Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068828.t1 | XP_024640073.1 | 96.9 | 254 | 8 | 0 | 1 | 254 | 2 | 255 | 2.20E-136 | 495 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068828.t1 | Q8W4Y5 | 70.1 | 254 | 74 | 1 | 1 | 254 | 46 | 297 | 5.7e-101 | 368.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068828.t1 | A0A396HTB9 | 96.9 | 254 | 8 | 0 | 1 | 254 | 47 | 300 | 1.6e-136 | 495.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052286 | MS.gene068828 | 0.815261 | 1.01E-51 | -1.69E-46 |
| MS.gene053960 | MS.gene068828 | 0.952179 | 4.23E-110 | -1.69E-46 |
| MS.gene053962 | MS.gene068828 | 0.950997 | 5.16E-109 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068828.t1 | MTR_5g049240 | 95.331 | 257 | 12 | 0 | 1 | 257 | 2 | 258 | 0.0 | 503 |
| MS.gene068828.t1 | MTR_5g049240 | 95.331 | 257 | 12 | 0 | 1 | 257 | 47 | 303 | 1.43e-180 | 501 |
| MS.gene068828.t1 | MTR_5g049230 | 87.649 | 251 | 31 | 0 | 1 | 251 | 47 | 297 | 1.22e-160 | 448 |
| MS.gene068828.t1 | MTR_8g069850 | 74.118 | 255 | 66 | 0 | 1 | 255 | 47 | 301 | 1.22e-141 | 400 |
| MS.gene068828.t1 | MTR_4g086150 | 42.913 | 254 | 134 | 4 | 2 | 252 | 42 | 287 | 6.28e-63 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068828.t1 | AT1G13580 | 69.412 | 255 | 78 | 0 | 1 | 255 | 47 | 301 | 8.88e-128 | 365 |
| MS.gene068828.t1 | AT1G13580 | 69.412 | 255 | 78 | 0 | 1 | 255 | 47 | 301 | 8.88e-128 | 365 |
| MS.gene068828.t1 | AT3G25540 | 62.948 | 251 | 90 | 2 | 5 | 255 | 56 | 303 | 2.04e-115 | 333 |
| MS.gene068828.t1 | AT3G25540 | 62.948 | 251 | 90 | 2 | 5 | 255 | 56 | 303 | 2.04e-115 | 333 |
| MS.gene068828.t1 | AT1G26200 | 58.397 | 262 | 99 | 3 | 1 | 255 | 46 | 304 | 7.95e-107 | 312 |
| MS.gene068828.t1 | AT1G26200 | 54.945 | 273 | 102 | 3 | 1 | 255 | 46 | 315 | 8.70e-104 | 305 |
| MS.gene068828.t1 | AT1G13580 | 70.833 | 192 | 56 | 0 | 1 | 192 | 47 | 238 | 6.32e-96 | 281 |
| MS.gene068828.t1 | AT3G25540 | 65.426 | 188 | 63 | 1 | 5 | 192 | 56 | 241 | 2.24e-90 | 268 |
| MS.gene068828.t1 | AT1G26200 | 60.938 | 192 | 72 | 1 | 1 | 192 | 46 | 234 | 1.90e-83 | 249 |
| MS.gene068828.t1 | AT3G19260 | 47.436 | 234 | 116 | 2 | 22 | 255 | 66 | 292 | 3.18e-71 | 221 |
Find 42 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATACTTGCTTTAATATTC+TGG | 0.136312 | 5.2:+43159717 | MS.gene068828:CDS |
| AAAGAAGATTAGGAAATTTA+AGG | 0.149891 | 5.2:+43159360 | MS.gene068828:CDS |
| CGACGCTACTGATGTGTTTC+TGG | 0.166561 | 5.2:+43161903 | MS.gene068828:CDS |
| TGCTTGTTCTTAATATTTAT+TGG | 0.221668 | 5.2:+43163704 | MS.gene068828:CDS |
| CCAGAATATTAAAGCAAGTA+TGG | 0.250823 | 5.2:-43159717 | None:intergenic |
| GCATCATTTACTACCCATTC+TGG | 0.256348 | 5.2:+43162013 | MS.gene068828:CDS |
| GGTGATTGACACCTTGAAAT+TGG | 0.282939 | 5.2:+43163621 | MS.gene068828:CDS |
| TGATTCTGCACCGCTGTATA+TGG | 0.289604 | 5.2:-43161941 | None:intergenic |
| GCACTCAGGTTTGTTCGAAT+TGG | 0.314114 | 5.2:+43161859 | MS.gene068828:intron |
| TGGTCCAAGACAAGACAAAA+AGG | 0.376327 | 5.2:-43161984 | None:intergenic |
| CATACTTGCTTTAATATTCT+GGG | 0.380439 | 5.2:+43159718 | MS.gene068828:CDS |
| TTAATTCCATTTAGAGTTTG+AGG | 0.386356 | 5.2:-43163880 | None:intergenic |
| GAGGTACCATTTCTTGTAGT+TGG | 0.388697 | 5.2:-43163861 | None:intergenic |
| GTTGGTCAAATCTGCGCAAA+AGG | 0.396663 | 5.2:+43163751 | MS.gene068828:CDS |
| CTGATGCTTCGGATGCTTGT+TGG | 0.406436 | 5.2:+43163733 | MS.gene068828:CDS |
| AAGATACCAACTACAAGAAA+TGG | 0.411965 | 5.2:+43163855 | MS.gene068828:intron |
| CAGATGCTTGTCCAATTTCA+AGG | 0.422664 | 5.2:-43163632 | None:intergenic |
| TCGGGCCAGGGAATCAGATA+TGG | 0.427253 | 5.2:+43159482 | MS.gene068828:CDS |
| ATGATACGAGAAAGAAGATT+AGG | 0.436397 | 5.2:+43159350 | MS.gene068828:CDS |
| CTTGAAATTGGACAAGCATC+TGG | 0.449431 | 5.2:+43163633 | MS.gene068828:CDS |
| CATCATTTACTACCCATTCT+GGG | 0.450526 | 5.2:+43162014 | MS.gene068828:CDS |
| ATTGGTGGGTGCTGATGCTT+CGG | 0.460019 | 5.2:+43163722 | MS.gene068828:CDS |
| ACTGATGTGTTTCTGGAGAT+AGG | 0.473929 | 5.2:+43161910 | MS.gene068828:CDS |
| GTTAGTGAAGATATTAGATC+TGG | 0.474457 | 5.2:+43163778 | MS.gene068828:CDS |
| TCTGGGTTCTTCGAAGTACA+AGG | 0.495871 | 5.2:+43162031 | MS.gene068828:CDS |
| TTGTTCTTAATATTTATTGG+TGG | 0.510641 | 5.2:+43163707 | MS.gene068828:CDS |
| TCTGGCCATATCTGATTCCC+TGG | 0.512470 | 5.2:-43159487 | None:intergenic |
