Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068358.t1 | XP_013444608.1 | 97.6 | 623 | 15 | 0 | 1 | 623 | 1 | 623 | 0.00E+00 | 1140.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068358.t1 | A0A3Q7ELQ2 | 60.0 | 625 | 209 | 12 | 9 | 623 | 4 | 597 | 1.3e-188 | 661.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068358.t1 | A0A072TP53 | 97.6 | 623 | 15 | 0 | 1 | 623 | 1 | 623 | 0.0e+00 | 1140.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene068358.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene06010 | MS.gene068358 | 0.800533 | 1.38E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene97030 | MS.gene068358 | PPI |
MS.gene068358 | MS.gene018737 | PPI |
MS.gene068358 | MS.gene020342 | PPI |
MS.gene23513 | MS.gene068358 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068358.t1 | MTR_8g027495 | 97.592 | 623 | 15 | 0 | 1 | 623 | 1 | 623 | 0.0 | 1254 |
MS.gene068358.t1 | MTR_7g117670 | 56.719 | 640 | 169 | 19 | 12 | 623 | 8 | 567 | 0.0 | 600 |
MS.gene068358.t1 | MTR_7g096350 | 54.922 | 193 | 65 | 5 | 431 | 618 | 327 | 502 | 1.17e-55 | 197 |
MS.gene068358.t1 | MTR_7g096350 | 34.310 | 239 | 125 | 8 | 14 | 241 | 9 | 226 | 5.46e-31 | 127 |
MS.gene068358.t1 | MTR_8g067280 | 44.240 | 217 | 98 | 5 | 423 | 617 | 424 | 639 | 1.46e-43 | 166 |
MS.gene068358.t1 | MTR_8g067280 | 35.714 | 196 | 108 | 9 | 51 | 241 | 52 | 234 | 4.41e-21 | 98.2 |
MS.gene068358.t1 | MTR_5g030430 | 42.793 | 222 | 102 | 4 | 419 | 617 | 451 | 670 | 4.63e-42 | 162 |
MS.gene068358.t1 | MTR_5g030430 | 31.343 | 268 | 154 | 8 | 51 | 296 | 43 | 302 | 4.85e-22 | 101 |
MS.gene068358.t1 | MTR_8g024790 | 38.953 | 172 | 96 | 1 | 438 | 600 | 271 | 442 | 2.77e-33 | 133 |
MS.gene068358.t1 | MTR_8g024770 | 41.270 | 189 | 97 | 4 | 438 | 613 | 259 | 446 | 5.47e-33 | 132 |
MS.gene068358.t1 | MTR_5g030420 | 31.472 | 197 | 127 | 4 | 51 | 247 | 26 | 214 | 1.05e-21 | 94.7 |
MS.gene068358.t1 | MTR_5g030420 | 31.472 | 197 | 127 | 4 | 51 | 247 | 26 | 214 | 1.70e-21 | 94.7 |
MS.gene068358.t1 | MTR_8g098275 | 32.597 | 181 | 103 | 6 | 66 | 239 | 14 | 182 | 1.82e-17 | 86.7 |
MS.gene068358.t1 | MTR_8g098275 | 51.389 | 72 | 35 | 0 | 455 | 526 | 398 | 469 | 1.04e-14 | 77.8 |
MS.gene068358.t1 | MTR_4g092700 | 38.938 | 113 | 61 | 2 | 456 | 560 | 156 | 268 | 2.03e-16 | 81.3 |
MS.gene068358.t1 | MTR_2g010450 | 31.618 | 136 | 84 | 2 | 458 | 584 | 177 | 312 | 2.81e-16 | 81.3 |
MS.gene068358.t1 | MTR_1g072320 | 28.283 | 198 | 119 | 7 | 50 | 241 | 8 | 188 | 3.69e-16 | 82.4 |
MS.gene068358.t1 | MTR_1g072320 | 55.000 | 60 | 27 | 0 | 458 | 517 | 470 | 529 | 2.28e-14 | 77.0 |
MS.gene068358.t1 | MTR_5g014640 | 39.252 | 107 | 60 | 2 | 459 | 560 | 155 | 261 | 1.27e-15 | 79.0 |
MS.gene068358.t1 | MTR_8g098275 | 51.389 | 72 | 35 | 0 | 455 | 526 | 241 | 312 | 5.15e-15 | 78.2 |
MS.gene068358.t1 | MTR_5g014600 | 30.405 | 148 | 82 | 3 | 458 | 584 | 149 | 296 | 5.21e-15 | 77.0 |
MS.gene068358.t1 | MTR_8g098275 | 51.389 | 72 | 35 | 0 | 455 | 526 | 305 | 376 | 7.45e-15 | 78.2 |
MS.gene068358.t1 | MTR_2g104550 | 29.221 | 154 | 81 | 3 | 435 | 560 | 96 | 249 | 1.26e-14 | 75.5 |
MS.gene068358.t1 | MTR_3g498695 | 37.500 | 120 | 65 | 1 | 456 | 565 | 296 | 415 | 1.42e-14 | 77.0 |
MS.gene068358.t1 | MTR_3g498695 | 37.500 | 120 | 65 | 1 | 456 | 565 | 296 | 415 | 1.42e-14 | 77.0 |
MS.gene068358.t1 | MTR_4g067010 | 30.286 | 175 | 101 | 3 | 437 | 603 | 136 | 297 | 1.54e-14 | 75.5 |
MS.gene068358.t1 | MTR_1g112680 | 41.489 | 94 | 49 | 2 | 423 | 516 | 288 | 375 | 3.96e-14 | 75.9 |
MS.gene068358.t1 | MTR_4g097950 | 34.711 | 121 | 64 | 2 | 458 | 563 | 70 | 190 | 4.39e-14 | 72.8 |
MS.gene068358.t1 | MTR_6g047550 | 51.562 | 64 | 31 | 0 | 458 | 521 | 173 | 236 | 5.89e-14 | 73.2 |
MS.gene068358.t1 | MTR_0250s0040 | 44.318 | 88 | 44 | 2 | 435 | 522 | 70 | 152 | 7.04e-14 | 72.8 |
MS.gene068358.t1 | MTR_4g097940 | 34.146 | 123 | 62 | 3 | 446 | 558 | 147 | 260 | 7.57e-14 | 73.6 |
MS.gene068358.t1 | MTR_2g084280 | 27.011 | 174 | 113 | 4 | 438 | 605 | 121 | 286 | 9.29e-14 | 73.2 |
MS.gene068358.t1 | MTR_0246s0020 | 44.872 | 78 | 37 | 1 | 444 | 521 | 190 | 261 | 1.09e-13 | 73.6 |
MS.gene068358.t1 | MTR_0246s0020 | 44.872 | 78 | 37 | 1 | 444 | 521 | 190 | 261 | 1.25e-13 | 73.6 |
MS.gene068358.t1 | MTR_5g014520 | 27.922 | 154 | 103 | 1 | 458 | 603 | 157 | 310 | 1.29e-13 | 72.8 |
MS.gene068358.t1 | MTR_2g038040 | 29.268 | 164 | 95 | 4 | 459 | 601 | 53 | 216 | 1.30e-13 | 71.2 |
MS.gene068358.t1 | MTR_4g066380 | 46.753 | 77 | 31 | 1 | 437 | 513 | 142 | 208 | 1.45e-13 | 72.8 |
