Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043004.t1 | XP_003620607.2 | 97 | 528 | 12 | 2 | 1 | 524 | 22 | 549 | 4.20E-288 | 1000 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043004.t1 | Q9LV40 | 65.1 | 455 | 142 | 5 | 71 | 524 | 85 | 523 | 5.6e-156 | 552.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043004.t1 | F6LPV1 | 97.0 | 528 | 12 | 2 | 1 | 524 | 22 | 549 | 3.0e-288 | 1000.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene043004 | MS.gene36316 | PPI |
| MS.gene043004 | MS.gene76499 | PPI |
| MS.gene043004 | MS.gene33398 | PPI |
| MS.gene043004 | MS.gene47812 | PPI |
| MS.gene043004 | MS.gene24948 | PPI |
| MS.gene068265 | MS.gene043004 | PPI |
| MS.gene85116 | MS.gene043004 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043004.t1 | MTR_6g087700 | 96.970 | 528 | 12 | 2 | 1 | 524 | 22 | 549 | 0.0 | 1049 |
| MS.gene043004.t1 | MTR_2g101830 | 60.755 | 530 | 173 | 12 | 6 | 524 | 28 | 533 | 0.0 | 580 |
| MS.gene043004.t1 | MTR_4g013165 | 62.379 | 412 | 134 | 11 | 122 | 524 | 1 | 400 | 4.29e-169 | 484 |
| MS.gene043004.t1 | MTR_7g065220 | 52.451 | 408 | 156 | 5 | 70 | 457 | 183 | 572 | 1.38e-142 | 426 |
| MS.gene043004.t1 | MTR_4g019770 | 54.447 | 371 | 153 | 4 | 66 | 421 | 91 | 460 | 1.55e-135 | 404 |
| MS.gene043004.t1 | MTR_4g075640 | 52.533 | 375 | 160 | 5 | 70 | 427 | 86 | 459 | 3.49e-131 | 393 |
| MS.gene043004.t1 | MTR_3g069590 | 50.653 | 383 | 163 | 5 | 70 | 433 | 99 | 474 | 3.46e-130 | 392 |
| MS.gene043004.t1 | MTR_5g081410 | 51.316 | 380 | 159 | 5 | 73 | 433 | 84 | 456 | 1.03e-129 | 390 |
| MS.gene043004.t1 | MTR_8g030850 | 47.074 | 376 | 174 | 5 | 70 | 421 | 96 | 470 | 6.24e-119 | 358 |
| MS.gene043004.t1 | MTR_7g077690 | 43.780 | 418 | 167 | 7 | 71 | 421 | 113 | 529 | 1.99e-109 | 336 |
| MS.gene043004.t1 | MTR_3g069590 | 49.102 | 334 | 150 | 4 | 70 | 384 | 99 | 431 | 4.66e-109 | 332 |
| MS.gene043004.t1 | MTR_5g025960 | 45.378 | 357 | 183 | 6 | 70 | 416 | 117 | 471 | 1.03e-97 | 306 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043004.t1 | AT3G24620 | 65.563 | 453 | 139 | 6 | 73 | 524 | 87 | 523 | 0.0 | 577 |
| MS.gene043004.t1 | AT4G13240 | 62.979 | 470 | 150 | 7 | 62 | 524 | 65 | 517 | 0.0 | 575 |
| MS.gene043004.t1 | AT1G79860 | 62.582 | 457 | 127 | 11 | 75 | 524 | 96 | 515 | 0.0 | 541 |
| MS.gene043004.t1 | AT1G52240 | 61.894 | 454 | 150 | 7 | 75 | 524 | 108 | 542 | 0.0 | 538 |
| MS.gene043004.t1 | AT5G19560 | 57.328 | 464 | 176 | 7 | 70 | 524 | 43 | 493 | 2.59e-174 | 501 |
| MS.gene043004.t1 | AT5G19560 | 57.328 | 464 | 176 | 7 | 70 | 524 | 43 | 493 | 2.59e-174 | 501 |
| MS.gene043004.t1 | AT5G19560 | 57.328 | 464 | 176 | 7 | 70 | 524 | 62 | 512 | 6.72e-174 | 500 |
| MS.gene043004.t1 | AT3G16130 | 50.958 | 522 | 211 | 12 | 14 | 522 | 45 | 534 | 2.72e-164 | 477 |
| MS.gene043004.t1 | AT5G19560 | 63.855 | 332 | 116 | 2 | 56 | 384 | 48 | 378 | 2.22e-148 | 431 |
| MS.gene043004.t1 | AT5G02010 | 48.798 | 416 | 189 | 6 | 70 | 462 | 69 | 483 | 1.25e-137 | 409 |
| MS.gene043004.t1 | AT4G38430 | 52.073 | 386 | 165 | 5 | 70 | 436 | 89 | 473 | 4.27e-135 | 402 |
| MS.gene043004.t1 | AT5G05940 | 50.943 | 371 | 160 | 4 | 71 | 420 | 102 | 471 | 1.98e-128 | 387 |
| MS.gene043004.t1 | AT5G19560 | 55.108 | 372 | 145 | 7 | 162 | 524 | 5 | 363 | 6.80e-128 | 377 |
| MS.gene043004.t1 | AT4G00460 | 50.000 | 364 | 163 | 6 | 71 | 416 | 104 | 466 | 1.02e-121 | 366 |
| MS.gene043004.t1 | AT4G00460 | 50.000 | 364 | 163 | 6 | 71 | 416 | 104 | 466 | 1.02e-121 | 366 |
| MS.gene043004.t1 | AT3G55660 | 45.192 | 416 | 190 | 7 | 34 | 415 | 57 | 468 | 2.29e-118 | 361 |
| MS.gene043004.t1 | AT1G01700 | 48.352 | 364 | 169 | 6 | 71 | 416 | 116 | 478 | 1.03e-116 | 353 |
| MS.gene043004.t1 | AT2G45890 | 47.185 | 373 | 170 | 6 | 71 | 421 | 93 | 460 | 2.93e-114 | 346 |
| MS.gene043004.t1 | AT1G01700 | 44.670 | 394 | 169 | 7 | 71 | 416 | 116 | 508 | 2.83e-110 | 338 |
| MS.gene043004.t1 | AT5G05940 | 49.552 | 335 | 147 | 4 | 71 | 384 | 102 | 435 | 5.06e-110 | 336 |
| MS.gene043004.t1 | AT3G55660 | 43.636 | 385 | 179 | 7 | 34 | 384 | 57 | 437 | 4.71e-103 | 317 |
