Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059892.t1 | XP_013464772.1 | 96.9 | 131 | 4 | 0 | 1 | 131 | 211 | 341 | 5.40E-67 | 263.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059892.t1 | A0A072VAI7 | 96.9 | 131 | 4 | 0 | 1 | 131 | 211 | 341 | 3.9e-67 | 263.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050720 | MS.gene059892 | 0.804482 | 2.12E-49 | -1.69E-46 |
MS.gene051158 | MS.gene059892 | 0.825116 | 5.58E-54 | -1.69E-46 |
MS.gene051552 | MS.gene059892 | 0.806697 | 7.25E-50 | -1.69E-46 |
MS.gene051973 | MS.gene059892 | 0.808872 | 2.50E-50 | -1.69E-46 |
MS.gene051996 | MS.gene059892 | 0.820094 | 8.23E-53 | -1.69E-46 |
MS.gene052223 | MS.gene059892 | 0.804211 | 2.41E-49 | -1.69E-46 |
MS.gene053406 | MS.gene059892 | 0.814524 | 1.47E-51 | -1.69E-46 |
MS.gene054742 | MS.gene059892 | 0.808624 | 2.83E-50 | -1.69E-46 |
MS.gene056680 | MS.gene059892 | 0.838262 | 3.19E-57 | -1.69E-46 |
MS.gene056748 | MS.gene059892 | 0.80441 | 2.19E-49 | -1.69E-46 |
MS.gene056920 | MS.gene059892 | 0.807985 | 3.87E-50 | -1.69E-46 |
MS.gene056988 | MS.gene059892 | 0.808748 | 2.66E-50 | -1.69E-46 |
MS.gene058418 | MS.gene059892 | 0.80288 | 4.55E-49 | -1.69E-46 |
MS.gene059891 | MS.gene059892 | 0.906832 | 9.73E-81 | -1.69E-46 |
MS.gene059892 | MS.gene060087 | 0.833039 | 6.70E-56 | -1.69E-46 |
MS.gene059892 | MS.gene063912 | 0.834954 | 2.22E-56 | -1.69E-46 |
MS.gene059892 | MS.gene064493 | 0.813605 | 2.35E-51 | -1.69E-46 |
MS.gene059892 | MS.gene064807 | 0.811208 | 7.85E-51 | -1.69E-46 |
MS.gene059892 | MS.gene065466 | 0.80831 | 3.30E-50 | -1.69E-46 |
MS.gene059892 | MS.gene065728 | 0.801775 | 7.68E-49 | -1.69E-46 |
MS.gene059892 | MS.gene065842 | 0.807964 | 3.91E-50 | -1.69E-46 |
MS.gene059892 | MS.gene06593 | 0.80154 | 8.58E-49 | -1.69E-46 |
MS.gene059892 | MS.gene066500 | 0.810434 | 1.16E-50 | -1.69E-46 |
MS.gene059892 | MS.gene066602 | 0.837031 | 6.61E-57 | -1.69E-46 |
MS.gene059892 | MS.gene066937 | 0.837723 | 4.39E-57 | -1.69E-46 |
MS.gene059892 | MS.gene06756 | 0.853718 | 1.99E-61 | -1.69E-46 |
MS.gene059892 | MS.gene06805 | 0.801495 | 8.76E-49 | -1.69E-46 |
MS.gene059892 | MS.gene068713 | 0.8006 | 1.34E-48 | -1.69E-46 |
MS.gene059892 | MS.gene072418 | 0.80291 | 4.48E-49 | -1.69E-46 |
MS.gene059892 | MS.gene072628 | 0.805134 | 1.55E-49 | -1.69E-46 |
MS.gene059892 | MS.gene073870 | 0.803454 | 3.46E-49 | -1.69E-46 |
MS.gene059892 | MS.gene074299 | 0.802203 | 6.27E-49 | -1.69E-46 |
