Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068713.t1 | RHN39861.1 | 96.6 | 701 | 24 | 0 | 1 | 701 | 1 | 701 | 0.00E+00 | 1326.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068713.t1 | P92949 | 58.2 | 708 | 278 | 9 | 6 | 701 | 24 | 725 | 3.2e-231 | 802.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068713.t1 | A0A396GI74 | 96.6 | 701 | 24 | 0 | 1 | 701 | 1 | 701 | 0.0e+00 | 1326.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene068713 | 0.8317 | 1.44E-55 | -1.69E-46 |
| MS.gene055240 | MS.gene068713 | 0.800079 | 1.70E-48 | -1.69E-46 |
| MS.gene056815 | MS.gene068713 | 0.821252 | 4.46E-53 | -1.69E-46 |
| MS.gene059892 | MS.gene068713 | 0.8006 | 1.34E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068713.t1 | MTR_8g028780 | 97.004 | 701 | 21 | 0 | 1 | 701 | 1 | 701 | 0.0 | 1392 |
| MS.gene068713.t1 | MTR_8g028780 | 92.760 | 732 | 22 | 1 | 1 | 701 | 1 | 732 | 0.0 | 1373 |
| MS.gene068713.t1 | MTR_8g028795 | 85.265 | 699 | 99 | 4 | 6 | 701 | 19 | 716 | 0.0 | 1103 |
| MS.gene068713.t1 | MTR_8g031070 | 79.630 | 702 | 59 | 8 | 1 | 701 | 1 | 619 | 0.0 | 1068 |
| MS.gene068713.t1 | MTR_1g100150 | 52.550 | 706 | 326 | 7 | 1 | 701 | 1 | 702 | 0.0 | 753 |
| MS.gene068713.t1 | MTR_1g100130 | 52.691 | 706 | 325 | 7 | 1 | 701 | 6 | 707 | 0.0 | 749 |
| MS.gene068713.t1 | MTR_1g100130 | 56.187 | 598 | 256 | 5 | 107 | 701 | 2 | 596 | 0.0 | 681 |
| MS.gene068713.t1 | MTR_2g028530 | 32.761 | 699 | 408 | 17 | 35 | 699 | 68 | 738 | 2.84e-113 | 358 |
| MS.gene068713.t1 | MTR_4g105080 | 32.812 | 704 | 427 | 16 | 7 | 686 | 8 | 689 | 1.24e-107 | 343 |
| MS.gene068713.t1 | MTR_4g105080 | 34.791 | 526 | 303 | 13 | 185 | 686 | 42 | 551 | 2.48e-93 | 301 |
| MS.gene068713.t1 | MTR_4g109530 | 30.000 | 210 | 106 | 7 | 263 | 445 | 473 | 668 | 1.08e-19 | 94.4 |
| MS.gene068713.t1 | MTR_4g109530 | 30.000 | 210 | 106 | 7 | 263 | 445 | 458 | 653 | 1.31e-19 | 94.4 |
| MS.gene068713.t1 | MTR_8g099030 | 29.808 | 208 | 114 | 6 | 268 | 446 | 559 | 763 | 2.05e-19 | 93.6 |
| MS.gene068713.t1 | MTR_8g028685 | 81.250 | 48 | 9 | 0 | 654 | 701 | 80 | 127 | 8.57e-19 | 83.2 |
| MS.gene068713.t1 | MTR_8g095520 | 27.273 | 220 | 121 | 7 | 268 | 454 | 520 | 733 | 6.44e-18 | 89.0 |
| MS.gene068713.t1 | MTR_3g098380 | 26.818 | 220 | 122 | 8 | 268 | 454 | 541 | 754 | 4.56e-17 | 86.3 |
| MS.gene068713.t1 | MTR_3g098350 | 26.512 | 215 | 117 | 6 | 268 | 446 | 534 | 743 | 4.62e-17 | 86.3 |
| MS.gene068713.t1 | MTR_2g043900 | 27.751 | 209 | 118 | 6 | 268 | 446 | 548 | 753 | 1.06e-16 | 85.1 |
| MS.gene068713.t1 | MTR_2g043900 | 27.751 | 209 | 118 | 6 | 268 | 446 | 548 | 753 | 1.11e-16 | 84.7 |
| MS.gene068713.t1 | MTR_2g043900 | 27.751 | 209 | 118 | 6 | 268 | 446 | 548 | 753 | 1.50e-16 | 84.3 |
| MS.gene068713.t1 | MTR_1g083290 | 25.561 | 223 | 128 | 7 | 259 | 446 | 500 | 719 | 2.78e-16 | 83.6 |
| MS.gene068713.t1 | MTR_7g113130 | 24.171 | 211 | 125 | 6 | 268 | 446 | 524 | 731 | 1.73e-15 | 80.9 |
| MS.gene068713.t1 | MTR_7g113130 | 24.171 | 211 | 125 | 6 | 268 | 446 | 524 | 731 | 2.47e-15 | 80.5 |
| MS.gene068713.t1 | MTR_3g098320 | 25.877 | 228 | 121 | 8 | 268 | 455 | 513 | 732 | 2.26e-14 | 77.4 |
| MS.gene068713.t1 | MTR_3g098320 | 25.877 | 228 | 121 | 8 | 268 | 455 | 522 | 741 | 2.37e-14 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068713.t1 | AT1G01580 | 59.605 | 708 | 268 | 9 | 6 | 701 | 24 | 725 | 0.0 | 831 |
| MS.gene068713.t1 | AT1G01580 | 59.605 | 708 | 268 | 9 | 6 | 701 | 102 | 803 | 0.0 | 831 |
| MS.gene068713.t1 | AT1G01590 | 53.361 | 714 | 305 | 13 | 1 | 701 | 6 | 704 | 0.0 | 749 |
| MS.gene068713.t1 | AT1G23020 | 52.714 | 700 | 310 | 9 | 6 | 701 | 35 | 717 | 0.0 | 726 |
| MS.gene068713.t1 | AT1G23020 | 52.714 | 700 | 310 | 9 | 6 | 701 | 12 | 694 | 0.0 | 725 |
| MS.gene068713.t1 | AT1G23020 | 52.782 | 701 | 307 | 11 | 6 | 701 | 35 | 716 | 0.0 | 723 |
| MS.gene068713.t1 | AT1G23020 | 52.782 | 701 | 307 | 11 | 6 | 701 | 35 | 716 | 0.0 | 723 |
| MS.gene068713.t1 | AT1G23020 | 52.790 | 699 | 307 | 10 | 6 | 701 | 12 | 690 | 0.0 | 722 |
| MS.gene068713.t1 | AT1G23020 | 52.782 | 701 | 307 | 11 | 6 | 701 | 12 | 693 | 0.0 | 722 |
| MS.gene068713.t1 | AT1G23020 | 52.782 | 701 | 307 | 11 | 6 | 701 | 12 | 693 | 0.0 | 722 |
| MS.gene068713.t1 | AT5G23990 | 49.929 | 705 | 334 | 8 | 6 | 701 | 5 | 699 | 0.0 | 705 |
| MS.gene068713.t1 | AT5G23980 | 49.929 | 705 | 334 | 8 | 6 | 701 | 5 | 699 | 0.0 | 702 |
| MS.gene068713.t1 | AT5G23990 | 45.532 | 705 | 323 | 9 | 6 | 701 | 5 | 657 | 0.0 | 616 |
| MS.gene068713.t1 | AT5G23990 | 52.878 | 556 | 251 | 5 | 155 | 701 | 14 | 567 | 0.0 | 602 |
| MS.gene068713.t1 | AT5G50160 | 30.435 | 736 | 432 | 18 | 18 | 700 | 19 | 727 | 4.28e-108 | 344 |
| MS.gene068713.t1 | AT5G49730 | 31.868 | 728 | 442 | 19 | 8 | 699 | 27 | 736 | 2.35e-105 | 337 |
| MS.gene068713.t1 | AT5G49740 | 30.411 | 730 | 452 | 17 | 8 | 699 | 34 | 745 | 4.31e-104 | 334 |
| MS.gene068713.t1 | AT5G49740 | 30.246 | 691 | 436 | 15 | 8 | 670 | 34 | 706 | 1.53e-100 | 324 |
| MS.gene068713.t1 | AT5G49730 | 35.547 | 512 | 305 | 10 | 8 | 502 | 27 | 530 | 3.97e-98 | 313 |
| MS.gene068713.t1 | AT5G49740 | 34.302 | 516 | 308 | 11 | 8 | 502 | 34 | 539 | 9.80e-96 | 306 |
| MS.gene068713.t1 | AT5G50160 | 30.824 | 558 | 313 | 14 | 196 | 700 | 11 | 548 | 6.70e-85 | 278 |
| MS.gene068713.t1 | AT1G19230 | 29.762 | 252 | 141 | 6 | 261 | 481 | 536 | 782 | 9.91e-24 | 107 |
| MS.gene068713.t1 | AT1G19230 | 29.762 | 252 | 141 | 6 | 261 | 481 | 562 | 808 | 1.26e-23 | 107 |
| MS.gene068713.t1 | AT4G25090 | 29.187 | 209 | 120 | 6 | 268 | 451 | 484 | 689 | 1.90e-21 | 100 |
