Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068835.t1 | XP_013459731.1 | 97.4 | 530 | 14 | 0 | 1 | 530 | 1 | 530 | 1.70E-300 | 1041.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068835.t1 | Q8L4B0 | 58.5 | 544 | 206 | 7 | 1 | 529 | 1 | 539 | 3.5e-166 | 586.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068835.t1 | A0A072UVY1 | 97.4 | 530 | 14 | 0 | 1 | 530 | 1 | 530 | 1.2e-300 | 1041.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene97568 | MS.gene068835 | PPI |
MS.gene021843 | MS.gene068835 | PPI |
MS.gene031140 | MS.gene068835 | PPI |
MS.gene068835 | MS.gene86088 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068835.t1 | MTR_3g452360 | 98.679 | 530 | 7 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1089 |
MS.gene068835.t1 | MTR_3g452360 | 98.688 | 381 | 5 | 0 | 150 | 530 | 1 | 381 | 0.0 | 793 |
MS.gene068835.t1 | MTR_7g012370 | 45.842 | 493 | 248 | 5 | 40 | 516 | 34 | 523 | 7.67e-149 | 438 |
MS.gene068835.t1 | MTR_6g013840 | 46.215 | 502 | 251 | 5 | 44 | 529 | 33 | 531 | 7.13e-144 | 425 |
MS.gene068835.t1 | MTR_2g082650 | 41.316 | 547 | 285 | 8 | 1 | 528 | 10 | 539 | 2.96e-135 | 403 |
MS.gene068835.t1 | MTR_2g082650 | 47.525 | 404 | 199 | 2 | 135 | 528 | 10 | 410 | 8.15e-134 | 395 |
MS.gene068835.t1 | MTR_4g133570 | 47.328 | 393 | 192 | 3 | 147 | 528 | 74 | 462 | 1.66e-119 | 360 |
MS.gene068835.t1 | MTR_7g012370 | 45.610 | 410 | 207 | 4 | 40 | 433 | 34 | 443 | 1.40e-118 | 357 |
MS.gene068835.t1 | MTR_2g027740 | 38.182 | 440 | 249 | 10 | 96 | 528 | 242 | 665 | 1.82e-96 | 306 |
MS.gene068835.t1 | MTR_2g015550 | 37.717 | 403 | 236 | 6 | 126 | 526 | 141 | 530 | 7.42e-95 | 298 |
MS.gene068835.t1 | MTR_8g092000 | 37.585 | 439 | 250 | 12 | 96 | 528 | 158 | 578 | 1.23e-92 | 294 |
MS.gene068835.t1 | MTR_3g107930 | 38.579 | 394 | 218 | 7 | 142 | 528 | 210 | 586 | 5.75e-89 | 285 |
MS.gene068835.t1 | MTR_7g075840 | 38.393 | 448 | 239 | 12 | 96 | 528 | 237 | 662 | 2.50e-88 | 285 |
MS.gene068835.t1 | MTR_4g109890 | 36.721 | 433 | 248 | 12 | 102 | 526 | 118 | 532 | 3.88e-88 | 281 |
MS.gene068835.t1 | MTR_3g107930 | 38.579 | 394 | 218 | 7 | 142 | 528 | 287 | 663 | 4.74e-88 | 285 |
MS.gene068835.t1 | MTR_2g461670 | 36.552 | 435 | 250 | 11 | 102 | 528 | 173 | 589 | 7.13e-85 | 274 |
MS.gene068835.t1 | MTR_7g055600 | 38.776 | 392 | 217 | 7 | 142 | 526 | 55 | 430 | 3.22e-84 | 268 |
MS.gene068835.t1 | MTR_7g057530 | 38.776 | 392 | 217 | 7 | 142 | 526 | 55 | 430 | 3.22e-84 | 268 |
MS.gene068835.t1 | MTR_8g033360 | 38.420 | 367 | 202 | 7 | 135 | 494 | 248 | 597 | 1.32e-78 | 261 |