MS.gene059892 | MS.gene074595 | 0.807089 | 5.99E-50 | -1.69E-46 |
MS.gene059892 | MS.gene07905 | 0.823421 | 1.40E-53 | -1.69E-46 |
MS.gene059892 | MS.gene08883 | 0.816071 | 6.68E-52 | -1.69E-46 |
MS.gene059892 | MS.gene09920 | 0.822424 | 2.39E-53 | -1.69E-46 |
MS.gene059892 | MS.gene20639 | 0.816463 | 5.46E-52 | -1.69E-46 |
MS.gene059892 | MS.gene23026 | 0.812916 | 3.33E-51 | -1.69E-46 |
MS.gene059892 | MS.gene23507 | 0.804519 | 2.08E-49 | -1.69E-46 |
MS.gene059892 | MS.gene23869 | 0.813672 | 2.27E-51 | -1.69E-46 |
MS.gene059892 | MS.gene23957 | 0.806544 | 7.81E-50 | -1.69E-46 |
MS.gene059892 | MS.gene24583 | 0.805838 | 1.10E-49 | -1.69E-46 |
MS.gene059892 | MS.gene24585 | 0.812951 | 3.27E-51 | -1.69E-46 |
MS.gene059892 | MS.gene24862 | 0.815727 | 7.97E-52 | -1.69E-46 |
MS.gene059892 | MS.gene25652 | 0.831337 | 1.77E-55 | -1.69E-46 |
MS.gene059892 | MS.gene26294 | 0.809938 | 1.48E-50 | -1.69E-46 |
MS.gene059892 | MS.gene28395 | 0.834757 | 2.49E-56 | -1.69E-46 |
MS.gene059892 | MS.gene28548 | 0.847691 | 9.85E-60 | -1.69E-46 |
MS.gene059892 | MS.gene28619 | 0.821119 | 4.78E-53 | -1.69E-46 |
MS.gene059892 | MS.gene30382 | 0.816881 | 4.40E-52 | -1.69E-46 |
MS.gene059892 | MS.gene30666 | 0.808618 | 2.83E-50 | -1.69E-46 |
MS.gene059892 | MS.gene35433 | 0.80553 | 1.28E-49 | -1.69E-46 |
MS.gene059892 | MS.gene35464 | 0.81996 | 8.83E-53 | -1.69E-46 |
MS.gene059892 | MS.gene35741 | 0.817541 | 3.13E-52 | -1.69E-46 |
MS.gene059892 | MS.gene35951 | 0.816015 | 6.87E-52 | -1.69E-46 |
MS.gene059892 | MS.gene36326 | 0.821266 | 4.42E-53 | -1.69E-46 |
MS.gene059892 | MS.gene36354 | 0.801363 | 9.33E-49 | -1.69E-46 |
MS.gene059892 | MS.gene40173 | 0.842561 | 2.40E-58 | -1.69E-46 |
MS.gene059892 | MS.gene42096 | 0.801838 | 7.45E-49 | -1.69E-46 |
MS.gene059892 | MS.gene43874 | 0.805808 | 1.12E-49 | -1.69E-46 |
MS.gene059892 | MS.gene44351 | 0.801541 | 8.58E-49 | -1.69E-46 |
MS.gene059892 | MS.gene44712 | 0.811647 | 6.31E-51 | -1.69E-46 |
MS.gene059892 | MS.gene44958 | 0.838518 | 2.74E-57 | -1.69E-46 |
MS.gene059892 | MS.gene45038 | 0.811629 | 6.36E-51 | -1.69E-46 |
MS.gene059892 | MS.gene45706 | 0.800441 | 1.44E-48 | -1.69E-46 |
MS.gene059892 | MS.gene48169 | 0.840842 | 6.82E-58 | -1.69E-46 |
MS.gene059892 | MS.gene48807 | 0.809849 | 1.54E-50 | -1.69E-46 |
MS.gene059892 | MS.gene48885 | 0.838491 | 2.79E-57 | -1.69E-46 |
MS.gene059892 | MS.gene50055 | 0.80506 | 1.60E-49 | -1.69E-46 |
MS.gene059892 | MS.gene50057 | 0.821953 | 3.07E-53 | -1.69E-46 |
