.0% |
| !!! | TCAATTTCATGCATTTTATT+GGG | - | chr4.4:87270661-87270680 | MS.gene068265:intron | 20.0% |
| !!! | TTAATCCTGATTTGTTATAT+AGG | - | chr4.4:87271557-87271576 | MS.gene068265:CDS | 20.0% |
| !!! | TTTGTTATATAGGATTCAAT+TGG | - | chr4.4:87271567-87271586 | MS.gene068265:CDS | 20.0% |
| ! | AACCTTTAAATGATTCTGAA+AGG | - | chr4.4:87270283-87270302 | MS.gene068265:CDS | 25.0% |
| ! | AATGTGATGAACTAAACATA+TGG | + | chr4.4:87271183-87271202 | None:intergenic | 25.0% |
| ! | ATAAACACAAACAAAAAGTG+CGG | + | chr4.4:87272683-87272702 | None:intergenic | 25.0% |
| ! | ATACATAGTAGAATTCACTT+TGG | + | chr4.4:87271656-87271675 | None:intergenic | 25.0% |
| ! | ATGTGATGAACTAAACATAT+GGG | + | chr4.4:87271182-87271201 | None:intergenic | 25.0% |
| ! | CAAGTATTATTTATTATGGC+AGG | - | chr4.4:87272740-87272759 | MS.gene068265:intron | 25.0% |
| ! | TAAAGATTAACATGCATAAG+GGG | - | chr4.4:87270623-87270642 | MS.gene068265:intron | 25.0% |
| ! | TGAAAGCTATTCAAGAATAT+TGG | - | chr4.4:87272782-87272801 | MS.gene068265:intron | 25.0% |
| ! | TGAATCCTATATAACAAATC+AGG | + | chr4.4:87271565-87271584 | None:intergenic | 25.0% |
| !! | ACCTTTAAATGATTCTGAAA+GGG | - | chr4.4:87270284-87270303 | MS.gene068265:CDS | 25.0% |
| !! | TCTATACTTCTGAATTTTGA+TGG | - | chr4.4:87270895-87270914 | MS.gene068265:CDS | 25.0% |
| !! | TTTGAAACATTTCCTGAAAA+TGG | + | chr4.4:87270943-87270962 | None:intergenic | 25.0% |
| !!! | AGATTTGCTAAACTACTATT+GGG | - | chr4.4:87270750-87270769 | MS.gene068265:CDS | 25.0% |
| !!! | TTAATTTGTTTGTACAACCA+GGG | - | chr4.4:87272120-87272139 | MS.gene068265:intron | 25.0% |
| !!! | TTGTCATCATTTTTTCCTTT+TGG | + | chr4.4:87271696-87271715 | None:intergenic | 25.0% |
| AAAAAGATTCCAAATCAGCA+TGG | - | chr4.4:87272403-87272422 | MS.gene068265:intron | 30.0% | |
| AAAAGATTCCAAATCAGCAT+GGG | - | chr4.4:87272404-87272423 | MS.gene068265:intron | 30.0% | |
| AAACATTTCCTGAAAATGGA+AGG | + | chr4.4:87270939-87270958 | None:intergenic | 30.0% | |
| AACCATTTCAACAACGTAAT+CGG | + | chr4.4:87271094-87271113 | None:intergenic | 30.0% | |
| AAGGAAAAAATGATGACAAG+TGG | - | chr4.4:87271697-87271716 | MS.gene068265:intron | 30.0% | |
| AATGCATTAACAAATCTTGC+TGG | - | chr4.4:87270825-87270844 | MS.gene068265:CDS | 30.0% | |
| ACCCTTTCAGAATCATTTAA+AGG | + | chr4.4:87270288-87270307 | None:intergenic | 30.0% | |
| AGGCGATTGAAATTCATTTA+CGG | - | chr4.4:87270471-87270490 | MS.gene068265:CDS | 30.0% | |
| ATAGCTTCTAAGCAAATACA+AGG | + | chr4.4:87272148-87272167 | None:intergenic | 30.0% | |
| ATGTTTCAAGAGAAGTAAGA+TGG | + | chr4.4:87272481-87272500 | None:intergenic | 30.0% | |
| ATTTATTATGGCAGGATGTA+GGG | - | chr4.4:87272748-87272767 | MS.gene068265:intron | 30.0% | |