| MS.gene043004.t1 | AT4G00460 | 47.401 | 327 | 153 | 6 | 108 | 416 | 8 | 333 | 1.72e-101 | 309 |
| MS.gene043004.t1 | AT1G31650 | 42.204 | 372 | 201 | 5 | 71 | 431 | 108 | 476 | 1.54e-96 | 303 |
| MS.gene043004.t1 | AT1G01700 | 45.161 | 341 | 161 | 7 | 71 | 386 | 116 | 455 | 4.49e-96 | 299 |
| MS.gene043004.t1 | AT1G31650 | 42.204 | 372 | 201 | 5 | 71 | 431 | 136 | 504 | 4.59e-96 | 303 |
| MS.gene043004.t1 | AT4G00460 | 52.535 | 217 | 93 | 3 | 71 | 278 | 104 | 319 | 4.00e-73 | 236 |
| MS.gene043004.t1 | AT1G01700 | 51.152 | 217 | 96 | 3 | 71 | 278 | 116 | 331 | 1.12e-70 | 231 |
| MS.gene043004.t1 | AT1G01700 | 51.152 | 217 | 96 | 3 | 71 | 278 | 116 | 331 | 1.12e-70 | 231 |
Find 109 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTTAACATTGTCTTTC+TGG | 0.097808 | 6.4:+60629822 | None:intergenic |
| TTGTTATCACCTTGTTATAT+TGG | 0.258055 | 6.4:+60629230 | None:intergenic |
| CCATGGCTGCTTTAAGTACT+TGG | 0.282520 | 6.4:+60629804 | None:intergenic |
| TTGAAGCTTCTATTGTAATA+TGG | 0.285225 | 6.4:-60629408 | MS.gene043004:CDS |
| TTAGAGATCAAAATGAATTC+TGG | 0.294452 | 6.4:-60629976 | MS.gene043004:CDS |
| AATGACTCTCTCAGATTTCA+TGG | 0.338997 | 6.4:-60628595 | MS.gene043004:CDS |
| ATCCCACCATCCTCAGAGTT+TGG | 0.353088 | 6.4:+60628651 | None:intergenic |
| AGATTTGCTAAGCTTCTTCT+AGG | 0.357290 | 6.4:-60631237 | MS.gene043004:CDS |
| AATGTAAATATAGGACATTT+TGG | 0.362227 | 6.4:-60630005 | MS.gene043004:intron |
| ATTATACCAGTTGGTGGCTT+AGG | 0.366492 | 6.4:+60631728 | None:intergenic |
| CGATCTGCTCATGAACATTC+CGG | 0.375648 | 6.4:-60630205 | MS.gene043004:CDS |
| TATTCAAGGTTTATTTGATA+AGG | 0.386545 | 6.4:-60631900 | MS.gene043004:CDS |
| ATATTGAGAGCAACTCCTAT+TGG | 0.393413 | 6.4:+60631791 | None:intergenic |
| TATACCAGCAAGGTTTGTTA+TGG | 0.393796 | 6.4:+60631158 | None:intergenic |
| GTTGTTAAAGTTCCTCCAAC+AGG | 0.408866 | 6.4:-60629878 | MS.gene043004:CDS |
| TACTGTGGAATACTTTGATC+CGG | 0.414609 | 6.4:-60629494 | MS.gene043004:CDS |
| CGGCTGGATGCCGCCAACGA+TGG | 0.421001 | 6.4:+60628717 | None:intergenic |
| ATTCTCGTTGGATTCTTTGC+CGG | 0.425301 | 6.4:-60628691 | MS.gene043004:CDS |
| TGGAAAATCTTCATGGAGTT+CGG | 0.432609 | 6.4:-60629365 | MS.gene043004:CDS |
| GTCTTCCTTTCTTGAGACAT+TGG | 0.438853 | 6.4:+60630794 | None:intergenic |
| ATAAAGATGGAAAATCTTCA+TGG | 0.441204 | 6.4:-60629372 | MS.gene043004:CDS |
| TTTGATAAGGATCATGATGA+AGG | 0.446490 | 6.4:-60631887 | MS.gene043004:CDS |
| GTTGGAGGAACTTTAACAAC+TGG | 0.450350 | 6.4:+60629881 | None:intergenic |
| TTCAAGAGTAATAGAAAGCT+TGG | 0.450795 | 6.4:-60628799 | MS.gene043004:CDS |
| ATGATCAAACAAGAGTTTCC+AGG | 0.451515 | 6.4:-60629286 | MS.gene043004:CDS |
| AATGCCATAACAAACCTTGC+TGG | 0.452672 | 6.4:-60631162 | MS.gene043004:intron |
| AGTGAAGACTGTGGAAGTCC+TGG | 0.455369 | 6.4:+60629268 | None:intergenic |
| AAGTTCTTGACCTCAAGAAT+AGG | 0.466447 | 6.4:-60629432 | MS.gene043004:CDS |
| GACATGTCAGGTGCAGGAAA+TGG | 0.467588 | 6.4:-60631210 | MS.gene043004:CDS |
| CTTCTATTGTAATATGGAAA+AGG | 0.469644 | 6.4:-60629402 | MS.gene043004:CDS |
| GCATCAAGCTTGCGCAAGGC+CGG | 0.472291 | 6.4:+60630186 | None:intergenic |
| CCATTGGAAACTCAGCCAAT+AGG | 0.473248 | 6.4:-60631806 | MS.gene043004:CDS |
| TCTTGAATAGCTCTCTAGAA+TGG | 0.475283 | 6.4:+60628815 | None:intergenic |
| AAATGGTGTTTCTTCAGCAT+TGG | 0.477319 | 6.4:-60631193 | MS.gene043004:CDS |
| GGACAAAAGGAGATTTGAAA+AGG | 0.479375 | 6.4:-60628569 | MS.gene043004:CDS |
| ATGCCTCCTAAGCCACCAAC+TGG | 0.479648 | 6.4:-60631734 | MS.gene043004:intron |
| TTCAGAAACTGACTTGATGA+AGG | 0.479930 | 6.4:-60631262 | MS.gene043004:intron |
| CGATATTAATGTCGCGCGAT+AGG | 0.480793 | 6.4:+60628423 | None:intergenic |
| TACTTGAGCATTTATTGCCA+TGG | 0.488291 | 6.4:+60629787 | None:intergenic |
| GATTTCATGGGATGGACAAA+AGG | 0.489636 | 6.4:-60628582 | MS.gene043004:CDS |
| TGTCAGATGTAGCTGTGAAA+TGG | 0.490598 | 6.4:-60629853 | MS.gene043004:CDS |
| AGAGATTCAATGTAGTTGTC+AGG | 0.493552 | 6.4:+60629746 | None:intergenic |
| AAACCTTGAATATGTTTCCC+AGG | 0.494123 | 6.4:+60631911 | None:intergenic |
| AAGCTTAGTATTTACCTCCA+TGG | 0.501321 | 6.4:+60630679 | None:intergenic |