MS.gene068358.t1 | MTR_4g057270 | 32.353 | 170 | 100 | 7 | 462 | 616 | 153 | 322 | 1.56e-13 | 72.8 |
MS.gene068358.t1 | MTR_4g066460 | 46.753 | 77 | 31 | 1 | 437 | 513 | 144 | 210 | 3.14e-13 | 71.6 |
MS.gene068358.t1 | MTR_0011s0210 | 29.885 | 174 | 107 | 3 | 458 | 619 | 183 | 353 | 4.31e-13 | 71.6 |
MS.gene068358.t1 | MTR_0011s0260 | 28.736 | 174 | 109 | 3 | 458 | 619 | 183 | 353 | 4.72e-13 | 71.2 |
MS.gene068358.t1 | MTR_6g047570 | 29.221 | 154 | 93 | 2 | 458 | 599 | 159 | 308 | 5.18e-13 | 70.9 |
MS.gene068358.t1 | MTR_3g030700 | 26.131 | 199 | 133 | 3 | 438 | 622 | 176 | 374 | 6.20e-13 | 71.2 |
MS.gene068358.t1 | MTR_7g083900 | 53.333 | 60 | 28 | 0 | 456 | 515 | 284 | 343 | 6.76e-13 | 71.6 |
MS.gene068358.t1 | MTR_7g083900 | 53.333 | 60 | 28 | 0 | 456 | 515 | 284 | 343 | 6.96e-13 | 71.6 |
MS.gene068358.t1 | MTR_5g014560 | 26.744 | 172 | 103 | 3 | 460 | 615 | 133 | 297 | 1.92e-12 | 68.9 |
MS.gene068358.t1 | MTR_2g104490 | 31.405 | 121 | 76 | 3 | 446 | 560 | 126 | 245 | 4.00e-12 | 67.8 |
MS.gene068358.t1 | MTR_2g104490 | 31.405 | 121 | 76 | 3 | 446 | 560 | 126 | 245 | 4.00e-12 | 68.2 |
MS.gene068358.t1 | MTR_4g009110 | 38.961 | 77 | 43 | 1 | 444 | 520 | 164 | 236 | 4.97e-12 | 68.2 |
MS.gene068358.t1 | MTR_2g104560 | 24.405 | 168 | 120 | 2 | 459 | 619 | 55 | 222 | 5.53e-12 | 66.2 |
MS.gene068358.t1 | MTR_4g097920 | 48.276 | 58 | 30 | 0 | 454 | 511 | 136 | 193 | 8.01e-12 | 67.0 |
MS.gene068358.t1 | MTR_3g104100 | 24.432 | 176 | 114 | 4 | 462 | 618 | 199 | 374 | 8.84e-12 | 67.8 |
MS.gene068358.t1 | MTR_4g097920 | 48.276 | 58 | 30 | 0 | 454 | 511 | 151 | 208 | 9.02e-12 | 67.0 |
MS.gene068358.t1 | MTR_4g009540 | 37.662 | 77 | 44 | 1 | 444 | 520 | 142 | 214 | 1.49e-11 | 66.2 |
MS.gene068358.t1 | MTR_2g081040 | 24.432 | 176 | 114 | 4 | 462 | 618 | 181 | 356 | 1.75e-11 | 66.6 |
MS.gene068358.t1 | MTR_4g009540 | 37.662 | 77 | 44 | 1 | 444 | 520 | 142 | 214 | 1.79e-11 | 66.2 |
MS.gene068358.t1 | MTR_8g009010 | 30.075 | 133 | 92 | 1 | 382 | 513 | 57 | 189 | 2.63e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068358.t1 | AT1G01260 | 48.297 | 646 | 236 | 18 | 9 | 623 | 4 | 582 | 0.0 | 529 |
MS.gene068358.t1 | AT1G01260 | 48.297 | 646 | 236 | 18 | 9 | 623 | 4 | 582 | 0.0 | 529 |
MS.gene068358.t1 | AT1G01260 | 48.297 | 646 | 236 | 18 | 9 | 623 | 4 | 582 | 0.0 | 529 |
MS.gene068358.t1 | AT2G46510 | 44.427 | 637 | 233 | 16 | 13 | 622 | 8 | 550 | 1.69e-165 | 485 |
MS.gene068358.t1 | AT1G32640 | 32.781 | 604 | 317 | 17 | 51 | 616 | 66 | 618 | 4.01e-73 | 247 |
MS.gene068358.t1 | AT4G16430 | 44.444 | 234 | 101 | 7 | 397 | 618 | 251 | 467 | 2.20e-51 | 184 |
MS.gene068358.t1 | AT4G16430 | 38.610 | 259 | 136 | 9 | 9 | 260 | 2 | 244 | 8.89e-41 | 155 |
MS.gene068358.t1 | AT5G46760 | 44.954 | 218 | 104 | 5 | 413 | 616 | 369 | 584 | 9.03e-46 | 171 |
MS.gene068358.t1 | AT5G46760 | 36.224 | 196 | 102 | 8 | 51 | 237 | 50 | 231 | 1.00e-20 | 97.1 |
MS.gene068358.t1 | AT4G17880 | 42.254 | 213 | 110 | 4 | 419 | 619 | 373 | 584 | 1.54e-43 | 165 |
MS.gene068358.t1 | AT4G17880 | 32.636 | 239 | 141 | 6 | 12 | 241 | 23 | 250 | 1.94e-24 | 108 |
MS.gene068358.t1 | AT5G46830 | 41.772 | 158 | 86 | 2 | 449 | 600 | 334 | 491 | 1.02e-30 | 126 |
MS.gene068358.t1 | AT5G46830 | 31.489 | 235 | 143 | 6 | 71 | 296 | 49 | 274 | 2.11e-16 | 82.8 |
MS.gene068358.t1 | AT4G09820 | 31.351 | 185 | 113 | 4 | 63 | 241 | 25 | 201 | 1.04e-20 | 96.3 |
MS.gene068358.t1 | AT4G09820 | 48.649 | 74 | 27 | 1 | 438 | 511 | 354 | 416 | 6.21e-14 | 75.1 |
MS.gene068358.t1 | AT5G57150 | 32.796 | 186 | 102 | 5 | 438 | 606 | 40 | 219 | 1.00e-19 | 89.4 |
MS.gene068358.t1 | AT4G00870 | 50.549 | 91 | 35 | 1 | 443 | 523 | 224 | 314 | 1.32e-19 | 92.0 |
MS.gene068358.t1 | AT5G41315 | 30.583 | 206 | 117 | 5 | 51 | 241 | 12 | 206 | 1.77e-19 | 93.2 |
MS.gene068358.t1 | AT5G41315 | 45.070 | 71 | 39 | 0 | 452 | 522 | 435 | 505 | 1.73e-12 | 70.9 |
MS.gene068358.t1 | AT5G41315 | 30.583 | 206 | 117 | 5 | 51 | 241 | 17 | 211 | 1.99e-19 | 92.8 |
MS.gene068358.t1 | AT5G41315 | 45.070 | 71 | 39 | 0 | 452 | 522 | 440 | 510 | 1.78e-12 | 70.9 |
MS.gene068358.t1 | AT5G41315 | 30.583 | 206 | 117 | 5 | 51 | 241 | 20 | 214 | 2.23e-19 | 92.8 |
MS.gene068358.t1 | AT5G41315 | 45.070 | 71 | 39 | 0 | 452 | 522 | 443 | 513 | 1.90e-12 | 70.9 |
MS.gene068358.t1 | AT5G57150 | 32.778 | 180 | 98 | 5 | 438 | 600 | 40 | 213 | 4.64e-19 | 87.0 |
MS.gene068358.t1 | AT5G57150 | 34.591 | 159 | 87 | 4 | 459 | 600 | 56 | 214 | 5.97e-19 | 86.7 |
MS.gene068358.t1 | AT5G57150 | 32.778 | 180 | 98 | 5 | 438 | 600 | 41 | 214 | 6.05e-19 | 86.7 |