| MS.gene068713.t1 | AT4G25090 | 29.187 | 209 | 120 | 6 | 268 | 451 | 472 | 677 | 2.53e-21 | 99.8 |
| MS.gene068713.t1 | AT1G64060 | 30.342 | 234 | 128 | 8 | 268 | 472 | 565 | 792 | 1.70e-20 | 97.4 |
| MS.gene068713.t1 | AT5G47910 | 28.230 | 209 | 117 | 6 | 268 | 446 | 554 | 759 | 7.40e-19 | 92.0 |
| MS.gene068713.t1 | AT1G09090 | 29.148 | 223 | 121 | 8 | 258 | 446 | 465 | 684 | 1.19e-18 | 91.3 |
| MS.gene068713.t1 | AT5G51060 | 26.364 | 220 | 124 | 8 | 268 | 455 | 531 | 744 | 1.52e-17 | 87.8 |
| MS.gene068713.t1 | AT5G07390 | 27.358 | 212 | 118 | 6 | 268 | 446 | 490 | 698 | 1.14e-16 | 84.7 |
| MS.gene068713.t1 | AT5G07390 | 27.358 | 212 | 118 | 6 | 268 | 446 | 522 | 730 | 1.22e-16 | 84.7 |
| MS.gene068713.t1 | AT4G11230 | 29.268 | 205 | 104 | 7 | 303 | 489 | 597 | 778 | 1.49e-16 | 84.7 |
| MS.gene068713.t1 | AT3G45810 | 26.638 | 229 | 123 | 6 | 260 | 446 | 497 | 722 | 3.71e-12 | 70.5 |
| MS.gene068713.t1 | AT1G09090 | 29.032 | 155 | 93 | 5 | 258 | 398 | 465 | 616 | 3.22e-11 | 67.0 |
Find 153 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGTGGTGCTGTTGTTTC+TGG | 0.048121 | 8.3:-64544490 | MS.gene068713:CDS |
| CAATATTCTCGGATCCTTTA+AGG | 0.086839 | 8.3:-64540745 | MS.gene068713:CDS |
| GGACTTCTATTTGAAATAAA+AGG | 0.154842 | 8.3:-64540365 | MS.gene068713:CDS |
| GATTTGATCCTACCAATTTC+TGG | 0.166442 | 8.3:-64541028 | MS.gene068713:CDS |
| CCCTAGTTTCTACCTCTTCT+TGG | 0.174450 | 8.3:-64541972 | MS.gene068713:CDS |
| AGTGTGGGAGTTCTTGTTTC+AGG | 0.196177 | 8.3:-64540338 | MS.gene068713:CDS |
| TGTTACTTCTAATAGTAAAT+TGG | 0.207270 | 8.3:-64541598 | MS.gene068713:CDS |
| GTTGCATCAAGTATCATATT+TGG | 0.222234 | 8.3:-64542966 | MS.gene068713:CDS |
| AAGGCTGATCCTACCTATTT+TGG | 0.222309 | 8.3:-64544396 | MS.gene068713:CDS |
| CAAATACTTTCAATCTAAAA+TGG | 0.223646 | 8.3:-64544437 | MS.gene068713:CDS |
| TGGGGATGAATTGGAGTATC+TGG | 0.239412 | 8.3:+64540938 | None:intergenic |
| TCATCTGTGCTACCAATATT+TGG | 0.246300 | 8.3:-64543003 | MS.gene068713:CDS |
| CTATTAGAAGTAACAGTAAA+TGG | 0.254634 | 8.3:+64541606 | None:intergenic |
| ACTTCCTGCCTCATTTGTTT+TGG | 0.255207 | 8.3:+64540314 | None:intergenic |
| TGTTCTTGAATGAAGAAATT+AGG | 0.262375 | 8.3:+64541071 | None:intergenic |
| TCATTAAATGTGGAGGAAAT+TGG | 0.269799 | 8.3:-64541554 | MS.gene068713:CDS |
| CAAAGTTGGAGTATCAAATT+TGG | 0.274753 | 8.3:-64542158 | MS.gene068713:CDS |
| TTTCAAGTGTAGCTGTCTTA+TGG | 0.275222 | 8.3:-64540679 | MS.gene068713:CDS |
| TATACCTTGTGCACCAAAAT+AGG | 0.277983 | 8.3:+64544383 | None:intergenic |
| GTTGCATCCATTTGCTCATC+TGG | 0.279872 | 8.3:-64540293 | MS.gene068713:CDS |
| ATGTTTAGGAACGCCCTTAA+AGG | 0.285074 | 8.3:+64540731 | None:intergenic |
| AGATGTAGACCTTAGGTAAT+TGG | 0.289379 | 8.3:+64541443 | None:intergenic |
| ATCATCTTCCTAATTATAAT+CGG | 0.294324 | 8.3:-64540815 | MS.gene068713:CDS |
| ATTTATTGCAGATGTTGATA+TGG | 0.295928 | 8.3:-64542183 | MS.gene068713:intron |
| TTGGCTTAAGCCATAGAGTT+TGG | 0.301650 | 8.3:+64540918 | None:intergenic |
| TTGCAACCATTCCCAAAATT+AGG | 0.301865 | 8.3:-64542096 | MS.gene068713:CDS |
| GGAGAGATATCTTTGCTTGC+TGG | 0.309354 | 8.3:-64542133 | MS.gene068713:CDS |
| TCAATCTATAATAAGGTTAT+TGG | 0.310440 | 8.3:-64544508 | MS.gene068713:CDS |
| AACCGTCCAATGCTTGTAAA+AGG | 0.316685 | 8.3:-64543995 | MS.gene068713:CDS |
| ATGTCACATGTGCCAGAAAT+TGG | 0.325741 | 8.3:+64541016 | None:intergenic |
| TGTAGAACTCAACTTCTCTA+AGG | 0.326624 | 8.3:-64541873 | MS.gene068713:CDS |
| TGTTCATTGCTCTTCTTGTT+TGG | 0.326969 | 8.3:-64543928 | MS.gene068713:CDS |
| TGGCTTAAGCCATAGAGTTT+GGG | 0.327218 | 8.3:+64540919 | None:intergenic |
| TCCTAAGGTTCTTACAATCT+AGG | 0.337184 | 8.3:-64541940 | MS.gene068713:CDS |
| TAATGACCCCGATTATAATT+AGG | 0.337889 | 8.3:+64540807 | None:intergenic |
| GTGAGGCTCAATCTATAATA+AGG | 0.341776 | 8.3:-64544515 | MS.gene068713:CDS |
| ATCTAGGCGCGGTGTTCGTT+TGG | 0.341838 | 8.3:-64541924 | MS.gene068713:CDS |
| AGTCTTGTTAATAGCTACTT+TGG | 0.343222 | 8.3:-64544210 | MS.gene068713:CDS |
| CAAATTTGATACTCCAACTT+TGG | 0.350831 | 8.3:+64542159 | None:intergenic |
| ATATCTGTTGAAGGTCCTTA+TGG | 0.351254 | 8.3:-64541477 | MS.gene068713:CDS |
| AGTTGTATAGTGTGGGAATA+TGG | 0.354213 | 8.3:-64543083 | MS.gene068713:CDS |
| GCTTGCTGGTTTGTTCTTGT+GGG | 0.356226 | 8.3:-64542119 | MS.gene068713:CDS |
| ATTGGTTCATCGGATGGATT+TGG | 0.364051 | 8.3:+64540899 | None:intergenic |
| CAATTCATCCCCAAACTCTA+TGG | 0.364176 | 8.3:-64540928 | MS.gene068713:CDS |
| CTTTCAAATCCTTCGCCTAT+CGG | 0.368684 | 8.3:-64541510 | MS.gene068713:CDS |
| TGCTTGCTGGTTTGTTCTTG+TGG | 0.371299 | 8.3:-64542120 | MS.gene068713:CDS |
| TTGGTGGTGCTGTTGTTTCT+GGG | 0.377746 | 8.3:-64544489 | MS.gene068713:CDS |
| GTCTTGTTAATAGCTACTTT+GGG | 0.378957 | 8.3:-64544209 | MS.gene068713:CDS |
| AATATTCTCGGATCCTTTAA+GGG | 0.379920 | 8.3:-64540744 | MS.gene068713:CDS |
| TTTAGATTGAAAGTATTTGT+AGG | 0.383540 | 8.3:+64544441 | None:intergenic |
| GGAATATGGTTAGGTCTTGT+TGG | 0.389598 | 8.3:-64543069 | MS.gene068713:CDS |
| GAAGAAATTAGGACAATGTT+TGG | 0.390489 | 8.3:+64541082 | None:intergenic |
| GAAGCCACCAATGTGCATTA+TGG | 0.392459 | 8.3:-64540527 | MS.gene068713:CDS |
| CACATATTACTAGCATGTTT+AGG | 0.401415 | 8.3:+64540717 | None:intergenic |
| CATAGAGTTTGGGGATGAAT+TGG | 0.401457 | 8.3:+64540929 | None:intergenic |
| CCAAACACTTGGCTTTGGCT+TGG | 0.403131 | 8.3:-64540860 | MS.gene068713:CDS |
| TAGGTCCAAACACTTGGCTT+TGG | 0.411996 | 8.3:-64540865 | MS.gene068713:CDS |
| TTTGCACAATCAGTCGTAAT+GGG | 0.416566 | 8.3:-64544042 | MS.gene068713:intron |
| TCTTGTTGGGAACATATGTT+TGG | 0.419914 | 8.3:-64543055 | MS.gene068713:CDS |