MS.gene068835.t1 | MTR_6g016380 | 37.405 | 393 | 220 | 10 | 142 | 526 | 177 | 551 | 4.07e-78 | 256 |
MS.gene068835.t1 | MTR_2g006790 | 34.328 | 402 | 227 | 7 | 126 | 526 | 141 | 506 | 6.92e-78 | 254 |
MS.gene068835.t1 | MTR_7g096160 | 33.249 | 394 | 229 | 5 | 135 | 528 | 293 | 652 | 4.64e-72 | 242 |
MS.gene068835.t1 | MTR_1g070490 | 32.134 | 389 | 232 | 5 | 138 | 526 | 239 | 595 | 1.15e-57 | 202 |
MS.gene068835.t1 | MTR_7g074680 | 30.155 | 388 | 244 | 7 | 142 | 528 | 202 | 563 | 5.47e-52 | 186 |
MS.gene068835.t1 | MTR_7g074680 | 30.155 | 388 | 244 | 7 | 142 | 528 | 242 | 603 | 5.85e-52 | 187 |
MS.gene068835.t1 | MTR_7g074680 | 30.155 | 388 | 244 | 7 | 142 | 528 | 262 | 623 | 7.95e-52 | 187 |
MS.gene068835.t1 | MTR_7g074680 | 30.155 | 388 | 244 | 7 | 142 | 528 | 262 | 623 | 1.11e-51 | 186 |
MS.gene068835.t1 | MTR_7g074680 | 30.155 | 388 | 244 | 7 | 142 | 528 | 299 | 660 | 1.41e-51 | 187 |
MS.gene068835.t1 | MTR_7g074680 | 30.155 | 388 | 244 | 7 | 142 | 528 | 282 | 643 | 1.81e-51 | 186 |
MS.gene068835.t1 | MTR_4g133942 | 34.434 | 212 | 95 | 6 | 322 | 528 | 160 | 332 | 5.85e-29 | 117 |
MS.gene068835.t1 | MTR_4g118030 | 29.319 | 191 | 109 | 7 | 324 | 503 | 145 | 320 | 5.41e-22 | 97.8 |
MS.gene068835.t1 | MTR_3g092310 | 28.241 | 216 | 127 | 8 | 300 | 503 | 115 | 314 | 3.01e-20 | 92.4 |
MS.gene068835.t1 | MTR_7g094230 | 26.500 | 200 | 120 | 7 | 315 | 503 | 142 | 325 | 1.54e-18 | 87.4 |
MS.gene068835.t1 | MTR_7g109210 | 28.191 | 188 | 108 | 7 | 324 | 500 | 159 | 330 | 1.81e-17 | 84.3 |
MS.gene068835.t1 | MTR_5g036580 | 24.516 | 310 | 177 | 11 | 208 | 503 | 75 | 341 | 6.32e-16 | 80.1 |
MS.gene068835.t1 | MTR_1g021855 | 22.259 | 301 | 178 | 9 | 214 | 503 | 86 | 341 | 1.03e-14 | 76.3 |
MS.gene068835.t1 | MTR_1g089820 | 28.272 | 191 | 110 | 7 | 324 | 503 | 154 | 328 | 1.48e-14 | 75.5 |
MS.gene068835.t1 | MTR_6g008900 | 28.796 | 191 | 124 | 6 | 315 | 500 | 156 | 339 | 2.49e-14 | 75.1 |
MS.gene068835.t1 | MTR_4g071620 | 28.796 | 191 | 124 | 6 | 315 | 500 | 156 | 339 | 2.49e-14 | 75.1 |
MS.gene068835.t1 | MTR_8g078240 | 26.943 | 193 | 113 | 7 | 324 | 503 | 142 | 319 | 2.95e-14 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068835.t1 | AT3G58790 | 59.817 | 545 | 199 | 7 | 1 | 530 | 1 | 540 | 0.0 | 642 |
MS.gene068835.t1 | AT3G58790 | 63.300 | 406 | 139 | 2 | 133 | 530 | 5 | 408 | 0.0 | 545 |
MS.gene068835.t1 | AT5G15470 | 46.047 | 506 | 254 | 5 | 40 | 529 | 29 | 531 | 4.07e-151 | 443 |
MS.gene068835.t1 | AT3G01040 | 45.850 | 506 | 255 | 5 | 40 | 529 | 29 | 531 | 2.00e-149 | 439 |