| TGTTCTTAATATTTATTGGT+GGG | 0.517092 | 5.2:+43163708 | MS.gene068828:CDS |
| GGGCTGTATATGTATGGTGC+TGG | 0.521303 | 5.2:+43159680 | MS.gene068828:CDS |
| TTGGTCAAATCTGCGCAAAA+GGG | 0.554148 | 5.2:+43163752 | MS.gene068828:CDS |
| TTGAAGGGGCTGTATATGTA+TGG | 0.554283 | 5.2:+43159674 | MS.gene068828:CDS |
| TACTTCGAAGAACCCAGAAT+GGG | 0.559855 | 5.2:-43162026 | None:intergenic |
| ACACATCAGTAGCGTCGTGA+AGG | 0.571391 | 5.2:-43161897 | None:intergenic |
| CTGCAACATATGATGAACCT+TGG | 0.572580 | 5.2:+43159434 | MS.gene068828:CDS |
| CACATCAGTAGCGTCGTGAA+GGG | 0.597324 | 5.2:-43161896 | None:intergenic |
| GTACTTCGAAGAACCCAGAA+TGG | 0.597437 | 5.2:-43162027 | None:intergenic |
| GGAAATTTAAGGAATCAGCA+TGG | 0.606420 | 5.2:+43159371 | MS.gene068828:CDS |
| GTAGTAAATGATGCGCAGTA+TGG | 0.606821 | 5.2:-43162004 | None:intergenic |
| ATTTGCAGAAAGTGGCCAGA+CGG | 0.612078 | 5.2:+43159284 | None:intergenic |
| AGAGACAACATGATGTGTCA+TGG | 0.614305 | 5.2:-43159768 | None:intergenic |
| GAAATTGGACAAGCATCTGG+TGG | 0.641961 | 5.2:+43163636 | MS.gene068828:CDS |
| GGCAAAATGTCCATATACAG+CGG | 0.676062 | 5.2:+43161931 | MS.gene068828:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAAAAAATATTACATT+TGG | + | chr5.2:43163008-43163027 | MS.gene068828:intron | 10.0% |
| !! | ATTAAATTAAATTTGAACAA+TGG | - | chr5.2:43163562-43163581 | None:intergenic | 10.0% |
| !! | AAAAAATAAAAAAAAGAGCA+AGG | - | chr5.2:43162476-43162495 | None:intergenic | 15.0% |
| !! | ATATTAAAACGAAAAAAAGA+AGG | + | chr5.2:43159950-43159969 | MS.gene068828:intron | 15.0% |
| !! | TATAAGCTTATTAGTATTTA+TGG | + | chr5.2:43162775-43162794 | MS.gene068828:intron | 15.0% |
| !! | TATTAAAACGAAAAAAAGAA+GGG | + | chr5.2:43159951-43159970 | MS.gene068828:intron | 15.0% |
| !! | TGAAATTCATATTTCAAAAA+AGG | + | chr5.2:43162106-43162125 | MS.gene068828:intron | 15.0% |
| !! | TTCAATCTGAAAATTAAAAA+TGG | - | chr5.2:43159653-43159672 | None:intergenic | 15.0% |
| !!! | AATTTTGCTTTAAAATAATC+TGG | + | chr5.2:43160618-43160637 | MS.gene068828:intron | 15.0% |
| !!! | ATTTTGCTTTAAAATAATCT+GGG | + | chr5.2:43160619-43160638 | MS.gene068828:intron | 15.0% |
| !!! | TACTGATACAAAATATTTTT+GGG | + | chr5.2:43159459-43159478 | MS.gene068828:CDS | 15.0% |
| !!! | TTACTGATACAAAATATTTT+TGG | + | chr5.2:43159458-43159477 | MS.gene068828:CDS | 15.0% |
| !! | AAAGAAGATTAGGAAATTTA+AGG | + | chr5.2:43159360-43159379 | MS.gene068828:CDS | 20.0% |
| !! | AAATAAAATAAAGTTAGTGC+AGG | - | chr5.2:43159902-43159921 | None:intergenic | 20.0% |
| !! | AAATTGAACTTCCAATTTAA+AGG | - | chr5.2:43162410-43162429 | None:intergenic | 20.0% |
| !! | AATTGAACTTCCAATTTAAA+GGG | - | chr5.2:43162409-43162428 | None:intergenic | 20.0% |
| !! | AGGAAAACAAAATGTAAATT+CGG | - | chr5.2:43162074-43162093 | None:intergenic | 20.0% |
| !! | CTAAATATCCATTACATATA+TGG | + | chr5.2:43163805-43163824 | MS.gene068828:intron | 20.0% |
| !! | TAAAGAACAAACCTAAAATT+AGG | + | chr5.2:43160010-43160029 | MS.gene068828:intron | 20.0% |
| !! | TGCTTGTTCTTAATATTTAT+TGG | + | chr5.2:43163704-43163723 | MS.gene068828:CDS | 20.0% |
| !! | TGTTCTTAATATTTATTGGT+GGG | + | chr5.2:43163708-43163727 | MS.gene068828:CDS | 20.0% |
| !! | TTACCATTGCATAAAAATTA+AGG | - | chr5.2:43162440-43162459 | None:intergenic | 20.0% |
| !! | TTGTTCTTAATATTTATTGG+TGG | + | chr5.2:43163707-43163726 | MS.gene068828:CDS | 20.0% |
| !! | TTTATATAATCACTTAATGC+AGG | + | chr5.2:43162604-43162623 | MS.gene068828:intron | 20.0% |
| !! | TTTCAAACCCAATAAAAAAT+TGG | - | chr5.2:43163410-43163429 | None:intergenic | 20.0% |
| !!! | AACTTTAACTTATCTAGAAT+AGG | + | chr5.2:43161235-43161254 | MS.gene068828:intron | 20.0% |
| !!! | AATCTGAAGTAGTAAATTTA+TGG | + | chr5.2:43162729-43162748 | MS.gene068828:intron | 20.0% |
| !!! | AATTTTCAGATTGAAATTGA+AGG | + | chr5.2:43159658-43159677 | MS.gene068828:intron | 20.0% |
| !!! | ATTTTCAGATTGAAATTGAA+GGG | + | chr5.2:43159659-43159678 | MS.gene068828:intron | 20.0% |
| !!! | CAGGTTTTTTTATTCATAAA+CGG | - | chr5.2:43162295-43162314 | None:intergenic | 20.0% |
| !!! | GAATTTTCAGTTTGAATTAT+AGG | + | chr5.2:43160558-43160577 | MS.gene068828:intron | 20.0% |
| !!! | TAGGTTTCCAATTTTTTATT+GGG | + | chr5.2:43163400-43163419 | MS.gene068828:intron | 20.0% |