| CAGGGACTAAAAACAAAATT+CGG | + | chr4.4:87271394-87271413 | None:intergenic | 30.0% | |
| CTTATATCCAATGAAGATTG+TGG | + | chr4.4:87272519-87272538 | None:intergenic | 30.0% | |
| GATGGAGAAAAGAAATTGAT+TGG | - | chr4.4:87271055-87271074 | MS.gene068265:intron | 30.0% | |
| GGTTGGATTAAATTCAGAAA+TGG | - | chr4.4:87270713-87270732 | MS.gene068265:intron | 30.0% | |
| TAAGCAAAATCCAATTCAAC+CGG | - | chr4.4:87272535-87272554 | MS.gene068265:CDS | 30.0% | |
| TATTTATTATGGCAGGATGT+AGG | - | chr4.4:87272747-87272766 | MS.gene068265:intron | 30.0% | |
| TATTTGCTTAGAAGCTATGT+TGG | - | chr4.4:87272150-87272169 | MS.gene068265:CDS | 30.0% | |
| TCCAAACTATTCAATTTCAG+AGG | - | chr4.4:87270150-87270169 | MS.gene068265:CDS | 30.0% | |
| TCTTACTTCTCTTGAAACAT+CGG | - | chr4.4:87272481-87272500 | MS.gene068265:CDS | 30.0% | |
| TGACAAATCAAGAACAATCA+AGG | - | chr4.4:87270314-87270333 | MS.gene068265:CDS | 30.0% | |
| TGATCTCAAGAATAGAATTG+AGG | - | chr4.4:87272347-87272366 | MS.gene068265:intron | 30.0% | |
| TGTGATGAACTAAACATATG+GGG | + | chr4.4:87271181-87271200 | None:intergenic | 30.0% | |
| TTCCCTTAACCATTTCATTA+GGG | + | chr4.4:87270550-87270569 | None:intergenic | 30.0% | |
| TTCTTTCATCATTCACAGAA+TGG | - | chr4.4:87272219-87272238 | MS.gene068265:CDS | 30.0% | |
| TTTCCCTTAACCATTTCATT+AGG | + | chr4.4:87270551-87270570 | None:intergenic | 30.0% | |
| ! | ACTTGTTAGAACAGAAAATC+CGG | + | chr4.4:87272725-87272744 | None:intergenic | 30.0% |
| ! | ATTTGCTAAACTACTATTGG+GGG | - | chr4.4:87270752-87270771 | MS.gene068265:CDS | 30.0% |
| ! | CACAATGTTGCATAAACTTT+TGG | - | chr4.4:87272596-87272615 | MS.gene068265:intron | 30.0% |
| ! | GTTTCTGTTTTACATACCTT+AGG | + | chr4.4:87271888-87271907 | None:intergenic | 30.0% |
| ! | TAATAGGTTTTCTTAAGAGC+CGG | - | chr4.4:87272703-87272722 | MS.gene068265:intron | 30.0% |
| ! | TGCTTTATTATCTTAGCTCA+AGG | + | chr4.4:87270870-87270889 | None:intergenic | 30.0% |
| ! | TGTTTTACATACCTTAGGTA+GGG | + | chr4.4:87271883-87271902 | None:intergenic | 30.0% |
| ! | TTATGATGATGATGATGATC+AGG | - | chr4.4:87271608-87271627 | MS.gene068265:CDS | 30.0% |
| !! | AGAAATTGATTGGCTTCTTT+CGG | - | chr4.4:87271065-87271084 | MS.gene068265:intron | 30.0% |
| !! | CTTAATTTGTTTGTACAACC+AGG | - | chr4.4:87272119-87272138 | MS.gene068265:intron | 30.0% |
| !! | GAGATTTGCTAAACTACTAT+TGG | - | chr4.4:87270749-87270768 | MS.gene068265:CDS | 30.0% |
| !! | GATTTGCTAAACTACTATTG+GGG | - | chr4.4:87270751-87270770 | MS.gene068265:CDS | 30.0% |
| !! | TCCTCTGAAATTGAATAGTT+TGG | + | chr4.4:87270154-87270173 | None:intergenic | 30.0% |
| !! | TGTGCAATTTTGTAACTTGT+GGG | + | chr4.4:87271432-87271451 | None:intergenic | 30.0% |
| !!! | ATGCTGATTTGGAATCTTTT+TGG | + | chr4.4:87272404-87272423 | None:intergenic | 30.0% |