MS.gene068358.t1 | AT5G57150 | 33.333 | 159 | 89 | 3 | 459 | 600 | 56 | 214 | 6.72e-19 | 87.4 |
MS.gene068358.t1 | AT1G63650 | 30.097 | 206 | 115 | 7 | 51 | 241 | 11 | 202 | 1.22e-18 | 90.5 |
MS.gene068358.t1 | AT1G63650 | 47.692 | 65 | 34 | 0 | 458 | 522 | 405 | 469 | 3.53e-13 | 73.2 |
MS.gene068358.t1 | AT1G63650 | 30.097 | 206 | 115 | 7 | 51 | 241 | 11 | 202 | 1.22e-18 | 90.5 |
MS.gene068358.t1 | AT1G63650 | 47.692 | 65 | 34 | 0 | 458 | 522 | 405 | 469 | 3.53e-13 | 73.2 |
MS.gene068358.t1 | AT1G63650 | 30.097 | 206 | 115 | 7 | 51 | 241 | 11 | 202 | 1.22e-18 | 90.5 |
MS.gene068358.t1 | AT1G63650 | 47.692 | 65 | 34 | 0 | 458 | 522 | 405 | 469 | 3.53e-13 | 73.2 |
MS.gene068358.t1 | AT4G00480 | 29.082 | 196 | 110 | 5 | 66 | 241 | 31 | 217 | 1.90e-17 | 86.3 |
MS.gene068358.t1 | AT4G00480 | 29.082 | 196 | 110 | 5 | 66 | 241 | 31 | 217 | 2.74e-17 | 85.9 |
MS.gene068358.t1 | AT4G00480 | 29.082 | 196 | 110 | 5 | 66 | 241 | 31 | 217 | 3.92e-17 | 85.5 |
MS.gene068358.t1 | AT4G37850 | 29.648 | 199 | 120 | 3 | 425 | 608 | 119 | 312 | 1.28e-16 | 82.0 |
MS.gene068358.t1 | AT4G37850 | 29.648 | 199 | 120 | 3 | 425 | 608 | 119 | 312 | 1.28e-16 | 82.0 |
MS.gene068358.t1 | AT4G29930 | 29.268 | 164 | 101 | 5 | 442 | 600 | 43 | 196 | 1.52e-15 | 77.0 |
MS.gene068358.t1 | AT4G29930 | 28.994 | 169 | 105 | 5 | 442 | 605 | 43 | 201 | 1.53e-15 | 76.6 |
MS.gene068358.t1 | AT4G29930 | 28.144 | 167 | 112 | 3 | 442 | 605 | 43 | 204 | 2.15e-15 | 76.3 |
MS.gene068358.t1 | AT4G29930 | 58.621 | 58 | 24 | 0 | 460 | 517 | 56 | 113 | 3.88e-14 | 71.6 |
MS.gene068358.t1 | AT4G29930 | 48.684 | 76 | 34 | 1 | 442 | 517 | 43 | 113 | 4.80e-14 | 73.2 |
MS.gene068358.t1 | AT4G29930 | 48.684 | 76 | 34 | 1 | 442 | 517 | 43 | 113 | 4.80e-14 | 73.2 |
MS.gene068358.t1 | AT4G29930 | 48.684 | 76 | 34 | 1 | 442 | 517 | 43 | 113 | 5.30e-14 | 72.8 |
MS.gene068358.t1 | AT2G22750 | 36.111 | 144 | 57 | 4 | 441 | 560 | 137 | 269 | 1.16e-13 | 73.2 |
MS.gene068358.t1 | AT2G22750 | 36.111 | 144 | 57 | 4 | 441 | 560 | 137 | 269 | 1.21e-13 | 73.2 |
MS.gene068358.t1 | AT2G22750 | 36.111 | 144 | 57 | 4 | 441 | 560 | 133 | 265 | 1.23e-13 | 72.8 |
MS.gene068358.t1 | AT2G22750 | 36.111 | 144 | 57 | 4 | 441 | 560 | 109 | 241 | 1.28e-13 | 72.4 |
MS.gene068358.t1 | AT2G22750 | 36.111 | 144 | 57 | 4 | 441 | 560 | 109 | 241 | 1.28e-13 | 72.4 |
MS.gene068358.t1 | AT3G26744 | 37.500 | 120 | 65 | 1 | 456 | 565 | 305 | 424 | 1.30e-13 | 73.9 |
MS.gene068358.t1 | AT3G26744 | 37.500 | 120 | 65 | 1 | 456 | 565 | 305 | 424 | 1.49e-13 | 73.9 |
MS.gene068358.t1 | AT3G26744 | 37.500 | 120 | 65 | 1 | 456 | 565 | 305 | 424 | 1.49e-13 | 73.9 |
MS.gene068358.t1 | AT3G26744 | 37.500 | 120 | 65 | 1 | 456 | 565 | 305 | 424 | 1.49e-13 | 73.9 |
MS.gene068358.t1 | AT1G12860 | 49.333 | 75 | 34 | 1 | 456 | 530 | 265 | 335 | 1.71e-13 | 73.2 |
MS.gene068358.t1 | AT1G12860 | 49.333 | 75 | 34 | 1 | 456 | 530 | 265 | 335 | 2.10e-13 | 73.2 |
MS.gene068358.t1 | AT2G22760 | 33.333 | 117 | 59 | 3 | 459 | 560 | 120 | 232 | 2.52e-13 | 71.6 |
MS.gene068358.t1 | AT2G22760 | 33.333 | 117 | 59 | 3 | 459 | 560 | 120 | 232 | 2.71e-13 | 71.2 |
MS.gene068358.t1 | AT2G16910 | 53.846 | 65 | 29 | 1 | 462 | 526 | 318 | 381 | 3.02e-13 | 73.2 |
MS.gene068358.t1 | AT2G28160 | 30.380 | 158 | 96 | 5 | 462 | 606 | 135 | 291 | 2.34e-12 | 68.9 |
MS.gene068358.t1 | AT2G28160 | 30.380 | 158 | 96 | 5 | 462 | 606 | 135 | 291 | 2.38e-12 | 68.9 |
MS.gene068358.t1 | AT2G22770 | 50.000 | 66 | 30 | 1 | 452 | 514 | 123 | 188 | 4.59e-12 | 68.2 |
MS.gene068358.t1 | AT1G10610 | 26.452 | 155 | 102 | 3 | 459 | 601 | 265 | 419 | 8.11e-11 | 65.1 |
Find 119 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGGAAAAGGAACAGAATT+TGG | 0.212083 | 8.3:-66751358 | MS.gene068358:CDS |
CTATAAGGAGTTGGTTTCTT+TGG | 0.221769 | 8.3:+66749811 | None:intergenic |
GATGATGACAATTATGCTTT+TGG | 0.241708 | 8.3:-66751249 | MS.gene068358:CDS |
GTAGCTCTGATTATTGTGTT+AGG | 0.270853 | 8.3:-66751092 | MS.gene068358:CDS |
CTGATGTTGAAGCTTCTTGC+AGG | 0.272050 | 8.3:-66750393 | MS.gene068358:CDS |
GGTTCTACCCTTCCATTTGC+TGG | 0.277893 | 8.3:+66750316 | None:intergenic |
ATGAAGATTGAAGTGGGTTT+AGG | 0.280941 | 8.3:-66751660 | MS.gene068358:CDS |
GAAACTTGCTATTAGGAAAA+TGG | 0.287769 | 8.3:-66750704 | MS.gene068358:CDS |
TTCGGGAGAAACTTGCTATT+AGG | 0.295924 | 8.3:-66750711 | MS.gene068358:CDS |
AAGTGGGTTTAGGAGGAAAT+AGG | 0.302141 | 8.3:-66751650 | MS.gene068358:CDS |
CGAATTTCTCAGTCAAAGTT+TGG | 0.303426 | 8.3:-66751429 | MS.gene068358:CDS |
