Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018737.t1 | XP_013449847.1 | 98 | 503 | 10 | 0 | 1 | 503 | 1 | 503 | 1.10E-280 | 975.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018737.t1 | A0A3Q7H216 | 52.2 | 504 | 201 | 9 | 4 | 499 | 3 | 474 | 1.1e-127 | 458.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018737.t1 | A0A072UDK3 | 98.0 | 503 | 10 | 0 | 1 | 503 | 1 | 503 | 7.7e-281 | 975.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene018737.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene85967 | MS.gene018737 | PPI |
MS.gene068358 | MS.gene018737 | PPI |
MS.gene050661 | MS.gene018737 | PPI |
MS.gene59522 | MS.gene018737 | PPI |
MS.gene024426 | MS.gene018737 | PPI |
MS.gene025894 | MS.gene018737 | PPI |
MS.gene22710 | MS.gene018737 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018737.t1 | MTR_7g096350 | 98.012 | 503 | 10 | 0 | 1 | 503 | 1 | 503 | 0.0 | 1028 |
MS.gene018737.t1 | MTR_7g117670 | 36.174 | 575 | 272 | 20 | 5 | 502 | 6 | 562 | 4.40e-86 | 276 |
MS.gene018737.t1 | MTR_8g027495 | 52.841 | 176 | 60 | 3 | 345 | 502 | 448 | 618 | 6.06e-47 | 172 |
MS.gene018737.t1 | MTR_8g027495 | 34.818 | 247 | 138 | 9 | 1 | 231 | 7 | 246 | 1.36e-31 | 129 |
MS.gene018737.t1 | MTR_8g024790 | 28.512 | 484 | 241 | 15 | 43 | 481 | 19 | 442 | 7.40e-43 | 158 |
MS.gene018737.t1 | MTR_5g030430 | 42.584 | 209 | 81 | 3 | 328 | 501 | 466 | 670 | 1.31e-39 | 152 |
MS.gene018737.t1 | MTR_5g030430 | 25.967 | 181 | 126 | 4 | 49 | 223 | 44 | 222 | 3.10e-11 | 66.2 |
MS.gene018737.t1 | MTR_8g024770 | 27.716 | 451 | 215 | 10 | 63 | 469 | 38 | 421 | 6.87e-38 | 144 |
MS.gene018737.t1 | MTR_8g067280 | 43.575 | 179 | 66 | 3 | 337 | 480 | 444 | 622 | 4.55e-37 | 145 |
MS.gene018737.t1 | MTR_8g067280 | 28.804 | 184 | 123 | 6 | 49 | 226 | 53 | 234 | 1.32e-12 | 70.5 |
MS.gene018737.t1 | MTR_4g092700 | 56.250 | 64 | 28 | 0 | 353 | 416 | 156 | 219 | 1.22e-16 | 81.6 |
MS.gene018737.t1 | MTR_5g014600 | 46.591 | 88 | 42 | 2 | 333 | 416 | 123 | 209 | 4.01e-16 | 80.1 |
MS.gene018737.t1 | MTR_1g072320 | 42.857 | 98 | 51 | 2 | 326 | 419 | 438 | 534 | 2.71e-14 | 75.9 |
MS.gene018737.t1 | MTR_1g112680 | 43.182 | 88 | 49 | 1 | 324 | 410 | 285 | 372 | 4.35e-14 | 75.1 |
MS.gene018737.t1 | MTR_4g097940 | 46.341 | 82 | 38 | 2 | 336 | 417 | 140 | 215 | 5.52e-14 | 73.6 |
MS.gene018737.t1 | MTR_4g067010 | 31.765 | 170 | 77 | 4 | 245 | 408 | 64 | 200 | 7.89e-14 | 73.2 |
MS.gene018737.t1 | MTR_2g038040 | 42.308 | 104 | 46 | 4 | 356 | 445 | 53 | 156 | 1.85e-13 | 70.5 |
MS.gene018737.t1 | MTR_4g097950 | 53.704 | 54 | 25 | 0 | 355 | 408 | 70 | 123 | 2.66e-13 | 70.1 |
MS.gene018737.t1 | MTR_2g010450 | 52.632 | 57 | 27 | 0 | 355 | 411 | 177 | 233 | 3.85e-13 | 71.2 |
MS.gene018737.t1 | MTR_5g030420 | 27.957 | 186 | 116 | 6 | 49 | 223 | 27 | 205 | 6.55e-13 | 68.9 |
MS.gene018737.t1 | MTR_5g030420 | 27.957 | 186 | 116 | 6 | 49 | 223 | 27 | 205 | 9.29e-13 | 68.9 |
MS.gene018737.t1 | MTR_4g066380 | 37.113 | 97 | 51 | 1 | 312 | 408 | 120 | 206 | 1.07e-12 | 69.7 |
MS.gene018737.t1 | MTR_4g097920 | 38.462 | 104 | 56 | 3 | 341 | 441 | 123 | 221 | 1.78e-12 | 68.6 |
MS.gene018737.t1 | MTR_4g097920 | 38.462 | 104 | 56 | 3 | 341 | 441 | 138 | 236 | 1.83e-12 | 68.9 |
MS.gene018737.t1 | MTR_3g498695 | 53.448 | 58 | 27 | 0 | 353 | 410 | 296 | 353 | 3.18e-12 | 68.9 |
MS.gene018737.t1 | MTR_3g498695 | 53.448 | 58 | 27 | 0 | 353 | 410 | 296 | 353 | 3.19e-12 | 68.9 |
MS.gene018737.t1 | MTR_8g064700 | 22.129 | 357 | 177 | 12 | 188 | 496 | 111 | 414 | 3.34e-12 | 68.6 |
MS.gene018737.t1 | MTR_5g014640 | 32.231 | 121 | 57 | 2 | 342 | 441 | 145 | 261 | 3.56e-12 | 67.8 |
MS.gene018737.t1 | MTR_0246s0020 | 45.588 | 68 | 31 | 1 | 341 | 408 | 190 | 251 | 4.36e-12 | 68.2 |
MS.gene018737.t1 | MTR_0250s0040 | 40.625 | 96 | 51 | 3 | 313 | 408 | 52 | 141 | 4.50e-12 | 67.0 |
MS.gene018737.t1 | MTR_0246s0020 | 45.588 | 68 | 31 | 1 | 341 | 408 | 190 | 251 | 4.50e-12 | 68.2 |
MS.gene018737.t1 | MTR_5g014520 | 43.836 | 73 | 39 | 1 | 338 | 410 | 142 | 212 | 4.67e-12 | 67.8 |
MS.gene018737.t1 | MTR_7g083900 | 51.724 | 58 | 28 | 0 | 353 | 410 | 284 | 341 | 6.03e-12 | 68.2 |
MS.gene018737.t1 | MTR_7g083900 | 51.724 | 58 | 28 | 0 | 353 | 410 | 284 | 341 | 6.26e-12 | 68.2 |
MS.gene018737.t1 | MTR_8g098275 | 50.820 | 61 | 30 | 0 | 351 | 411 | 240 | 300 | 7.28e-12 | 67.8 |
MS.gene018737.t1 | MTR_8g098275 | 50.820 | 61 | 30 | 0 | 351 | 411 | 304 | 364 | 7.82e-12 | 67.8 |