| !!! | TCTTGATGATTTACTATTAT+AGG | + | chr5.2:43162568-43162587 | MS.gene068828:intron | 20.0% |
| !!! | TTAGGTTTCCAATTTTTTAT+TGG | + | chr5.2:43163399-43163418 | MS.gene068828:intron | 20.0% |
| !!! | TTCATACATATTTTAAGAGT+AGG | - | chr5.2:43160253-43160272 | None:intergenic | 20.0% |
| !!! | TTCATACATATTTTTAGAGT+AGG | - | chr5.2:43160151-43160170 | None:intergenic | 20.0% |
| !!! | TTCTGTTTTGAACATAATTT+TGG | - | chr5.2:43162195-43162214 | None:intergenic | 20.0% |
| !!! | TTTAGGTTTGTTCTTTAATT+GGG | - | chr5.2:43160007-43160026 | None:intergenic | 20.0% |
| !!! | TTTGAAATATGAATTTCAAC+AGG | - | chr5.2:43162104-43162123 | None:intergenic | 20.0% |
| !!! | TTTTAGGTTTGTTCTTTAAT+TGG | - | chr5.2:43160008-43160027 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTGAAAGATTATT+TGG | - | chr5.2:43161608-43161627 | None:intergenic | 20.0% |
| ! | AAATATTACATTTGGCAGTT+AGG | + | chr5.2:43163016-43163035 | MS.gene068828:intron | 25.0% |
| ! | AACAAAATGTAAATTCGGAA+CGG | - | chr5.2:43162069-43162088 | None:intergenic | 25.0% |
| ! | AACACCTAGATATATAAAAG+GGG | + | chr5.2:43161287-43161306 | MS.gene068828:intron | 25.0% |
| ! | AAGAAAACATGATGAACAAT+TGG | + | chr5.2:43160845-43160864 | MS.gene068828:intron | 25.0% |
| ! | AATAACAATTTGTACAAGTG+TGG | - | chr5.2:43162852-43162871 | None:intergenic | 25.0% |
| ! | AATTTACTACTTCAGATTAC+AGG | - | chr5.2:43162727-43162746 | None:intergenic | 25.0% |
| ! | ACTGCTGAATTAATAAACTT+AGG | - | chr5.2:43159628-43159647 | None:intergenic | 25.0% |
| ! | AGCAAGAAAAATCAATAATC+AGG | + | chr5.2:43161633-43161652 | MS.gene068828:intron | 25.0% |
| ! | ATAAAAATATTTGTGTGGAG+TGG | - | chr5.2:43161064-43161083 | None:intergenic | 25.0% |
| ! | ATAGCAGATTATACATTAGA+TGG | - | chr5.2:43160657-43160676 | None:intergenic | 25.0% |
| ! | CATACTTGCTTTAATATTCT+GGG | + | chr5.2:43159718-43159737 | MS.gene068828:CDS | 25.0% |
| ! | CATTCAACAAACAAAGTTTA+GGG | + | chr5.2:43161660-43161679 | MS.gene068828:intron | 25.0% |
| ! | CTTGCATAAAAATATTTGTG+TGG | - | chr5.2:43161069-43161088 | None:intergenic | 25.0% |
| ! | GAACACCTAGATATATAAAA+GGG | + | chr5.2:43161286-43161305 | MS.gene068828:intron | 25.0% |
| ! | GAAGAAAACAATTAAACAGA+AGG | - | chr5.2:43163585-43163604 | None:intergenic | 25.0% |
| ! | TACCTTCTTTATCATCTAAA+GGG | - | chr5.2:43162265-43162284 | None:intergenic | 25.0% |
| ! | TTACCTTCTTTATCATCTAA+AGG | - | chr5.2:43162266-43162285 | None:intergenic | 25.0% |
| ! | TTAGAAAGCCATATATGTAA+TGG | - | chr5.2:43163816-43163835 | None:intergenic | 25.0% |
| ! | TTTCCTTCAGAATTTATACT+TGG | - | chr5.2:43161120-43161139 | None:intergenic | 25.0% |
| ! | TTTCTTAAGCAGAAAAAGTT+TGG | + | chr5.2:43162630-43162649 | MS.gene068828:intron | 25.0% |
| !! | AGTCCTTAATTTTTATGCAA+TGG | + | chr5.2:43162434-43162453 | MS.gene068828:intron | 25.0% |
| !! | ATCTTTGTTTCAGAGAAATT+TGG | - | chr5.2:43161761-43161780 | None:intergenic | 25.0% |
| !! | TATTTTGTATCAGTAAACCA+AGG | - | chr5.2:43159454-43159473 | None:intergenic | 25.0% |
| !! | TCATACTTTTCCCTTTAAAT+TGG | + | chr5.2:43162396-43162415 | MS.gene068828:intron | 25.0% |
| !! | TCTTACTTAATCTTTTGATC+TGG | - | chr5.2:43159508-43159527 | None:intergenic | 25.0% |
| !! | TTCTACTTTAGAGATTTGTT+AGG | - | chr5.2:43160040-43160059 | None:intergenic | 25.0% |
| !! | TTGTGTTATCGTACATTTTT+AGG | + | chr5.2:43159801-43159820 | MS.gene068828:CDS | 25.0% |
| !! | TTTTCAAACCACTTAATGAA+GGG | - | chr5.2:43160997-43161016 | None:intergenic | 25.0% |
| !! | TTTTCAGATTGAAATTGAAG+GGG | + | chr5.2:43159660-43159679 | MS.gene068828:intron | 25.0% |
| !! | TTTTTCTGCAGTTTATGAAT+TGG | + | chr5.2:43161373-43161392 | MS.gene068828:intron | 25.0% |
| !!! | AAATCAGCCTTTACTTTTAA+AGG | - | chr5.2:43163358-43163377 | None:intergenic | 25.0% |
| !!! | AACAAATCTCTAAAGTAGAA+AGG | + | chr5.2:43160040-43160059 | MS.gene068828:intron | 25.0% |
| !!! | AATATTTTTGACAGCATTCA+TGG | - | chr5.2:43163262-43163281 | None:intergenic | 25.0% |
| !!! | ATACAAAATATTTTTGGGTC+GGG | + | chr5.2:43159464-43159483 | MS.gene068828:CDS | 25.0% |
| !!! | GATACAAAATATTTTTGGGT+CGG | + | chr5.2:43159463-43159482 | MS.gene068828:CDS | 25.0% |
| !!! | GTTTTTTGACAAAGTTACAA+AGG | - | chr5.2:43160592-43160611 | None:intergenic | 25.0% |
| !!! | TATAAGAACTTTTTTGTCAG+TGG | - | chr5.2:43162759-43162778 | None:intergenic | 25.0% |