| TCATCTTCCTAATTATAATC+GGG | 0.424758 | 8.3:-64540814 | MS.gene068713:CDS |
| GGACCTAACATAGCATGTAT+TGG | 0.425959 | 8.3:+64540881 | None:intergenic |
| GAACCAATACATGCTATGTT+AGG | 0.426876 | 8.3:-64540884 | MS.gene068713:CDS |
| CCAAGCCAAAGCCAAGTGTT+TGG | 0.427284 | 8.3:+64540860 | None:intergenic |
| TTTATGAACATTACACTTGT+GGG | 0.427345 | 8.3:+64541660 | None:intergenic |
| TCAGAAGTGAGGCCAAATAT+TGG | 0.428860 | 8.3:+64542991 | None:intergenic |
| GAATTTGTTACATCATCCAT+TGG | 0.432515 | 8.3:-64542906 | MS.gene068713:CDS |
| GCTTCAACAAGGGACTGATA+TGG | 0.444092 | 8.3:+64540545 | None:intergenic |
| ATCAAGTATCATATTTGGCT+TGG | 0.445757 | 8.3:-64542961 | MS.gene068713:CDS |
| AGCGAAACAGATTCAGAACT+TGG | 0.447743 | 8.3:-64540636 | MS.gene068713:CDS |
| GCGAAGGATTTGAAAGCAAC+TGG | 0.456692 | 8.3:+64541517 | None:intergenic |
| TAATATTCAACTCCAAATTG+AGG | 0.460431 | 8.3:-64540990 | MS.gene068713:CDS |
| GCATTATAAATCGTTGAACT+TGG | 0.460573 | 8.3:+64540590 | None:intergenic |
| AACTAAACCAGATGAGCAAA+TGG | 0.468218 | 8.3:+64540286 | None:intergenic |
| AAGCATTGGACGGTTCCATA+TGG | 0.468549 | 8.3:+64544003 | None:intergenic |
| AAAGTAGCTATTAACAAGAC+TGG | 0.468699 | 8.3:+64544212 | None:intergenic |
| GAATATGGTTAGGTCTTGTT+GGG | 0.469125 | 8.3:-64543068 | MS.gene068713:CDS |
| GCAAGAGAAGTTGTATAGTG+TGG | 0.469438 | 8.3:-64543091 | MS.gene068713:CDS |
| GACTTCTATTTGAAATAAAA+GGG | 0.470059 | 8.3:-64540364 | MS.gene068713:CDS |
| CGCCTTGGAATATCTGTTGA+AGG | 0.470730 | 8.3:-64541486 | MS.gene068713:CDS |
| CTATGTTAGGTCCAAACACT+TGG | 0.472681 | 8.3:-64540871 | MS.gene068713:CDS |
| CATAGCATGTATTGGTTCAT+CGG | 0.476192 | 8.3:+64540889 | None:intergenic |
| AGACTGGAAAAGTGTACATA+AGG | 0.479175 | 8.3:+64544228 | None:intergenic |
| CACATTGGTGGCTTCAACAA+GGG | 0.482039 | 8.3:+64540535 | None:intergenic |
| AATTTGTTACATCATCCATT+GGG | 0.484395 | 8.3:-64542905 | MS.gene068713:CDS |
| GTGTGATGTATGCCTCAATT+TGG | 0.484646 | 8.3:+64540978 | None:intergenic |
| GCCTAGATTGTAAGAACCTT+AGG | 0.488391 | 8.3:+64541939 | None:intergenic |
| TATAGTGTGGGAATATGGTT+AGG | 0.492943 | 8.3:-64543078 | MS.gene068713:CDS |
| TTGGTTGAAGCAGGTCCATA+AGG | 0.493515 | 8.3:+64541462 | None:intergenic |
| CATTGCAACTTTGATATGCT+TGG | 0.494130 | 8.3:+64541633 | None:intergenic |
| CTTAGGTAATTGGTTGAAGC+AGG | 0.494748 | 8.3:+64541453 | None:intergenic |
| CCTTCGCCTATCGGTCGCCT+TGG | 0.496053 | 8.3:-64541501 | MS.gene068713:CDS |
| TAACACGAATGCAATATTCT+CGG | 0.497622 | 8.3:-64540756 | MS.gene068713:CDS |
| ACCAAGAAGAGGTAGAAACT+AGG | 0.499474 | 8.3:+64541971 | None:intergenic |
| GTTGGAGTATCAAATTTGGC+TGG | 0.503021 | 8.3:-64542154 | MS.gene068713:CDS |
| CCAAGAAGAGGTAGAAACTA+GGG | 0.503705 | 8.3:+64541972 | None:intergenic |
| TCTTGGTTGATCGTTTCCTA+AGG | 0.507895 | 8.3:-64541955 | MS.gene068713:CDS |
| ATCTATAATAAGGTTATTGG+TGG | 0.512827 | 8.3:-64544505 | MS.gene068713:CDS |
| AGAAACATGGGACAACCATA+TGG | 0.513216 | 8.3:-64544018 | MS.gene068713:CDS |
| ATTTATGAACATTACACTTG+TGG | 0.514646 | 8.3:+64541659 | None:intergenic |
| GCATGTATTGGTTCATCGGA+TGG | 0.517956 | 8.3:+64540893 | None:intergenic |
| ATATTTGGCCTCACTTCTGA+AGG | 0.519844 | 8.3:-64542988 | MS.gene068713:CDS |
| CAAGAGAAGTTGTATAGTGT+GGG | 0.522227 | 8.3:-64543090 | MS.gene068713:CDS |
| CATTCGTGTTATGATCGATC+GGG | 0.527325 | 8.3:+64540768 | None:intergenic |
| AGGGAGCATAGTGAAGGAAA+AGG | 0.527997 | 8.3:+64541991 | None:intergenic |
| GATATTCCAAGGCGACCGAT+AGG | 0.539195 | 8.3:+64541495 | None:intergenic |
| TTGACCATAATGCACATTGG+TGG | 0.539301 | 8.3:+64540523 | None:intergenic |
| TGAAATAAAAGGGTCAAGTG+TGG | 0.543179 | 8.3:-64540354 | MS.gene068713:CDS |
| GAAATAAAAGGGTCAAGTGT+GGG | 0.545425 | 8.3:-64540353 | MS.gene068713:CDS |
| CTAAGTGTTGTCATTAAATG+TGG | 0.546157 | 8.3:-64541564 | MS.gene068713:CDS |
| GGCTTAAGCCATAGAGTTTG+GGG | 0.548872 | 8.3:+64540920 | None:intergenic |
| ATGTTGATATGGACCAAAGT+TGG | 0.550286 | 8.3:-64542172 | MS.gene068713:CDS |
| GCATTCGTGTTATGATCGAT+CGG | 0.552112 | 8.3:+64540767 | None:intergenic |
| ACAGATGATCCACGTGTCAC+CGG | 0.553412 | 8.3:+64543018 | None:intergenic |
| TTTCAGGACCAAAACAAATG+AGG | 0.556179 | 8.3:-64540322 | MS.gene068713:CDS |
| AAACAGATTCAGAACTTGGA+AGG | 0.559017 | 8.3:-64540632 | MS.gene068713:CDS |
| AGTCGTAATGGGAAGAAACA+TGG | 0.559139 | 8.3:-64544031 | MS.gene068713:CDS |
| AGGACCAAAACAAATGAGGC+AGG | 0.565726 | 8.3:-64540318 | MS.gene068713:CDS |
| CTGCTTCAACCAATTACCTA+AGG | 0.570182 | 8.3:-64541452 | MS.gene068713:intron |
| TTGGCTTGGACACATGCTCA+TGG | 0.581558 | 8.3:-64542947 | MS.gene068713:CDS |
| GTGATGGTGAGTGGAGGAAG+TGG | 0.581992 | 8.3:-64541172 | MS.gene068713:CDS |
| CTCAACTTCTCTAAGGGACA+TGG | 0.582348 | 8.3:-64541866 | MS.gene068713:intron |
| CAAGCATATCAAAGTTGCAA+TGG | 0.585060 | 8.3:-64541632 | MS.gene068713:CDS |
| ATGCTTGTAAAAGGACCACT+TGG | 0.586115 | 8.3:-64543986 | MS.gene068713:CDS |
| GTAGAACTCAACTTCTCTAA+GGG | 0.587760 | 8.3:-64541872 | MS.gene068713:CDS |
| TTTGATTAGTAGATGCCCAA+TGG | 0.593677 | 8.3:+64542890 | None:intergenic |
| AGATGATGAAGATTATGTAG+AGG | 0.593678 | 8.3:+64542038 | None:intergenic |
| AATTAGGAAGATGATGAATG+AGG | 0.596393 | 8.3:+64540823 | None:intergenic |
| GCACATTGGTGGCTTCAACA+AGG | 0.598989 | 8.3:+64540534 | None:intergenic |
| GACCTTCAACAGATATTCCA+AGG | 0.601000 | 8.3:+64541484 | None:intergenic |
| CCAAGGCGACCGATAGGCGA+AGG | 0.603236 | 8.3:+64541501 | None:intergenic |
| TTTACAACTTATTTGCACAT+CGG | 0.603937 | 8.3:-64543902 | MS.gene068713:CDS |
| GACACACTTGTGATGGTGAG+TGG | 0.610694 | 8.3:-64541181 | MS.gene068713:CDS |