MS.gene018737.t1 | MTR_2g104550 | 35.652 | 115 | 66 | 4 | 308 | 418 | 90 | 200 | 9.13e-12 | 66.6 |
MS.gene018737.t1 | MTR_8g098275 | 50.820 | 61 | 30 | 0 | 351 | 411 | 397 | 457 | 9.38e-12 | 67.8 |
MS.gene018737.t1 | MTR_4g066460 | 30.488 | 164 | 95 | 3 | 245 | 408 | 64 | 208 | 1.03e-11 | 66.6 |
MS.gene018737.t1 | MTR_6g047550 | 51.852 | 54 | 26 | 0 | 355 | 408 | 173 | 226 | 1.16e-11 | 65.9 |
MS.gene018737.t1 | MTR_0246s0050 | 33.884 | 121 | 67 | 2 | 297 | 408 | 88 | 204 | 2.36e-11 | 65.5 |
MS.gene018737.t1 | MTR_4g098035 | 33.884 | 121 | 67 | 2 | 297 | 408 | 109 | 225 | 2.73e-11 | 65.5 |
MS.gene018737.t1 | MTR_2g104490 | 32.031 | 128 | 82 | 3 | 308 | 433 | 89 | 213 | 2.73e-11 | 65.1 |
MS.gene018737.t1 | MTR_0011s0260 | 51.852 | 54 | 26 | 0 | 355 | 408 | 183 | 236 | 3.29e-11 | 65.1 |
MS.gene018737.t1 | MTR_0011s0210 | 51.852 | 54 | 26 | 0 | 355 | 408 | 183 | 236 | 3.40e-11 | 65.1 |
MS.gene018737.t1 | MTR_2g104490 | 32.031 | 128 | 82 | 3 | 308 | 433 | 89 | 213 | 4.23e-11 | 64.7 |
MS.gene018737.t1 | MTR_5g014560 | 46.429 | 56 | 30 | 0 | 355 | 410 | 131 | 186 | 8.99e-11 | 63.5 |
MS.gene018737.t1 | MTR_4g057270 | 43.939 | 66 | 34 | 1 | 345 | 410 | 142 | 204 | 9.08e-11 | 63.5 |
MS.gene018737.t1 | MTR_2g084280 | 28.000 | 150 | 86 | 4 | 359 | 486 | 137 | 286 | 9.17e-11 | 63.5 |
MS.gene018737.t1 | MTR_3g030700 | 42.857 | 70 | 36 | 1 | 341 | 410 | 186 | 251 | 9.51e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018737.t1 | AT4G16430 | 47.628 | 506 | 219 | 11 | 3 | 502 | 2 | 467 | 1.76e-159 | 461 |
MS.gene018737.t1 | AT2G46510 | 35.000 | 560 | 272 | 14 | 9 | 500 | 9 | 544 | 3.51e-93 | 295 |
MS.gene018737.t1 | AT1G01260 | 52.096 | 167 | 72 | 3 | 338 | 502 | 416 | 576 | 1.13e-47 | 174 |
MS.gene018737.t1 | AT1G01260 | 36.803 | 269 | 137 | 8 | 5 | 245 | 5 | 268 | 3.67e-41 | 156 |
MS.gene018737.t1 | AT1G01260 | 52.096 | 167 | 72 | 3 | 338 | 502 | 416 | 576 | 1.13e-47 | 174 |
MS.gene018737.t1 | AT1G01260 | 36.803 | 269 | 137 | 8 | 5 | 245 | 5 | 268 | 3.67e-41 | 156 |
MS.gene018737.t1 | AT1G01260 | 52.096 | 167 | 72 | 3 | 338 | 502 | 416 | 576 | 1.13e-47 | 174 |
MS.gene018737.t1 | AT1G01260 | 36.803 | 269 | 137 | 8 | 5 | 245 | 5 | 268 | 3.67e-41 | 156 |
MS.gene018737.t1 | AT4G17880 | 27.843 | 510 | 286 | 13 | 49 | 481 | 62 | 566 | 4.72e-45 | 167 |
MS.gene018737.t1 | AT1G32640 | 42.105 | 190 | 81 | 2 | 336 | 500 | 433 | 618 | 1.07e-36 | 144 |
MS.gene018737.t1 | AT5G46760 | 40.816 | 196 | 88 | 1 | 336 | 503 | 396 | 591 | 4.01e-36 | 142 |
MS.gene018737.t1 | AT5G46830 | 28.571 | 483 | 289 | 15 | 41 | 481 | 23 | 491 | 2.23e-35 | 138 |
MS.gene018737.t1 | AT4G00870 | 37.059 | 170 | 73 | 5 | 333 | 468 | 220 | 389 | 1.79e-20 | 94.4 |
MS.gene018737.t1 | AT4G00480 | 24.742 | 388 | 245 | 13 | 50 | 409 | 23 | 391 | 3.53e-20 | 94.0 |
MS.gene018737.t1 | AT4G00480 | 24.742 | 388 | 245 | 13 | 50 | 409 | 23 | 391 | 4.15e-20 | 94.0 |
MS.gene018737.t1 | AT4G00480 | 24.742 | 388 | 245 | 13 | 50 | 409 | 23 | 391 | 4.52e-20 | 94.0 |
MS.gene018737.t1 | AT4G29930 | 27.419 | 186 | 111 | 3 | 327 | 493 | 31 | 211 | 2.26e-15 | 75.9 |
MS.gene018737.t1 | AT2G16910 | 27.881 | 269 | 147 | 9 | 195 | 422 | 121 | 383 | 2.76e-15 | 79.0 |
MS.gene018737.t1 | AT4G29930 | 26.776 | 183 | 113 | 4 | 327 | 493 | 31 | 208 | 5.80e-15 | 74.7 |
MS.gene018737.t1 | AT5G57150 | 46.512 | 86 | 33 | 1 | 325 | 410 | 37 | 109 | 7.66e-15 | 74.3 |
MS.gene018737.t1 | AT5G57150 | 46.512 | 86 | 33 | 1 | 325 | 410 | 38 | 110 | 8.78e-15 | 73.9 |
MS.gene018737.t1 | AT5G57150 | 46.512 | 86 | 33 | 1 | 325 | 410 | 38 | 110 | 9.66e-15 | 73.9 |
MS.gene018737.t1 | AT5G57150 | 46.512 | 86 | 33 | 1 | 325 | 410 | 37 | 109 | 1.43e-14 | 73.9 |
MS.gene018737.t1 | AT5G57150 | 46.512 | 86 | 33 | 1 | 325 | 410 | 38 | 110 | 1.76e-14 | 73.9 |
MS.gene018737.t1 | AT4G37850 | 49.333 | 75 | 38 | 0 | 337 | 411 | 134 | 208 | 2.63e-14 | 74.3 |
MS.gene018737.t1 | AT4G37850 | 49.333 | 75 | 38 | 0 | 337 | 411 | 134 | 208 | 2.63e-14 | 74.3 |
MS.gene018737.t1 | AT1G63650 | 47.761 | 67 | 35 | 0 | 351 | 417 | 401 | 467 | 5.98e-14 | 74.7 |
MS.gene018737.t1 | AT1G63650 | 26.961 | 204 | 126 | 4 | 42 | 229 | 9 | 205 | 2.66e-13 | 72.8 |
MS.gene018737.t1 | AT1G63650 | 47.761 | 67 | 35 | 0 | 351 | 417 | 401 | 467 | 5.98e-14 | 74.7 |
MS.gene018737.t1 | AT1G63650 | 26.961 | 204 | 126 | 4 | 42 | 229 | 9 | 205 | 2.66e-13 | 72.8 |
MS.gene018737.t1 | AT1G63650 | 47.761 | 67 | 35 | 0 | 351 | 417 | 401 | 467 | 5.98e-14 | 74.7 |