MS.gene068835.t1 | AT3G01040 | 45.850 | 506 | 255 | 5 | 40 | 529 | 29 | 531 | 2.00e-149 | 439 |
MS.gene068835.t1 | AT5G54690 | 41.423 | 548 | 285 | 8 | 1 | 528 | 1 | 532 | 9.75e-133 | 396 |
MS.gene068835.t1 | AT3G01040 | 43.145 | 496 | 250 | 5 | 40 | 529 | 29 | 498 | 2.54e-131 | 391 |
MS.gene068835.t1 | AT5G47780 | 39.318 | 440 | 244 | 10 | 96 | 528 | 191 | 614 | 1.74e-100 | 316 |
MS.gene068835.t1 | AT3G61130 | 38.025 | 405 | 234 | 5 | 126 | 528 | 282 | 671 | 2.11e-95 | 304 |
MS.gene068835.t1 | AT4G38270 | 39.055 | 402 | 223 | 7 | 135 | 528 | 287 | 674 | 2.32e-92 | 296 |
MS.gene068835.t1 | AT4G38270 | 39.055 | 402 | 223 | 7 | 135 | 528 | 291 | 678 | 2.89e-92 | 296 |
MS.gene068835.t1 | AT1G18580 | 37.688 | 398 | 226 | 8 | 135 | 526 | 153 | 534 | 2.11e-91 | 290 |
MS.gene068835.t1 | AT3G25140 | 39.043 | 397 | 209 | 7 | 142 | 526 | 180 | 555 | 5.27e-91 | 290 |
MS.gene068835.t1 | AT2G20810 | 38.424 | 406 | 231 | 8 | 126 | 526 | 142 | 533 | 1.01e-81 | 265 |
MS.gene068835.t1 | AT2G46480 | 37.913 | 393 | 224 | 6 | 142 | 529 | 162 | 539 | 1.08e-79 | 259 |
MS.gene068835.t1 | AT2G46480 | 37.913 | 393 | 224 | 6 | 142 | 529 | 175 | 552 | 1.49e-79 | 259 |
MS.gene068835.t1 | AT3G02350 | 39.231 | 390 | 217 | 7 | 142 | 526 | 183 | 557 | 6.13e-76 | 250 |
MS.gene068835.t1 | AT2G46480 | 35.369 | 393 | 209 | 6 | 142 | 529 | 162 | 514 | 1.90e-71 | 237 |
MS.gene068835.t1 | AT2G46480 | 35.369 | 393 | 209 | 6 | 142 | 529 | 175 | 527 | 3.16e-71 | 237 |
MS.gene068835.t1 | AT2G30575 | 35.025 | 394 | 217 | 9 | 138 | 528 | 251 | 608 | 1.31e-70 | 237 |
MS.gene068835.t1 | AT1G06780 | 32.029 | 409 | 238 | 7 | 124 | 528 | 215 | 587 | 4.69e-66 | 224 |
MS.gene068835.t1 | AT1G06780 | 32.029 | 409 | 238 | 7 | 124 | 528 | 228 | 600 | 5.55e-66 | 224 |
MS.gene068835.t1 | AT2G38650 | 32.398 | 392 | 225 | 8 | 142 | 528 | 261 | 617 | 2.70e-54 | 193 |
MS.gene068835.t1 | AT2G38650 | 32.398 | 392 | 225 | 8 | 142 | 528 | 261 | 617 | 2.70e-54 | 193 |
MS.gene068835.t1 | AT2G38650 | 32.997 | 297 | 163 | 6 | 142 | 433 | 261 | 526 | 3.36e-34 | 136 |
MS.gene068835.t1 | AT3G62660 | 25.240 | 313 | 172 | 13 | 204 | 503 | 75 | 338 | 5.27e-20 | 92.0 |
MS.gene068835.t1 | AT4G02130 | 24.841 | 314 | 171 | 12 | 206 | 503 | 60 | 324 | 8.47e-20 | 91.3 |
MS.gene068835.t1 | AT4G02130 | 24.841 | 314 | 171 | 12 | 206 | 503 | 60 | 324 | 8.47e-20 | 91.3 |
MS.gene068835.t1 | AT4G02130 | 24.841 | 314 | 171 | 12 | 206 | 503 | 60 | 324 | 8.47e-20 | 91.3 |
MS.gene068835.t1 | AT3G06260 | 25.701 | 214 | 131 | 8 | 302 | 503 | 127 | 324 | 1.41e-17 | 84.7 |