| CCTTGTGCACCAAAATAGGT+AGG | 0.611441 | 8.3:+64544387 | None:intergenic |
| AGGTAGGATCAGCCTTGCCA+CGG | 0.616622 | 8.3:+64544403 | None:intergenic |
| AGTGTTGTCATTAAATGTGG+AGG | 0.622671 | 8.3:-64541561 | MS.gene068713:CDS |
| CATCTTCCTAATTATAATCG+GGG | 0.623767 | 8.3:-64540813 | MS.gene068713:CDS |
| GTTGAACTTGGTGAGACTGT+TGG | 0.624890 | 8.3:+64540602 | None:intergenic |
| GTTGCCTAAAATCCGTGGCA+AGG | 0.630628 | 8.3:-64544415 | MS.gene068713:CDS |
| CACATGTGCCAGAAATTGGT+AGG | 0.631801 | 8.3:+64541020 | None:intergenic |
| AACAGATTCAGAACTTGGAA+GGG | 0.636327 | 8.3:-64540631 | MS.gene068713:CDS |
| GGAAACGATCAACCAAGAAG+AGG | 0.638587 | 8.3:+64541960 | None:intergenic |
| CAACAAGGGACTGATATGGA+AGG | 0.639217 | 8.3:+64540549 | None:intergenic |
| GTCGTAATGGGAAGAAACAT+GGG | 0.641838 | 8.3:-64544030 | MS.gene068713:CDS |
| ATCTACTAATCAAATGTCAG+AGG | 0.642524 | 8.3:-64542881 | MS.gene068713:intron |
| GAAACTAGGGAGCATAGTGA+AGG | 0.643522 | 8.3:+64541985 | None:intergenic |
| AAATGGTTGCCTAAAATCCG+TGG | 0.643527 | 8.3:-64544420 | MS.gene068713:CDS |
| TCTTTGACCATAATGCACAT+TGG | 0.653833 | 8.3:+64540520 | None:intergenic |
| GTGATAGAAACAATTCCAAG+TGG | 0.660807 | 8.3:+64543971 | None:intergenic |
| TGATGCAACCTTCAGAAGTG+AGG | 0.667104 | 8.3:+64542980 | None:intergenic |
| CAGGCATGACACACTTGTGA+TGG | 0.673949 | 8.3:-64541188 | MS.gene068713:CDS |
| TTGAGTTCTACACCTTCACA+AGG | 0.680447 | 8.3:+64541884 | None:intergenic |
| AGGTTCTTACAATCTAGGCG+CGG | 0.708377 | 8.3:-64541935 | MS.gene068713:CDS |
| ACACTTGTGATGGTGAGTGG+AGG | 0.758886 | 8.3:-64541178 | MS.gene068713:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTCCTTATTAAAAAA+TGG | - | chr8.3:64542489-64542508 | MS.gene068713:intron | 10.0% |
| !!! | AATACAATATTTTTAGTAAT+TGG | + | chr8.3:64541435-64541454 | None:intergenic | 10.0% |
| !!! | TCTGTTTTTATTTTTTATTA+AGG | + | chr8.3:64541205-64541224 | None:intergenic | 10.0% |
| !! | ACAATATAAAGACAAAAATA+AGG | + | chr8.3:64542540-64542559 | None:intergenic | 15.0% |
| !! | TCAAATAAATTAATTCGAAT+AGG | + | chr8.3:64542962-64542981 | None:intergenic | 15.0% |
| !! | TCTCTAATAATTGAAAAAAA+CGG | + | chr8.3:64543630-64543649 | None:intergenic | 15.0% |
| !!! | AAATAATCTTGTTTACAAAA+AGG | - | chr8.3:64541032-64541051 | MS.gene068713:CDS | 15.0% |
| !!! | ACATTTTCCATTTTTTAATA+AGG | + | chr8.3:64542499-64542518 | None:intergenic | 15.0% |
| !! | AAAAGTCAATATTCAATCTA+AGG | + | chr8.3:64542253-64542272 | None:intergenic | 20.0% |
| !! | AAGATTAATTATGAAGTTGA+CGG | + | chr8.3:64541235-64541254 | None:intergenic | 20.0% |
| !! | ACGTAAAAAGTTTAAACAAT+CGG | - | chr8.3:64543386-64543405 | MS.gene068713:intron | 20.0% |
| !! | ATCATCTTCCTAATTATAAT+CGG | - | chr8.3:64543954-64543973 | MS.gene068713:CDS | 20.0% |
| !! | CAAATACTTTCAATCTAAAA+TGG | - | chr8.3:64540332-64540351 | MS.gene068713:CDS | 20.0% |
| !! | CAACTTCATAATTAATCTTA+TGG | - | chr8.3:64541236-64541255 | MS.gene068713:intron | 20.0% |
| !! | TAAATATTGAATTGCATTTG+TGG | - | chr8.3:64541349-64541368 | MS.gene068713:intron | 20.0% |
| !! | TAACTCTTAAATTAAATCAC+AGG | + | chr8.3:64541963-64541982 | None:intergenic | 20.0% |
| !! | TCAATCTATAATAAGGTTAT+TGG | - | chr8.3:64540261-64540280 | MS.gene068713:CDS | 20.0% |
| !! | TCTTATCATACCTATTAATT+AGG | - | chr8.3:64541068-64541087 | MS.gene068713:CDS | 20.0% |
| !! | TGATTCAAAACCTAATTAAT+AGG | + | chr8.3:64541081-64541100 | None:intergenic | 20.0% |
| !! | TTAATCTTAATCTTACTCTT+GGG | + | chr8.3:64541987-64542006 | None:intergenic | 20.0% |
| !! | TTTAATCTTAATCTTACTCT+TGG | + | chr8.3:64541988-64542007 | None:intergenic | 20.0% |
| !!! | AAAGAATTTTCTCCTAATTT+TGG | + | chr8.3:64542688-64542707 | None:intergenic | 20.0% |
| !!! | AAGAATTTTCTCCTAATTTT+GGG | + | chr8.3:64542687-64542706 | None:intergenic | 20.0% |
| !!! | AGGAATTTTTTTATGTGAAT+TGG | + | chr8.3:64542479-64542498 | None:intergenic | 20.0% |
| !!! | CATAACTTTTCACAATATTT+TGG | + | chr8.3:64541400-64541419 | None:intergenic | 20.0% |
| !!! | CATATAATTGTTCTTATTTC+AGG | - | chr8.3:64540509-64540528 | MS.gene068713:CDS | 20.0% |
| !!! | GACTTCTATTTGAAATAAAA+GGG | - | chr8.3:64544405-64544424 | MS.gene068713:CDS | 20.0% |
| !!! | GGAATTTTTTTATGTGAATT+GGG | + | chr8.3:64542478-64542497 | None:intergenic | 20.0% |
| !!! | TGTTACTTCTAATAGTAAAT+TGG | - | chr8.3:64543171-64543190 | MS.gene068713:intron | 20.0% |
| !!! | TTTAGATTGAAAGTATTTGT+AGG | + | chr8.3:64540331-64540350 | None:intergenic | 20.0% |
| !!! | TTTATATTGTATTTAGCTCA+CGG | - | chr8.3:64542550-64542569 | MS.gene068713:intron | 20.0% |
| ! | AAATAGGGATAACTAGATTA+AGG | + | chr8.3:64540657-64540676 | None:intergenic | 25.0% |
| ! | AAATTAAATCACAGGTAAGT+AGG | + | chr8.3:64541955-64541974 | None:intergenic | 25.0% |
| ! | AAGGTTAAACATCCTAATTA+CGG | - | chr8.3:64541311-64541330 | MS.gene068713:intron | 25.0% |
| ! | AATTAAATCACAGGTAAGTA+GGG | + | chr8.3:64541954-64541973 | None:intergenic | 25.0% |
| ! | AATTAGAGTATAGCACAAAT+AGG | + | chr8.3:64540673-64540692 | None:intergenic | 25.0% |
| ! | AGTCAAAGCAAAACTTTATA+TGG | + | chr8.3:64542173-64542192 | None:intergenic | 25.0% |
| ! | ATCAATTATAATCAAGACCA+AGG | - | chr8.3:64541921-64541940 | MS.gene068713:CDS | 25.0% |
| ! | ATCTATAATAAGGTTATTGG+TGG | - | chr8.3:64540264-64540283 | MS.gene068713:CDS | 25.0% |
| ! | ATTAGAGTATAGCACAAATA+GGG | + | chr8.3:64540672-64540691 | None:intergenic | 25.0% |
| ! | ATTTATGAACATTACACTTG+TGG | + | chr8.3:64543113-64543132 | None:intergenic | 25.0% |
| ! | ATTTATTGCAGATGTTGATA+TGG | - | chr8.3:64542586-64542605 | MS.gene068713:intron | 25.0% |