MS.gene018737.t1 | AT1G63650 | 26.961 | 204 | 126 | 4 | 42 | 229 | 9 | 205 | 2.66e-13 | 72.8 |
MS.gene018737.t1 | AT5G41315 | 25.446 | 224 | 125 | 6 | 42 | 238 | 15 | 223 | 1.10e-13 | 73.9 |
MS.gene018737.t1 | AT5G41315 | 39.130 | 69 | 42 | 0 | 349 | 417 | 440 | 508 | 1.58e-11 | 67.4 |
MS.gene018737.t1 | AT5G41315 | 25.446 | 224 | 125 | 6 | 42 | 238 | 18 | 226 | 1.13e-13 | 73.9 |
MS.gene018737.t1 | AT5G41315 | 39.130 | 69 | 42 | 0 | 349 | 417 | 443 | 511 | 1.54e-11 | 67.4 |
MS.gene018737.t1 | AT5G41315 | 25.446 | 224 | 125 | 6 | 42 | 238 | 10 | 218 | 1.17e-13 | 73.9 |
MS.gene018737.t1 | AT5G41315 | 39.130 | 69 | 42 | 0 | 349 | 417 | 435 | 503 | 1.57e-11 | 67.4 |
MS.gene018737.t1 | AT4G09820 | 27.108 | 166 | 106 | 2 | 335 | 496 | 354 | 508 | 1.91e-13 | 73.2 |
MS.gene018737.t1 | AT4G29930 | 38.835 | 103 | 56 | 2 | 327 | 427 | 31 | 128 | 2.01e-13 | 70.9 |
MS.gene018737.t1 | AT4G29930 | 38.835 | 103 | 56 | 2 | 327 | 427 | 31 | 128 | 2.01e-13 | 70.9 |
MS.gene018737.t1 | AT4G29930 | 38.835 | 103 | 56 | 2 | 327 | 427 | 31 | 128 | 2.40e-13 | 70.5 |
MS.gene018737.t1 | AT4G29930 | 26.901 | 171 | 104 | 4 | 327 | 481 | 31 | 196 | 2.43e-13 | 70.1 |
MS.gene018737.t1 | AT4G29930 | 38.835 | 103 | 56 | 2 | 327 | 427 | 31 | 128 | 2.43e-13 | 68.9 |
MS.gene018737.t1 | AT2G22750 | 51.562 | 64 | 31 | 0 | 341 | 404 | 112 | 175 | 4.05e-13 | 70.5 |
MS.gene018737.t1 | AT2G22750 | 51.562 | 64 | 31 | 0 | 341 | 404 | 140 | 203 | 4.08e-13 | 70.9 |
MS.gene018737.t1 | AT2G22750 | 51.562 | 64 | 31 | 0 | 341 | 404 | 140 | 203 | 4.12e-13 | 70.9 |
MS.gene018737.t1 | AT2G22750 | 51.562 | 64 | 31 | 0 | 341 | 404 | 112 | 175 | 4.21e-13 | 70.5 |
MS.gene018737.t1 | AT2G22750 | 51.562 | 64 | 31 | 0 | 341 | 404 | 136 | 199 | 4.36e-13 | 70.9 |
MS.gene018737.t1 | AT1G12860 | 55.172 | 58 | 26 | 0 | 353 | 410 | 265 | 322 | 5.62e-13 | 71.2 |
MS.gene018737.t1 | AT1G12860 | 55.172 | 58 | 26 | 0 | 353 | 410 | 265 | 322 | 6.61e-13 | 71.2 |
MS.gene018737.t1 | AT2G22770 | 44.872 | 78 | 40 | 1 | 349 | 423 | 123 | 200 | 1.28e-12 | 69.3 |
MS.gene018737.t1 | AT3G26744 | 53.448 | 58 | 27 | 0 | 353 | 410 | 305 | 362 | 2.36e-12 | 69.7 |
MS.gene018737.t1 | AT3G26744 | 53.448 | 58 | 27 | 0 | 353 | 410 | 305 | 362 | 2.36e-12 | 69.7 |
MS.gene018737.t1 | AT3G26744 | 53.448 | 58 | 27 | 0 | 353 | 410 | 305 | 362 | 2.36e-12 | 69.7 |
MS.gene018737.t1 | AT3G26744 | 53.448 | 58 | 27 | 0 | 353 | 410 | 305 | 362 | 2.38e-12 | 69.3 |
MS.gene018737.t1 | AT5G10570 | 36.220 | 127 | 70 | 3 | 299 | 416 | 89 | 213 | 7.09e-11 | 63.9 |
Find 124 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGGATATCCACCCGGTTTC+TGG | 0.132043 | 7.1:-11270749 | MS.gene018737:CDS |
ATGGACAAGGCTTCTCTTCT+TGG | 0.203486 | 7.1:-11270926 | MS.gene018737:CDS |
CCAGAATCATCTTCCACTTT+TGG | 0.206725 | 7.1:+11271295 | None:intergenic |
TGAGAATATTTATAAGAAAT+TGG | 0.206945 | 7.1:-11271704 | MS.gene018737:CDS |
TGTTCCTAACATTTCTAAAA+TGG | 0.208602 | 7.1:-11270945 | MS.gene018737:CDS |
GTATGAATCGAGGTCGTTTC+TGG | 0.219744 | 7.1:-11271542 | MS.gene018737:CDS |
TGATGTTAGGAGGAAGGTTT+TGG | 0.250788 | 7.1:-11271764 | MS.gene018737:CDS |
CCATAAGCTTGATCTTCTTC+TGG | 0.258919 | 7.1:+11270876 | None:intergenic |
AGAGTTTCTTCTATTGATTT+AGG | 0.261536 | 7.1:-11271124 | MS.gene018737:CDS |
TGGGGAAGATTCATGGTTGC+TGG | 0.279240 | 7.1:-11271744 | MS.gene018737:CDS |
TCCCTTTCCTGCTCATTCCT+TGG | 0.291476 | 7.1:+11271793 | None:intergenic |
ACCTCTGTCTATTATGTGTT+TGG | 0.301401 | 7.1:-11271649 | MS.gene018737:CDS |
CCAAAAGTGGAAGATGATTC+TGG | 0.302301 | 7.1:-11271295 | MS.gene018737:CDS |
TCTTCTGGAGATCAGTGATA+TGG | 0.305181 | 7.1:+11270891 | None:intergenic |
CCAGAAGAAGATCAAGCTTA+TGG | 0.312383 | 7.1:-11270876 | MS.gene018737:CDS |
GATATGGTCAGGGCAACTTT+TGG | 0.330665 | 7.1:-11271418 | MS.gene018737:CDS |
GGGGAAGATTCATGGTTGCT+GGG | 0.377703 | 7.1:-11271743 | MS.gene018737:CDS |
TAAGAAATTGGACAGTGTTT+CGG | 0.382697 | 7.1:-11271692 | MS.gene018737:CDS |
CAGTTGGGTCAAATGATTCC+TGG | 0.383826 | 7.1:-11271166 | MS.gene018737:CDS |
CAGGTTGCCGGTTTGAAATC+CGG | 0.384873 | 7.1:-11271868 | MS.gene018737:CDS |
AAAGGGAGAAAGATGATGTT+AGG | 0.390427 | 7.1:-11271777 | MS.gene018737:CDS |
ATGTATGAATTACTTTATCC+TGG | 0.397717 | 7.1:+11270666 | None:intergenic |
GTTAGGAACAACAGCTCTTA+AGG | 0.401789 | 7.1:+11270958 | None:intergenic |
GTGGATAGTCAAGTCAAGAT+TGG | 0.406376 | 7.1:+11271945 | None:intergenic |
GAGGTCGTTTCTGGCTAAAT+CGG | 0.407099 | 7.1:-11271533 | MS.gene018737:CDS |
GCACACTTAAAAGAATTTCC+AGG | 0.410186 | 7.1:+11271607 | None:intergenic |