| AAAGATGCTGATGATCCAAA+AGG | - | chr4.4:87271678-87271697 | MS.gene068265:intron | 35.0% | |
| AAAGATTCCAAATCAGCATG+GGG | - | chr4.4:87272405-87272424 | MS.gene068265:intron | 35.0% | |
| AAGCAAAATCCAATTCAACC+GGG | - | chr4.4:87272536-87272555 | MS.gene068265:CDS | 35.0% | |
| AAGCTGAATCGTTCATTAGA+AGG | - | chr4.4:87273015-87273034 | MS.gene068265:CDS | 35.0% | |
| ACAAGTATTATCGGAGATGT+AGG | - | chr4.4:87272652-87272671 | MS.gene068265:intron | 35.0% | |
| ACCCCTAATGAAATGGTTAA+GGG | - | chr4.4:87270545-87270564 | MS.gene068265:intron | 35.0% | |
| ACCTTGTAATAGCTTCTCTT+TGG | + | chr4.4:87270361-87270380 | None:intergenic | 35.0% | |
| AGAGGAATGTTTGAGAATAC+AGG | - | chr4.4:87270168-87270187 | MS.gene068265:CDS | 35.0% | |
| AGCTCATTAAAGCAACTCAT+AGG | - | chr4.4:87272020-87272039 | MS.gene068265:CDS | 35.0% | |
| AGCTGAATCGTTCATTAGAA+GGG | - | chr4.4:87273016-87273035 | MS.gene068265:CDS | 35.0% | |
| AGGGATTCAATATAGCTTTC+AGG | + | chr4.4:87271864-87271883 | None:intergenic | 35.0% | |
| ATACAGGACATATTCTTACC+CGG | + | chr4.4:87272557-87272576 | None:intergenic | 35.0% | |
| ATATTCTTACCCGGTTGAAT+TGG | + | chr4.4:87272548-87272567 | None:intergenic | 35.0% | |
| ATGACACTATCGGATTTCAT+GGG | - | chr4.4:87272978-87272997 | MS.gene068265:CDS | 35.0% | |
| CAAACACAAAATCCAACTCA+AGG | - | chr4.4:87272861-87272880 | MS.gene068265:intron | 35.0% | |
| CAAATCAAGAACAATCAAGG+AGG | - | chr4.4:87270317-87270336 | MS.gene068265:CDS | 35.0% | |
| CATTGTATCAAGCTTTCTCA+AGG | + | chr4.4:87271290-87271309 | None:intergenic | 35.0% | |
| CTATATTGAATCCCTACCTA+AGG | - | chr4.4:87271869-87271888 | MS.gene068265:intron | 35.0% | |
| GAAAAAATGATGACAAGTGG+TGG | - | chr4.4:87271700-87271719 | MS.gene068265:intron | 35.0% | |
| GCTTTCTTATCAGTCACTAT+GGG | + | chr4.4:87273107-87273126 | None:intergenic | 35.0% | |
| TAGAGCTATAGAACAAGAAC+AGG | - | chr4.4:87270116-87270135 | MS.gene068265:CDS | 35.0% | |
| TCAAGTACTTAAAGCAGCAA+TGG | - | chr4.4:87271803-87271822 | MS.gene068265:intron | 35.0% | |
| TCCCTTAACCATTTCATTAG+GGG | + | chr4.4:87270549-87270568 | None:intergenic | 35.0% | |
| TCCTACGTTGAAAATATAGG+AGG | - | chr4.4:87273128-87273147 | MS.gene068265:CDS | 35.0% | |
| TGCACAAACTCTATCAGAAA+TGG | - | chr4.4:87271833-87271852 | MS.gene068265:intron | 35.0% | |
| TTCAGAAATGGAACAGATGA+AGG | - | chr4.4:87270725-87270744 | MS.gene068265:intron | 35.0% | |
| ! | AAATCATCTGAAACAGCGAA+AGG | + | chr4.4:87273044-87273063 | None:intergenic | 35.0% |
| ! | ACCTCCTATATTTTCAACGT+AGG | + | chr4.4:87273132-87273151 | None:intergenic | 35.0% |
| ! | ATGGCGTTTTGTGGTTTTTA+CGG | - | chr4.4:87271471-87271490 | MS.gene068265:CDS | 35.0% |
| ! | CTGTTTTACATACCTTAGGT+AGG | + | chr4.4:87271884-87271903 | None:intergenic | 35.0% |