| ! | CTATTAGAAGTAACAGTAAA+TGG | + | chr8.3:64543166-64543185 | None:intergenic | 25.0% |
| ! | GAGCTTAAAGAAATTACTTA+TGG | - | chr8.3:64543010-64543029 | MS.gene068713:CDS | 25.0% |
| ! | GTTCAATTCATAGAGATAAA+TGG | + | chr8.3:64544364-64544383 | None:intergenic | 25.0% |
| ! | TAAAACAGTCTCAAAAATAG+CGG | - | chr8.3:64540893-64540912 | MS.gene068713:CDS | 25.0% |
| ! | TAAACCTTAAAAATACCATG+TGG | - | chr8.3:64541273-64541292 | MS.gene068713:intron | 25.0% |
| ! | TAATATTCAACTCCAAATTG+AGG | - | chr8.3:64543779-64543798 | MS.gene068713:intron | 25.0% |
| ! | TACATCTTATCTATATCGAA+GGG | - | chr8.3:64543342-64543361 | MS.gene068713:intron | 25.0% |
| ! | TAGGATGTTTAACCTTTAAT+AGG | + | chr8.3:64541307-64541326 | None:intergenic | 25.0% |
| ! | TAGGGTTTAATTCATATAGA+CGG | + | chr8.3:64543471-64543490 | None:intergenic | 25.0% |
| ! | TATTAACACTCAATGAACAA+TGG | - | chr8.3:64542365-64542384 | MS.gene068713:intron | 25.0% |
| ! | TCATCTTCCTAATTATAATC+GGG | - | chr8.3:64543955-64543974 | MS.gene068713:CDS | 25.0% |
| ! | TGTTCTTGAATGAAGAAATT+AGG | + | chr8.3:64543701-64543720 | None:intergenic | 25.0% |
| ! | TTATCTTAAAGTAAACTCGT+AGG | - | chr8.3:64542935-64542954 | MS.gene068713:CDS | 25.0% |
| ! | TTTACAACTTATTTGCACAT+CGG | - | chr8.3:64540867-64540886 | MS.gene068713:CDS | 25.0% |
| ! | TTTATGAACATTACACTTGT+GGG | + | chr8.3:64543112-64543131 | None:intergenic | 25.0% |
| !! | GGACTTCTATTTGAAATAAA+AGG | - | chr8.3:64544404-64544423 | MS.gene068713:CDS | 25.0% |
| !! | TACATTTTCTTAGCAACAAA+AGG | + | chr8.3:64542037-64542056 | None:intergenic | 25.0% |
| !! | TTATATTGTATTTAGCTCAC+GGG | - | chr8.3:64542551-64542570 | MS.gene068713:intron | 25.0% |
| !! | TTGAATCAATCAGTTTTACT+TGG | - | chr8.3:64544519-64544538 | MS.gene068713:CDS | 25.0% |
| !!! | AATGTGATATGTTTTTTGCA+GGG | - | chr8.3:64543074-64543093 | MS.gene068713:CDS | 25.0% |
| !!! | AATTATTTCTGCAAAGCAAA+AGG | + | chr8.3:64543521-64543540 | None:intergenic | 25.0% |
| !!! | AATTTGTTACATCATCCATT+GGG | - | chr8.3:64541864-64541883 | MS.gene068713:intron | 25.0% |
| !!! | ACATGGTATTTTTAAGGTTT+AGG | + | chr8.3:64541274-64541293 | None:intergenic | 25.0% |
| !!! | ATTCGAGTTGTCTATATAAA+AGG | - | chr8.3:64541171-64541190 | MS.gene068713:CDS | 25.0% |
| !!! | ATTTTTAAGGTTTAGGTCTT+TGG | + | chr8.3:64541267-64541286 | None:intergenic | 25.0% |
| !!! | CTCACTCTTTTTTTTTTAAC+AGG | - | chr8.3:64544383-64544402 | MS.gene068713:intron | 25.0% |
| !!! | TAATGTGATATGTTTTTTGC+AGG | - | chr8.3:64543073-64543092 | MS.gene068713:CDS | 25.0% |
| !!! | TTCTGGGTTTTATTATGATT+TGG | - | chr8.3:64540296-64540315 | MS.gene068713:CDS | 25.0% |
| !!! | TTTTTAAGGTTTAGGTCTTT+GGG | + | chr8.3:64541266-64541285 | None:intergenic | 25.0% |
| AAAGTAGCTATTAACAAGAC+TGG | + | chr8.3:64540560-64540579 | None:intergenic | 30.0% | |
| AATATTCTCGGATCCTTTAA+GGG | - | chr8.3:64544025-64544044 | MS.gene068713:CDS | 30.0% | |
| AATTAGGAAGATGATGAATG+AGG | + | chr8.3:64543949-64543968 | None:intergenic | 30.0% | |
| AGATCACTCACTAATTAAAG+AGG | + | chr8.3:64542334-64542353 | None:intergenic | 30.0% | |
| AGATGATGAAGATTATGTAG+AGG | + | chr8.3:64542734-64542753 | None:intergenic | 30.0% | |
| ATAGATAAGATGTAGACCTT+AGG | + | chr8.3:64543336-64543355 | None:intergenic | 30.0% | |
| ATCAAGTATCATATTTGGCT+TGG | - | chr8.3:64541808-64541827 | MS.gene068713:intron | 30.0% | |
| ATCTACTAATCAAATGTCAG+AGG | - | chr8.3:64541888-64541907 | MS.gene068713:CDS | 30.0% | |
| CAAATTTGATACTCCAACTT+TGG | + | chr8.3:64542613-64542632 | None:intergenic | 30.0% | |
| CACATATTACTAGCATGTTT+AGG | + | chr8.3:64544055-64544074 | None:intergenic | 30.0% | |
| CATCTTCCTAATTATAATCG+GGG | - | chr8.3:64543956-64543975 | MS.gene068713:CDS | 30.0% | |
| CTACATCTTATCTATATCGA+AGG | - | chr8.3:64543341-64543360 | MS.gene068713:intron | 30.0% | |
| CTGATAAAAAAACACACGAT+TGG | + | chr8.3:64543428-64543447 | None:intergenic | 30.0% | |
| GAAGAAATTAGGACAATGTT+TGG | + | chr8.3:64543690-64543709 | None:intergenic | 30.0% | |
| GATTGAACACTCGAATAAAT+CGG | - | chr8.3:64542223-64542242 | MS.gene068713:intron | 30.0% | |
| GCATTATAAATCGTTGAACT+TGG | + | chr8.3:64544182-64544201 | None:intergenic | 30.0% | |
| GTTGCATCAAGTATCATATT+TGG | - | chr8.3:64541803-64541822 | MS.gene068713:intron | 30.0% | |
| TAAACATCCTAATTACGGTT+GGG | - | chr8.3:64541316-64541335 | MS.gene068713:intron | 30.0% | |
| TAACACGAATGCAATATTCT+CGG | - | chr8.3:64544013-64544032 | MS.gene068713:CDS | 30.0% | |
| TAATGACCCCGATTATAATT+AGG | + | chr8.3:64543965-64543984 | None:intergenic | 30.0% | |
| TCATTAAATGTGGAGGAAAT+TGG | - | chr8.3:64543215-64543234 | MS.gene068713:intron | 30.0% | |
| TGTGCTGTAATGTTATATTG+TGG | - | chr8.3:64541638-64541657 | MS.gene068713:CDS | 30.0% | |
| TGTTCATTGAGTGTTAATAG+AGG | + | chr8.3:64542364-64542383 | None:intergenic | 30.0% | |
| TTAAAAATACCATGTGGTTG+TGG | - | chr8.3:64541279-64541298 | MS.gene068713:intron | 30.0% | |
| TTAAACATCCTAATTACGGT+TGG | - | chr8.3:64541315-64541334 | MS.gene068713:intron | 30.0% | |
| TTACAGATCACTTACTAAAG+AGG | + | chr8.3:64542396-64542415 | None:intergenic | 30.0% | |
| ! | AAAGTTTAAACAATCGGCTT+CGG | - | chr8.3:64543392-64543411 | MS.gene068713:intron | 30.0% |
| ! | CAAAGTTGGAGTATCAAATT+TGG | - | chr8.3:64542611-64542630 | MS.gene068713:intron | 30.0% |
| ! | CTAAGTGTTGTCATTAAATG+TGG | - | chr8.3:64543205-64543224 | MS.gene068713:intron | 30.0% |
| ! | GTCTTGTTAATAGCTACTTT+GGG | - | chr8.3:64540560-64540579 | MS.gene068713:CDS | 30.0% |
| ! | TATATTGTATTTAGCTCACG+GGG | - | chr8.3:64542552-64542571 | MS.gene068713:intron | 30.0% |