ACTTTAACAATTCCAGAAAC+CGG | 0.412032 | 7.1:+11270737 | None:intergenic |
CTTGGCGCAAACCATGCTTA+TGG | 0.414623 | 7.1:-11271241 | MS.gene018737:CDS |
AAGATTCATGGTTGCTGGGG+TGG | 0.418070 | 7.1:-11271739 | MS.gene018737:CDS |
TTTGGGCACGAGTTAAGCTT+GGG | 0.421749 | 7.1:-11271355 | MS.gene018737:CDS |
CTCTTAAGGCGTAAAATCTC+TGG | 0.435497 | 7.1:+11270972 | None:intergenic |
GGTTCCTCTCGTCCATTGGC+AGG | 0.435606 | 7.1:+11271040 | None:intergenic |
CTTATGGTAATTCTTCCAAC+GGG | 0.438633 | 7.1:-11271225 | MS.gene018737:CDS |
CAGTGGTTCCTCTCGTCCAT+TGG | 0.439512 | 7.1:+11271036 | None:intergenic |
AGGTTGTGTCACATTGTTAA+CGG | 0.439902 | 7.1:-11271919 | MS.gene018737:CDS |
GAAAGATGATGTTAGGAGGA+AGG | 0.440512 | 7.1:-11271770 | MS.gene018737:CDS |
TATCTTGCAATGGCAATTGC+TGG | 0.440816 | 7.1:+11270822 | None:intergenic |
TTTAATTCTCAGTATGGTCC+TGG | 0.444163 | 7.1:-11271625 | MS.gene018737:CDS |
TGGATAGTCAAGTCAAGATT+GGG | 0.462920 | 7.1:+11271946 | None:intergenic |
GAAGACTCCTCCTCACCTCT+TGG | 0.464557 | 7.1:-11271097 | MS.gene018737:CDS |
TGAAGAAGACAAGGCTATGT+TGG | 0.466385 | 7.1:-11272049 | MS.gene018737:CDS |
TATTAGTTTCTCCCCAAAAG+TGG | 0.469095 | 7.1:-11271308 | MS.gene018737:CDS |
TTCCCCTCCTTGAGTTCTGA+TGG | 0.471316 | 7.1:+11270640 | None:intergenic |
TCTATAACCCCGGCTTTAAG+AGG | 0.476638 | 7.1:+11271484 | None:intergenic |
TTGACTTGACTATCCACAAA+AGG | 0.478393 | 7.1:-11271939 | MS.gene018737:CDS |
ATCTACCTCTGGACAGGCTA+AGG | 0.484847 | 7.1:-11271392 | MS.gene018737:CDS |
ATACGGTGAGGGACACTGTC+AGG | 0.487755 | 7.1:-11271830 | MS.gene018737:CDS |
TCGTTTCTGGCTAAATCGGC+TGG | 0.495546 | 7.1:-11271529 | MS.gene018737:CDS |
GGCCAATGTTTCAACTTCCC+AGG | 0.496533 | 7.1:-11270684 | MS.gene018737:CDS |
CCAAGTTGGTCTTCTGATGC+TGG | 0.500304 | 7.1:-11271580 | MS.gene018737:CDS |
CTTCTGGAGATCAGTGATAT+GGG | 0.500322 | 7.1:+11270892 | None:intergenic |
GTCCAAGGAATGAGCAGGAA+AGG | 0.501601 | 7.1:-11271795 | MS.gene018737:CDS |
GGCTATGTTGGAATCTGTGT+TGG | 0.505854 | 7.1:-11272037 | MS.gene018737:CDS |
AAAGCCGGGGTTATAGAGCT+TGG | 0.507196 | 7.1:-11271478 | MS.gene018737:CDS |
TGGAGAATCTACCTCTGGAC+AGG | 0.507498 | 7.1:-11271398 | MS.gene018737:CDS |
TGTTAGAGTTAGCTGCCCCT+TGG | 0.517530 | 7.1:-11270768 | MS.gene018737:CDS |
TCCAAGGAATGAGCAGGAAA+GGG | 0.524680 | 7.1:-11271794 | MS.gene018737:CDS |
GACACTGTCAGGATCCCAAA+GGG | 0.526579 | 7.1:-11271819 | MS.gene018737:CDS |
ATCCTGGGAAGTTGAAACAT+TGG | 0.527219 | 7.1:+11270682 | None:intergenic |
CTGCCCCTTGGATATCCACC+CGG | 0.528394 | 7.1:-11270756 | MS.gene018737:CDS |
GGTTATAGAGCTTGGTTCGA+CGG | 0.532928 | 7.1:-11271470 | MS.gene018737:CDS |
AGAGCTTGGTTCGACGGAGA+TGG | 0.536663 | 7.1:-11271464 | MS.gene018737:CDS |
CAAAATCGCGTAGTTCCACT+TGG | 0.541178 | 7.1:+11271894 | None:intergenic |
AGAGAAAGATGGCTGGTGAG+AGG | 0.545343 | 7.1:-11272083 | None:intergenic |
TTAAGTGTGCTAAACCAAGT+TGG | 0.545549 | 7.1:-11271594 | MS.gene018737:CDS |
GGGAAGATTCATGGTTGCTG+GGG | 0.546890 | 7.1:-11271742 | MS.gene018737:CDS |
TGTATGAATTACTTTATCCT+GGG | 0.549481 | 7.1:+11270667 | None:intergenic |
ATAGCCACCGGATTTCAAAC+CGG | 0.550635 | 7.1:+11271861 | None:intergenic |
GCCTGAGAAGTAAAATTCCC+AGG | 0.550809 | 7.1:+11271148 | None:intergenic |
GCATCAAATTGTAGCTCAAG+AGG | 0.553064 | 7.1:-11270705 | MS.gene018737:CDS |
TTGAAGCGGAGAGGCAAAGA+CGG | 0.553502 | 7.1:-11271006 | MS.gene018737:CDS |
GCTTATGGTAATTCTTCCAA+CGG | 0.554315 | 7.1:-11271226 | MS.gene018737:CDS |
CCAGCATCAGAAGACCAACT+TGG | 0.555302 | 7.1:+11271580 | None:intergenic |
AGTTGGGTCAAATGATTCCT+GGG | 0.557673 | 7.1:-11271165 | MS.gene018737:CDS |
TGGAAGAATTACCATAAGCA+TGG | 0.563019 | 7.1:+11271230 | None:intergenic |
ACATTCTCCATCAGAACTCA+AGG | 0.569500 | 7.1:-11270647 | MS.gene018737:CDS |
CTTTAACAATTCCAGAAACC+GGG | 0.569555 | 7.1:+11270738 | None:intergenic |
GGGAGAAAGATGATGTTAGG+AGG | 0.569685 | 7.1:-11271774 | MS.gene018737:CDS |
TCCGCTTCAACATGATTCAG+TGG | 0.571772 | 7.1:+11271019 | None:intergenic |
TGAAGCGGAGAGGCAAAGAC+GGG | 0.572704 | 7.1:-11271005 | MS.gene018737:CDS |
GGTGGCTATGTGTTGAAATA+CGG | 0.578846 | 7.1:-11271847 | MS.gene018737:CDS |
AGAAACCGGGTGGATATCCA+AGG | 0.585451 | 7.1:+11270751 | None:intergenic |
TCTTACGAAGTACAAGCGCT+TGG | 0.588221 | 7.1:-11271259 | MS.gene018737:CDS |
TGGGCACGAGTTAAGCTTGG+GGG | 0.592030 | 7.1:-11271353 | MS.gene018737:CDS |
TGAAAATCAATATCTTGCAA+TGG | 0.592942 | 7.1:+11270812 | None:intergenic |
CTCCATCAGAACTCAAGGAG+GGG | 0.593410 | 7.1:-11270642 | MS.gene018737:CDS |