| TTGAAAAGGACTAATTCTAC+AGG | 0.501607 | 6.4:-60628555 | MS.gene043004:CDS |
| GGTGGAGAAAAGAAATTGAA+TGG | 0.504792 | 6.4:-60630769 | MS.gene043004:CDS |
| ATACCAGTTGGTGGCTTAGG+AGG | 0.512969 | 6.4:+60631731 | None:intergenic |
| AAAAGGAAGATGAATAAAGA+TGG | 0.515789 | 6.4:-60629385 | MS.gene043004:CDS |
| CTCGTTGGATTCTTTGCCGG+TGG | 0.515807 | 6.4:-60628688 | MS.gene043004:CDS |
| TGCTCAAGTACTATCTGAGA+TGG | 0.516379 | 6.4:-60629774 | MS.gene043004:CDS |
| AACTCTGAGGATGGTGGGAT+AGG | 0.517108 | 6.4:-60628648 | MS.gene043004:CDS |
| AAGAATCCAACGAGAATCTC+CGG | 0.517591 | 6.4:+60628697 | None:intergenic |
| CTGAGGATGGTGGGATAGGA+AGG | 0.520302 | 6.4:-60628644 | MS.gene043004:CDS |
| CATCGCATCAAGCTTGCGCA+AGG | 0.528390 | 6.4:+60630182 | None:intergenic |
| GTCAAGAACTTTATGTTCTG+TGG | 0.529156 | 6.4:+60629444 | None:intergenic |
| CTCTCTCAGATTTCATGGGA+TGG | 0.531255 | 6.4:-60628590 | MS.gene043004:CDS |
| CTCAAAGAAAGAGTGACAAA+TGG | 0.531945 | 6.4:-60629910 | MS.gene043004:CDS |
| CCTATTGGCTGAGTTTCCAA+TGG | 0.532644 | 6.4:+60631806 | None:intergenic |
| TCCTTAGCTAACTGTTGTGA+TGG | 0.535551 | 6.4:+60630710 | None:intergenic |
| ATCCCTGGGAAACATATTCA+AGG | 0.535882 | 6.4:-60631914 | MS.gene043004:CDS |
| GGAGAAGACATGTCAGGTGC+AGG | 0.536981 | 6.4:-60631216 | MS.gene043004:CDS |
| GGCAATAAGCATGGAGAAGA+GGG | 0.538220 | 6.4:-60629344 | MS.gene043004:CDS |
| CATCGTTGGCGGCATCCAGC+CGG | 0.540395 | 6.4:-60628716 | MS.gene043004:CDS |
| ACTGTGGAATACTTTGATCC+GGG | 0.540800 | 6.4:-60629493 | MS.gene043004:CDS |
| GGAGATGTTTGATCAGCCAC+CGG | 0.544079 | 6.4:+60628672 | None:intergenic |
| TGGAGCCAATGTCTCAAGAA+AGG | 0.548345 | 6.4:-60630799 | MS.gene043004:CDS |
| CTTCTAGGAGAAGACATGTC+AGG | 0.550196 | 6.4:-60631222 | MS.gene043004:CDS |
| CTCCAAACTCTGAGGATGGT+GGG | 0.553349 | 6.4:-60628653 | MS.gene043004:CDS |
| AGTTTCCAATGGAATATCAC+TGG | 0.553463 | 6.4:+60631817 | None:intergenic |
| AACCTTGAATATGTTTCCCA+GGG | 0.559119 | 6.4:+60631912 | None:intergenic |
| CCAAGTACTTAAAGCAGCCA+TGG | 0.563065 | 6.4:-60629804 | MS.gene043004:CDS |
| ACATCTGACAACCCTGTTGG+AGG | 0.564848 | 6.4:+60629866 | None:intergenic |
| TCACAACAGTTAGCTAAGGA+TGG | 0.570145 | 6.4:-60630707 | MS.gene043004:CDS |
| GCTACATCTGACAACCCTGT+TGG | 0.570512 | 6.4:+60629863 | None:intergenic |
| TCTCCAAACTCTGAGGATGG+TGG | 0.572008 | 6.4:-60628654 | MS.gene043004:CDS |
| ATGACTCTCTCAGATTTCAT+GGG | 0.572048 | 6.4:-60628594 | MS.gene043004:CDS |
| CGGCAATAAGCATGGAGAAG+AGG | 0.574710 | 6.4:-60629345 | MS.gene043004:CDS |
| AGATAAATTATACCAGTTGG+TGG | 0.578436 | 6.4:+60631722 | None:intergenic |
| CTACATTGAATCTCTCCCTA+AGG | 0.579199 | 6.4:-60629738 | MS.gene043004:intron |
| AAGCTTCAATCCTATTCTTG+AGG | 0.579814 | 6.4:+60629422 | None:intergenic |
| ATGGAGTTCGGCAATAAGCA+TGG | 0.581044 | 6.4:-60629353 | MS.gene043004:CDS |
| ATCCAACGAGAATCTCCGGC+TGG | 0.581392 | 6.4:+60628701 | None:intergenic |
| ATCCAGCCGGAGATTCTCGT+TGG | 0.585511 | 6.4:-60628703 | MS.gene043004:CDS |
| GACAAAGAATCCATCGTTGG+CGG | 0.587221 | 6.4:-60628727 | MS.gene043004:CDS |
| ATATACCAGTGATATTCCAT+TGG | 0.587677 | 6.4:-60631822 | MS.gene043004:CDS |
| TTGATAAGGATCATGATGAA+GGG | 0.588470 | 6.4:-60631886 | MS.gene043004:CDS |
| AAATCTGAGAGAGTCATTGA+TGG | 0.588625 | 6.4:+60628600 | None:intergenic |
| ACATCTCCAAACTCTGAGGA+TGG | 0.591064 | 6.4:-60628657 | MS.gene043004:CDS |
| ATTGTTGAGAGGAATTGTCC+CGG | 0.601613 | 6.4:+60629475 | None:intergenic |
| TCCATCACAACAGTTAGCTA+AGG | 0.603193 | 6.4:-60630711 | MS.gene043004:CDS |
| TTGTTAAAGTTCCTCCAACA+GGG | 0.606551 | 6.4:-60629877 | MS.gene043004:CDS |
| CAGCAAAATCCAATATAACA+AGG | 0.607276 | 6.4:-60629239 | MS.gene043004:intron |
| AAAAGTGATGAGGAAGCTGA+AGG | 0.607695 | 6.4:-60629944 | MS.gene043004:CDS |
| TGTCTCAAGAAAGGAAGACT+AGG | 0.613102 | 6.4:-60630790 | MS.gene043004:CDS |
| AAAGAAAGAGTGACAAATGG+TGG | 0.613743 | 6.4:-60629907 | MS.gene043004:CDS |
| CTCAAGAAAGGAAGACTAGG+TGG | 0.617206 | 6.4:-60630787 | MS.gene043004:CDS |
| AATGACAAAGAATCCATCGT+TGG | 0.619614 | 6.4:-60628730 | MS.gene043004:CDS |
| CCAAAATGATCACAGGATGT+GGG | 0.631669 | 6.4:-60628843 | MS.gene043004:intron |