MS.gene059892 | MS.gene50279 | 0.810797 | 9.64E-51 | -1.69E-46 |
MS.gene059892 | MS.gene52797 | 0.819155 | 1.35E-52 | -1.69E-46 |
MS.gene059892 | MS.gene54029 | 0.819327 | 1.23E-52 | -1.69E-46 |
MS.gene059892 | MS.gene54611 | 0.803684 | 3.10E-49 | -1.69E-46 |
MS.gene059892 | MS.gene54667 | 0.804242 | 2.37E-49 | -1.69E-46 |
MS.gene059892 | MS.gene55964 | 0.816835 | 4.51E-52 | -1.69E-46 |
MS.gene059892 | MS.gene56381 | 0.803377 | 3.59E-49 | -1.69E-46 |
MS.gene059892 | MS.gene57085 | 0.808063 | 3.72E-50 | -1.69E-46 |
MS.gene059892 | MS.gene57737 | 0.813362 | 2.66E-51 | -1.69E-46 |
MS.gene059892 | MS.gene58740 | 0.804676 | 1.93E-49 | -1.69E-46 |
MS.gene059892 | MS.gene58786 | 0.809606 | 1.74E-50 | -1.69E-46 |
MS.gene059892 | MS.gene59920 | 0.816136 | 6.46E-52 | -1.69E-46 |
MS.gene059892 | MS.gene60913 | 0.827179 | 1.80E-54 | -1.69E-46 |
MS.gene059892 | MS.gene63913 | 0.80587 | 1.08E-49 | -1.69E-46 |
MS.gene059892 | MS.gene65040 | 0.801287 | 9.67E-49 | -1.69E-46 |
MS.gene059892 | MS.gene65951 | 0.82651 | 2.61E-54 | -1.69E-46 |
MS.gene059892 | MS.gene67371 | 0.802669 | 5.03E-49 | -1.69E-46 |
MS.gene059892 | MS.gene67377 | 0.803675 | 3.11E-49 | -1.69E-46 |
MS.gene059892 | MS.gene67711 | 0.804535 | 2.06E-49 | -1.69E-46 |
MS.gene059892 | MS.gene69863 | 0.806331 | 8.67E-50 | -1.69E-46 |
MS.gene059892 | MS.gene69966 | 0.803015 | 4.26E-49 | -1.69E-46 |
MS.gene059892 | MS.gene70226 | 0.805758 | 1.14E-49 | -1.69E-46 |
MS.gene059892 | MS.gene72940 | 0.809999 | 1.43E-50 | -1.69E-46 |
MS.gene059892 | MS.gene73510 | 0.808741 | 2.67E-50 | -1.69E-46 |
MS.gene059892 | MS.gene73512 | 0.813992 | 1.93E-51 | -1.69E-46 |
MS.gene059892 | MS.gene73993 | 0.818082 | 2.36E-52 | -1.69E-46 |
MS.gene059892 | MS.gene73995 | 0.851436 | 8.88E-61 | -1.69E-46 |
MS.gene059892 | MS.gene74384 | 0.816814 | 4.55E-52 | -1.69E-46 |
MS.gene059892 | MS.gene75460 | 0.802803 | 4.72E-49 | -1.69E-46 |
MS.gene059892 | MS.gene76444 | 0.807906 | 4.02E-50 | -1.69E-46 |
MS.gene059892 | MS.gene76737 | 0.826174 | 3.14E-54 | -1.69E-46 |
MS.gene059892 | MS.gene77325 | 0.821643 | 3.62E-53 | -1.69E-46 |
MS.gene059892 | MS.gene78125 | 0.805302 | 1.43E-49 | -1.69E-46 |
MS.gene059892 | MS.gene78663 | 0.840375 | 9.03E-58 | -1.69E-46 |
MS.gene059892 | MS.gene79232 | 0.806944 | 6.43E-50 | -1.69E-46 |
MS.gene059892 | MS.gene80293 | 0.823354 | 1.45E-53 | -1.69E-46 |
MS.gene059892 | MS.gene80665 | 0.808201 | 3.48E-50 | -1.69E-46 |
MS.gene059892 | MS.gene80744 | 0.813085 | 3.06E-51 | -1.69E-46 |