| AAAAAGAAGGGTTACAAGAT+TGG | + | chr5.2:43159963-43159982 | MS.gene068828:intron | 30.0% | |
| AAAAGAAGGGTTACAAGATT+GGG | + | chr5.2:43159964-43159983 | MS.gene068828:intron | 30.0% | |
| AAACTGAAAATTCTCTCAAC+TGG | - | chr5.2:43160551-43160570 | None:intergenic | 30.0% | |
| AACCAAGTAAAGTTTGTCTT+TGG | - | chr5.2:43163443-43163462 | None:intergenic | 30.0% | |
| AAGATACCAACTACAAGAAA+TGG | + | chr5.2:43163855-43163874 | MS.gene068828:intron | 30.0% | |
| AATCAAGCTATTGAAGGAAT+TGG | - | chr5.2:43161095-43161114 | None:intergenic | 30.0% | |
| AATTCCTTCAATAGCTTGAT+TGG | + | chr5.2:43161094-43161113 | MS.gene068828:intron | 30.0% | |
| AGACAAACTTTACTTGGTTT+AGG | + | chr5.2:43163444-43163463 | MS.gene068828:intron | 30.0% | |
| AGTTAGAAGCTAATCTAAAC+TGG | - | chr5.2:43162696-43162715 | None:intergenic | 30.0% | |
| ATCATTATATCCTGTAGGAT+AGG | + | chr5.2:43163068-43163087 | MS.gene068828:intron | 30.0% | |
| ATGATACGAGAAAGAAGATT+AGG | + | chr5.2:43159350-43159369 | MS.gene068828:CDS | 30.0% | |
| ATTATACATTAGATGGCAGA+TGG | - | chr5.2:43160650-43160669 | None:intergenic | 30.0% | |
| ATTATTTGTTCAATGCACTC+AGG | + | chr5.2:43161845-43161864 | MS.gene068828:intron | 30.0% | |
| ATTTCGGAATGAAATGTCAT+CGG | + | chr5.2:43161718-43161737 | MS.gene068828:intron | 30.0% | |
| CAAGCACTTAATTGGTAAAA+TGG | - | chr5.2:43162540-43162559 | None:intergenic | 30.0% | |
| CAATTGGATTATTGTTCCTT+AGG | + | chr5.2:43160861-43160880 | MS.gene068828:intron | 30.0% | |
| CCAGAATATTAAAGCAAGTA+TGG | - | chr5.2:43159720-43159739 | None:intergenic | 30.0% | |
| CCATACTTGCTTTAATATTC+TGG | + | chr5.2:43159717-43159736 | MS.gene068828:CDS | 30.0% | |
| CCATTCAACAAACAAAGTTT+AGG | + | chr5.2:43161659-43161678 | MS.gene068828:intron | 30.0% | |
| CGGTAAAATAATTCCAACAT+AGG | + | chr5.2:43160921-43160940 | MS.gene068828:intron | 30.0% | |
| GACAAACTTTACTTGGTTTA+GGG | + | chr5.2:43163445-43163464 | MS.gene068828:intron | 30.0% | |
| GAGAACTCTTTGTTAAGAAT+GGG | + | chr5.2:43163203-43163222 | MS.gene068828:intron | 30.0% | |
| GGAACACCTAGATATATAAA+AGG | + | chr5.2:43161285-43161304 | MS.gene068828:intron | 30.0% | |
| GTTAGAAGCTAATCTAAACT+GGG | - | chr5.2:43162695-43162714 | None:intergenic | 30.0% | |
| GTTAGTGAAGATATTAGATC+TGG | + | chr5.2:43163778-43163797 | MS.gene068828:CDS | 30.0% | |
| TAAAGTTGAAACTTGCAACT+TGG | - | chr5.2:43161222-43161241 | None:intergenic | 30.0% | |
| TAACTAATCATGGATACGTT+AGG | + | chr5.2:43162336-43162355 | MS.gene068828:intron | 30.0% | |
| TAATAATAACTGACTGCTAC+TGG | - | chr5.2:43163136-43163155 | None:intergenic | 30.0% | |
| TGAATCACAGAATAAACTTC+AGG | - | chr5.2:43163515-43163534 | None:intergenic | 30.0% | |
| TGATATCCAAGTCTGATATT+AGG | + | chr5.2:43163381-43163400 | MS.gene068828:intron | 30.0% | |
| TGGAAATCATTATATCCTGT+AGG | + | chr5.2:43163063-43163082 | MS.gene068828:intron | 30.0% | |
| TGGCAATTTGACTACTAAAT+TGG | - | chr5.2:43160522-43160541 | None:intergenic | 30.0% | |
| TGTAAGAACAAAGTGGAAAT+TGG | + | chr5.2:43161467-43161486 | MS.gene068828:intron | 30.0% | |
| TTCCACTTTGTTCTTACAAA+GGG | - | chr5.2:43161465-43161484 | None:intergenic | 30.0% | |
| TTCCCTTTAGATGATAAAGA+AGG | + | chr5.2:43162260-43162279 | MS.gene068828:intron | 30.0% | |
| TTCTTAATGCCTTTACCTAA+AGG | + | chr5.2:43159836-43159855 | MS.gene068828:intron | 30.0% | |
| TTGAAGCAGCAAAATATGAA+TGG | - | chr5.2:43162948-43162967 | None:intergenic | 30.0% | |
| TTTCCACTTTGTTCTTACAA+AGG | - | chr5.2:43161466-43161485 | None:intergenic | 30.0% | |
| TTTGTTTCAGAGAAATTTGG+AGG | - | chr5.2:43161758-43161777 | None:intergenic | 30.0% | |
| ! | ATTTTACCGACAAAGATCAA+TGG | - | chr5.2:43160910-43160929 | None:intergenic | 30.0% |
| ! | CATCATGTTTTCTTTCCATT+TGG | - | chr5.2:43160839-43160858 | None:intergenic | 30.0% |
| ! | CATTTTACCAATTAAGTGCT+TGG | + | chr5.2:43162538-43162557 | MS.gene068828:intron | 30.0% |
| ! | CCTAAACTTTGTTTGTTGAA+TGG | - | chr5.2:43161662-43161681 | None:intergenic | 30.0% |
| ! | GTTTTCAAACCACTTAATGA+AGG | - | chr5.2:43160998-43161017 | None:intergenic | 30.0% |
| ! | TGATTTTCCAAGCACTTAAT+TGG | - | chr5.2:43162548-43162567 | None:intergenic | 30.0% |
| ! | TGTTAGGTTTGCCTAATTTT+AGG | - | chr5.2:43160024-43160043 | None:intergenic | 30.0% |
| ! | TTATCCTTTTTGTCTTGTCT+TGG | + | chr5.2:43161980-43161999 | MS.gene068828:CDS | 30.0% |