GTATAGTAGAGAAAGATGGC+TGG | 0.593720 | 7.1:-11272090 | None:intergenic |
TAACATTTCTAAAATGGACA+AGG | 0.599447 | 7.1:-11270939 | MS.gene018737:CDS |
CTCGTCTCCAAGAGGTGAGG+AGG | 0.602197 | 7.1:+11271090 | None:intergenic |
AGAGGGAGAAAACCTGCCAA+TGG | 0.605353 | 7.1:-11271052 | MS.gene018737:CDS |
ACCACTGAATCATGTTGAAG+CGG | 0.606334 | 7.1:-11271020 | MS.gene018737:CDS |
GTATTTCAACACATAGCCAC+CGG | 0.614051 | 7.1:+11271849 | None:intergenic |
GCTATGTTGGAATCTGTGTT+GGG | 0.620643 | 7.1:-11272036 | MS.gene018737:CDS |
GGACACTGTCAGGATCCCAA+AGG | 0.622420 | 7.1:-11271820 | MS.gene018737:CDS |
TCTCCATCAGAACTCAAGGA+GGG | 0.623115 | 7.1:-11270643 | MS.gene018737:CDS |
CACTGTCAGGATCCCAAAGG+GGG | 0.625514 | 7.1:-11271817 | MS.gene018737:CDS |
TTGTAAGAATGAAGAAGACA+AGG | 0.629373 | 7.1:-11272058 | MS.gene018737:CDS |
GAATCATTTGACCCAACTGA+GGG | 0.642194 | 7.1:+11271170 | None:intergenic |
CCGCTCGTCTCCAAGAGGTG+AGG | 0.645733 | 7.1:+11271087 | None:intergenic |
CCTCACCTCTTGGAGACGAG+CGG | 0.646158 | 7.1:-11271087 | MS.gene018737:CDS |
TATGGTAATTCTTCCAACGG+GGG | 0.650209 | 7.1:-11271223 | MS.gene018737:CDS |
TGCTACCTTAGCCTGTCCAG+AGG | 0.651503 | 7.1:+11271387 | None:intergenic |
TTCTCCATCAGAACTCAAGG+AGG | 0.654759 | 7.1:-11270644 | MS.gene018737:CDS |
AAAACCTGCCAATGGACGAG+AGG | 0.654921 | 7.1:-11271044 | MS.gene018737:CDS |
GAAACCGGGTGGATATCCAA+GGG | 0.657964 | 7.1:+11270752 | None:intergenic |
TGAATCATGTTGAAGCGGAG+AGG | 0.659736 | 7.1:-11271015 | MS.gene018737:CDS |
GGAATCATTTGACCCAACTG+AGG | 0.660288 | 7.1:+11271169 | None:intergenic |
GGCTTCCGCTCGTCTCCAAG+AGG | 0.660984 | 7.1:+11271082 | None:intergenic |
GTTGCCGGTTTGAAATCCGG+TGG | 0.661652 | 7.1:-11271865 | MS.gene018737:CDS |
ACATTGTTAACGGTTCCAAG+TGG | 0.664341 | 7.1:-11271909 | MS.gene018737:CDS |
TTGGGCACGAGTTAAGCTTG+GGG | 0.666411 | 7.1:-11271354 | MS.gene018737:CDS |
CGAACCAAGCTCTATAACCC+CGG | 0.673641 | 7.1:+11271474 | None:intergenic |
GTTTAAATCAGTATGAATCG+AGG | 0.676935 | 7.1:-11271552 | MS.gene018737:CDS |
ATTGGGCGGAACAATAACAT+CGG | 0.685885 | 7.1:+11271963 | None:intergenic |
GAGATGGTGCCTGAAGAGCA+AGG | 0.686748 | 7.1:-11271448 | MS.gene018737:CDS |
ACACTGTCAGGATCCCAAAG+GGG | 0.690461 | 7.1:-11271818 | MS.gene018737:CDS |
TAACAATTCCAGAAACCGGG+TGG | 0.692180 | 7.1:+11270741 | None:intergenic |
ATAGTCAAGTCAAGATTGGG+CGG | 0.692278 | 7.1:+11271949 | None:intergenic |
ACCAAACACATAATAGACAG+AGG | 0.698940 | 7.1:+11271648 | None:intergenic |
TATGTGTTGAAATACGGTGA+GGG | 0.713229 | 7.1:-11271841 | MS.gene018737:CDS |
TTATGGTAATTCTTCCAACG+GGG | 0.725236 | 7.1:-11271224 | MS.gene018737:CDS |
AAACCGGGTGGATATCCAAG+GGG | 0.728834 | 7.1:+11270753 | None:intergenic |
CTATGTGTTGAAATACGGTG+AGG | 0.742411 | 7.1:-11271842 | MS.gene018737:CDS |
GGGTGTAGGAGACAGCAACG+AGG | 0.803375 | 7.1:-11271203 | MS.gene018737:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAGAATATTTATAAGAAAT+TGG | - | chr7.1:11270957-11270976 | MS.gene018737:CDS | 15.0% |
! | ATGTATGAATTACTTTATCC+TGG | + | chr7.1:11271998-11272017 | None:intergenic | 25.0% |
! | TATGGAAACTGAAAAAAACA+TGG | - | chr7.1:11271803-11271822 | MS.gene018737:CDS | 25.0% |
! | TGAAAATCAATATCTTGCAA+TGG | + | chr7.1:11271852-11271871 | None:intergenic | 25.0% |
! | TGTATGAATTACTTTATCCT+GGG | + | chr7.1:11271997-11272016 | None:intergenic | 25.0% |
!! | TGTTCCTAACATTTCTAAAA+TGG | - | chr7.1:11271716-11271735 | MS.gene018737:CDS | 25.0% |
!!! | AGAGTTTCTTCTATTGATTT+AGG | - | chr7.1:11271537-11271556 | MS.gene018737:CDS | 25.0% |
!!! | ATTGCAAGATATTGATTTTC+AGG | - | chr7.1:11271851-11271870 | MS.gene018737:CDS | 25.0% |
!!! | TAACATTTCTAAAATGGACA+AGG | - | chr7.1:11271722-11271741 | MS.gene018737:CDS | 25.0% |
!!! | TTGTCCATTTTAGAAATGTT+AGG | + | chr7.1:11271723-11271742 | None:intergenic | 25.0% |
!!! | TTTGGTTTTAATTCTCAGTA+TGG | - | chr7.1:11271030-11271049 | MS.gene018737:CDS | 25.0% |
AAAAAACATGGCTGACAATA+AGG | - | chr7.1:11271815-11271834 | MS.gene018737:CDS | 30.0% | |
AAAAACATGGCTGACAATAA+GGG | - | chr7.1:11271816-11271835 | MS.gene018737:CDS | 30.0% | |
ACTTTAACAATTCCAGAAAC+CGG | + | chr7.1:11271927-11271946 | None:intergenic | 30.0% | |
GTTTAAATCAGTATGAATCG+AGG | - | chr7.1:11271109-11271128 | MS.gene018737:CDS | 30.0% | |
TAAGAAATTGGACAGTGTTT+CGG | - | chr7.1:11270969-11270988 | MS.gene018737:CDS | 30.0% | |
TTGTAAGAATGAAGAAGACA+AGG | - | chr7.1:11270603-11270622 | MS.gene018737:CDS | 30.0% | |
AAAGGGAGAAAGATGATGTT+AGG | - | chr7.1:11270884-11270903 | MS.gene018737:CDS | 35.0% | |