MS.gene059892 | MS.gene81349 | 0.809566 | 1.78E-50 | -1.69E-46 |
MS.gene059892 | MS.gene81350 | 0.801797 | 7.60E-49 | -1.69E-46 |
MS.gene059892 | MS.gene81770 | 0.803246 | 3.82E-49 | -1.69E-46 |
MS.gene059892 | MS.gene82244 | 0.815562 | 8.67E-52 | -1.69E-46 |
MS.gene059892 | MS.gene82778 | 0.808013 | 3.81E-50 | -1.69E-46 |
MS.gene059892 | MS.gene84143 | 0.842511 | 2.47E-58 | -1.69E-46 |
MS.gene059892 | MS.gene84222 | 0.818807 | 1.62E-52 | -1.69E-46 |
MS.gene059892 | MS.gene85260 | 0.801959 | 7.04E-49 | -1.69E-46 |
MS.gene059892 | MS.gene85750 | 0.833497 | 5.16E-56 | -1.69E-46 |
MS.gene059892 | MS.gene86387 | 0.809913 | 1.50E-50 | -1.69E-46 |
MS.gene059892 | MS.gene87056 | 0.825008 | 5.92E-54 | -1.69E-46 |
MS.gene059892 | MS.gene87346 | 0.837144 | 6.18E-57 | -1.69E-46 |
MS.gene059892 | MS.gene87750 | 0.801162 | 1.03E-48 | -1.69E-46 |
MS.gene059892 | MS.gene88365 | 0.90336 | 3.76E-79 | -1.69E-46 |
MS.gene059892 | MS.gene88366 | 0.862203 | 5.98E-64 | -1.69E-46 |
MS.gene059892 | MS.gene88597 | 0.812254 | 4.65E-51 | -1.69E-46 |
MS.gene059892 | MS.gene89031 | 0.829951 | 3.86E-55 | -1.69E-46 |
MS.gene059892 | MS.gene90407 | 0.80937 | 1.96E-50 | -1.69E-46 |
MS.gene059892 | MS.gene90814 | 0.816534 | 5.26E-52 | -1.69E-46 |
MS.gene059892 | MS.gene91226 | 0.808714 | 2.70E-50 | -1.69E-46 |
MS.gene059892 | MS.gene96749 | 0.817317 | 3.51E-52 | -1.69E-46 |
MS.gene059892 | MS.gene97024 | 0.831317 | 1.79E-55 | -1.69E-46 |
MS.gene059892 | MS.gene97335 | 0.804027 | 2.63E-49 | -1.69E-46 |
MS.gene059892 | MS.gene97550 | 0.806155 | 9.44E-50 | -1.69E-46 |
MS.gene059892 | MS.gene98272 | 0.8085 | 3.00E-50 | -1.69E-46 |
MS.gene059892 | MS.gene98466 | 0.81327 | 2.79E-51 | -1.69E-46 |
MS.gene059892 | MS.gene98470 | 0.824062 | 9.89E-54 | -1.69E-46 |
MS.gene059892 | MS.gene98480 | 0.801115 | 1.05E-48 | -1.69E-46 |
MS.gene059892 | MS.gene99062 | 0.808626 | 2.82E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059892.t1 | MTR_2g080260 | 96.947 | 131 | 4 | 0 | 1 | 131 | 211 | 341 | 1.17e-90 | 266 |
MS.gene059892.t1 | MTR_2g080230 | 93.893 | 131 | 8 | 0 | 1 | 131 | 211 | 341 | 1.30e-87 | 258 |
MS.gene059892.t1 | MTR_8g464300 | 78.862 | 123 | 26 | 0 | 9 | 131 | 219 | 341 | 1.16e-66 | 205 |
MS.gene059892.t1 | MTR_2g021580 | 45.802 | 131 | 57 | 3 | 9 | 131 | 207 | 331 | 1.78e-31 | 114 |
MS.gene059892.t1 | MTR_4g059670 | 46.847 | 111 | 57 | 1 | 2 | 112 | 287 | 395 | 2.73e-31 | 115 |