| ! | TTTTATGTGAATTGGGCTTT+AGG | + | chr8.3:64542471-64542490 | None:intergenic | 30.0% |
| !! | ACAACCACATGGTATTTTTA+AGG | + | chr8.3:64541280-64541299 | None:intergenic | 30.0% |
| !! | AGTCTTGTTAATAGCTACTT+TGG | - | chr8.3:64540559-64540578 | MS.gene068713:CDS | 30.0% |
| !! | CAAACTAGTGTTTTGCTATA+GGG | + | chr8.3:64543489-64543508 | None:intergenic | 30.0% |
| !! | CTTTTGTTTGTTCTTCTATC+AGG | - | chr8.3:64543562-64543581 | MS.gene068713:intron | 30.0% |
| !! | GAATTTGTTACATCATCCAT+TGG | - | chr8.3:64541863-64541882 | MS.gene068713:intron | 30.0% |
| !! | TCAAACTAGTGTTTTGCTAT+AGG | + | chr8.3:64543490-64543509 | None:intergenic | 30.0% |
| !! | TTTTCTCCTAATTTTGGGAA+TGG | + | chr8.3:64542682-64542701 | None:intergenic | 30.0% |
| !!! | CAATCGTGTGTTTTTTTATC+AGG | - | chr8.3:64543426-64543445 | MS.gene068713:intron | 30.0% |
| !!! | GATGACTTACTTTTAAGATC+AGG | + | chr8.3:64544275-64544294 | None:intergenic | 30.0% |
| !!! | GCTCTCATTTGATGATTTTT+TGG | + | chr8.3:64540606-64540625 | None:intergenic | 30.0% |
| !!! | TTTGGCATTCTTGTTTTTTC+CGG | - | chr8.3:64541732-64541751 | MS.gene068713:intron | 30.0% |
| AAAAACCTTCATACCCCATA+AGG | - | chr8.3:64542275-64542294 | MS.gene068713:intron | 35.0% | |
| AAACAGATTCAGAACTTGGA+AGG | - | chr8.3:64544137-64544156 | MS.gene068713:intron | 35.0% | |
| AACAGATTCAGAACTTGGAA+GGG | - | chr8.3:64544138-64544157 | MS.gene068713:intron | 35.0% | |
| AACTAAACCAGATGAGCAAA+TGG | + | chr8.3:64544486-64544505 | None:intergenic | 35.0% | |
| AATTAAAGAGGTCATTCTGC+TGG | + | chr8.3:64542322-64542341 | None:intergenic | 35.0% | |
| AGATGTAGACCTTAGGTAAT+TGG | + | chr8.3:64543329-64543348 | None:intergenic | 35.0% | |
| AGTGTTGTCATTAAATGTGG+AGG | - | chr8.3:64543208-64543227 | MS.gene068713:intron | 35.0% | |
| AGTTGTATAGTGTGGGAATA+TGG | - | chr8.3:64541686-64541705 | MS.gene068713:intron | 35.0% | |
| ATATCTGTTGAAGGTCCTTA+TGG | - | chr8.3:64543292-64543311 | MS.gene068713:intron | 35.0% | |
| ATGAACGCAAGCATACAAAA+AGG | + | chr8.3:64540447-64540466 | None:intergenic | 35.0% | |
| ATGTTGATATGGACCAAAGT+TGG | - | chr8.3:64542597-64542616 | MS.gene068713:intron | 35.0% | |
| CAAGAGAAGTTGTATAGTGT+GGG | - | chr8.3:64541679-64541698 | MS.gene068713:intron | 35.0% | |
| CAAGCATATCAAAGTTGCAA+TGG | - | chr8.3:64543137-64543156 | MS.gene068713:intron | 35.0% | |
| CAATATTCTCGGATCCTTTA+AGG | - | chr8.3:64544024-64544043 | MS.gene068713:CDS | 35.0% | |
| CATTGCAACTTTGATATGCT+TGG | + | chr8.3:64543139-64543158 | None:intergenic | 35.0% | |
| GAAATAAAAGGGTCAAGTGT+GGG | - | chr8.3:64544416-64544435 | MS.gene068713:CDS | 35.0% | |
| GAACCAATACATGCTATGTT+AGG | - | chr8.3:64543885-64543904 | MS.gene068713:CDS | 35.0% | |
| GATTTGATCCTACCAATTTC+TGG | - | chr8.3:64543741-64543760 | MS.gene068713:intron | 35.0% | |
| GTAGAACTCAACTTCTCTAA+GGG | - | chr8.3:64542897-64542916 | MS.gene068713:CDS | 35.0% | |
| GTGAGGCTCAATCTATAATA+AGG | - | chr8.3:64540254-64540273 | MS.gene068713:CDS | 35.0% | |
| GTGATAGAAACAATTCCAAG+TGG | + | chr8.3:64540801-64540820 | None:intergenic | 35.0% | |
| TATACCTTGTGCACCAAAAT+AGG | + | chr8.3:64540389-64540408 | None:intergenic | 35.0% | |
| TATAGTGTGGGAATATGGTT+AGG | - | chr8.3:64541691-64541710 | MS.gene068713:intron | 35.0% | |
| TCATCTGTGCTACCAATATT+TGG | - | chr8.3:64541766-64541785 | MS.gene068713:intron | 35.0% | |
| TCCTAAGGTTCTTACAATCT+AGG | - | chr8.3:64542829-64542848 | MS.gene068713:intron | 35.0% | |
| TCTTGTTGGGAACATATGTT+TGG | - | chr8.3:64541714-64541733 | MS.gene068713:intron | 35.0% | |
| TCTTTGACCATAATGCACAT+TGG | + | chr8.3:64544252-64544271 | None:intergenic | 35.0% | |
| TGAAATAAAAGGGTCAAGTG+TGG | - | chr8.3:64544415-64544434 | MS.gene068713:CDS | 35.0% | |
| TGTAGAACTCAACTTCTCTA+AGG | - | chr8.3:64542896-64542915 | MS.gene068713:CDS | 35.0% | |
| TGTTCATTGCTCTTCTTGTT+TGG | - | chr8.3:64540841-64540860 | MS.gene068713:CDS | 35.0% | |
| TTGCAACCATTCCCAAAATT+AGG | - | chr8.3:64542673-64542692 | MS.gene068713:intron | 35.0% | |
| TTTCAGGACCAAAACAAATG+AGG | - | chr8.3:64544447-64544466 | MS.gene068713:CDS | 35.0% | |
| TTTGATTAGTAGATGCCCAA+TGG | + | chr8.3:64541882-64541901 | None:intergenic | 35.0% | |
| TTTGCACAATCAGTCGTAAT+GGG | - | chr8.3:64540727-64540746 | MS.gene068713:CDS | 35.0% | |
| ! | AAGTTGAACTGACTTCCTTA+TGG | + | chr8.3:64542293-64542312 | None:intergenic | 35.0% |
| ! | AGACTGGAAAAGTGTACATA+AGG | + | chr8.3:64540544-64540563 | None:intergenic | 35.0% |
| ! | AGTTGAACTGACTTCCTTAT+GGG | + | chr8.3:64542292-64542311 | None:intergenic | 35.0% |
| ! | ATGGCAATTTTCACAACTCA+TGG | - | chr8.3:64541841-64541860 | MS.gene068713:intron | 35.0% |
| ! | TTTCAAGTGTAGCTGTCTTA+TGG | - | chr8.3:64544090-64544109 | MS.gene068713:intron | 35.0% |
| ! | TTTTGCACAATCAGTCGTAA+TGG | - | chr8.3:64540726-64540745 | MS.gene068713:CDS | 35.0% |
| !! | ATGACAACACTTAGCTTTTC+TGG | + | chr8.3:64543199-64543218 | None:intergenic | 35.0% |
| !! | CATAGCATGTATTGGTTCAT+CGG | + | chr8.3:64543883-64543902 | None:intergenic | 35.0% |
| !! | GAATATGGTTAGGTCTTGTT+GGG | - | chr8.3:64541701-64541720 | MS.gene068713:intron | 35.0% |
| AAATGGTTGCCTAAAATCCG+TGG | - | chr8.3:64540349-64540368 | MS.gene068713:CDS | 40.0% | |
| AACCGTCCAATGCTTGTAAA+AGG | - | chr8.3:64540774-64540793 | MS.gene068713:CDS | 40.0% | |
| AAGAGTTAATCCGCTTGAGT+TGG | - | chr8.3:64542060-64542079 | MS.gene068713:CDS | 40.0% | |
| ACCAAGAAGAGGTAGAAACT+AGG | + | chr8.3:64542801-64542820 | None:intergenic | 40.0% | |
| AGAAACATGGGACAACCATA+TGG | - | chr8.3:64540751-64540770 | MS.gene068713:CDS | 40.0% | |
| AGCGAAACAGATTCAGAACT+TGG | - | chr8.3:64544133-64544152 | MS.gene068713:intron | 40.0% | |