TGATTTAGGTGTTGTTGAAT+TGG | 0.318577 | 8.3:-66751019 | MS.gene068358:CDS |
TTGTCCATCTTGGAAATATT+CGG | 0.320643 | 8.3:+66750217 | None:intergenic |
GAGGAAAAGGAACAGAATTT+GGG | 0.321673 | 8.3:-66751357 | MS.gene068358:CDS |
CCAACTTTCAAACAAGAAAA+AGG | 0.322553 | 8.3:+66750868 | None:intergenic |
CAAAGATGCTTTGTCCATCT+TGG | 0.334458 | 8.3:+66750207 | None:intergenic |
CGACTCAACGATATCGATTT+CGG | 0.339702 | 8.3:+66749931 | None:intergenic |
CTTGAACCCTGAACACCATT+TGG | 0.342953 | 8.3:+66750631 | None:intergenic |
CAGAAGCTTCATGCGACATT+TGG | 0.343871 | 8.3:-66751279 | MS.gene068358:CDS |
TCAGTCAAAGTTTGGTGATT+GGG | 0.345613 | 8.3:-66751421 | MS.gene068358:CDS |
GTTTAGGAGGAAATAGGTTA+TGG | 0.348725 | 8.3:-66751644 | MS.gene068358:CDS |
CAAATCCTGCCCGAAAATCT+TGG | 0.349356 | 8.3:+66750750 | None:intergenic |
GTTGGGGAGATGGGTGTTGT+AGG | 0.351229 | 8.3:-66751392 | MS.gene068358:CDS |
TAGCTCTGATTATTGTGTTA+GGG | 0.371392 | 8.3:-66751091 | MS.gene068358:CDS |
CTCAGTCAAAGTTTGGTGAT+TGG | 0.372558 | 8.3:-66751422 | MS.gene068358:CDS |
TTTCGGTGTCTTTGAATGAT+TGG | 0.372935 | 8.3:+66749948 | None:intergenic |
CCTGGTCCACCATGTCCATT+AGG | 0.373360 | 8.3:+66751168 | None:intergenic |
GGCTTTCTGCCACGTTTCCT+TGG | 0.373396 | 8.3:+66750337 | None:intergenic |
AAGAATAATAGTAATAATAA+TGG | 0.375879 | 8.3:-66750835 | MS.gene068358:CDS |
GAATATGAACTATGGCTATA+AGG | 0.379179 | 8.3:+66749796 | None:intergenic |
ATGGACAAAGCATCTTTGTT+AGG | 0.382051 | 8.3:-66750202 | MS.gene068358:CDS |
GATTTAGGTGTTGTTGAATT+GGG | 0.403406 | 8.3:-66751018 | MS.gene068358:CDS |
CTCTGCCTCCACATGATTGA+GGG | 0.404175 | 8.3:+66750294 | None:intergenic |
CCTCACACCGTTTGCTAGCT+CGG | 0.409915 | 8.3:+66750531 | None:intergenic |
GAATCCGAGAGAGAGCAATT+AGG | 0.414650 | 8.3:-66750130 | MS.gene068358:CDS |
TCTCTGCCTCCACATGATTG+AGG | 0.421326 | 8.3:+66750293 | None:intergenic |
CATAGTAGAGTTGAGGGGAT+TGG | 0.428756 | 8.3:-66750778 | MS.gene068358:CDS |
GCAGCTTGAATATCGATATC+AGG | 0.436804 | 8.3:+66750034 | None:intergenic |
TTGCATCTGGGAAGCATTTG+TGG | 0.438927 | 8.3:-66751137 | MS.gene068358:CDS |
CAACACAATCATCGTTTGCT+AGG | 0.442496 | 8.3:-66750936 | MS.gene068358:CDS |
GAGATCAATTGTTGGTGAAT+CGG | 0.451925 | 8.3:-66750422 | MS.gene068358:CDS |
TTGGGTTCTGTTAGAACGGT+TGG | 0.453833 | 8.3:-66751000 | MS.gene068358:CDS |
AAATCCTGCCCGAAAATCTT+GGG | 0.454281 | 8.3:+66750751 | None:intergenic |
ATCCTAGTCCCTCCGATGAT+AGG | 0.458410 | 8.3:-66750363 | MS.gene068358:CDS |
AATAATCATAGTAGAGTTGA+GGG | 0.462171 | 8.3:-66750784 | MS.gene068358:CDS |
CCTAATGGACATGGTGGACC+AGG | 0.463512 | 8.3:-66751168 | MS.gene068358:CDS |
GGTTAAGTCGATTTCATCGT+TGG | 0.463827 | 8.3:-66750914 | MS.gene068358:CDS |
AAGCTTCATGCGACATTTGG+TGG | 0.467090 | 8.3:-66751276 | MS.gene068358:CDS |
CGTGGCAGAAAGCCAGCAAA+TGG | 0.467789 | 8.3:-66750328 | MS.gene068358:CDS |
CTATTAGGAAAATGGATGAT+AGG | 0.467799 | 8.3:-66750696 | MS.gene068358:CDS |
CATGGGGAGGCCGTCCGAAT+GGG | 0.483663 | 8.3:-66750669 | MS.gene068358:CDS |
GAACTATGGCTATAAGGAGT+TGG | 0.485125 | 8.3:+66749802 | None:intergenic |
CTAACGTTTCGAATTTCAGT+TGG | 0.492616 | 8.3:-66751470 | MS.gene068358:CDS |
AAATGGATGATAGGCAATCA+TGG | 0.495557 | 8.3:-66750687 | MS.gene068358:CDS |
CTCCTATCATCGGAGGGACT+AGG | 0.496928 | 8.3:+66750361 | None:intergenic |
CCTTCAGTGAGATCAATTGT+TGG | 0.497365 | 8.3:-66750430 | MS.gene068358:CDS |
GGAGGCCGTCCGAATGGGAA+TGG | 0.498948 | 8.3:-66750664 | MS.gene068358:CDS |
AAGATTGAAGTGGGTTTAGG+AGG | 0.500123 | 8.3:-66751657 | MS.gene068358:CDS |
TTTCCTTGGCCTCCTATCAT+CGG | 0.501052 | 8.3:+66750351 | None:intergenic |
AAACTAATTCCATTCCCATT+CGG | 0.503424 | 8.3:+66750655 | None:intergenic |
TGATGTTGAAGCTTCTTGCA+GGG | 0.510338 | 8.3:-66750392 | MS.gene068358:CDS |
GGAACCTAAAGAGGAGGAAA+AGG | 0.510397 | 8.3:-66751370 | MS.gene068358:CDS |
TCATGGGGAGGCCGTCCGAA+TGG | 0.512768 | 8.3:-66750670 | MS.gene068358:CDS |
AACACAATCATCGTTTGCTA+GGG | 0.513978 | 8.3:-66750935 | MS.gene068358:CDS |
CTTCTCCTTTGTCAGCTGCT+CGG | 0.521163 | 8.3:+66749850 | None:intergenic |
TTGGGGAGATGGGTGTTGTA+GGG | 0.522649 | 8.3:-66751391 | MS.gene068358:CDS |
GCATTGCTCGATGAAGGCCT+AGG | 0.524340 | 8.3:+66750556 | None:intergenic |
GATTCCTAATTGCTCTCTCT+CGG | 0.526835 | 8.3:+66750126 | None:intergenic |
TTAGGAATCGCTTCTAGAGA+TGG | 0.528320 | 8.3:-66750112 | MS.gene068358:CDS |
GATATTCAAGCTGCACAAGA+TGG | 0.542476 | 8.3:-66750025 | MS.gene068358:CDS |
CCAGATGCAAAACACTTACC+TGG | 0.548160 | 8.3:+66751150 | None:intergenic |
TCGGCTGCATTGCTCGATGA+AGG | 0.551061 | 8.3:+66750550 | None:intergenic |