MS.gene059892.t1 | MTR_2g030835 | 45.038 | 131 | 58 | 3 | 9 | 131 | 206 | 330 | 6.08e-31 | 112 |
MS.gene059892.t1 | MTR_4g059630 | 45.946 | 111 | 58 | 1 | 2 | 112 | 278 | 386 | 6.37e-31 | 114 |
MS.gene059892.t1 | MTR_2g030825 | 46.032 | 126 | 64 | 2 | 9 | 131 | 471 | 595 | 3.09e-30 | 114 |
MS.gene059892.t1 | MTR_2g030845 | 46.032 | 126 | 64 | 2 | 9 | 131 | 472 | 596 | 2.06e-29 | 111 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059892.t1 | AT5G54370 | 67.164 | 134 | 39 | 2 | 1 | 131 | 206 | 337 | 1.66e-61 | 192 |
MS.gene059892.t1 | AT1G54890 | 63.158 | 133 | 47 | 1 | 1 | 131 | 215 | 347 | 2.19e-55 | 176 |
MS.gene059892.t1 | AT4G27400 | 62.963 | 135 | 44 | 2 | 1 | 131 | 209 | 341 | 1.71e-54 | 174 |
MS.gene059892.t1 | AT5G60530 | 52.427 | 103 | 49 | 0 | 2 | 104 | 333 | 435 | 1.05e-33 | 122 |
MS.gene059892.t1 | AT5G60520 | 54.167 | 96 | 44 | 0 | 2 | 97 | 232 | 327 | 1.50e-32 | 117 |
MS.gene059892.t1 | AT3G19430 | 44.615 | 130 | 71 | 1 | 2 | 131 | 454 | 582 | 1.31e-30 | 114 |
MS.gene059892.t1 | AT3G19430 | 44.615 | 130 | 71 | 1 | 2 | 131 | 431 | 559 | 1.56e-30 | 114 |
Find 34 sgRNAs with CRISPR-Local
Find 37 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAGATATTTCAGCAACTTC+TGG | 0.256973 | 2.2:-15124479 | None:intergenic |
ATTGCCACGCCTGGCTTTGC+CGG | 0.261338 | 2.2:-15124662 | None:intergenic |
CATCAGGAATCTGATAATTA+TGG | 0.264771 | 2.2:-15124538 | None:intergenic |
TCCAAGAACTCCTTCAACTT+TGG | 0.319801 | 2.2:-15124612 | None:intergenic |
GATGTGCAGTTCAAATTCTA+TGG | 0.321248 | 2.2:+15124581 | MS.gene059892:CDS |
TCCAAAGTTGAAGGAGTTCT+TGG | 0.337116 | 2.2:+15124611 | MS.gene059892:CDS |
CAGATATTTCAGCAACTTCT+GGG | 0.400574 | 2.2:-15124478 | None:intergenic |
GAAGGCATGGATATTGAGTA+TGG | 0.445718 | 2.2:+15124782 | MS.gene059892:CDS |
ACTACTGGCATTGCCACGCC+TGG | 0.455683 | 2.2:-15124671 | None:intergenic |
ATGGATTCTACTGTCCTCCT+TGG | 0.475359 | 2.2:-15124519 | None:intergenic |
TTGTCTTCCCCTCCAACTAC+TGG | 0.482550 | 2.2:-15124686 | None:intergenic |
TGAGCAAAACAATCATCATC+AGG | 0.483129 | 2.2:-15124554 | None:intergenic |
GGCGTGGCAATGCCAGTAGT+TGG | 0.486470 | 2.2:+15124674 | MS.gene059892:CDS |
TTTCAAAATCCGGCAAAGCC+AGG | 0.488564 | 2.2:+15124653 | MS.gene059892:CDS |
CTACTGTCCTCCTTGGTGAC+AGG | 0.494181 | 2.2:-15124512 | None:intergenic |
GGATATTGAGTATGGTATGA+TGG | 0.518205 | 2.2:+15124790 | MS.gene059892:CDS |
AGATTCAGTGCAGGAAGGCA+TGG | 0.525207 | 2.2:+15124769 | MS.gene059892:CDS |
ATCTGAAGATGCAAGGGATG+TGG | 0.533450 | 2.2:-15124717 | None:intergenic |