| ATATCGCTGCTAAGTGTTTG+AGG | + | chr8.3:64540953-64540972 | None:intergenic | 40.0% | |
| ATATTTGGCCTCACTTCTGA+AGG | - | chr8.3:64541781-64541800 | MS.gene068713:intron | 40.0% | |
| ATGCTTGTAAAAGGACCACT+TGG | - | chr8.3:64540783-64540802 | MS.gene068713:CDS | 40.0% | |
| ATGTCACATGTGCCAGAAAT+TGG | + | chr8.3:64543756-64543775 | None:intergenic | 40.0% | |
| ATGTTTAGGAACGCCCTTAA+AGG | + | chr8.3:64544041-64544060 | None:intergenic | 40.0% | |
| CAATTCATCCCCAAACTCTA+TGG | - | chr8.3:64543841-64543860 | MS.gene068713:intron | 40.0% | |
| CATAGAGTTTGGGGATGAAT+TGG | + | chr8.3:64543843-64543862 | None:intergenic | 40.0% | |
| CATCATCAAACCAACTCAAG+CGG | + | chr8.3:64542073-64542092 | None:intergenic | 40.0% | |
| CATTCGTGTTATGATCGATC+GGG | + | chr8.3:64544004-64544023 | None:intergenic | 40.0% | |
| CCAAGAAGAGGTAGAAACTA+GGG | + | chr8.3:64542800-64542819 | None:intergenic | 40.0% | |
| CTATGTTAGGTCCAAACACT+TGG | - | chr8.3:64543898-64543917 | MS.gene068713:CDS | 40.0% | |
| CTGCTTCAACCAATTACCTA+AGG | - | chr8.3:64543317-64543336 | MS.gene068713:intron | 40.0% | |
| CTTAGGTAATTGGTTGAAGC+AGG | + | chr8.3:64543319-64543338 | None:intergenic | 40.0% | |
| CTTTCAAATCCTTCGCCTAT+CGG | - | chr8.3:64543259-64543278 | MS.gene068713:intron | 40.0% | |
| GACCTTCAACAGATATTCCA+AGG | + | chr8.3:64543288-64543307 | None:intergenic | 40.0% | |
| GACTCCCAACATGTCTATTT+CGG | - | chr8.3:64542138-64542157 | MS.gene068713:CDS | 40.0% | |
| GCAAGAGAAGTTGTATAGTG+TGG | - | chr8.3:64541678-64541697 | MS.gene068713:intron | 40.0% | |
| GCATTCGTGTTATGATCGAT+CGG | + | chr8.3:64544005-64544024 | None:intergenic | 40.0% | |
| GCCTAGATTGTAAGAACCTT+AGG | + | chr8.3:64542833-64542852 | None:intergenic | 40.0% | |
| GGACCTAACATAGCATGTAT+TGG | + | chr8.3:64543891-64543910 | None:intergenic | 40.0% | |
| GTGGTTGTGGTACCTATTAA+AGG | - | chr8.3:64541292-64541311 | MS.gene068713:intron | 40.0% | |
| GTGTGATGTATGCCTCAATT+TGG | + | chr8.3:64543794-64543813 | None:intergenic | 40.0% | |
| TAATAGGTACCACAACCACA+TGG | + | chr8.3:64541291-64541310 | None:intergenic | 40.0% | |
| TATCGCTGCTAAGTGTTTGA+GGG | + | chr8.3:64540952-64540971 | None:intergenic | 40.0% | |
| TCAAAAATAGCGGCAGAGTA+CGG | - | chr8.3:64540903-64540922 | MS.gene068713:CDS | 40.0% | |
| TCAGAAGTGAGGCCAAATAT+TGG | + | chr8.3:64541781-64541800 | None:intergenic | 40.0% | |
| TCCACCGAAATAGACATGTT+GGG | + | chr8.3:64542145-64542164 | None:intergenic | 40.0% | |
| TCTTGGTTGATCGTTTCCTA+AGG | - | chr8.3:64542814-64542833 | MS.gene068713:intron | 40.0% | |
| TGGCTTAAGCCATAGAGTTT+GGG | + | chr8.3:64543853-64543872 | None:intergenic | 40.0% | |
| TTGAGTTCTACACCTTCACA+AGG | + | chr8.3:64542888-64542907 | None:intergenic | 40.0% | |
| TTGCAAACCCAACCGTAATT+AGG | + | chr8.3:64541326-64541345 | None:intergenic | 40.0% | |
| TTGGCTTAAGCCATAGAGTT+TGG | + | chr8.3:64543854-64543873 | None:intergenic | 40.0% | |
| ! | AAGGCTGATCCTACCTATTT+TGG | - | chr8.3:64540373-64540392 | MS.gene068713:intron | 40.0% |
| ! | ACTTCCTGCCTCATTTGTTT+TGG | + | chr8.3:64544458-64544477 | None:intergenic | 40.0% |
| ! | AGTCGTAATGGGAAGAAACA+TGG | - | chr8.3:64540738-64540757 | MS.gene068713:CDS | 40.0% |
| ! | AGTGGTCCTTTTACAAGCAT+TGG | + | chr8.3:64540783-64540802 | None:intergenic | 40.0% |
| ! | ATTGGTTCATCGGATGGATT+TGG | + | chr8.3:64543873-64543892 | None:intergenic | 40.0% |
| ! | GGAATATGGTTAGGTCTTGT+TGG | - | chr8.3:64541700-64541719 | MS.gene068713:intron | 40.0% |
| ! | GTCGTAATGGGAAGAAACAT+GGG | - | chr8.3:64540739-64540758 | MS.gene068713:CDS | 40.0% |
| ! | GTTGAACTGACTTCCTTATG+GGG | + | chr8.3:64542291-64542310 | None:intergenic | 40.0% |
| ! | GTTGGAGTATCAAATTTGGC+TGG | - | chr8.3:64542615-64542634 | MS.gene068713:intron | 40.0% |
| ! | TCTCGTATTTTGCCTTGTGA+AGG | - | chr8.3:64542873-64542892 | MS.gene068713:intron | 40.0% |
| !! | ATTGGGCTTTAGGCTAAGTA+AGG | + | chr8.3:64542461-64542480 | None:intergenic | 40.0% |
| !!! | GTCCTTTTACAAGCATTGGA+CGG | + | chr8.3:64540779-64540798 | None:intergenic | 40.0% |
| ACATGTCTATTTCGGTGGAC+TGG | - | chr8.3:64542146-64542165 | MS.gene068713:CDS | 45.0% | |
| AGGACCAAAACAAATGAGGC+AGG | - | chr8.3:64544451-64544470 | MS.gene068713:CDS | 45.0% | |
| AGGTTCTTACAATCTAGGCG+CGG | - | chr8.3:64542834-64542853 | MS.gene068713:intron | 45.0% | |
| CAACAAGGGACTGATATGGA+AGG | + | chr8.3:64544223-64544242 | None:intergenic | 45.0% | |
| CACATGTGCCAGAAATTGGT+AGG | + | chr8.3:64543752-64543771 | None:intergenic | 45.0% | |
| CCCTAGTTTCTACCTCTTCT+TGG | - | chr8.3:64542797-64542816 | MS.gene068713:intron | 45.0% | |
| CCTTGTGCACCAAAATAGGT+AGG | + | chr8.3:64540385-64540404 | None:intergenic | 45.0% | |
| CGCCTTGGAATATCTGTTGA+AGG | - | chr8.3:64543283-64543302 | MS.gene068713:intron | 45.0% | |
| GACTTCCTTATGGGGTATGA+AGG | + | chr8.3:64542283-64542302 | None:intergenic | 45.0% | |
| GCGAAGGATTTGAAAGCAAC+TGG | + | chr8.3:64543255-64543274 | None:intergenic | 45.0% | |
| GCTTCAACAAGGGACTGATA+TGG | + | chr8.3:64544227-64544246 | None:intergenic | 45.0% | |
| GGAAACGATCAACCAAGAAG+AGG | + | chr8.3:64542812-64542831 | None:intergenic | 45.0% | |
| GGAGAGATATCTTTGCTTGC+TGG | - | chr8.3:64542636-64542655 | MS.gene068713:intron | 45.0% | |
| GGCTTAAGCCATAGAGTTTG+GGG | + | chr8.3:64543852-64543871 | None:intergenic | 45.0% | |
| GTCCACCGAAATAGACATGT+TGG | + | chr8.3:64542146-64542165 | None:intergenic | 45.0% | |
| GTTGCATCCATTTGCTCATC+TGG | - | chr8.3:64544476-64544495 | MS.gene068713:CDS | 45.0% | |
| TAGGTCCAAACACTTGGCTT+TGG | - | chr8.3:64543904-64543923 | MS.gene068713:CDS | 45.0% | |