| ! | TTTCTGGCCTTTAAAAGTAA+AGG | + | chr5.2:43163348-43163367 | MS.gene068828:intron | 30.0% |
| ! | TTTTACCGACAAAGATCAAT+GGG | - | chr5.2:43160909-43160928 | None:intergenic | 30.0% |
| !! | ATTCAAGAATCTTTGAGACA+TGG | - | chr5.2:43161326-43161345 | None:intergenic | 30.0% |
| !! | GAAGTGCGTTTATTTTCTAT+CGG | + | chr5.2:43159393-43159412 | MS.gene068828:CDS | 30.0% |
| AAAGGCCAATACAACATTCT+GGG | + | chr5.2:43160354-43160373 | MS.gene068828:intron | 35.0% | |
| AACCAACTTAAGTGTCCTTT+AGG | - | chr5.2:43159854-43159873 | None:intergenic | 35.0% | |
| AACCATATGGACATTGCTAA+AGG | + | chr5.2:43160336-43160355 | MS.gene068828:intron | 35.0% | |
| AAGAGTAGGTAATGTCCATA+TGG | - | chr5.2:43160239-43160258 | None:intergenic | 35.0% | |
| ACAAAATTTCTACTGTGGCT+TGG | - | chr5.2:43161027-43161046 | None:intergenic | 35.0% | |
| ACCTAGATATATAAAAGGGG+TGG | + | chr5.2:43161290-43161309 | MS.gene068828:intron | 35.0% | |
| AGCCAAAGACAAACTTTACT+TGG | + | chr5.2:43163438-43163457 | MS.gene068828:intron | 35.0% | |
| AGGATAGGATGAGATTATGA+TGG | + | chr5.2:43163083-43163102 | MS.gene068828:intron | 35.0% | |
| AGGTTGACAATTAAAGTCAC+TGG | - | chr5.2:43159608-43159627 | None:intergenic | 35.0% | |
| AGTGATAACTGATAACTAGC+AGG | - | chr5.2:43161152-43161171 | None:intergenic | 35.0% | |
| ATAATCTCATCCTATCCTAC+AGG | - | chr5.2:43163081-43163100 | None:intergenic | 35.0% | |
| ATGCTTAATTCCATGCCAAA+TGG | + | chr5.2:43160821-43160840 | MS.gene068828:intron | 35.0% | |
| ATTCTAGCATCACTTTCAAC+TGG | - | chr5.2:43160481-43160500 | None:intergenic | 35.0% | |
| ATTCTCTCAACTGGAATAGA+TGG | - | chr5.2:43160542-43160561 | None:intergenic | 35.0% | |
| CACCAACAAAATTTCTACTG+TGG | - | chr5.2:43161032-43161051 | None:intergenic | 35.0% | |
| CACGTAGACAAAATATCAAC+AGG | - | chr5.2:43162314-43162333 | None:intergenic | 35.0% | |
| CATCATTTACTACCCATTCT+GGG | + | chr5.2:43162014-43162033 | MS.gene068828:CDS | 35.0% | |
| CCAGAAATAACATGTCAAGA+AGG | - | chr5.2:43163335-43163354 | None:intergenic | 35.0% | |
| CGCTTCTTCAGAATATGAAT+AGG | - | chr5.2:43162147-43162166 | None:intergenic | 35.0% | |
| CTTAAGCAGAAAAAGTTTGG+TGG | + | chr5.2:43162633-43162652 | MS.gene068828:intron | 35.0% | |
| CTTAAGTGTCCTTTAGGTAA+AGG | - | chr5.2:43159848-43159867 | None:intergenic | 35.0% | |
| GAAATGTATCCAAGCTAACT+AGG | + | chr5.2:43162918-43162937 | MS.gene068828:intron | 35.0% | |
| GAATTTCAACAGGTGACAAA+AGG | - | chr5.2:43162094-43162113 | None:intergenic | 35.0% | |
| GCTATGAAAAGAGACTCATA+AGG | + | chr5.2:43161413-43161432 | MS.gene068828:intron | 35.0% | |
| GGAAATTTAAGGAATCAGCA+TGG | + | chr5.2:43159371-43159390 | MS.gene068828:CDS | 35.0% | |
| GGAGAACTCTTTGTTAAGAA+TGG | + | chr5.2:43163202-43163221 | MS.gene068828:intron | 35.0% | |
| GGATAGGATGAGATTATGAT+GGG | + | chr5.2:43163084-43163103 | MS.gene068828:intron | 35.0% | |
| GTCAGCTATAACTATCAATG+AGG | - | chr5.2:43160960-43160979 | None:intergenic | 35.0% | |
| TAAAGGCCAATACAACATTC+TGG | + | chr5.2:43160353-43160372 | MS.gene068828:intron | 35.0% | |
| TACCTAAAGGACACTTAAGT+TGG | + | chr5.2:43159849-43159868 | MS.gene068828:intron | 35.0% | |
| TAGAAAGGTCTAGTGAAACT+AGG | + | chr5.2:43160055-43160074 | MS.gene068828:intron | 35.0% | |
| TCCACTTTGTTCTTACAAAG+GGG | - | chr5.2:43161464-43161483 | None:intergenic | 35.0% | |
| TCTACGTGCTTAACTAATCA+TGG | + | chr5.2:43162326-43162345 | MS.gene068828:intron | 35.0% | |
| TCTCCACAAAACAAAAGTTC+TGG | + | chr5.2:43160421-43160440 | MS.gene068828:intron | 35.0% | |
| TGATTCCCAGAATGTTGTAT+TGG | - | chr5.2:43160362-43160381 | None:intergenic | 35.0% | |
| TGGAAACCTAATATCAGACT+TGG | - | chr5.2:43163390-43163409 | None:intergenic | 35.0% | |
| TGGCCAAGTATAAATTCTGA+AGG | + | chr5.2:43161114-43161133 | MS.gene068828:intron | 35.0% | |
| TTCAAAGGGAAACCTATCTT+TGG | - | chr5.2:43161261-43161280 | None:intergenic | 35.0% | |
| TTCACAGCTTTCATGGAAAT+TGG | + | chr5.2:43161542-43161561 | MS.gene068828:intron | 35.0% | |
| TTCAGCTCATGATGAATTGT+GGG | + | chr5.2:43160684-43160703 | MS.gene068828:intron | 35.0% | |
| TTCTAATGTGACTTCTTGAC+TGG | + | chr5.2:43163830-43163849 | MS.gene068828:intron | 35.0% | |
| TTGAAACTTGCAACTTGGAA+GGG | - | chr5.2:43161217-43161236 | None:intergenic | 35.0% | |
| ! | ACCACCCCTTTTATATATCT+AGG | - | chr5.2:43161294-43161313 | None:intergenic | 35.0% |