AATGGATGATAGGCAATCAT+GGG | 0.552039 | 8.3:-66750686 | MS.gene068358:CDS |
AAGTCGATTTCATCGTTGGA+TGG | 0.552935 | 8.3:-66750910 | MS.gene068358:CDS |
AATGCAGCCGAGCTAGCAAA+CGG | 0.553113 | 8.3:-66750538 | MS.gene068358:CDS |
CCGAGCTAGCAAACGGTGTG+AGG | 0.554145 | 8.3:-66750531 | MS.gene068358:CDS |
TGTGCCGAATATTTCCAAGA+TGG | 0.560772 | 8.3:-66750221 | MS.gene068358:CDS |
ATTGGACCGTGTGACCGATA+CGG | 0.561637 | 8.3:-66751226 | MS.gene068358:CDS |
CTTGGCCTCCTATCATCGGA+GGG | 0.566577 | 8.3:+66750355 | None:intergenic |
GCAGAAAGCCAGCAAATGGA+AGG | 0.566807 | 8.3:-66750324 | MS.gene068358:CDS |
CCTTGGCCTCCTATCATCGG+AGG | 0.567260 | 8.3:+66750354 | None:intergenic |
TAATAATCATAGTAGAGTTG+AGG | 0.568424 | 8.3:-66750785 | MS.gene068358:CDS |
TTCTAGAGATGGATCATCAT+CGG | 0.575066 | 8.3:-66750101 | MS.gene068358:CDS |
TTGAGGATGAAGATTGAAGT+GGG | 0.584907 | 8.3:-66751666 | None:intergenic |
CTAGTCCCTCCGATGATAGG+AGG | 0.585538 | 8.3:-66750360 | MS.gene068358:CDS |
TTTCGGGCAGGATTTGAACT+CGG | 0.588089 | 8.3:-66750743 | MS.gene068358:CDS |
ATGGTGTTCAGGGTTCAAGT+TGG | 0.593722 | 8.3:-66750627 | MS.gene068358:CDS |
TCTGCCTCCACATGATTGAG+GGG | 0.599597 | 8.3:+66750295 | None:intergenic |
GTGTTGTAGGGAACCTAAAG+AGG | 0.602831 | 8.3:-66751379 | MS.gene068358:CDS |
TAATTCCATTCCCATTCGGA+CGG | 0.603735 | 8.3:+66750659 | None:intergenic |
AAGAAAGAACATCTCCGTAT+CGG | 0.609322 | 8.3:+66751212 | None:intergenic |
TGAATTGGGTTCTGTTAGAA+CGG | 0.609474 | 8.3:-66751004 | MS.gene068358:CDS |
TCAACAACACCTAAATCAGT+AGG | 0.611590 | 8.3:+66751024 | None:intergenic |
CCTCCGATGATAGGAGGCCA+AGG | 0.615234 | 8.3:-66750354 | MS.gene068358:CDS |
AGGTTCCGAGCAGCTGACAA+AGG | 0.619745 | 8.3:-66749855 | MS.gene068358:CDS |
GTTCAGGGTTCAAGTTGGAG+AGG | 0.625845 | 8.3:-66750622 | MS.gene068358:CDS |
ACAAGATGGAGTTATCGTAA+AGG | 0.628284 | 8.3:-66750011 | MS.gene068358:CDS |
CCAACAATTGATCTCACTGA+AGG | 0.629626 | 8.3:+66750430 | None:intergenic |
TCAAGCAAAACTCAAGACGA+TGG | 0.633732 | 8.3:-66750152 | MS.gene068358:CDS |
AAGCTCGTTGATGTAAGCAA+TGG | 0.643072 | 8.3:+66750174 | None:intergenic |
AAGTTTCTCCCGAAAATGTG+TGG | 0.644313 | 8.3:+66750720 | None:intergenic |
GGTAGAACCCCTCAATCATG+TGG | 0.644553 | 8.3:-66750302 | MS.gene068358:CDS |
GTGACTTAATTATGAATGTG+TGG | 0.646250 | 8.3:+66749879 | None:intergenic |
AGGAAAAGGAACAGAATTTG+GGG | 0.646477 | 8.3:-66751356 | MS.gene068358:CDS |
ACATCTCCGTATCGGTCACA+CGG | 0.649933 | 8.3:+66751220 | None:intergenic |
GATAGGAGGCCAAGGAAACG+TGG | 0.651587 | 8.3:-66750346 | MS.gene068358:CDS |
TTTGAGGATGAAGATTGAAG+TGG | 0.652782 | 8.3:-66751667 | None:intergenic |
TCAACAACTATCAACAGCAA+CGG | 0.665554 | 8.3:-66750495 | MS.gene068358:CDS |
GGAGAGGTAGTCAAGTTGTG+AGG | 0.666503 | 8.3:-66750606 | MS.gene068358:CDS |
TTGTAGGGAACCTAAAGAGG+AGG | 0.672145 | 8.3:-66751376 | MS.gene068358:CDS |
TGTTGAAGCTTCTTGCAGGG+AGG | 0.673213 | 8.3:-66750389 | MS.gene068358:CDS |
TCAATCATGTGGAGGCAGAG+AGG | 0.677489 | 8.3:-66750291 | MS.gene068358:CDS |
AGAACCCCTCAATCATGTGG+AGG | 0.677611 | 8.3:-66750299 | MS.gene068358:CDS |
GATGATAGGCAATCATGGGG+AGG | 0.677666 | 8.3:-66750682 | MS.gene068358:CDS |
CAGAAAGCCAGCAAATGGAA+GGG | 0.688128 | 8.3:-66750323 | MS.gene068358:CDS |
ACATTCATAATTAAGTCACA+AGG | 0.691255 | 8.3:-66749875 | MS.gene068358:CDS |
TCTCACTGAAGGTCTCGATG+TGG | 0.695158 | 8.3:+66750441 | None:intergenic |
ATGGATGATAGGCAATCATG+GGG | 0.703008 | 8.3:-66750685 | MS.gene068358:CDS |
ATAATCATAGTAGAGTTGAG+GGG | 0.723398 | 8.3:-66750783 | MS.gene068358:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGAATAATAGTAATAATAA+TGG | - | chr8.3:66750636-66750655 | MS.gene068358:CDS | 10.0% |
!!! | TGTTAATGCTTTTGATTATT+TGG | - | chr8.3:66749888-66749907 | MS.gene068358:CDS | 20.0% |
! | AATAATCATAGTAGAGTTGA+GGG | - | chr8.3:66750687-66750706 | MS.gene068358:CDS | 25.0% |
! | ACATTCATAATTAAGTCACA+AGG | - | chr8.3:66751596-66751615 | MS.gene068358:CDS | 25.0% |
! | ATGAAAAACAACAAAGAATG+AGG | - | chr8.3:66750157-66750176 | MS.gene068358:CDS | 25.0% |
! | GAAAAATCAATTTGCATTTG+TGG | + | chr8.3:66751005-66751024 | None:intergenic | 25.0% |
! | TAATAATCATAGTAGAGTTG+AGG | - | chr8.3:66750686-66750705 | MS.gene068358:CDS | 25.0% |
!! | ATGTATTTCTCTTTTCCTAA+TGG | - | chr8.3:66750288-66750307 | MS.gene068358:CDS | 25.0% |
!!! | AATGGAATTAGTTTTCCAAA+TGG | - | chr8.3:66750825-66750844 | MS.gene068358:CDS | 25.0% |
!!! | CAAATGCAAATTGATTTTTC+AGG | - | chr8.3:66751005-66751024 | MS.gene068358:CDS | 25.0% |
!!! | CTTTTTCTTGTTTGAAAGTT+GGG | - | chr8.3:66750604-66750623 | MS.gene068358:CDS | 25.0% |