| TCCCAACATGTCTATTTCGG+TGG | - | chr8.3:64542141-64542160 | MS.gene068713:CDS | 45.0% | |
| TGATGCAACCTTCAGAAGTG+AGG | + | chr8.3:64541792-64541811 | None:intergenic | 45.0% | |
| TTAAATGAGACCCCCACAAG+TGG | - | chr8.3:64542193-64542212 | MS.gene068713:intron | 45.0% | |
| TTGGTTGAAGCAGGTCCATA+AGG | + | chr8.3:64543310-64543329 | None:intergenic | 45.0% | |
| ! | AGGGAGCATAGTGAAGGAAA+AGG | + | chr8.3:64542781-64542800 | None:intergenic | 45.0% |
| ! | AGTGTGGGAGTTCTTGTTTC+AGG | - | chr8.3:64544431-64544450 | MS.gene068713:CDS | 45.0% |
| ! | CTCAACTTCTCTAAGGGACA+TGG | - | chr8.3:64542903-64542922 | MS.gene068713:CDS | 45.0% |
| ! | GAAACTAGGGAGCATAGTGA+AGG | + | chr8.3:64542787-64542806 | None:intergenic | 45.0% |
| ! | GTTGAACTTGGTGAGACTGT+TGG | + | chr8.3:64544170-64544189 | None:intergenic | 45.0% |
| ! | TGGGGATGAATTGGAGTATC+TGG | + | chr8.3:64543834-64543853 | None:intergenic | 45.0% |
| !! | AAGCATTGGACGGTTCCATA+TGG | + | chr8.3:64540769-64540788 | None:intergenic | 45.0% |
| !! | ATTGGTGGTGCTGTTGTTTC+TGG | - | chr8.3:64540279-64540298 | MS.gene068713:CDS | 45.0% |
| !! | GCATGTATTGGTTCATCGGA+TGG | + | chr8.3:64543879-64543898 | None:intergenic | 45.0% |
| !! | GCTTGCTGGTTTGTTCTTGT+GGG | - | chr8.3:64542650-64542669 | MS.gene068713:intron | 45.0% |
| !! | TGCTTGCTGGTTTGTTCTTG+TGG | - | chr8.3:64542649-64542668 | MS.gene068713:intron | 45.0% |
| !! | TTGGTGGTGCTGTTGTTTCT+GGG | - | chr8.3:64540280-64540299 | MS.gene068713:CDS | 45.0% |
| !!! | CCTACCTATTTTGGTGCACA+AGG | - | chr8.3:64540382-64540401 | MS.gene068713:intron | 45.0% |
| !!! | TTGTTTTTTCCGGTGACACG+TGG | - | chr8.3:64541742-64541761 | MS.gene068713:intron | 45.0% |
| AATCTCACCGACCACTTGTG+GGG | + | chr8.3:64542207-64542226 | None:intergenic | 50.0% | |
| ACAGATGATCCACGTGTCAC+CGG | + | chr8.3:64541754-64541773 | None:intergenic | 50.0% | |
| CAATCTCACCGACCACTTGT+GGG | + | chr8.3:64542208-64542227 | None:intergenic | 50.0% | |
| CAGGCATGACACACTTGTGA+TGG | - | chr8.3:64543581-64543600 | MS.gene068713:intron | 50.0% | |
| CCAAGCCAAAGCCAAGTGTT+TGG | + | chr8.3:64543912-64543931 | None:intergenic | 50.0% | |
| GATATTCCAAGGCGACCGAT+AGG | + | chr8.3:64543277-64543296 | None:intergenic | 50.0% | |
| GTAAGTAGGGATCATCGCCT+TGG | + | chr8.3:64541941-64541960 | None:intergenic | 50.0% | |
| GTTGCCTAAAATCCGTGGCA+AGG | - | chr8.3:64540354-64540373 | MS.gene068713:CDS | 50.0% | |
| TCAATCTCACCGACCACTTG+TGG | + | chr8.3:64542209-64542228 | None:intergenic | 50.0% | |
| ! | ACACTTGTGATGGTGAGTGG+AGG | - | chr8.3:64543591-64543610 | MS.gene068713:intron | 50.0% |
| ! | GACACACTTGTGATGGTGAG+TGG | - | chr8.3:64543588-64543607 | MS.gene068713:intron | 50.0% |
| ! | TCAGCCTTGCCACGGATTTT+AGG | + | chr8.3:64540361-64540380 | None:intergenic | 50.0% |
| !! | CCAAACACTTGGCTTTGGCT+TGG | - | chr8.3:64543909-64543928 | MS.gene068713:CDS | 50.0% |
| !! | TTGGCTTGGACACATGCTCA+TGG | - | chr8.3:64541822-64541841 | MS.gene068713:intron | 50.0% |
| AGAGGTCATTCTGCTGGCAG+CGG | + | chr8.3:64542316-64542335 | None:intergenic | 55.0% | |
| AGGTAGGATCAGCCTTGCCA+CGG | + | chr8.3:64540369-64540388 | None:intergenic | 55.0% | |
| ATCTAGGCGCGGTGTTCGTT+TGG | - | chr8.3:64542845-64542864 | MS.gene068713:intron | 55.0% | |
| ATCTCACCGACCACTTGTGG+GGG | + | chr8.3:64542206-64542225 | None:intergenic | 55.0% | |
| ATGAGACCCCCACAAGTGGT+CGG | - | chr8.3:64542197-64542216 | MS.gene068713:intron | 55.0% | |
| ! | GTGATGGTGAGTGGAGGAAG+TGG | - | chr8.3:64543597-64543616 | MS.gene068713:intron | 55.0% |
| CCAAGGCGACCGATAGGCGA+AGG | + | chr8.3:64543271-64543290 | None:intergenic | 65.0% | |
| CCTTCGCCTATCGGTCGCCT+TGG | - | chr8.3:64543268-64543287 | MS.gene068713:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 64540247 | 64544544 | 64540247 | ID=MS.gene068713 |
| chr8.3 | mRNA | 64540247 | 64544544 | 64540247 | ID=MS.gene068713.t1;Parent=MS.gene068713 |
| chr8.3 | exon | 64544388 | 64544544 | 64544388 | ID=MS.gene068713.t1.exon1;Parent=MS.gene068713.t1 |
| chr8.3 | CDS | 64544388 | 64544544 | 64544388 | ID=cds.MS.gene068713.t1;Parent=MS.gene068713.t1 |
| chr8.3 | exon | 64544155 | 64544260 | 64544155 | ID=MS.gene068713.t1.exon2;Parent=MS.gene068713.t1 |
| chr8.3 | CDS | 64544155 | 64544260 | 64544155 | ID=cds.MS.gene068713.t1;Parent=MS.gene068713.t1 |
| chr8.3 | exon | 64543857 | 64544051 | 64543857 | ID=MS.gene068713.t1.exon3;Parent=MS.gene068713.t1 |
| chr8.3 | CDS | 64543857 | 64544051 | 64543857 | ID=cds.MS.gene068713.t1;Parent=MS.gene068713.t1 |
| chr8.3 | exon | 64542882 | 64543116 | 64542882 | ID=MS.gene068713.t1.exon4;Parent=MS.gene068713.t1 |
| chr8.3 | CDS | 64542882 | 64543116 | 64542882 | ID=cds.MS.gene068713.t1;Parent=MS.gene068713.t1 |
| chr8.3 | exon | 64541867 | 64542194 | 64541867 | ID=MS.gene068713.t1.exon5;Parent=MS.gene068713.t1 |
| chr8.3 | CDS | 64541867 | 64542194 | 64541867 | ID=cds.MS.gene068713.t1;Parent=MS.gene068713.t1 |
| chr8.3 | exon | 64541453 | 64541696 | 64541453 | ID=MS.gene068713.t1.exon6;Parent=MS.gene068713.t1 |
| chr8.3 | CDS | 64541453 | 64541696 | 64541453 | ID=cds.MS.gene068713.t1;Parent=MS.gene068713.t1 |
| chr8.3 | exon | 64540507 | 64541207 | 64540507 | ID=MS.gene068713.t1.exon7;Parent=MS.gene068713.t1 |
| chr8.3 | CDS | 64540507 | 64541207 | 64540507 | ID=cds.MS.gene068713.t1;Parent=MS.gene068713.t1 |
| chr8.3 | exon | 64540247 | 64540386 | 64540247 | ID=MS.gene068713.t1.exon8;Parent=MS.gene068713.t1 |
| chr8.3 | CDS | 64540247 | 64540386 | 64540247 | ID=cds.MS.gene068713.t1;Parent=MS.gene068713.t1 |
| Gene Sequence |
| Protein sequence |