GGTGGTGCTAGCAGTGGTAA+TGG | 0.538430 | 2.2:+15124821 | MS.gene059892:CDS |
GGTTTATCGTCCAAAGTTGA+AGG | 0.540641 | 2.2:+15124602 | MS.gene059892:CDS |
TTCTGCTAAAGATTCAGTGC+AGG | 0.549391 | 2.2:+15124760 | MS.gene059892:CDS |
GTGGCAATGCCAGTAGTTGG+AGG | 0.551168 | 2.2:+15124677 | MS.gene059892:CDS |
CAAGACAATCTGAAGATGCA+AGG | 0.565565 | 2.2:-15124724 | None:intergenic |
GGTATGATGGATTGCACTGG+TGG | 0.568752 | 2.2:+15124803 | MS.gene059892:CDS |
TGGCAATGCCAGTAGTTGGA+GGG | 0.574377 | 2.2:+15124678 | MS.gene059892:CDS |
GGCAATGCCAGTAGTTGGAG+GGG | 0.593366 | 2.2:+15124679 | MS.gene059892:CDS |
AAGACAATCTGAAGATGCAA+GGG | 0.603290 | 2.2:-15124723 | None:intergenic |
CAATGTGGTGCCTGTCACCA+AGG | 0.622527 | 2.2:+15124502 | MS.gene059892:CDS |
TGCACTGGTGGTGCTAGCAG+TGG | 0.626595 | 2.2:+15124815 | MS.gene059892:CDS |
GCTAAAGATTCAGTGCAGGA+AGG | 0.646657 | 2.2:+15124764 | MS.gene059892:CDS |
AAATCCGGCAAAGCCAGGCG+TGG | 0.649193 | 2.2:+15124658 | MS.gene059892:CDS |
TATGGTATGATGGATTGCAC+TGG | 0.652916 | 2.2:+15124800 | MS.gene059892:CDS |
TGCTGAAATATCTGTCAATG+TGG | 0.712131 | 2.2:+15124487 | MS.gene059892:CDS |
TGTGGTGCCTGTCACCAAGG+AGG | 0.732407 | 2.2:+15124505 | MS.gene059892:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
CATCAGGAATCTGATAATTA+TGG | - | chr2.2:15124541-15124560 | None:intergenic | 30.0% | |
!! | TGATGATTGTTTTGCTCATT+TGG | + | chr2.2:15124559-15124578 | MS.gene059892:CDS | 30.0% |
AAGACAATCTGAAGATGCAA+GGG | - | chr2.2:15124726-15124745 | None:intergenic | 35.0% | |
ACAGATATTTCAGCAACTTC+TGG | - | chr2.2:15124482-15124501 | None:intergenic | 35.0% | |
CAGATATTTCAGCAACTTCT+GGG | - | chr2.2:15124481-15124500 | None:intergenic | 35.0% | |
GATGTGCAGTTCAAATTCTA+TGG | + | chr2.2:15124581-15124600 | MS.gene059892:CDS | 35.0% | |
GGATATTGAGTATGGTATGA+TGG | + | chr2.2:15124790-15124809 | MS.gene059892:CDS | 35.0% | |
TGAGCAAAACAATCATCATC+AGG | - | chr2.2:15124557-15124576 | None:intergenic | 35.0% | |
TGCTGAAATATCTGTCAATG+TGG | + | chr2.2:15124487-15124506 | MS.gene059892:CDS | 35.0% | |
! | TCAGCCAGATTTTCAAAATC+CGG | + | chr2.2:15124643-15124662 | MS.gene059892:CDS | 35.0% |
!! | TTTGCCGGATTTTGAAAATC+TGG | - | chr2.2:15124650-15124669 | None:intergenic | 35.0% |
CAAGACAATCTGAAGATGCA+AGG | - | chr2.2:15124727-15124746 | None:intergenic | 40.0% | |
GGTTTATCGTCCAAAGTTGA+AGG | + | chr2.2:15124602-15124621 | MS.gene059892:CDS | 40.0% | |
TCCAAAGTTGAAGGAGTTCT+TGG | + | chr2.2:15124611-15124630 | MS.gene059892:CDS | 40.0% | |