!!! | TTTTTCTTGTTTGAAAGTTG+GGG | - | chr8.3:66750605-66750624 | MS.gene068358:CDS | 25.0% |
AAACTAATTCCATTCCCATT+CGG | + | chr8.3:66750819-66750838 | None:intergenic | 30.0% | |
ATAATCATAGTAGAGTTGAG+GGG | - | chr8.3:66750688-66750707 | MS.gene068358:CDS | 30.0% | |
CCAACTTTCAAACAAGAAAA+AGG | + | chr8.3:66750606-66750625 | None:intergenic | 30.0% | |
CTATTAGGAAAATGGATGAT+AGG | - | chr8.3:66750775-66750794 | MS.gene068358:CDS | 30.0% | |
GAATGAAGATGAAAAAGCTA+TGG | - | chr8.3:66749849-66749868 | MS.gene068358:CDS | 30.0% | |
GTGACTTAATTATGAATGTG+TGG | + | chr8.3:66751595-66751614 | None:intergenic | 30.0% | |
TTGTCCATCTTGGAAATATT+CGG | + | chr8.3:66751257-66751276 | None:intergenic | 30.0% | |
! | AGAATCTTTTGACAGCAATT+GGG | - | chr8.3:66749932-66749951 | MS.gene068358:CDS | 30.0% |
! | GATGATGACAATTATGCTTT+TGG | - | chr8.3:66750222-66750241 | MS.gene068358:CDS | 30.0% |
! | TGACAATTATGCTTTTGGAT+TGG | - | chr8.3:66750227-66750246 | MS.gene068358:CDS | 30.0% |
!! | CCTTTTTCTTGTTTGAAAGT+TGG | - | chr8.3:66750603-66750622 | MS.gene068358:CDS | 30.0% |
!! | GAAACTTGCTATTAGGAAAA+TGG | - | chr8.3:66750767-66750786 | MS.gene068358:CDS | 30.0% |
!! | GATTTAGGTGTTGTTGAATT+GGG | - | chr8.3:66750453-66750472 | MS.gene068358:CDS | 30.0% |
!! | TAGCTCTGATTATTGTGTTA+GGG | - | chr8.3:66750380-66750399 | MS.gene068358:CDS | 30.0% |
!! | TGATTTAGGTGTTGTTGAAT+TGG | - | chr8.3:66750452-66750471 | MS.gene068358:CDS | 30.0% |
!!! | GTTGGAATTATGCGATTTTT+TGG | - | chr8.3:66750019-66750038 | MS.gene068358:CDS | 30.0% |
!!! | GTTTTAGTTCCTACTGATTT+AGG | - | chr8.3:66750438-66750457 | MS.gene068358:CDS | 30.0% |
!!! | TTATTGTGTTAGGGCTTTTT+TGG | - | chr8.3:66750389-66750408 | MS.gene068358:CDS | 30.0% |
AAATGGATGATAGGCAATCA+TGG | - | chr8.3:66750784-66750803 | MS.gene068358:CDS | 35.0% | |
AAGAAAGAACATCTCCGTAT+CGG | + | chr8.3:66750262-66750281 | None:intergenic | 35.0% | |
AATGGATGATAGGCAATCAT+GGG | - | chr8.3:66750785-66750804 | MS.gene068358:CDS | 35.0% | |
ACAAGATGGAGTTATCGTAA+AGG | - | chr8.3:66751460-66751479 | MS.gene068358:CDS | 35.0% | |
AGGAAAAGGAACAGAATTTG+GGG | - | chr8.3:66750115-66750134 | MS.gene068358:CDS | 35.0% | |
CGAATTTCTCAGTCAAAGTT+TGG | - | chr8.3:66750042-66750061 | MS.gene068358:CDS | 35.0% | |
CTAACGTTTCGAATTTCAGT+TGG | - | chr8.3:66750001-66750020 | MS.gene068358:CDS | 35.0% | |
GAGGAAAAGGAACAGAATTT+GGG | - | chr8.3:66750114-66750133 | MS.gene068358:CDS | 35.0% | |
GTTTAGGAGGAAATAGGTTA+TGG | - | chr8.3:66749827-66749846 | MS.gene068358:CDS | 35.0% | |
TCAACAACACCTAAATCAGT+AGG | + | chr8.3:66750450-66750469 | None:intergenic | 35.0% | |
TCAACAACTATCAACAGCAA+CGG | - | chr8.3:66750976-66750995 | MS.gene068358:CDS | 35.0% | |
TGAAGATGAAAAAGCTATGG+TGG | - | chr8.3:66749852-66749871 | MS.gene068358:CDS | 35.0% | |
TGAATTGGGTTCTGTTAGAA+CGG | - | chr8.3:66750467-66750486 | MS.gene068358:CDS | 35.0% | |
! | AACACAATCATCGTTTGCTA+GGG | - | chr8.3:66750536-66750555 | MS.gene068358:CDS | 35.0% |
! | AGTTTTCCAAATGGTGTTCA+GGG | - | chr8.3:66750834-66750853 | MS.gene068358:CDS | 35.0% |
! | ATGAAGATTGAAGTGGGTTT+AGG | - | chr8.3:66749811-66749830 | MS.gene068358:CDS | 35.0% |
! | ATGGACAAAGCATCTTTGTT+AGG | - | chr8.3:66751269-66751288 | MS.gene068358:CDS | 35.0% |
! | ATTGGAGTTCCCAAGATTTT+CGG | - | chr8.3:66750711-66750730 | MS.gene068358:CDS | 35.0% |
! | CTATAAGGAGTTGGTTTCTT+TGG | + | chr8.3:66751663-66751682 | None:intergenic | 35.0% |
! | GAGAATCTTTTGACAGCAAT+TGG | - | chr8.3:66749931-66749950 | MS.gene068358:CDS | 35.0% |
! | GAGATCAATTGTTGGTGAAT+CGG | - | chr8.3:66751049-66751068 | MS.gene068358:CDS | 35.0% |
! | TAGTTTTCCAAATGGTGTTC+AGG | - | chr8.3:66750833-66750852 | MS.gene068358:CDS | 35.0% |
! | TCAGTCAAAGTTTGGTGATT+GGG | - | chr8.3:66750050-66750069 | MS.gene068358:CDS | 35.0% |
! | TTCTAGAGATGGATCATCAT+CGG | - | chr8.3:66751370-66751389 | MS.gene068358:CDS | 35.0% |
!! | AAGTTTGGTGATTGGGTTTT+AGG | - | chr8.3:66750057-66750076 | MS.gene068358:CDS | 35.0% |
!! | GTAGCTCTGATTATTGTGTT+AGG | - | chr8.3:66750379-66750398 | MS.gene068358:CDS | 35.0% |
!! | TTCTCTTTTCCTAATGGACA+TGG | - | chr8.3:66750294-66750313 | MS.gene068358:CDS | 35.0% |
!! | TTTCGGTGTCTTTGAATGAT+TGG | + | chr8.3:66751526-66751545 | None:intergenic | 35.0% |
!!! | GATTGGACGAGTTTTGAAAT+AGG | + | chr8.3:66751509-66751528 | None:intergenic | 35.0% |
!!! | GCTTTTTTGGCTAAATCTGT+TGG | - | chr8.3:66750402-66750421 | MS.gene068358:CDS | 35.0% |
AAATCCTGCCCGAAAATCTT+GGG | + | chr8.3:66750723-66750742 | None:intergenic | 40.0% | |