| ! | GTGTGCAATTTTGTAACTTG+TGG | + | chr4.4:87271433-87271452 | None:intergenic | 35.0% |
| ! | TACTCTTGATAGCACTGTAA+AGG | + | chr4.4:87272817-87272836 | None:intergenic | 35.0% |
| ! | TTAACATGCATAAGGGGTTT+TGG | - | chr4.4:87270629-87270648 | MS.gene068265:intron | 35.0% |
| ! | TTGAGGCATCAATAGTGATT+TGG | - | chr4.4:87272364-87272383 | MS.gene068265:intron | 35.0% |
| ! | TTTCGCTGTTTCAGATGATT+TGG | - | chr4.4:87273043-87273062 | MS.gene068265:CDS | 35.0% |
| !! | AAAAGGTGTTTCTTCAGCTT+TGG | - | chr4.4:87270794-87270813 | MS.gene068265:CDS | 35.0% |
| !!! | ATTAATGCAGCTGCTGTTTT+CGG | - | chr4.4:87270988-87271007 | MS.gene068265:CDS | 35.0% |
| !!! | CTTGAGTTGGATTTTGTGTT+TGG | + | chr4.4:87272863-87272882 | None:intergenic | 35.0% |
| !!! | TGCTTTTTCCTTCCATTTTC+AGG | - | chr4.4:87270928-87270947 | MS.gene068265:CDS | 35.0% |
| AAACCTTCTGCAGGTACTTT+AGG | + | chr4.4:87271735-87271754 | None:intergenic | 40.0% | |
| AACATATGGGGAGAACAAAG+AGG | + | chr4.4:87271169-87271188 | None:intergenic | 40.0% | |
| AATGAAGATTGTGGAAGTCC+GGG | + | chr4.4:87272510-87272529 | None:intergenic | 40.0% | |
| ACCTTGTTCGATGACACTAT+CGG | - | chr4.4:87272968-87272987 | MS.gene068265:CDS | 40.0% | |
| ATGACATGTCTATTGTCCCT+AGG | + | chr4.4:87272311-87272330 | None:intergenic | 40.0% | |
| CAATGAAGATTGTGGAAGTC+CGG | + | chr4.4:87272511-87272530 | None:intergenic | 40.0% | |
| CACATTAGATCCTACTTCTG+AGG | - | chr4.4:87270227-87270246 | MS.gene068265:CDS | 40.0% | |
| CGCTTTCTTATCAGTCACTA+TGG | + | chr4.4:87273108-87273127 | None:intergenic | 40.0% | |
| CTGCGAAAATTAATCTCTCG+AGG | - | chr4.4:87270451-87270470 | MS.gene068265:CDS | 40.0% | |
| GAAGAGATCAAGATGCATAC+AGG | + | chr4.4:87272573-87272592 | None:intergenic | 40.0% | |
| GACATGTCCACAAACTATCT+AGG | - | chr4.4:87271995-87272014 | MS.gene068265:CDS | 40.0% | |
| GACCCCTAATGAAATGGTTA+AGG | - | chr4.4:87270544-87270563 | MS.gene068265:intron | 40.0% | |
| GAGCTATCCTAGATAGTTTG+TGG | + | chr4.4:87272005-87272024 | None:intergenic | 40.0% | |
| GATGACACTATCGGATTTCA+TGG | - | chr4.4:87272977-87272996 | MS.gene068265:CDS | 40.0% | |
| GCCAAAGAGAAGCTATTACA+AGG | - | chr4.4:87270357-87270376 | MS.gene068265:CDS | 40.0% | |
| GCGTCCTACGTTGAAAATAT+AGG | - | chr4.4:87273125-87273144 | MS.gene068265:CDS | 40.0% | |
| GGATTAGACCCCTAATGAAA+TGG | - | chr4.4:87270538-87270557 | MS.gene068265:intron | 40.0% | |
| GTCTAGGAGACATAATCTAC+CGG | - | chr4.4:87272250-87272269 | MS.gene068265:CDS | 40.0% | |
| TAAGCCAATTCGAACTGTCA+CGG | + | chr4.4:87271910-87271929 | None:intergenic | 40.0% | |
| TATCAAGCTTTCTCAAGGCA+GGG | + | chr4.4:87271285-87271304 | None:intergenic | 40.0% | |
| TATTGTCCCTAGGAACTGAT+CGG | + | chr4.4:87272301-87272320 | None:intergenic | 40.0% | |