TCCAAGAACTCCTTCAACTT+TGG | - | chr2.2:15124615-15124634 | None:intergenic | 40.0% | |
TTCTGCTAAAGATTCAGTGC+AGG | + | chr2.2:15124760-15124779 | MS.gene059892:CDS | 40.0% | |
! | GAAGGCATGGATATTGAGTA+TGG | + | chr2.2:15124782-15124801 | MS.gene059892:CDS | 40.0% |
!! | TATGGTATGATGGATTGCAC+TGG | + | chr2.2:15124800-15124819 | MS.gene059892:CDS | 40.0% |
ATCTGAAGATGCAAGGGATG+TGG | - | chr2.2:15124720-15124739 | None:intergenic | 45.0% | |
ATGGATTCTACTGTCCTCCT+TGG | - | chr2.2:15124522-15124541 | None:intergenic | 45.0% | |
GCTAAAGATTCAGTGCAGGA+AGG | + | chr2.2:15124764-15124783 | MS.gene059892:CDS | 45.0% | |
TTTCAAAATCCGGCAAAGCC+AGG | + | chr2.2:15124653-15124672 | MS.gene059892:CDS | 45.0% | |
AGATTCAGTGCAGGAAGGCA+TGG | + | chr2.2:15124769-15124788 | MS.gene059892:CDS | 50.0% | |
TGGCAATGCCAGTAGTTGGA+GGG | + | chr2.2:15124678-15124697 | MS.gene059892:CDS | 50.0% | |
TTGTCTTCCCCTCCAACTAC+TGG | - | chr2.2:15124689-15124708 | None:intergenic | 50.0% | |
!! | GGTATGATGGATTGCACTGG+TGG | + | chr2.2:15124803-15124822 | MS.gene059892:CDS | 50.0% |
CAATGTGGTGCCTGTCACCA+AGG | + | chr2.2:15124502-15124521 | MS.gene059892:CDS | 55.0% | |
GGCAATGCCAGTAGTTGGAG+GGG | + | chr2.2:15124679-15124698 | MS.gene059892:CDS | 55.0% | |
GTGGCAATGCCAGTAGTTGG+AGG | + | chr2.2:15124677-15124696 | MS.gene059892:CDS | 55.0% | |
! | CTACTGTCCTCCTTGGTGAC+AGG | - | chr2.2:15124515-15124534 | None:intergenic | 55.0% |
! | GGTGGTGCTAGCAGTGGTAA+TGG | + | chr2.2:15124821-15124840 | MS.gene059892:CDS | 55.0% |
AAATCCGGCAAAGCCAGGCG+TGG | + | chr2.2:15124658-15124677 | MS.gene059892:CDS | 60.0% | |
ACTACTGGCATTGCCACGCC+TGG | - | chr2.2:15124674-15124693 | None:intergenic | 60.0% | |
GGCGTGGCAATGCCAGTAGT+TGG | + | chr2.2:15124674-15124693 | MS.gene059892:CDS | 60.0% | |
TGTGGTGCCTGTCACCAAGG+AGG | + | chr2.2:15124505-15124524 | MS.gene059892:CDS | 60.0% | |
! | TGCACTGGTGGTGCTAGCAG+TGG | + | chr2.2:15124815-15124834 | MS.gene059892:CDS | 60.0% |
!! | ATTGCCACGCCTGGCTTTGC+CGG | - | chr2.2:15124665-15124684 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 15124467 | 15124862 | 15124467 | ID=MS.gene059892 |
chr2.2 | mRNA | 15124467 | 15124862 | 15124467 | ID=MS.gene059892.t1;Parent=MS.gene059892 |
chr2.2 | exon | 15124467 | 15124862 | 15124467 | ID=MS.gene059892.t1.exon1;Parent=MS.gene059892.t1 |
chr2.2 | CDS | 15124467 | 15124862 | 15124467 | ID=cds.MS.gene059892.t1;Parent=MS.gene059892.t1 |
Gene Sequence |
Protein sequence |