| GGGACAATTCCTCTCAACAA+TGG | 0.632556 | 6.4:-60629473 | MS.gene043004:CDS |
| CAGAATGGTAGAGAAAGCCT+TGG | 0.634845 | 6.4:-60629538 | MS.gene043004:CDS |
| GATCTATAAGTGCATTACTG+TGG | 0.648265 | 6.4:-60629509 | MS.gene043004:CDS |
| AGCTAAGGATGGATCAACCA+TGG | 0.652900 | 6.4:-60630696 | MS.gene043004:CDS |
| TTATGTAGATCATGACGACT+CGG | 0.668013 | 6.4:-60630236 | MS.gene043004:intron |
| ACTTATAGATCGACTCACCA+AGG | 0.679802 | 6.4:+60629521 | None:intergenic |
| TGGTCATGTCCATTGTTGAG+AGG | 0.679809 | 6.4:+60629464 | None:intergenic |
| TCAAACATCTCCAAACTCTG+AGG | 0.682927 | 6.4:-60628661 | MS.gene043004:CDS |
| TCTGAGAGAGTCATTGATGG+TGG | 0.705269 | 6.4:+60628603 | None:intergenic |
| CTGATATCAAGTGAAGACTG+TGG | 0.722584 | 6.4:+60629259 | None:intergenic |
| TAAGGATGGATCAACCATGG+AGG | 0.766138 | 6.4:-60630693 | MS.gene043004:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAAATGATTTTAATTC+CGG | + | chr6.4:60628851-60628870 | None:intergenic | 10.0% |
| !!! | TTGAATATTCTTTTTTTTAA+TGG | - | chr6.4:60629060-60629079 | MS.gene043004:intron | 10.0% |
| !! | TCTAATAGTAATTAAGAAAA+AGG | + | chr6.4:60630306-60630325 | None:intergenic | 15.0% |
| !! | TCTTAATTACTATTAGAATT+TGG | - | chr6.4:60630309-60630328 | MS.gene043004:intron | 15.0% |
| !! | TTTAAATAATATCGTCTAAA+GGG | + | chr6.4:60631306-60631325 | None:intergenic | 15.0% |
| !! | AAAAAAAGAACAAACAAGAT+TGG | + | chr6.4:60631425-60631444 | None:intergenic | 20.0% |
| !! | AAATAATGTAGTTACTTACA+AGG | + | chr6.4:60630197-60630216 | None:intergenic | 20.0% |
| !! | GTTTAAATAATATCGTCTAA+AGG | + | chr6.4:60631307-60631326 | None:intergenic | 20.0% |
| !! | TATTCAAGGTTTATTTGATA+AGG | - | chr6.4:60628451-60628470 | MS.gene043004:CDS | 20.0% |
| !! | TGAGTTTAATGTAAAGTTAT+TGG | + | chr6.4:60631205-60631224 | None:intergenic | 20.0% |
| !! | TTTACATTAAACTCAAAACA+CGG | - | chr6.4:60631210-60631229 | MS.gene043004:CDS | 20.0% |
| !!! | AATGTAAATATAGGACATTT+TGG | - | chr6.4:60630346-60630365 | MS.gene043004:intron | 20.0% |
| !!! | TATTTAATCGACGTATATTT+TGG | - | chr6.4:60629701-60629720 | MS.gene043004:intron | 20.0% |
| !!! | TCCAAGTAATAATTTTTCTT+CGG | + | chr6.4:60631877-60631896 | None:intergenic | 20.0% |
| !!! | TTGTATATATTTTCCAAAAG+TGG | - | chr6.4:60629260-60629279 | MS.gene043004:CDS | 20.0% |
| ! | AAAAGGAAGATGAATAAAGA+TGG | - | chr6.4:60630966-60630985 | MS.gene043004:intron | 25.0% |
| ! | AACTACATTATTTCCCTATA+AGG | - | chr6.4:60630204-60630223 | MS.gene043004:CDS | 25.0% |
| ! | ACCGAAGAAAAATTATTACT+TGG | - | chr6.4:60631873-60631892 | MS.gene043004:CDS | 25.0% |
| ! | ATAAAGATGGAAAATCTTCA+TGG | - | chr6.4:60630979-60630998 | MS.gene043004:intron | 25.0% |
| ! | CTTCTATTGTAATATGGAAA+AGG | - | chr6.4:60630949-60630968 | MS.gene043004:intron | 25.0% |
| ! | CTTTATGGCAATGTAAATAT+AGG | - | chr6.4:60630337-60630356 | MS.gene043004:intron | 25.0% |
| ! | GCTTATAAAAAAAACGCTTT+AGG | - | chr6.4:60630716-60630735 | MS.gene043004:CDS | 25.0% |
| ! | TAATAGATTGTTTATCGTTG+AGG | - | chr6.4:60631235-60631254 | MS.gene043004:CDS | 25.0% |
| ! | TAGAATTTGGACTAACTTTA+TGG | - | chr6.4:60630322-60630341 | MS.gene043004:intron | 25.0% |
| ! | TGTTTATATCAGTAGATAAG+CGG | + | chr6.4:60630675-60630694 | None:intergenic | 25.0% |
| ! | TTAGAGATCAAAATGAATTC+TGG | - | chr6.4:60630375-60630394 | MS.gene043004:intron | 25.0% |
| ! | TTGAAGCTTCTATTGTAATA+TGG | - | chr6.4:60630943-60630962 | MS.gene043004:intron | 25.0% |
| !! | AATGTAAAGTTATTGGTGTT+TGG | + | chr6.4:60631198-60631217 | None:intergenic | 25.0% |
| !! | ATCTATTTTCTTGTGAATCA+AGG | - | chr6.4:60631447-60631466 | MS.gene043004:intron | 25.0% |
| !! | TAAAAAAGTATATACCAGCA+AGG | + | chr6.4:60629206-60629225 | None:intergenic | 25.0% |
| !! | TTAGAATATGTTTCCACTTT+TGG | + | chr6.4:60629276-60629295 | None:intergenic | 25.0% |
| !! | TTGTTATCACCTTGTTATAT+TGG | + | chr6.4:60631124-60631143 | None:intergenic | 25.0% |
| !! | TTTTTACCCTCAAATCTTTA+TGG | - | chr6.4:60629220-60629239 | MS.gene043004:intron | 25.0% |
| !! | TTTTTATAAGCTCTCTCAAA+CGG | + | chr6.4:60630707-60630726 | None:intergenic | 25.0% |