AAGCTCGTTGATGTAAGCAA+TGG | + | chr8.3:66751300-66751319 | None:intergenic | 40.0% | |
AAGTTTCTCCCGAAAATGTG+TGG | + | chr8.3:66750754-66750773 | None:intergenic | 40.0% | |
ATGGATGATAGGCAATCATG+GGG | - | chr8.3:66750786-66750805 | MS.gene068358:CDS | 40.0% | |
CAAAGATGCTTTGTCCATCT+TGG | + | chr8.3:66751267-66751286 | None:intergenic | 40.0% | |
CAACACAATCATCGTTTGCT+AGG | - | chr8.3:66750535-66750554 | MS.gene068358:CDS | 40.0% | |
CCAACAATTGATCTCACTGA+AGG | + | chr8.3:66751044-66751063 | None:intergenic | 40.0% | |
CCTTCAGTGAGATCAATTGT+TGG | - | chr8.3:66751041-66751060 | MS.gene068358:CDS | 40.0% | |
GATATTCAAGCTGCACAAGA+TGG | - | chr8.3:66751446-66751465 | MS.gene068358:CDS | 40.0% | |
GATTCCTAATTGCTCTCTCT+CGG | + | chr8.3:66751348-66751367 | None:intergenic | 40.0% | |
GCAGCTTGAATATCGATATC+AGG | + | chr8.3:66751440-66751459 | None:intergenic | 40.0% | |
GGAGGAAAAGGAACAGAATT+TGG | - | chr8.3:66750113-66750132 | MS.gene068358:CDS | 40.0% | |
TAATTCCATTCCCATTCGGA+CGG | + | chr8.3:66750815-66750834 | None:intergenic | 40.0% | |
TCAAGCAAAACTCAAGACGA+TGG | - | chr8.3:66751319-66751338 | MS.gene068358:CDS | 40.0% | |
TGATGTTGAAGCTTCTTGCA+GGG | - | chr8.3:66751079-66751098 | MS.gene068358:CDS | 40.0% | |
TGTGCCGAATATTTCCAAGA+TGG | - | chr8.3:66751250-66751269 | MS.gene068358:CDS | 40.0% | |
! | AAGATTGAAGTGGGTTTAGG+AGG | - | chr8.3:66749814-66749833 | MS.gene068358:CDS | 40.0% |
! | AAGTCGATTTCATCGTTGGA+TGG | - | chr8.3:66750561-66750580 | MS.gene068358:CDS | 40.0% |
! | AAGTGGGTTTAGGAGGAAAT+AGG | - | chr8.3:66749821-66749840 | MS.gene068358:CDS | 40.0% |
! | CAGGTAAGTGTTTTGCATCT+GGG | - | chr8.3:66750322-66750341 | MS.gene068358:CDS | 40.0% |
! | CTCAGTCAAAGTTTGGTGAT+TGG | - | chr8.3:66750049-66750068 | MS.gene068358:CDS | 40.0% |
! | GCTATGGTGGTTGAAGTTTT+AGG | - | chr8.3:66749865-66749884 | MS.gene068358:CDS | 40.0% |
! | GGTTAAGTCGATTTCATCGT+TGG | - | chr8.3:66750557-66750576 | MS.gene068358:CDS | 40.0% |
! | TGTTCCTTTTCCTCCTCTTT+AGG | + | chr8.3:66750108-66750127 | None:intergenic | 40.0% |
! | TTAGGAATCGCTTCTAGAGA+TGG | - | chr8.3:66751359-66751378 | MS.gene068358:CDS | 40.0% |
! | TTGGAGTTCCCAAGATTTTC+GGG | - | chr8.3:66750712-66750731 | MS.gene068358:CDS | 40.0% |
!! | CGACTCAACGATATCGATTT+CGG | + | chr8.3:66751543-66751562 | None:intergenic | 40.0% |
!! | TCTTTTCCTAATGGACATGG+TGG | - | chr8.3:66750297-66750316 | MS.gene068358:CDS | 40.0% |
!! | TTCGGGAGAAACTTGCTATT+AGG | - | chr8.3:66750760-66750779 | MS.gene068358:CDS | 40.0% |
!!! | TGGTGATTGGGTTTTAGGTT+GGG | - | chr8.3:66750062-66750081 | MS.gene068358:CDS | 40.0% |
!!! | TTGGTGATTGGGTTTTAGGT+TGG | - | chr8.3:66750061-66750080 | MS.gene068358:CDS | 40.0% |
!!! | TTTTCTGCTCTAGAGTTTGC+TGG | + | chr8.3:66751401-66751420 | None:intergenic | 40.0% |
AAGCTTCATGCGACATTTGG+TGG | - | chr8.3:66750195-66750214 | MS.gene068358:CDS | 45.0% | |
ATGGTGTTCAGGGTTCAAGT+TGG | - | chr8.3:66750844-66750863 | MS.gene068358:CDS | 45.0% | |
CAAATCCTGCCCGAAAATCT+TGG | + | chr8.3:66750724-66750743 | None:intergenic | 45.0% | |
CAGAAAGCCAGCAAATGGAA+GGG | - | chr8.3:66751148-66751167 | MS.gene068358:CDS | 45.0% | |
CAGAAGCTTCATGCGACATT+TGG | - | chr8.3:66750192-66750211 | MS.gene068358:CDS | 45.0% | |
CATAGTAGAGTTGAGGGGAT+TGG | - | chr8.3:66750693-66750712 | MS.gene068358:CDS | 45.0% | |
CCAGATGCAAAACACTTACC+TGG | + | chr8.3:66750324-66750343 | None:intergenic | 45.0% | |
CTAGGAGCAAAAACATCGAC+AGG | + | chr8.3:66750900-66750919 | None:intergenic | 45.0% | |
CTCGTAATGCGTAAAAACGC+TGG | + | chr8.3:66751226-66751245 | None:intergenic | 45.0% | |
CTGATGTTGAAGCTTCTTGC+AGG | - | chr8.3:66751078-66751097 | MS.gene068358:CDS | 45.0% | |
CTTGAACCCTGAACACCATT+TGG | + | chr8.3:66750843-66750862 | None:intergenic | 45.0% | |
GAATCCGAGAGAGAGCAATT+AGG | - | chr8.3:66751341-66751360 | MS.gene068358:CDS | 45.0% | |
GGAACCTAAAGAGGAGGAAA+AGG | - | chr8.3:66750101-66750120 | MS.gene068358:CDS | 45.0% | |
GTGTTGTAGGGAACCTAAAG+AGG | - | chr8.3:66750092-66750111 | MS.gene068358:CDS | 45.0% | |
TTGGGTTCTGTTAGAACGGT+TGG | - | chr8.3:66750471-66750490 | MS.gene068358:CDS | 45.0% | |
TTGTAGGGAACCTAAAGAGG+AGG | - | chr8.3:66750095-66750114 | MS.gene068358:CDS | 45.0% | |
TTTCCTTGGCCTCCTATCAT+CGG | + | chr8.3:66751123-66751142 | None:intergenic | 45.0% | |
TTTCGGGCAGGATTTGAACT+CGG | - | chr8.3:66750728-66750747 | MS.gene068358:CDS | 45.0% | |
! | CCAGGTAAGTGTTTTGCATC+TGG | - | chr8.3:66750321-66750340 | MS.gene068358:CDS | 45.0% |
! | CTTTTGACAGCAATTGGGAG+TGG | - | chr8.3:66749937-66749956 | MS.gene068358:CDS | 45.0% |