ACCAAACACATAATAGACAG+AGG | + | chr7.1:11271016-11271035 | None:intergenic | 35.0% | |
ACCTCTGTCTATTATGTGTT+TGG | - | chr7.1:11271012-11271031 | MS.gene018737:CDS | 35.0% | |
AGGTTGTGTCACATTGTTAA+CGG | - | chr7.1:11270742-11270761 | MS.gene018737:CDS | 35.0% | |
CTTATGGTAATTCTTCCAAC+GGG | - | chr7.1:11271436-11271455 | MS.gene018737:CDS | 35.0% | |
CTTTAACAATTCCAGAAACC+GGG | + | chr7.1:11271926-11271945 | None:intergenic | 35.0% | |
GCACACTTAAAAGAATTTCC+AGG | + | chr7.1:11271057-11271076 | None:intergenic | 35.0% | |
GCTTATGGTAATTCTTCCAA+CGG | - | chr7.1:11271435-11271454 | MS.gene018737:CDS | 35.0% | |
TATGTGTTGAAATACGGTGA+GGG | - | chr7.1:11270820-11270839 | MS.gene018737:CDS | 35.0% | |
TGGAAGAATTACCATAAGCA+TGG | + | chr7.1:11271434-11271453 | None:intergenic | 35.0% | |
TGGATAGTCAAGTCAAGATT+GGG | + | chr7.1:11270718-11270737 | None:intergenic | 35.0% | |
TTAAGTGTGCTAAACCAAGT+TGG | - | chr7.1:11271067-11271086 | MS.gene018737:CDS | 35.0% | |
TTATGGTAATTCTTCCAACG+GGG | - | chr7.1:11271437-11271456 | MS.gene018737:CDS | 35.0% | |
TTTAATTCTCAGTATGGTCC+TGG | - | chr7.1:11271036-11271055 | MS.gene018737:CDS | 35.0% | |
! | AAGGTAGCACCAAAGATTTT+TGG | - | chr7.1:11271288-11271307 | MS.gene018737:CDS | 35.0% |
! | AGGTAGCACCAAAGATTTTT+GGG | - | chr7.1:11271289-11271308 | MS.gene018737:CDS | 35.0% |
! | TATTAGTTTCTCCCCAAAAG+TGG | - | chr7.1:11271353-11271372 | MS.gene018737:CDS | 35.0% |
! | TTGACTTGACTATCCACAAA+AGG | - | chr7.1:11270722-11270741 | MS.gene018737:CDS | 35.0% |
!! | AGAATCATCTTCCACTTTTG+GGG | + | chr7.1:11271367-11271386 | None:intergenic | 35.0% |
!! | CAGAATCATCTTCCACTTTT+GGG | + | chr7.1:11271368-11271387 | None:intergenic | 35.0% |
!!! | AAGGTTTTTTGGATATGGTC+AGG | - | chr7.1:11271232-11271251 | MS.gene018737:CDS | 35.0% |
!!! | AGAGCAAGGTTTTTTGGATA+TGG | - | chr7.1:11271227-11271246 | MS.gene018737:CDS | 35.0% |
!!! | AGGTTTTTTGGATATGGTCA+GGG | - | chr7.1:11271233-11271252 | MS.gene018737:CDS | 35.0% |
AACTCGTGCCCAAAAATCTT+TGG | + | chr7.1:11271300-11271319 | None:intergenic | 40.0% | |
ACATTCTCCATCAGAACTCA+AGG | - | chr7.1:11272014-11272033 | MS.gene018737:CDS | 40.0% | |
ACATTGTTAACGGTTCCAAG+TGG | - | chr7.1:11270752-11270771 | MS.gene018737:CDS | 40.0% | |
ACCACTGAATCATGTTGAAG+CGG | - | chr7.1:11271641-11271660 | MS.gene018737:CDS | 40.0% | |
AGTTGGGTCAAATGATTCCT+GGG | - | chr7.1:11271496-11271515 | MS.gene018737:CDS | 40.0% | |
ATAGTCAAGTCAAGATTGGG+CGG | + | chr7.1:11270715-11270734 | None:intergenic | 40.0% | |
ATCCTGGGAAGTTGAAACAT+TGG | + | chr7.1:11271982-11272001 | None:intergenic | 40.0% | |
ATTGGGCGGAACAATAACAT+CGG | + | chr7.1:11270701-11270720 | None:intergenic | 40.0% | |
CCAAAAGTGGAAGATGATTC+TGG | - | chr7.1:11271366-11271385 | MS.gene018737:CDS | 40.0% | |
CCAGAAGAAGATCAAGCTTA+TGG | - | chr7.1:11271785-11271804 | MS.gene018737:CDS | 40.0% | |
CCATAAGCTTGATCTTCTTC+TGG | + | chr7.1:11271788-11271807 | None:intergenic | 40.0% | |
CTATGTGTTGAAATACGGTG+AGG | - | chr7.1:11270819-11270838 | MS.gene018737:CDS | 40.0% | |
CTCTTAAGGCGTAAAATCTC+TGG | + | chr7.1:11271692-11271711 | None:intergenic | 40.0% | |
GAAAGATGATGTTAGGAGGA+AGG | - | chr7.1:11270891-11270910 | MS.gene018737:CDS | 40.0% | |
GAATCATTTGACCCAACTGA+GGG | + | chr7.1:11271494-11271513 | None:intergenic | 40.0% | |
GCATCAAATTGTAGCTCAAG+AGG | - | chr7.1:11271956-11271975 | MS.gene018737:CDS | 40.0% | |
GCTATGTTGGAATCTGTGTT+GGG | - | chr7.1:11270625-11270644 | MS.gene018737:CDS | 40.0% | |
GGTGGCTATGTGTTGAAATA+CGG | - | chr7.1:11270814-11270833 | MS.gene018737:CDS | 40.0% | |
GTATTTCAACACATAGCCAC+CGG | + | chr7.1:11270815-11270834 | None:intergenic | 40.0% | |
GTGGATAGTCAAGTCAAGAT+TGG | + | chr7.1:11270719-11270738 | None:intergenic | 40.0% | |
GTTAGGAACAACAGCTCTTA+AGG | + | chr7.1:11271706-11271725 | None:intergenic | 40.0% | |
TATCTTGCAATGGCAATTGC+TGG | + | chr7.1:11271842-11271861 | None:intergenic | 40.0% | |
TATGGTAATTCTTCCAACGG+GGG | - | chr7.1:11271438-11271457 | MS.gene018737:CDS | 40.0% | |
TCCAAAAAACCTTGCTCTTC+AGG | + | chr7.1:11271225-11271244 | None:intergenic | 40.0% | |
TGAAGAAGACAAGGCTATGT+TGG | - | chr7.1:11270612-11270631 | MS.gene018737:CDS | 40.0% | |
! | ATGTTAGGAGGAAGGTTTTG+GGG | - | chr7.1:11270899-11270918 | MS.gene018737:CDS | 40.0% |
! | CAATGTGACACAACCTTTTG+TGG | + | chr7.1:11270738-11270757 | None:intergenic | 40.0% |
! | CCAGAATCATCTTCCACTTT+TGG | + | chr7.1:11271369-11271388 | None:intergenic | 40.0% |