| !!! | GAAAAAGTTTTGAATAAGCT+TGG | - | chr6.4:60631847-60631866 | MS.gene043004:CDS | 25.0% |
| !!! | GATTGATGATGTTTTATATG+TGG | - | chr6.4:60631594-60631613 | MS.gene043004:intron | 25.0% |
| AACTTTAATCGTAACTTCGT+AGG | - | chr6.4:60629403-60629422 | MS.gene043004:CDS | 30.0% | |
| AAGGTAATATAATCAAGGGT+CGG | - | chr6.4:60630632-60630651 | MS.gene043004:intron | 30.0% | |
| AATCTCATGATCTTAGTTCA+TGG | + | chr6.4:60628716-60628735 | None:intergenic | 30.0% | |
| ACCCTTGATTATATTACCTT+AGG | + | chr6.4:60630632-60630651 | None:intergenic | 30.0% | |
| AGATAAATTATACCAGTTGG+TGG | + | chr6.4:60628632-60628651 | None:intergenic | 30.0% | |
| ATATACCAGTGATATTCCAT+TGG | - | chr6.4:60628529-60628548 | MS.gene043004:CDS | 30.0% | |
| ATTAAGCTGCATATCCTTAT+AGG | + | chr6.4:60630221-60630240 | None:intergenic | 30.0% | |
| ATTATCTCTATACCATACCA+CGG | + | chr6.4:60630745-60630764 | None:intergenic | 30.0% | |
| CACTGTTGTTACTCTATATT+CGG | - | chr6.4:60631369-60631388 | MS.gene043004:intron | 30.0% | |
| CAGCAAAATCCAATATAACA+AGG | - | chr6.4:60631112-60631131 | MS.gene043004:intron | 30.0% | |
| CCCTAAGGTAATATAATCAA+GGG | - | chr6.4:60630628-60630647 | MS.gene043004:intron | 30.0% | |
| CCCTTGATTATATTACCTTA+GGG | + | chr6.4:60630631-60630650 | None:intergenic | 30.0% | |
| CTTTATGGTAGGAAATGAAA+TGG | - | chr6.4:60629235-60629254 | MS.gene043004:intron | 30.0% | |
| GAGAGATAAATTATACCAGT+TGG | + | chr6.4:60628635-60628654 | None:intergenic | 30.0% | |
| TCCCTAAGGTAATATAATCA+AGG | - | chr6.4:60630627-60630646 | MS.gene043004:intron | 30.0% | |
| TTAAGCTGCATATCCTTATA+GGG | + | chr6.4:60630220-60630239 | None:intergenic | 30.0% | |
| TTCAAGAGTAATAGAAAGCT+TGG | - | chr6.4:60631552-60631571 | MS.gene043004:intron | 30.0% | |
| TTCCTACCATAAAGATTTGA+GGG | + | chr6.4:60629229-60629248 | None:intergenic | 30.0% | |
| TTGAAAAGGACTAATTCTAC+AGG | - | chr6.4:60631796-60631815 | MS.gene043004:CDS | 30.0% | |
| TTGATAAGGATCATGATGAA+GGG | - | chr6.4:60628465-60628484 | MS.gene043004:CDS | 30.0% | |
| TTTCCTACCATAAAGATTTG+AGG | + | chr6.4:60629230-60629249 | None:intergenic | 30.0% | |
| TTTGATAAGGATCATGATGA+AGG | - | chr6.4:60628464-60628483 | MS.gene043004:CDS | 30.0% | |
| ! | ATCTAGAAATTTGAAGTCGT+GGG | + | chr6.4:60630049-60630068 | None:intergenic | 30.0% |
| ! | CTTAGTTCATGGCTTTTAAA+TGG | + | chr6.4:60628705-60628724 | None:intergenic | 30.0% |
| ! | TTTCATGTAGCATCTGTTTT+TGG | - | chr6.4:60629515-60629534 | MS.gene043004:CDS | 30.0% |
| !! | AGTTATTTTGTGTTGTTAGC+CGG | - | chr6.4:60628829-60628848 | MS.gene043004:CDS | 30.0% |
| !! | TGACAATTACGATTTGTTGA+CGG | + | chr6.4:60629366-60629385 | None:intergenic | 30.0% |
| !! | TGGCTTATACAGTTTTATCA+AGG | - | chr6.4:60631572-60631591 | MS.gene043004:intron | 30.0% |
| !! | TTTTGGAGAACAATCAAAGT+TGG | - | chr6.4:60629532-60629551 | MS.gene043004:CDS | 30.0% |
| AAACCTTGAATATGTTTCCC+AGG | + | chr6.4:60628443-60628462 | None:intergenic | 35.0% | |
| AAAGAAAGAGTGACAAATGG+TGG | - | chr6.4:60630444-60630463 | MS.gene043004:intron | 35.0% | |
| AAATCTGAGAGAGTCATTGA+TGG | + | chr6.4:60631754-60631773 | None:intergenic | 35.0% | |
| AAATGGTGTTTCTTCAGCAT+TGG | - | chr6.4:60629158-60629177 | MS.gene043004:intron | 35.0% | |
| AACCTTGAATATGTTTCCCA+GGG | + | chr6.4:60628442-60628461 | None:intergenic | 35.0% | |
| AAGCTTAGTATTTACCTCCA+TGG | + | chr6.4:60629675-60629694 | None:intergenic | 35.0% | |
| AAGCTTCAATCCTATTCTTG+AGG | + | chr6.4:60630932-60630951 | None:intergenic | 35.0% | |
| AAGTTCTTGACCTCAAGAAT+AGG | - | chr6.4:60630919-60630938 | MS.gene043004:intron | 35.0% | |
| AATGACAAAGAATCCATCGT+TGG | - | chr6.4:60631621-60631640 | MS.gene043004:intron | 35.0% | |
| AATGACTCTCTCAGATTTCA+TGG | - | chr6.4:60631756-60631775 | MS.gene043004:CDS | 35.0% | |
| AGAGATTCAATGTAGTTGTC+AGG | + | chr6.4:60630608-60630627 | None:intergenic | 35.0% | |
| AGTCATTAGATCAAGATCAG+AGG | + | chr6.4:60629866-60629885 | None:intergenic | 35.0% | |
| AGTTTCCAATGGAATATCAC+TGG | + | chr6.4:60628537-60628556 | None:intergenic | 35.0% | |
| ATATTGAGAGCAACTCCTAT+TGG | + | chr6.4:60628563-60628582 | None:intergenic | 35.0% | |