| TCACTTCTGTCTACATCTCT+TGG | + | chr4.4:87272939-87272958 | None:intergenic | 40.0% | |
| TTTGTGTTTGGCTATCTGCA+TGG | + | chr4.4:87272851-87272870 | None:intergenic | 40.0% | |
| ! | AAATGTTTTGCCATACGCAC+CGG | - | chr4.4:87270511-87270530 | MS.gene068265:intron | 40.0% |
| ! | AGGCATCAATAGTGATTTGG+AGG | - | chr4.4:87272367-87272386 | MS.gene068265:intron | 40.0% |
| ! | CACCGATTACGTTGTTGAAA+TGG | - | chr4.4:87271089-87271108 | MS.gene068265:intron | 40.0% |
| ! | CATCAATAGTGATTTGGAGG+AGG | - | chr4.4:87272370-87272389 | MS.gene068265:intron | 40.0% |
| ! | GGCAAAACATTTGGTGGTTA+AGG | + | chr4.4:87270503-87270522 | None:intergenic | 40.0% |
| ! | TAGCTTCTCTTTGGCTTCTT+TGG | + | chr4.4:87270352-87270371 | None:intergenic | 40.0% |
| ! | TTAATTTTCGCAGTTGTGCG+CGG | + | chr4.4:87270444-87270463 | None:intergenic | 40.0% |
| !! | GGTTTTTACGGACTAAGAAG+TGG | - | chr4.4:87271483-87271502 | MS.gene068265:CDS | 40.0% |
| !! | GTCACTATGGGTTGAAGTTT+TGG | + | chr4.4:87273095-87273114 | None:intergenic | 40.0% |
| !!! | GGAGGTTTTTTTTACCTCCA+TGG | + | chr4.4:87271148-87271167 | None:intergenic | 40.0% |
| ACACAGCAGAAATCCAAGGA+TGG | - | chr4.4:87271117-87271136 | MS.gene068265:intron | 45.0% | |
| AGATGTAGACAGAAGTGACG+CGG | - | chr4.4:87272941-87272960 | MS.gene068265:CDS | 45.0% | |
| ATATGGGGAGAACAAAGAGG+AGG | + | chr4.4:87271166-87271185 | None:intergenic | 45.0% | |
| ATCCAAGGATGGTTCAACCA+TGG | - | chr4.4:87271128-87271147 | MS.gene068265:intron | 45.0% | |
| ATTGTCCCTAGGAACTGATC+GGG | + | chr4.4:87272300-87272319 | None:intergenic | 45.0% | |
| CACTATCGGATTTCATGGGT+TGG | - | chr4.4:87272982-87273001 | MS.gene068265:CDS | 45.0% | |
| CAGAATGGAAGAGCAAGTCT+AGG | - | chr4.4:87272234-87272253 | MS.gene068265:CDS | 45.0% | |
| CCTGCTTCATCAAGAAGTCA+AGG | - | chr4.4:87270255-87270274 | MS.gene068265:CDS | 45.0% | |
| CCTTGACTTCTTGATGAAGC+AGG | + | chr4.4:87270258-87270277 | None:intergenic | 45.0% | |
| CGGACTAAGAAGTGGATACA+AGG | - | chr4.4:87271491-87271510 | MS.gene068265:CDS | 45.0% | |
| CGGACTTCCACAATCTTCAT+TGG | - | chr4.4:87272509-87272528 | MS.gene068265:CDS | 45.0% | |
| CTATTGGGGGAAGATATGTC+TGG | - | chr4.4:87270765-87270784 | MS.gene068265:CDS | 45.0% | |
| CTCCATCTTGCTTTCCTTTC+CGG | + | chr4.4:87271042-87271061 | None:intergenic | 45.0% | |
| CTGCTTCTTCTTCCTTGAGT+TGG | + | chr4.4:87272876-87272895 | None:intergenic | 45.0% | |
| CTGTCTACATCTCTTGGAGT+TGG | + | chr4.4:87272933-87272952 | None:intergenic | 45.0% | |
| GAAACCGTGACAGTTCGAAT+TGG | - | chr4.4:87271903-87271922 | MS.gene068265:intron | 45.0% | |
| GATATGTCTGGTGGAGGAAA+AGG | - | chr4.4:87270777-87270796 | MS.gene068265:CDS | 45.0% | |
| GCGTATGGCAAAACATTTGG+TGG | + | chr4.4:87270509-87270528 | None:intergenic | 45.0% | |