! | TGAACTCGGCCACACATTTT+CGG | - | chr8.3:66750742-66750761 | MS.gene068358:CDS | 45.0% |
!! | CTGTCGATGTTTTTGCTCCT+AGG | - | chr8.3:66750898-66750917 | MS.gene068358:CDS | 45.0% |
!! | TTGCATCTGGGAAGCATTTG+TGG | - | chr8.3:66750334-66750353 | MS.gene068358:CDS | 45.0% |
!!! | GGTGATTGGGTTTTAGGTTG+GGG | - | chr8.3:66750063-66750082 | MS.gene068358:CDS | 45.0% |
AATGCAGCCGAGCTAGCAAA+CGG | - | chr8.3:66750933-66750952 | MS.gene068358:CDS | 50.0% | |
AGAACCCCTCAATCATGTGG+AGG | - | chr8.3:66751172-66751191 | MS.gene068358:CDS | 50.0% | |
ATCCTAGTCCCTCCGATGAT+AGG | - | chr8.3:66751108-66751127 | MS.gene068358:CDS | 50.0% | |
ATTGGACCGTGTGACCGATA+CGG | - | chr8.3:66750245-66750264 | MS.gene068358:CDS | 50.0% | |
CTCTGCCTCCACATGATTGA+GGG | + | chr8.3:66751180-66751199 | None:intergenic | 50.0% | |
CTTCTCCTTTGTCAGCTGCT+CGG | + | chr8.3:66751624-66751643 | None:intergenic | 50.0% | |
GATGATAGGCAATCATGGGG+AGG | - | chr8.3:66750789-66750808 | MS.gene068358:CDS | 50.0% | |
GCAGAAAGCCAGCAAATGGA+AGG | - | chr8.3:66751147-66751166 | MS.gene068358:CDS | 50.0% | |
GGTAGAACCCCTCAATCATG+TGG | - | chr8.3:66751169-66751188 | MS.gene068358:CDS | 50.0% | |
GGTTCTACCCTTCCATTTGC+TGG | + | chr8.3:66751158-66751177 | None:intergenic | 50.0% | |
TCAATCATGTGGAGGCAGAG+AGG | - | chr8.3:66751180-66751199 | MS.gene068358:CDS | 50.0% | |
TCTCACTGAAGGTCTCGATG+TGG | + | chr8.3:66751033-66751052 | None:intergenic | 50.0% | |
TCTCTGCCTCCACATGATTG+AGG | + | chr8.3:66751181-66751200 | None:intergenic | 50.0% | |
TCTGCCTCCACATGATTGAG+GGG | + | chr8.3:66751179-66751198 | None:intergenic | 50.0% | |
TGTTGAAGCTTCTTGCAGGG+AGG | - | chr8.3:66751082-66751101 | MS.gene068358:CDS | 50.0% | |
! | ACATCTCCGTATCGGTCACA+CGG | + | chr8.3:66750254-66750273 | None:intergenic | 50.0% |
! | GAACTCGGCCACACATTTTC+GGG | - | chr8.3:66750743-66750762 | MS.gene068358:CDS | 50.0% |
! | GGAGAGGTAGTCAAGTTGTG+AGG | - | chr8.3:66750865-66750884 | MS.gene068358:CDS | 50.0% |
! | TTGGGGAGATGGGTGTTGTA+GGG | - | chr8.3:66750080-66750099 | MS.gene068358:CDS | 50.0% |
!! | AGTTCCCAAGATTTTCGGGC+AGG | - | chr8.3:66750716-66750735 | MS.gene068358:CDS | 50.0% |
!! | GTTCAGGGTTCAAGTTGGAG+AGG | - | chr8.3:66750849-66750868 | MS.gene068358:CDS | 50.0% |
!!! | GGGTTTTAGGTTGGGGAGAT+GGG | - | chr8.3:66750070-66750089 | MS.gene068358:CDS | 50.0% |
!!! | TGGGTTTTAGGTTGGGGAGA+TGG | - | chr8.3:66750069-66750088 | MS.gene068358:CDS | 50.0% |
AGGTTCCGAGCAGCTGACAA+AGG | - | chr8.3:66751616-66751635 | MS.gene068358:CDS | 55.0% | |
CCTGGTCCACCATGTCCATT+AGG | + | chr8.3:66750306-66750325 | None:intergenic | 55.0% | |
CGTGGCAGAAAGCCAGCAAA+TGG | - | chr8.3:66751143-66751162 | MS.gene068358:CDS | 55.0% | |
CTAGTCCCTCCGATGATAGG+AGG | - | chr8.3:66751111-66751130 | MS.gene068358:CDS | 55.0% | |
CTCCTATCATCGGAGGGACT+AGG | + | chr8.3:66751113-66751132 | None:intergenic | 55.0% | |
CTTGGCCTCCTATCATCGGA+GGG | + | chr8.3:66751119-66751138 | None:intergenic | 55.0% | |
GATAGGAGGCCAAGGAAACG+TGG | - | chr8.3:66751125-66751144 | MS.gene068358:CDS | 55.0% | |
GCATTGCTCGATGAAGGCCT+AGG | + | chr8.3:66750918-66750937 | None:intergenic | 55.0% | |
GGCTTTCTGCCACGTTTCCT+TGG | + | chr8.3:66751137-66751156 | None:intergenic | 55.0% | |
TCGGCTGCATTGCTCGATGA+AGG | + | chr8.3:66750924-66750943 | None:intergenic | 55.0% | |
! | CCTCACACCGTTTGCTAGCT+CGG | + | chr8.3:66750943-66750962 | None:intergenic | 55.0% |
! | GTTGGGGAGATGGGTGTTGT+AGG | - | chr8.3:66750079-66750098 | MS.gene068358:CDS | 55.0% |
!! | CCTAATGGACATGGTGGACC+AGG | - | chr8.3:66750303-66750322 | MS.gene068358:CDS | 55.0% |
CCGAGCTAGCAAACGGTGTG+AGG | - | chr8.3:66750940-66750959 | MS.gene068358:CDS | 60.0% | |
CCTCCGATGATAGGAGGCCA+AGG | - | chr8.3:66751117-66751136 | MS.gene068358:CDS | 60.0% | |
CCTTGGCCTCCTATCATCGG+AGG | + | chr8.3:66751120-66751139 | None:intergenic | 60.0% | |
CATGGGGAGGCCGTCCGAAT+GGG | - | chr8.3:66750802-66750821 | MS.gene068358:CDS | 65.0% | |
GGAGGCCGTCCGAATGGGAA+TGG | - | chr8.3:66750807-66750826 | MS.gene068358:CDS | 65.0% | |
TCATGGGGAGGCCGTCCGAA+TGG | - | chr8.3:66750801-66750820 | MS.gene068358:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 66749811 | 66751682 | 66749811 | ID=MS.gene068358 |
chr8.3 | mRNA | 66749811 | 66751682 | 66749811 | ID=MS.gene068358.t1;Parent=MS.gene068358 |
chr8.3 | exon | 66749811 | 66751682 | 66749811 | ID=MS.gene068358.t1.exon1;Parent=MS.gene068358.t1 |
chr8.3 | CDS | 66749811 | 66751682 | 66749811 | ID=cds.MS.gene068358.t1;Parent=MS.gene068358.t1 |
Gene Sequence |
Protein sequence |