| ATGACTCTCTCAGATTTCAT+GGG | - | chr6.4:60631757-60631776 | MS.gene043004:CDS | 35.0% | |
| ATGATCAAACAAGAGTTTCC+AGG | - | chr6.4:60631065-60631084 | MS.gene043004:intron | 35.0% | |
| ATTCTTCGCATTCAAGCAAT+TGG | + | chr6.4:60629898-60629917 | None:intergenic | 35.0% | |
| CTCAAAGAAAGAGTGACAAA+TGG | - | chr6.4:60630441-60630460 | MS.gene043004:intron | 35.0% | |
| CTTGGTTAACATTGTCTTTC+TGG | + | chr6.4:60630532-60630551 | None:intergenic | 35.0% | |
| CTTTCATGTCTTTGTCAGAA+TGG | - | chr6.4:60630798-60630817 | MS.gene043004:CDS | 35.0% | |
| GAACTAAGATCATGAGATTC+TGG | - | chr6.4:60628717-60628736 | MS.gene043004:CDS | 35.0% | |
| GATCTATAAGTGCATTACTG+TGG | - | chr6.4:60630842-60630861 | MS.gene043004:intron | 35.0% | |
| GATTGTTTATCGTTGAGGTA+TGG | - | chr6.4:60631240-60631259 | MS.gene043004:CDS | 35.0% | |
| GCAGCTTAATTTAACGCTTA+TGG | - | chr6.4:60630231-60630250 | MS.gene043004:CDS | 35.0% | |
| GCTCATAGTTTACTGATAAG+TGG | - | chr6.4:60631262-60631281 | MS.gene043004:intron | 35.0% | |
| GGACAAAAGGAGATTTGAAA+AGG | - | chr6.4:60631782-60631801 | MS.gene043004:CDS | 35.0% | |
| GGTGGAGAAAAGAAATTGAA+TGG | - | chr6.4:60629582-60629601 | MS.gene043004:intron | 35.0% | |
| GTATGTCTCAAAAAGTGATG+AGG | - | chr6.4:60630397-60630416 | MS.gene043004:intron | 35.0% | |
| GTCAAGAACTTTATGTTCTG+TGG | + | chr6.4:60630910-60630929 | None:intergenic | 35.0% | |
| GTCATTAGATCAAGATCAGA+GGG | + | chr6.4:60629865-60629884 | None:intergenic | 35.0% | |
| TACCCTCAAATCTTTATGGT+AGG | - | chr6.4:60629224-60629243 | MS.gene043004:intron | 35.0% | |
| TACTGTGGAATACTTTGATC+CGG | - | chr6.4:60630857-60630876 | MS.gene043004:intron | 35.0% | |
| TACTTGAGCATTTATTGCCA+TGG | + | chr6.4:60630567-60630586 | None:intergenic | 35.0% | |
| TAGTTTACTGATAAGTGGAC+CGG | - | chr6.4:60631267-60631286 | MS.gene043004:intron | 35.0% | |
| TGGAAAATCTTCATGGAGTT+CGG | - | chr6.4:60630986-60631005 | MS.gene043004:intron | 35.0% | |
| TTATGTAGATCATGACGACT+CGG | - | chr6.4:60630115-60630134 | MS.gene043004:intron | 35.0% | |
| TTCAGACAATTGTGACAATG+TGG | - | chr6.4:60629757-60629776 | MS.gene043004:CDS | 35.0% | |
| TTCTTCGCATTCAAGCAATT+GGG | + | chr6.4:60629897-60629916 | None:intergenic | 35.0% | |
| TTGTTAAAGTTCCTCCAACA+GGG | - | chr6.4:60630474-60630493 | MS.gene043004:intron | 35.0% | |
| ! | GATCTAGAAATTTGAAGTCG+TGG | + | chr6.4:60630050-60630069 | None:intergenic | 35.0% |
| ! | TCTTGAATAGCTCTCTAGAA+TGG | + | chr6.4:60631539-60631558 | None:intergenic | 35.0% |
| !! | AGATTTGCTAAGCTTCTTCT+AGG | - | chr6.4:60629114-60629133 | MS.gene043004:intron | 35.0% |
| !! | ATCGACGTATATTTTGGATC+CGG | - | chr6.4:60629707-60629726 | MS.gene043004:intron | 35.0% |
| !! | CATGACATGTGGTTTGTTAT+AGG | - | chr6.4:60629317-60629336 | MS.gene043004:CDS | 35.0% |
| !! | TATACCAGCAAGGTTTGTTA+TGG | + | chr6.4:60629196-60629215 | None:intergenic | 35.0% |
| !! | TTCAGAAACTGACTTGATGA+AGG | - | chr6.4:60629089-60629108 | MS.gene043004:intron | 35.0% |
| AAAAGTGATGAGGAAGCTGA+AGG | - | chr6.4:60630407-60630426 | MS.gene043004:intron | 40.0% | |
| AAGAATCCAACGAGAATCTC+CGG | + | chr6.4:60631657-60631676 | None:intergenic | 40.0% | |
| AATGCCATAACAAACCTTGC+TGG | - | chr6.4:60629189-60629208 | MS.gene043004:intron | 40.0% | |
| ACATGACATGACATGACATG+TGG | - | chr6.4:60629306-60629325 | MS.gene043004:CDS | 40.0% | |
| ACTGCTTCCAAAATGATCAC+AGG | - | chr6.4:60631501-60631520 | MS.gene043004:intron | 40.0% | |
| ACTGTGGAATACTTTGATCC+GGG | - | chr6.4:60630858-60630877 | MS.gene043004:intron | 40.0% | |
| ATCCCTGGGAAACATATTCA+AGG | - | chr6.4:60628437-60628456 | MS.gene043004:CDS | 40.0% | |
| ATTCGAATTCCATGCAGTCA+AGG | + | chr6.4:60629921-60629940 | None:intergenic | 40.0% | |
| ATTCTCGTTGGATTCTTTGC+CGG | - | chr6.4:60631660-60631679 | MS.gene043004:intron | 40.0% | |
| ATTGTTGAGAGGAATTGTCC+CGG | + | chr6.4:60630879-60630898 | None:intergenic | 40.0% | |
| CAAGATTGGATCACGAAGTT+TGG | + | chr6.4:60631411-60631430 | None:intergenic | 40.0% | |
| CAGAGAATCCTTAATCGTAG+GGG | + | chr6.4:60629735-60629754 | None:intergenic | 40.0% | |