! | CTTCTGGAGATCAGTGATAT+GGG | + | chr7.1:11271772-11271791 | None:intergenic | 40.0% |
! | CTTTTGTACCTCTTAAAGCC+GGG | - | chr7.1:11271169-11271188 | MS.gene018737:CDS | 40.0% |
! | GATGTTAGGAGGAAGGTTTT+GGG | - | chr7.1:11270898-11270917 | MS.gene018737:CDS | 40.0% |
! | GCTTTTGTACCTCTTAAAGC+CGG | - | chr7.1:11271168-11271187 | MS.gene018737:CDS | 40.0% |
! | GGTTTTCTCCCTCTTTTTCT+AGG | + | chr7.1:11271603-11271622 | None:intergenic | 40.0% |
! | TCCTGGGAATTTTACTTCTC+AGG | - | chr7.1:11271512-11271531 | MS.gene018737:CDS | 40.0% |
! | TCTTCTGGAGATCAGTGATA+TGG | + | chr7.1:11271773-11271792 | None:intergenic | 40.0% |
! | TGATGTTAGGAGGAAGGTTT+TGG | - | chr7.1:11270897-11270916 | MS.gene018737:CDS | 40.0% |
! | TTTTGTACCTCTTAAAGCCG+GGG | - | chr7.1:11271170-11271189 | MS.gene018737:CDS | 40.0% |
!! | ACTTTTGGAGAATCTACCTC+TGG | - | chr7.1:11271258-11271277 | MS.gene018737:CDS | 40.0% |
!! | GCAAAAAAGTACCCTCAGTT+GGG | - | chr7.1:11271480-11271499 | MS.gene018737:CDS | 40.0% |
!!! | AAGGTTTTGGGGAAGATTCA+TGG | - | chr7.1:11270910-11270929 | MS.gene018737:CDS | 40.0% |
!!! | TATTGATTTTCAGGCTCGAC+AGG | - | chr7.1:11271860-11271879 | MS.gene018737:CDS | 40.0% |
AGCGGAAGCCTAGAAAAAGA+GGG | - | chr7.1:11271592-11271611 | MS.gene018737:CDS | 45.0% | |
ATAGCCACCGGATTTCAAAC+CGG | + | chr7.1:11270803-11270822 | None:intergenic | 45.0% | |
ATGGACAAGGCTTCTCTTCT+TGG | - | chr7.1:11271735-11271754 | MS.gene018737:CDS | 45.0% | |
CAAAATCGCGTAGTTCCACT+TGG | + | chr7.1:11270770-11270789 | None:intergenic | 45.0% | |
CAGTTGGGTCAAATGATTCC+TGG | - | chr7.1:11271495-11271514 | MS.gene018737:CDS | 45.0% | |
GCCTGAGAAGTAAAATTCCC+AGG | + | chr7.1:11271516-11271535 | None:intergenic | 45.0% | |
GGAATCATTTGACCCAACTG+AGG | + | chr7.1:11271495-11271514 | None:intergenic | 45.0% | |
GGCTATGTTGGAATCTGTGT+TGG | - | chr7.1:11270624-11270643 | MS.gene018737:CDS | 45.0% | |
GGGAGAAAGATGATGTTAGG+AGG | - | chr7.1:11270887-11270906 | MS.gene018737:CDS | 45.0% | |
GTATGAATCGAGGTCGTTTC+TGG | - | chr7.1:11271119-11271138 | MS.gene018737:CDS | 45.0% | |
TAACAATTCCAGAAACCGGG+TGG | + | chr7.1:11271923-11271942 | None:intergenic | 45.0% | |
TCCAAGGAATGAGCAGGAAA+GGG | - | chr7.1:11270867-11270886 | MS.gene018737:CDS | 45.0% | |
TCCGCTTCAACATGATTCAG+TGG | + | chr7.1:11271645-11271664 | None:intergenic | 45.0% | |
TCTCCATCAGAACTCAAGGA+GGG | - | chr7.1:11272018-11272037 | MS.gene018737:CDS | 45.0% | |
TCTTACGAAGTACAAGCGCT+TGG | - | chr7.1:11271402-11271421 | MS.gene018737:CDS | 45.0% | |
TGAATCATGTTGAAGCGGAG+AGG | - | chr7.1:11271646-11271665 | MS.gene018737:CDS | 45.0% | |
TTCTCCATCAGAACTCAAGG+AGG | - | chr7.1:11272017-11272036 | MS.gene018737:CDS | 45.0% | |
TTTGGGCACGAGTTAAGCTT+GGG | - | chr7.1:11271306-11271325 | MS.gene018737:CDS | 45.0% | |
! | AGTGGAACTACGCGATTTTG+TGG | - | chr7.1:11270770-11270789 | MS.gene018737:CDS | 45.0% |
! | GATATGGTCAGGGCAACTTT+TGG | - | chr7.1:11271243-11271262 | MS.gene018737:CDS | 45.0% |
! | GGTTATAGAGCTTGGTTCGA+CGG | - | chr7.1:11271191-11271210 | MS.gene018737:CDS | 45.0% |
! | TTTTGGGCACGAGTTAAGCT+TGG | - | chr7.1:11271305-11271324 | MS.gene018737:CDS | 45.0% |
!! | GAGGTCGTTTCTGGCTAAAT+CGG | - | chr7.1:11271128-11271147 | MS.gene018737:CDS | 45.0% |
!! | GGCAAAAAAGTACCCTCAGT+TGG | - | chr7.1:11271479-11271498 | MS.gene018737:CDS | 45.0% |
!! | TCTATAACCCCGGCTTTAAG+AGG | + | chr7.1:11271180-11271199 | None:intergenic | 45.0% |
!!! | GCCTGAAGAGCAAGGTTTTT+TGG | - | chr7.1:11271221-11271240 | MS.gene018737:CDS | 45.0% |
AAAACCTGCCAATGGACGAG+AGG | - | chr7.1:11271617-11271636 | MS.gene018737:CDS | 50.0% | |
AAACCGGGTGGATATCCAAG+GGG | + | chr7.1:11271911-11271930 | None:intergenic | 50.0% | |
AAAGCCGGGGTTATAGAGCT+TGG | - | chr7.1:11271183-11271202 | MS.gene018737:CDS | 50.0% | |
AAGATTCATGGTTGCTGGGG+TGG | - | chr7.1:11270922-11270941 | MS.gene018737:CDS | 50.0% | |
ACACTGTCAGGATCCCAAAG+GGG | - | chr7.1:11270843-11270862 | MS.gene018737:CDS | 50.0% | |
AGAAACCGGGTGGATATCCA+AGG | + | chr7.1:11271913-11271932 | None:intergenic | 50.0% | |
AGAGGGAGAAAACCTGCCAA+TGG | - | chr7.1:11271609-11271628 | MS.gene018737:CDS | 50.0% | |
ATCTACCTCTGGACAGGCTA+AGG | - | chr7.1:11271269-11271288 | MS.gene018737:CDS | 50.0% | |
CCAGCATCAGAAGACCAACT+TGG | + | chr7.1:11271084-11271103 | None:intergenic | 50.0% | |
CGAACCAAGCTCTATAACCC+CGG | + | chr7.1:11271190-11271209 | None:intergenic | 50.0% | |