| ! | AGCCACAGTAGAAATTTTGT+TGG | + | chr5.2:43161027-43161046 | MS.gene068828:intron | 35.0% |
| ! | ATAGGTTTCCCTTTGAAGAT+GGG | + | chr5.2:43161264-43161283 | MS.gene068828:intron | 35.0% |
| ! | ATCTAGAATAGGCCAAAGAT+AGG | + | chr5.2:43161246-43161265 | MS.gene068828:intron | 35.0% |
| ! | CACAAAACAAAAGTTCTGGT+GGG | + | chr5.2:43160425-43160444 | MS.gene068828:intron | 35.0% |
| ! | CTGCATTGTAAGTCTGAAAT+TGG | + | chr5.2:43163181-43163200 | MS.gene068828:intron | 35.0% |
| ! | GTTCTGAACTGATAAGTGAA+TGG | - | chr5.2:43160742-43160761 | None:intergenic | 35.0% |
| ! | TGAGTCTCTTTTCATAGCTA+TGG | - | chr5.2:43161411-43161430 | None:intergenic | 35.0% |
| ! | TGTTTTCTTTCCATTTGGCA+TGG | - | chr5.2:43160834-43160853 | None:intergenic | 35.0% |
| ! | TTTTCGAAAAATCAACCGTC+TGG | - | chr5.2:43159302-43159321 | None:intergenic | 35.0% |
| !! | AAAGTGGAAATTGGCTTTCA+TGG | + | chr5.2:43161476-43161495 | MS.gene068828:intron | 35.0% |
| !! | AGACGGTTGATTTTTCGAAA+AGG | + | chr5.2:43159301-43159320 | MS.gene068828:CDS | 35.0% |
| !! | CCTTCTTGACATGTTATTTC+TGG | + | chr5.2:43163332-43163351 | MS.gene068828:intron | 35.0% |
| !! | GACGGTTGATTTTTCGAAAA+GGG | + | chr5.2:43159302-43159321 | MS.gene068828:CDS | 35.0% |
| !! | TGTGGAGATTTTTCTAGCAA+GGG | - | chr5.2:43160409-43160428 | None:intergenic | 35.0% |
| !! | TTGTGGAGATTTTTCTAGCA+AGG | - | chr5.2:43160410-43160429 | None:intergenic | 35.0% |
| !!! | TCTTCTTTTTTGCAGCTATG+AGG | + | chr5.2:43163600-43163619 | MS.gene068828:intron | 35.0% |
| !!! | TTGGTTTTGTGAGCACATTA+TGG | + | chr5.2:43159868-43159887 | MS.gene068828:intron | 35.0% |
| AAACGTCTTCACAGCTTTCA+TGG | + | chr5.2:43161535-43161554 | MS.gene068828:intron | 40.0% | |
| AAACTGAGAGGTCAGGATTA+AGG | + | chr5.2:43162966-43162985 | MS.gene068828:intron | 40.0% | |
| AAGTGCCCATTGATCTTTGT+CGG | + | chr5.2:43160901-43160920 | MS.gene068828:intron | 40.0% | |
| AATGGATGACCTAGTTAGCT+TGG | - | chr5.2:43162930-43162949 | None:intergenic | 40.0% | |
| ACAATCTCTCTGATGAGCTA+TGG | - | chr5.2:43160093-43160112 | None:intergenic | 40.0% | |
| AGAGACAACATGATGTGTCA+TGG | - | chr5.2:43159771-43159790 | None:intergenic | 40.0% | |
| ATAGCTCATCAGAGAGATTG+TGG | + | chr5.2:43160092-43160111 | MS.gene068828:intron | 40.0% | |
| ATGAAGGGAGCTTAGCTATA+AGG | - | chr5.2:43160982-43161001 | None:intergenic | 40.0% | |
| ATTTCCTTCACCTATGTTCC+AGG | + | chr5.2:43160770-43160789 | MS.gene068828:intron | 40.0% | |
| CAATCTATGCTAATGCTACC+TGG | - | chr5.2:43160791-43160810 | None:intergenic | 40.0% | |
| CAGATGCTTGTCCAATTTCA+AGG | - | chr5.2:43163635-43163654 | None:intergenic | 40.0% | |
| CATAGCTATGGTGAGTATTC+TGG | - | chr5.2:43161399-43161418 | None:intergenic | 40.0% | |
| CCACTTTGTTCTTACAAAGG+GGG | - | chr5.2:43161463-43161482 | None:intergenic | 40.0% | |
| CCTGTCCATTATAGTCAGAA+GGG | + | chr5.2:43161189-43161208 | MS.gene068828:intron | 40.0% | |
| CTGCAACATATGATGAACCT+TGG | + | chr5.2:43159434-43159453 | MS.gene068828:CDS | 40.0% | |
| CTTGAAAGATTATTTGGCCG+TGG | - | chr5.2:43161602-43161621 | None:intergenic | 40.0% | |
| CTTGAAATTGGACAAGCATC+TGG | + | chr5.2:43163633-43163652 | MS.gene068828:CDS | 40.0% | |
| GAGGACATTGTGTGTATGTT+TGG | + | chr5.2:43163043-43163062 | MS.gene068828:intron | 40.0% | |
| GCATCATTTACTACCCATTC+TGG | + | chr5.2:43162013-43162032 | MS.gene068828:CDS | 40.0% | |
| GGCAAAATGTCCATATACAG+CGG | + | chr5.2:43161931-43161950 | MS.gene068828:CDS | 40.0% | |
| GGTGATTGACACCTTGAAAT+TGG | + | chr5.2:43163621-43163640 | MS.gene068828:CDS | 40.0% | |
| GTAATGTCCATATGGTTCCT+TGG | - | chr5.2:43160231-43160250 | None:intergenic | 40.0% | |
| GTAGTAAATGATGCGCAGTA+TGG | - | chr5.2:43162007-43162026 | None:intergenic | 40.0% | |
| GTTCAGCTCATGATGAATTG+TGG | + | chr5.2:43160683-43160702 | MS.gene068828:intron | 40.0% | |
| GTTGAAACTTGCAACTTGGA+AGG | - | chr5.2:43161218-43161237 | None:intergenic | 40.0% | |
| TAACTGCATTGTTGATGCCT+TGG | - | chr5.2:43160128-43160147 | None:intergenic | 40.0% | |
| TACTTCGAAGAACCCAGAAT+GGG | - | chr5.2:43162029-43162048 | None:intergenic | 40.0% | |
| TAGGTGTTCCCATCTTCAAA+GGG | - | chr5.2:43161275-43161294 | None:intergenic | 40.0% | |
| TATGCAGAGCTAGATTCCTA+AGG | - | chr5.2:43160880-43160899 | None:intergenic | 40.0% | |