| CCAAAATGATCACAGGATGT+GGG | - | chr6.4:60631508-60631527 | MS.gene043004:intron | 40.0% | |
| CTACATTGAATCTCTCCCTA+AGG | - | chr6.4:60630613-60630632 | MS.gene043004:intron | 40.0% | |
| CTGATATCAAGTGAAGACTG+TGG | + | chr6.4:60631095-60631114 | None:intergenic | 40.0% | |
| GAGTCGTCATGATCTACATA+AGG | + | chr6.4:60630116-60630135 | None:intergenic | 40.0% | |
| GATTTCATGGGATGGACAAA+AGG | - | chr6.4:60631769-60631788 | MS.gene043004:CDS | 40.0% | |
| GCAGAGAATCCTTAATCGTA+GGG | + | chr6.4:60629736-60629755 | None:intergenic | 40.0% | |
| GTCTTCCTTTCTTGAGACAT+TGG | + | chr6.4:60629560-60629579 | None:intergenic | 40.0% | |
| GTTACTCTATATTCGGAGAC+TGG | - | chr6.4:60631376-60631395 | MS.gene043004:intron | 40.0% | |
| GTTGGAGGAACTTTAACAAC+TGG | + | chr6.4:60630473-60630492 | None:intergenic | 40.0% | |
| GTTGTTAAAGTTCCTCCAAC+AGG | - | chr6.4:60630473-60630492 | MS.gene043004:intron | 40.0% | |
| TCAAACATCTCCAAACTCTG+AGG | - | chr6.4:60631690-60631709 | MS.gene043004:intron | 40.0% | |
| TCACAACAGTTAGCTAAGGA+TGG | - | chr6.4:60629644-60629663 | MS.gene043004:intron | 40.0% | |
| TCCAAAATGATCACAGGATG+TGG | - | chr6.4:60631507-60631526 | MS.gene043004:intron | 40.0% | |
| TCCATCACAACAGTTAGCTA+AGG | - | chr6.4:60629640-60629659 | MS.gene043004:intron | 40.0% | |
| TCCTTAGCTAACTGTTGTGA+TGG | + | chr6.4:60629644-60629663 | None:intergenic | 40.0% | |
| TGCAGAGAATCCTTAATCGT+AGG | + | chr6.4:60629737-60629756 | None:intergenic | 40.0% | |
| TGCTCAAGTACTATCTGAGA+TGG | - | chr6.4:60630577-60630596 | MS.gene043004:intron | 40.0% | |
| TGTCAGATGTAGCTGTGAAA+TGG | - | chr6.4:60630498-60630517 | MS.gene043004:intron | 40.0% | |
| TGTCTCAAGAAAGGAAGACT+AGG | - | chr6.4:60629561-60629580 | MS.gene043004:intron | 40.0% | |
| ! | ACTTATAGATCGACTCACCA+AGG | + | chr6.4:60630833-60630852 | None:intergenic | 40.0% |
| !! | AAAAACGCTTTAGGATTCCG+TGG | - | chr6.4:60630725-60630744 | MS.gene043004:CDS | 40.0% |
| !! | ATTATACCAGTTGGTGGCTT+AGG | + | chr6.4:60628626-60628645 | None:intergenic | 40.0% |
| ACCATCCGATCATGATCGAA+CGG | + | chr6.4:60629783-60629802 | None:intergenic | 45.0% | |
| AGCTAAGGATGGATCAACCA+TGG | - | chr6.4:60629655-60629674 | MS.gene043004:intron | 45.0% | |
| ATGGAGTTCGGCAATAAGCA+TGG | - | chr6.4:60630998-60631017 | MS.gene043004:intron | 45.0% | |
| CAGAATGGTAGAGAAAGCCT+TGG | - | chr6.4:60630813-60630832 | MS.gene043004:CDS | 45.0% | |
| CCAAGTACTTAAAGCAGCCA+TGG | - | chr6.4:60630547-60630566 | MS.gene043004:intron | 45.0% | |
| CCATTGGAAACTCAGCCAAT+AGG | - | chr6.4:60628545-60628564 | MS.gene043004:CDS | 45.0% | |
| CGATCTGCTCATGAACATTC+CGG | - | chr6.4:60630146-60630165 | MS.gene043004:intron | 45.0% | |
| CTCAAGAAAGGAAGACTAGG+TGG | - | chr6.4:60629564-60629583 | MS.gene043004:intron | 45.0% | |
| CTCTCTCAGATTTCATGGGA+TGG | - | chr6.4:60631761-60631780 | MS.gene043004:CDS | 45.0% | |
| GACAAAGAATCCATCGTTGG+CGG | - | chr6.4:60631624-60631643 | MS.gene043004:intron | 45.0% | |
| GGCAATAAGCATGGAGAAGA+GGG | - | chr6.4:60631007-60631026 | MS.gene043004:intron | 45.0% | |
| GGGACAATTCCTCTCAACAA+TGG | - | chr6.4:60630878-60630897 | MS.gene043004:intron | 45.0% | |
| TAAGGATGGATCAACCATGG+AGG | - | chr6.4:60629658-60629677 | MS.gene043004:intron | 45.0% | |
| TCTGAGAGAGTCATTGATGG+TGG | + | chr6.4:60631751-60631770 | None:intergenic | 45.0% | |
| TGGAGCCAATGTCTCAAGAA+AGG | - | chr6.4:60629552-60629571 | MS.gene043004:intron | 45.0% | |
| TGGTCATGTCCATTGTTGAG+AGG | + | chr6.4:60630890-60630909 | None:intergenic | 45.0% | |
| ! | ACATCTCCAAACTCTGAGGA+TGG | - | chr6.4:60631694-60631713 | MS.gene043004:intron | 45.0% |
| ! | CCATGGCTGCTTTAAGTACT+TGG | + | chr6.4:60630550-60630569 | None:intergenic | 45.0% |
| ! | CCCACATCCTGTGATCATTT+TGG | + | chr6.4:60631511-60631530 | None:intergenic | 45.0% |
| ! | CCTATTGGCTGAGTTTCCAA+TGG | + | chr6.4:60628548-60628567 | None:intergenic | 45.0% |
| ! | CTTCTAGGAGAAGACATGTC+AGG | - | chr6.4:60629129-60629148 | MS.gene043004:intron | 45.0% |
| AAAGGGTAGTCGAGAGTGAC+CGG | + | chr6.4:60631289-60631308 | None:intergenic | 50.0% | |