CTCCATCAGAACTCAAGGAG+GGG | - | chr7.1:11272019-11272038 | MS.gene018737:CDS | 50.0% | |
CTTGGCGCAAACCATGCTTA+TGG | - | chr7.1:11271420-11271439 | MS.gene018737:CDS | 50.0% | |
GAAACCGGGTGGATATCCAA+GGG | + | chr7.1:11271912-11271931 | None:intergenic | 50.0% | |
GACACTGTCAGGATCCCAAA+GGG | - | chr7.1:11270842-11270861 | MS.gene018737:CDS | 50.0% | |
GAGCGGAAGCCTAGAAAAAG+AGG | - | chr7.1:11271591-11271610 | MS.gene018737:CDS | 50.0% | |
GGCCAATGTTTCAACTTCCC+AGG | - | chr7.1:11271977-11271996 | MS.gene018737:CDS | 50.0% | |
GGGAAGATTCATGGTTGCTG+GGG | - | chr7.1:11270919-11270938 | MS.gene018737:CDS | 50.0% | |
GGGGAAGATTCATGGTTGCT+GGG | - | chr7.1:11270918-11270937 | MS.gene018737:CDS | 50.0% | |
GTCCAAGGAATGAGCAGGAA+AGG | - | chr7.1:11270866-11270885 | MS.gene018737:CDS | 50.0% | |
TCATTCCTTGGACCCCCTTT+GGG | + | chr7.1:11270859-11270878 | None:intergenic | 50.0% | |
TCCCTTTCCTGCTCATTCCT+TGG | + | chr7.1:11270871-11270890 | None:intergenic | 50.0% | |
TGGAGAATCTACCTCTGGAC+AGG | - | chr7.1:11271263-11271282 | MS.gene018737:CDS | 50.0% | |
TGGGGAAGATTCATGGTTGC+TGG | - | chr7.1:11270917-11270936 | MS.gene018737:CDS | 50.0% | |
TGTTAGAGTTAGCTGCCCCT+TGG | - | chr7.1:11271893-11271912 | MS.gene018737:CDS | 50.0% | |
TTGAAGCGGAGAGGCAAAGA+CGG | - | chr7.1:11271655-11271674 | MS.gene018737:CDS | 50.0% | |
TTGGATATCCACCCGGTTTC+TGG | - | chr7.1:11271912-11271931 | MS.gene018737:CDS | 50.0% | |
TTGGGCACGAGTTAAGCTTG+GGG | - | chr7.1:11271307-11271326 | MS.gene018737:CDS | 50.0% | |
! | AATTCTTCCAACGGGGGTGT+AGG | - | chr7.1:11271444-11271463 | MS.gene018737:CDS | 50.0% |
! | GAACTACGCGATTTTGTGGC+AGG | - | chr7.1:11270774-11270793 | MS.gene018737:CDS | 50.0% |
! | TTCCCCTCCTTGAGTTCTGA+TGG | + | chr7.1:11272024-11272043 | None:intergenic | 50.0% |
!! | CAGGTTGCCGGTTTGAAATC+CGG | - | chr7.1:11270793-11270812 | MS.gene018737:CDS | 50.0% |
!! | CCAAGTTGGTCTTCTGATGC+TGG | - | chr7.1:11271081-11271100 | MS.gene018737:CDS | 50.0% |
!! | TCGTTTCTGGCTAAATCGGC+TGG | - | chr7.1:11271132-11271151 | MS.gene018737:CDS | 50.0% |
ATACGGTGAGGGACACTGTC+AGG | - | chr7.1:11270831-11270850 | MS.gene018737:CDS | 55.0% | |
CACTGTCAGGATCCCAAAGG+GGG | - | chr7.1:11270844-11270863 | MS.gene018737:CDS | 55.0% | |
CAGTGGTTCCTCTCGTCCAT+TGG | + | chr7.1:11271628-11271647 | None:intergenic | 55.0% | |
CTCATTCCTTGGACCCCCTT+TGG | + | chr7.1:11270860-11270879 | None:intergenic | 55.0% | |
GAAGACTCCTCCTCACCTCT+TGG | - | chr7.1:11271564-11271583 | MS.gene018737:CDS | 55.0% | |
GAGATGGTGCCTGAAGAGCA+AGG | - | chr7.1:11271213-11271232 | MS.gene018737:CDS | 55.0% | |
GGACACTGTCAGGATCCCAA+AGG | - | chr7.1:11270841-11270860 | MS.gene018737:CDS | 55.0% | |
TGAAGCGGAGAGGCAAAGAC+GGG | - | chr7.1:11271656-11271675 | MS.gene018737:CDS | 55.0% | |
TGCTACCTTAGCCTGTCCAG+AGG | + | chr7.1:11271277-11271296 | None:intergenic | 55.0% | |
TGGGCACGAGTTAAGCTTGG+GGG | - | chr7.1:11271308-11271327 | MS.gene018737:CDS | 55.0% | |
! | AGAGCTTGGTTCGACGGAGA+TGG | - | chr7.1:11271197-11271216 | MS.gene018737:CDS | 55.0% |
! | GCGATTTTGTGGCAGGTTGC+CGG | - | chr7.1:11270781-11270800 | MS.gene018737:CDS | 55.0% |
!! | GTTGCCGGTTTGAAATCCGG+TGG | - | chr7.1:11270796-11270815 | MS.gene018737:CDS | 55.0% |
AGGATCCCAAAGGGGGTCCA+AGG | - | chr7.1:11270851-11270870 | MS.gene018737:CDS | 60.0% | |
AGGGGGTCCAAGGAATGAGC+AGG | - | chr7.1:11270861-11270880 | MS.gene018737:CDS | 60.0% | |
CCTCACCTCTTGGAGACGAG+CGG | - | chr7.1:11271574-11271593 | MS.gene018737:CDS | 60.0% | |
CTCGTCTCCAAGAGGTGAGG+AGG | + | chr7.1:11271574-11271593 | None:intergenic | 60.0% | |
CTGCCCCTTGGATATCCACC+CGG | - | chr7.1:11271905-11271924 | MS.gene018737:CDS | 60.0% | |
GGGTGTAGGAGACAGCAACG+AGG | - | chr7.1:11271458-11271477 | MS.gene018737:CDS | 60.0% | |
GGTTCCTCTCGTCCATTGGC+AGG | + | chr7.1:11271624-11271643 | None:intergenic | 60.0% | |
CCGCTCGTCTCCAAGAGGTG+AGG | + | chr7.1:11271577-11271596 | None:intergenic | 65.0% | |
GCTGTCTCCTACACCCCCGT+TGG | + | chr7.1:11271454-11271473 | None:intergenic | 65.0% | |
GGCTTCCGCTCGTCTCCAAG+AGG | + | chr7.1:11271582-11271601 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 11270586 | 11272097 | 11270586 | ID=MS.gene018737 |
chr7.1 | mRNA | 11270586 | 11272097 | 11270586 | ID=MS.gene018737.t1;Parent=MS.gene018737 |
chr7.1 | exon | 11270586 | 11272097 | 11270586 | ID=MS.gene018737.t1.exon1;Parent=MS.gene018737.t1 |
chr7.1 | CDS | 11270586 | 11272097 | 11270586 | ID=cds.MS.gene018737.t1;Parent=MS.gene018737.t1 |
Gene Sequence |
Protein sequence |