| GCTTCAGATAAACCTTCTGC+AGG | + | chr4.4:87271744-87271763 | None:intergenic | 45.0% | |
| GGGACTGAGAAGTGAATACA+GGG | + | chr4.4:87271412-87271431 | None:intergenic | 45.0% | |
| GGTGCGTATGGCAAAACATT+TGG | + | chr4.4:87270512-87270531 | None:intergenic | 45.0% | |
| GTATCAAGCTTTCTCAAGGC+AGG | + | chr4.4:87271286-87271305 | None:intergenic | 45.0% | |
| TCCAACACAGCAGAAATCCA+AGG | - | chr4.4:87271113-87271132 | MS.gene068265:intron | 45.0% | |
| TCCGATAGTGTCATCGAACA+AGG | + | chr4.4:87272972-87272991 | None:intergenic | 45.0% | |
| TCCTTGGATTTCTGCTGTGT+TGG | + | chr4.4:87271117-87271136 | None:intergenic | 45.0% | |
| TCTGCAGGTACTTTAGGTGT+AGG | + | chr4.4:87271729-87271748 | None:intergenic | 45.0% | |
| TGGGACTGAGAAGTGAATAC+AGG | + | chr4.4:87271413-87271432 | None:intergenic | 45.0% | |
| ! | ACACCTAAAGTACCTGCAGA+AGG | - | chr4.4:87271729-87271748 | MS.gene068265:intron | 45.0% |
| ! | TAATTTTCGCAGTTGTGCGC+GGG | + | chr4.4:87270443-87270462 | None:intergenic | 45.0% |
| !! | CTCTTGAAACATCGGTTTCC+CGG | - | chr4.4:87272489-87272508 | MS.gene068265:CDS | 45.0% |
| ACAAAACGCCATGCTCGTTC+GGG | + | chr4.4:87271463-87271482 | None:intergenic | 50.0% | |
| ATGGGGTTCTGCTGTGAGTT+TGG | - | chr4.4:87272422-87272441 | MS.gene068265:intron | 50.0% | |
| CAAGGATGGTTCAACCATGG+AGG | - | chr4.4:87271131-87271150 | MS.gene068265:intron | 50.0% | |
| CACAAAACGCCATGCTCGTT+CGG | + | chr4.4:87271464-87271483 | None:intergenic | 50.0% | |
| CACCGGAAAGGAAAGCAAGA+TGG | - | chr4.4:87271037-87271056 | MS.gene068265:intron | 50.0% | |
| CATCTTGCTTTCCTTTCCGG+TGG | + | chr4.4:87271039-87271058 | None:intergenic | 50.0% | |
| CTCCATGGTTGAACCATCCT+TGG | + | chr4.4:87271133-87271152 | None:intergenic | 50.0% | |
| CTTGGAGTTGGACACTTGTC+TGG | + | chr4.4:87272921-87272940 | None:intergenic | 50.0% | |
| GCAGGATCATCCTCAGAAGT+AGG | + | chr4.4:87270240-87270259 | None:intergenic | 50.0% | |
| TCAAGGCAGGGATGTTCATG+TGG | + | chr4.4:87271273-87271292 | None:intergenic | 50.0% | |
| TCGATCCCGATCAGTTCCTA+GGG | - | chr4.4:87272292-87272311 | MS.gene068265:intron | 50.0% | |
| TTAGGGGTCTAATCCCTGAC+CGG | + | chr4.4:87270533-87270552 | None:intergenic | 50.0% | |
| TTCGATCCCGATCAGTTCCT+AGG | - | chr4.4:87272291-87272310 | MS.gene068265:intron | 50.0% | |
| TTGGGGGAAGATATGTCTGG+TGG | - | chr4.4:87270768-87270787 | MS.gene068265:CDS | 50.0% | |
| ! | AATTTTCGCAGTTGTGCGCG+GGG | + | chr4.4:87270442-87270461 | None:intergenic | 50.0% |
| ! | AGCAGAACCCCATGCTGATT+TGG | + | chr4.4:87272415-87272434 | None:intergenic | 50.0% |
| ! | CTTTTAGTCCCGAACGAGCA+TGG | - | chr4.4:87271452-87271471 | MS.gene068265:CDS | 50.0% |
| ! | GTTGGACACTTGTCTGGCTT+TGG | + | chr4.4:87272915-87272934 | None:intergenic | 50.0% |