| ACATCTGACAACCCTGTTGG+AGG | + | chr6.4:60630488-60630507 | None:intergenic | 50.0% | |
| AGTGAAGACTGTGGAAGTCC+TGG | + | chr6.4:60631086-60631105 | None:intergenic | 50.0% | |
| ATCCCACCATCCTCAGAGTT+TGG | + | chr6.4:60631703-60631722 | None:intergenic | 50.0% | |
| ATCCTTAATCGTAGGGGAGC+CGG | + | chr6.4:60629729-60629748 | None:intergenic | 50.0% | |
| CGGCAATAAGCATGGAGAAG+AGG | - | chr6.4:60631006-60631025 | MS.gene043004:intron | 50.0% | |
| GACATGTCAGGTGCAGGAAA+TGG | - | chr6.4:60629141-60629160 | MS.gene043004:intron | 50.0% | |
| GCGAAGAATCCTTGACTGCA+TGG | - | chr6.4:60629909-60629928 | MS.gene043004:CDS | 50.0% | |
| GCTACATCTGACAACCCTGT+TGG | + | chr6.4:60630491-60630510 | None:intergenic | 50.0% | |
| GGAGATGTTTGATCAGCCAC+CGG | + | chr6.4:60631682-60631701 | None:intergenic | 50.0% | |
| TGTGGCCGTTCGATCATGAT+CGG | - | chr6.4:60629775-60629794 | MS.gene043004:CDS | 50.0% | |
| ! | CTCCAAACTCTGAGGATGGT+GGG | - | chr6.4:60631698-60631717 | MS.gene043004:intron | 50.0% |
| ! | TCTCCAAACTCTGAGGATGG+TGG | - | chr6.4:60631697-60631716 | MS.gene043004:intron | 50.0% |
| !! | AACTCTGAGGATGGTGGGAT+AGG | - | chr6.4:60631703-60631722 | MS.gene043004:intron | 50.0% |
| !! | ATACCAGTTGGTGGCTTAGG+AGG | + | chr6.4:60628623-60628642 | None:intergenic | 50.0% |
| !! | CGCTTTAGGATTCCGTGGTA+TGG | - | chr6.4:60630730-60630749 | MS.gene043004:CDS | 50.0% |
| ATCCAACGAGAATCTCCGGC+TGG | + | chr6.4:60631653-60631672 | None:intergenic | 55.0% | |
| ATCCAGCCGGAGATTCTCGT+TGG | - | chr6.4:60631648-60631667 | MS.gene043004:intron | 55.0% | |
| ATCCGGCTCCCCTACGATTA+AGG | - | chr6.4:60629724-60629743 | MS.gene043004:intron | 55.0% | |
| ATGCCTCCTAAGCCACCAAC+TGG | - | chr6.4:60628617-60628636 | MS.gene043004:CDS | 55.0% | |
| CATCGCATCAAGCTTGCGCA+AGG | + | chr6.4:60630172-60630191 | None:intergenic | 55.0% | |
| CTCGTTGGATTCTTTGCCGG+TGG | - | chr6.4:60631663-60631682 | MS.gene043004:intron | 55.0% | |
| GCCGTTCGATCATGATCGGA+TGG | - | chr6.4:60629779-60629798 | MS.gene043004:CDS | 55.0% | |
| GGAGAAGACATGTCAGGTGC+AGG | - | chr6.4:60629135-60629154 | MS.gene043004:intron | 55.0% | |
| !! | CTGAGGATGGTGGGATAGGA+AGG | - | chr6.4:60631707-60631726 | MS.gene043004:intron | 55.0% |
| GCATCAAGCTTGCGCAAGGC+CGG | + | chr6.4:60630168-60630187 | None:intergenic | 60.0% | |
| CATCGTTGGCGGCATCCAGC+CGG | - | chr6.4:60631635-60631654 | MS.gene043004:intron | 65.0% | |
| CGGCTGGATGCCGCCAACGA+TGG | + | chr6.4:60631637-60631656 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 60628428 | 60631945 | 60628428 | ID=MS.gene043004 |
| chr6.4 | mRNA | 60628428 | 60631945 | 60628428 | ID=MS.gene043004.t1;Parent=MS.gene043004 |
| chr6.4 | exon | 60631735 | 60631945 | 60631735 | ID=MS.gene043004.t1.exon1;Parent=MS.gene043004.t1 |
| chr6.4 | CDS | 60631735 | 60631945 | 60631735 | ID=cds.MS.gene043004.t1;Parent=MS.gene043004.t1 |
| chr6.4 | exon | 60631163 | 60631279 | 60631163 | ID=MS.gene043004.t1.exon2;Parent=MS.gene043004.t1 |
| chr6.4 | CDS | 60631163 | 60631279 | 60631163 | ID=cds.MS.gene043004.t1;Parent=MS.gene043004.t1 |
| chr6.4 | exon | 60630694 | 60630848 | 60630694 | ID=MS.gene043004.t1.exon3;Parent=MS.gene043004.t1 |
| chr6.4 | CDS | 60630694 | 60630848 | 60630694 | ID=cds.MS.gene043004.t1;Parent=MS.gene043004.t1 |
| chr6.4 | exon | 60630176 | 60630250 | 60630176 | ID=MS.gene043004.t1.exon4;Parent=MS.gene043004.t1 |
| chr6.4 | CDS | 60630176 | 60630250 | 60630176 | ID=cds.MS.gene043004.t1;Parent=MS.gene043004.t1 |
| chr6.4 | exon | 60629739 | 60630014 | 60629739 | ID=MS.gene043004.t1.exon5;Parent=MS.gene043004.t1 |
| chr6.4 | CDS | 60629739 | 60630014 | 60629739 | ID=cds.MS.gene043004.t1;Parent=MS.gene043004.t1 |
| chr6.4 | exon | 60629240 | 60629557 | 60629240 | ID=MS.gene043004.t1.exon6;Parent=MS.gene043004.t1 |
| chr6.4 | CDS | 60629240 | 60629557 | 60629240 | ID=cds.MS.gene043004.t1;Parent=MS.gene043004.t1 |
| chr6.4 | exon | 60628428 | 60628850 | 60628428 | ID=MS.gene043004.t1.exon7;Parent=MS.gene043004.t1 |
| chr6.4 | CDS | 60628428 | 60628850 | 60628428 | ID=cds.MS.gene043004.t1;Parent=MS.gene043004.t1 |
| Gene Sequence |
| Protein sequence |