| TCAACTGGTGCAAACTGATA+TGG | - | chr5.2:43160466-43160485 | None:intergenic | 40.0% | |
| TGAAACTTGCAACTTGGAAG+GGG | - | chr5.2:43161216-43161235 | None:intergenic | 40.0% | |
| TGGTCCAAGACAAGACAAAA+AGG | - | chr5.2:43161987-43162006 | None:intergenic | 40.0% | |
| TTGAAGGGGCTGTATATGTA+TGG | + | chr5.2:43159674-43159693 | MS.gene068828:CDS | 40.0% | |
| TTGGCCAATCAAGCTATTGA+AGG | - | chr5.2:43161101-43161120 | None:intergenic | 40.0% | |
| TTGGTCAAATCTGCGCAAAA+GGG | + | chr5.2:43163752-43163771 | MS.gene068828:CDS | 40.0% | |
| TTGTTCTTACAAAGGGGGTT+CGG | - | chr5.2:43161458-43161477 | None:intergenic | 40.0% | |
| ! | AAAACAAAAGTTCTGGTGGG+CGG | + | chr5.2:43160428-43160447 | MS.gene068828:intron | 40.0% |
| ! | AAATTTCTACTGTGGCTTGG+AGG | - | chr5.2:43161024-43161043 | None:intergenic | 40.0% |
| ! | ATTCTGAAGAAGCGACCATT+GGG | + | chr5.2:43162153-43162172 | MS.gene068828:intron | 40.0% |
| ! | CCACAAAACAAAAGTTCTGG+TGG | + | chr5.2:43160424-43160443 | MS.gene068828:intron | 40.0% |
| ! | GAGGTACCATTTCTTGTAGT+TGG | - | chr5.2:43163864-43163883 | None:intergenic | 40.0% |
| ! | GATAGGTTTCCCTTTGAAGA+TGG | + | chr5.2:43161263-43161282 | MS.gene068828:intron | 40.0% |
| ! | TATTCTGAAGAAGCGACCAT+TGG | + | chr5.2:43162152-43162171 | MS.gene068828:intron | 40.0% |
| !! | ACTGATGTGTTTCTGGAGAT+AGG | + | chr5.2:43161910-43161929 | MS.gene068828:CDS | 40.0% |
| !! | AGAAGAGTACTTATCCCCAA+TGG | - | chr5.2:43162171-43162190 | None:intergenic | 40.0% |
| !! | ATCTTTGAGACATGGCACAT+TGG | - | chr5.2:43161318-43161337 | None:intergenic | 40.0% |
| !! | ATGGAAATTGGCTTTCAGTG+TGG | + | chr5.2:43161554-43161573 | MS.gene068828:intron | 40.0% |
| !! | CCTTCTGACTATAATGGACA+GGG | - | chr5.2:43161191-43161210 | None:intergenic | 40.0% |
| !! | TTTTGCTGCTTCAAACTGAG+AGG | + | chr5.2:43162954-43162973 | MS.gene068828:intron | 40.0% |
| !!! | ACAGCTCTAGCGTTACTTTT+GGG | - | chr5.2:43163539-43163558 | None:intergenic | 40.0% |
| !!! | CCACCAGAACTTTTGTTTTG+TGG | - | chr5.2:43160427-43160446 | None:intergenic | 40.0% |
| AGAAGGGTTACAAGATTGGG+AGG | + | chr5.2:43159967-43159986 | MS.gene068828:intron | 45.0% | |
| ATATGGTTCCTTGGACCACA+AGG | - | chr5.2:43160222-43160241 | None:intergenic | 45.0% | |
| ATCTCTCTGATGAGCTATGG+TGG | - | chr5.2:43160090-43160109 | None:intergenic | 45.0% | |
| CATTTGGCAGTTAGGCTAAG+AGG | + | chr5.2:43163024-43163043 | MS.gene068828:intron | 45.0% | |
| CCCCCTTTGTAAGAACAAAG+TGG | + | chr5.2:43161460-43161479 | MS.gene068828:intron | 45.0% | |
| CCCTGTCCATTATAGTCAGA+AGG | + | chr5.2:43161188-43161207 | MS.gene068828:intron | 45.0% | |
| CTAGGTGTTCCCATCTTCAA+AGG | - | chr5.2:43161276-43161295 | None:intergenic | 45.0% | |
| CTGCTATGTTGCACCTATGT+TGG | - | chr5.2:43160937-43160956 | None:intergenic | 45.0% | |
| GAAATTGGACAAGCATCTGG+TGG | + | chr5.2:43163636-43163655 | MS.gene068828:CDS | 45.0% | |
| GCAAGGGCTGGAATAACTTA+TGG | - | chr5.2:43160393-43160412 | None:intergenic | 45.0% | |
| GCAATGTCCATATGGTTCCT+TGG | - | chr5.2:43160333-43160352 | None:intergenic | 45.0% | |
| GCTAAGCTCCCTTCATTAAG+TGG | + | chr5.2:43160986-43161005 | MS.gene068828:intron | 45.0% | |
| GCTAATGCTACCTGGAACAT+AGG | - | chr5.2:43160783-43160802 | None:intergenic | 45.0% | |
| GGCCTTTAGCAATGTCCATA+TGG | - | chr5.2:43160341-43160360 | None:intergenic | 45.0% | |
| GTACTTCGAAGAACCCAGAA+TGG | - | chr5.2:43162030-43162049 | None:intergenic | 45.0% | |
| GTTGGTCAAATCTGCGCAAA+AGG | + | chr5.2:43163751-43163770 | MS.gene068828:CDS | 45.0% | |
| TCGGTAAGTGCAAATGTGGA+AGG | - | chr5.2:43161439-43161458 | None:intergenic | 45.0% | |
| TCTGGGTTCTTCGAAGTACA+AGG | + | chr5.2:43162031-43162050 | MS.gene068828:CDS | 45.0% | |
| TGATTCTGCACCGCTGTATA+TGG | - | chr5.2:43161944-43161963 | None:intergenic | 45.0% | |
| TTGTGGTCCAAGGAACCATA+TGG | + | chr5.2:43160221-43160240 | MS.gene068828:intron | 45.0% | |
| ! | AGTTTAGGGCTTGATCAGAG+AGG | + | chr5.2:43161674-43161693 | MS.gene068828:intron | 45.0% |
| ! | GCACTCAGGTTTGTTCGAAT+TGG | + | chr5.2:43161859-43161878 | MS.gene068828:intron | 45.0% |
| ! | TATTTGGCCGTGGAAGCTTT+TGG | - | chr5.2:43161592-43161611 | None:intergenic | 45.0% |
| ! | TTCTGAAGAAGCGACCATTG+GGG | + | chr5.2:43162154-43162173 | MS.gene068828:intron | 45.0% |
| ! | TTGGCTTTCAGTGTGGATTC+CGG | + | chr5.2:43161561-43161580 | MS.gene068828:intron | 45.0% |