| ! | TAAGCAAATACAAGGCGCCC+TGG | + | chr4.4:87272140-87272159 | None:intergenic | 50.0% |
| !! | CACTTGTCTGGCTTTGGAAC+TGG | + | chr4.4:87272909-87272928 | None:intergenic | 50.0% |
| AGTTGTGCGCGGGGATATCT+TGG | + | chr4.4:87270433-87270452 | None:intergenic | 55.0% | |
| GCTTTCCTTTCCGGTGGCAT+TGG | + | chr4.4:87271033-87271052 | None:intergenic | 55.0% | |
| GGGGAAGATATGTCTGGTGG+AGG | - | chr4.4:87270771-87270790 | MS.gene068265:CDS | 55.0% | |
| TAATCCCTGACCGGTGCGTA+TGG | + | chr4.4:87270524-87270543 | None:intergenic | 55.0% | |
| TAGAGCCAATGCCACCGGAA+AGG | - | chr4.4:87271025-87271044 | MS.gene068265:CDS | 55.0% | |
| ! | CGAACGAGCATGGCGTTTTG+TGG | - | chr4.4:87271462-87271481 | MS.gene068265:CDS | 55.0% |
| ! | TTTGCCATACGCACCGGTCA+GGG | - | chr4.4:87270517-87270536 | MS.gene068265:intron | 55.0% |
| !! | TTTCCGGTGGCATTGGCTCT+AGG | + | chr4.4:87271026-87271045 | None:intergenic | 55.0% |
| !! | TTTTGCCATACGCACCGGTC+AGG | - | chr4.4:87270516-87270535 | MS.gene068265:intron | 55.0% |
| GCGCCTAGAGCCAATGCCAC+CGG | - | chr4.4:87271020-87271039 | MS.gene068265:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 87270111 | 87273178 | 87270111 | ID=MS.gene068265 |
| chr4.4 | mRNA | 87270111 | 87273178 | 87270111 | ID=MS.gene068265.t1;Parent=MS.gene068265 |
| chr4.4 | exon | 87272911 | 87273178 | 87272911 | ID=MS.gene068265.t1.exon1;Parent=MS.gene068265.t1 |
| chr4.4 | CDS | 87272911 | 87273178 | 87272911 | ID=cds.MS.gene068265.t1;Parent=MS.gene068265.t1 |
| chr4.4 | exon | 87272443 | 87272559 | 87272443 | ID=MS.gene068265.t1.exon2;Parent=MS.gene068265.t1 |
| chr4.4 | CDS | 87272443 | 87272559 | 87272443 | ID=cds.MS.gene068265.t1;Parent=MS.gene068265.t1 |
| chr4.4 | exon | 87272137 | 87272291 | 87272137 | ID=MS.gene068265.t1.exon3;Parent=MS.gene068265.t1 |
| chr4.4 | CDS | 87272137 | 87272291 | 87272137 | ID=cds.MS.gene068265.t1;Parent=MS.gene068265.t1 |
| chr4.4 | exon | 87271974 | 87272048 | 87271974 | ID=MS.gene068265.t1.exon4;Parent=MS.gene068265.t1 |
| chr4.4 | CDS | 87271974 | 87272048 | 87271974 | ID=cds.MS.gene068265.t1;Parent=MS.gene068265.t1 |
| chr4.4 | exon | 87271399 | 87271659 | 87271399 | ID=MS.gene068265.t1.exon5;Parent=MS.gene068265.t1 |
| chr4.4 | CDS | 87271399 | 87271659 | 87271399 | ID=cds.MS.gene068265.t1;Parent=MS.gene068265.t1 |
| chr4.4 | exon | 87270732 | 87271052 | 87270732 | ID=MS.gene068265.t1.exon6;Parent=MS.gene068265.t1 |
| chr4.4 | CDS | 87270732 | 87271052 | 87270732 | ID=cds.MS.gene068265.t1;Parent=MS.gene068265.t1 |
| chr4.4 | exon | 87270111 | 87270527 | 87270111 | ID=MS.gene068265.t1.exon7;Parent=MS.gene068265.t1 |
| chr4.4 | CDS | 87270111 | 87270527 | 87270111 | ID=cds.MS.gene068265.t1;Parent=MS.gene068265.t1 |
| Gene Sequence |
| Protein sequence |