| !! | CCCTTCTGACTATAATGGAC+AGG | - | chr5.2:43161192-43161211 | None:intergenic | 45.0% |
| !! | GACAGCTCTAGCGTTACTTT+TGG | - | chr5.2:43163540-43163559 | None:intergenic | 45.0% |
| !! | GAGATTTTTCTAGCAAGGGC+TGG | - | chr5.2:43160405-43160424 | None:intergenic | 45.0% |
| !! | GTGGAAATTGGCTTTCATGG+AGG | + | chr5.2:43161479-43161498 | MS.gene068828:intron | 45.0% |
| !! | TATAATGGACAGGGTACAGC+TGG | - | chr5.2:43161182-43161201 | None:intergenic | 45.0% |
| !!! | AAATATTTTTGGGTCGGGCC+AGG | + | chr5.2:43159469-43159488 | MS.gene068828:CDS | 45.0% |
| !!! | AATATTTTTGGGTCGGGCCA+GGG | + | chr5.2:43159470-43159489 | MS.gene068828:CDS | 45.0% |
| ACACATCAGTAGCGTCGTGA+AGG | - | chr5.2:43161900-43161919 | None:intergenic | 50.0% | |
| ATTGTGGCCATGCTTAGCCA+AGG | + | chr5.2:43160108-43160127 | MS.gene068828:intron | 50.0% | |
| CACATCAGTAGCGTCGTGAA+GGG | - | chr5.2:43161899-43161918 | None:intergenic | 50.0% | |
| CCAACAGAACGCAGCGATTT+CGG | + | chr5.2:43161702-43161721 | MS.gene068828:intron | 50.0% | |
| CCATCTCCATGCAATTGCTC+CGG | + | chr5.2:43160191-43160210 | MS.gene068828:intron | 50.0% | |
| CGACGCTACTGATGTGTTTC+TGG | + | chr5.2:43161903-43161922 | MS.gene068828:CDS | 50.0% | |
| CTGATGCTTCGGATGCTTGT+TGG | + | chr5.2:43163733-43163752 | MS.gene068828:CDS | 50.0% | |
| CTGCTTCAAACTGAGAGGTC+AGG | + | chr5.2:43162959-43162978 | MS.gene068828:intron | 50.0% | |
| GCTACCTGGAACATAGGTGA+AGG | - | chr5.2:43160777-43160796 | None:intergenic | 50.0% | |
| GGGCTGTATATGTATGGTGC+TGG | + | chr5.2:43159680-43159699 | MS.gene068828:CDS | 50.0% | |
| GGGGTCCCTTCTGACTATAA+TGG | - | chr5.2:43161197-43161216 | None:intergenic | 50.0% | |
| GTTGATGCCTTGGCTAAGCA+TGG | - | chr5.2:43160118-43160137 | None:intergenic | 50.0% | |
| TCTGGCCATATCTGATTCCC+TGG | - | chr5.2:43159490-43159509 | None:intergenic | 50.0% | |
| ! | GGGTTCGGTAAGTGCAAATG+TGG | - | chr5.2:43161443-43161462 | None:intergenic | 50.0% |
| !! | ATTGGTGGGTGCTGATGCTT+CGG | + | chr5.2:43163722-43163741 | MS.gene068828:CDS | 50.0% |
| ATTGCTCCGGCGATTCCTTG+TGG | + | chr5.2:43160204-43160223 | MS.gene068828:intron | 55.0% | |
| CCGAAATCGCTGCGTTCTGT+TGG | - | chr5.2:43161705-43161724 | None:intergenic | 55.0% | |
| CCGGAGCAATTGCATGGAGA+TGG | - | chr5.2:43160194-43160213 | None:intergenic | 55.0% | |
| CTTGGACCACAAGGAATCGC+CGG | - | chr5.2:43160213-43160232 | None:intergenic | 55.0% | |
| GAATCGCCGGAGCAATTGCA+TGG | - | chr5.2:43160200-43160219 | None:intergenic | 55.0% | |
| GCTGTGAAGACGTTTGCGCA+TGG | - | chr5.2:43161530-43161549 | None:intergenic | 55.0% | |
| GCTTTCAGTGTGGATTCCGG+CGG | + | chr5.2:43161564-43161583 | MS.gene068828:intron | 55.0% | |
| TCGGGCCAGGGAATCAGATA+TGG | + | chr5.2:43159482-43159501 | MS.gene068828:CDS | 55.0% | |
| CGGCGATTCCTTGTGGTCCA+AGG | + | chr5.2:43160211-43160230 | MS.gene068828:intron | 60.0% | |
| GGCGGAGCCAAAAGCTTCCA+CGG | + | chr5.2:43161582-43161601 | MS.gene068828:intron | 60.0% | |
| !!! | GTGGAAGCTTTTGGCTCCGC+CGG | - | chr5.2:43161583-43161602 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 43159292 | 43163892 | 43159292 | ID=MS.gene068828 |
| chr5.2 | mRNA | 43159292 | 43163892 | 43159292 | ID=MS.gene068828.t1;Parent=MS.gene068828 |
| chr5.2 | exon | 43159292 | 43159521 | 43159292 | ID=MS.gene068828.t1.exon1;Parent=MS.gene068828.t1 |
| chr5.2 | CDS | 43159292 | 43159521 | 43159292 | ID=cds.MS.gene068828.t1;Parent=MS.gene068828.t1 |
| chr5.2 | exon | 43159667 | 43159822 | 43159667 | ID=MS.gene068828.t1.exon2;Parent=MS.gene068828.t1 |
| chr5.2 | CDS | 43159667 | 43159822 | 43159667 | ID=cds.MS.gene068828.t1;Parent=MS.gene068828.t1 |
| chr5.2 | exon | 43161867 | 43162052 | 43161867 | ID=MS.gene068828.t1.exon3;Parent=MS.gene068828.t1 |
| chr5.2 | CDS | 43161867 | 43162052 | 43161867 | ID=cds.MS.gene068828.t1;Parent=MS.gene068828.t1 |
| chr5.2 | exon | 43163615 | 43163799 | 43163615 | ID=MS.gene068828.t1.exon4;Parent=MS.gene068828.t1 |
| chr5.2 | CDS | 43163615 | 43163799 | 43163615 | ID=cds.MS.gene068828.t1;Parent=MS.gene068828.t1 |
| chr5.2 | exon | 43163858 | 43163892 | 43163858 | ID=MS.gene068828.t1.exon5;Parent=MS.gene068828.t1 |
| chr5.2 | CDS | 43163858 | 43163892 | 43163858 | ID=cds.MS.gene068828.t1;Parent=MS.gene068828.t1 |
| Gene Sequence |
| Protein sequence |