MS.gene068835.t1 | AT1G02720 | 24.281 | 313 | 178 | 11 | 204 | 503 | 73 | 339 | 5.25e-17 | 83.2 |
MS.gene068835.t1 | AT1G02720 | 24.281 | 313 | 178 | 11 | 204 | 503 | 73 | 339 | 5.25e-17 | 83.2 |
MS.gene068835.t1 | AT3G28340 | 24.667 | 300 | 187 | 9 | 208 | 503 | 67 | 331 | 9.44e-17 | 82.4 |
MS.gene068835.t1 | AT1G70090 | 26.364 | 220 | 134 | 8 | 296 | 503 | 141 | 344 | 1.29e-16 | 82.4 |
MS.gene068835.t1 | AT1G70090 | 26.364 | 220 | 134 | 8 | 296 | 503 | 141 | 344 | 1.29e-16 | 82.4 |
MS.gene068835.t1 | AT1G24170 | 22.830 | 311 | 183 | 11 | 207 | 503 | 80 | 347 | 3.10e-15 | 78.2 |
MS.gene068835.t1 | AT1G13250 | 23.642 | 313 | 172 | 11 | 208 | 503 | 56 | 318 | 1.49e-14 | 75.5 |
Find 124 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAATGCTTGTGACTGATTT+AGG | 0.165480 | 3.2:+41084673 | MS.gene068835:CDS |
TGGAAACTAATCACTTAATT+TGG | 0.212659 | 3.2:+41083475 | MS.gene068835:CDS |
GCAAAACCATGGCTTGAAAT+TGG | 0.226164 | 3.2:+41084769 | MS.gene068835:CDS |
TCCCAGAGTATCGAAGTTTA+TGG | 0.233325 | 3.2:+41084794 | MS.gene068835:CDS |
CCTTCCTTGATTGCATTTGA+TGG | 0.254254 | 3.2:+41084628 | MS.gene068835:CDS |
TTGTGGGACGTAGATCTTAA+TGG | 0.263561 | 3.2:+41083781 | MS.gene068835:CDS |
TTCACTCCGGACTGTGCTTC+CGG | 0.289914 | 3.2:+41078666 | MS.gene068835:CDS |
ATAGTAATTTGAACGCTTTA+CGG | 0.297616 | 3.2:+41083532 | MS.gene068835:CDS |
ATACGGAGATGTAGAATTAT+AGG | 0.310252 | 3.2:+41084847 | MS.gene068835:CDS |
TGAATTTGCTTCTCGCCTTT+CGG | 0.325102 | 3.2:+41083203 | MS.gene068835:CDS |
AACAGCAGGAGTCAGTTTAT+TGG | 0.339669 | 3.2:+41083076 | MS.gene068835:CDS |
TTACAAGTTTCAACCATTTC+CGG | 0.340859 | 3.2:-41083996 | None:intergenic |
ATCAGCTGTTGTTGAAGTTA+AGG | 0.348935 | 3.2:+41083398 | MS.gene068835:CDS |
TAGTTCATGTATTTACTTCC+AGG | 0.352997 | 3.2:-41083853 | None:intergenic |
GACAAAGACAGTGTAAACTA+TGG | 0.359297 | 3.2:-41083122 | None:intergenic |
TTTCTTCAGACCAATCATAT+TGG | 0.366193 | 3.2:-41083428 | None:intergenic |
TACGGAGATGTAGAATTATA+GGG | 0.369509 | 3.2:+41084848 | MS.gene068835:CDS |
CCCAGAGTATCGAAGTTTAT+GGG | 0.373450 | 3.2:+41084795 | MS.gene068835:CDS |
AAATCAGTCACAAGCATTGA+TGG | 0.380994 | 3.2:-41084670 | None:intergenic |
ACTTCTCTAATAAGTTTATA+CGG | 0.382222 | 3.2:+41084830 | MS.gene068835:CDS |
ACTCTCCTTGCTAATTTCTT+CGG | 0.388314 | 3.2:-41084710 | None:intergenic |
TCAGCTGTTGTTGAAGTTAA+GGG | 0.393864 | 3.2:+41083399 | MS.gene068835:CDS |
AACAGCTGATTCAACAGAAT+TGG | 0.397737 | 3.2:-41083385 | None:intergenic |
TGAGCTAACCAGAGCGCTAA+TGG | 0.406725 | 3.2:+41082073 | MS.gene068835:CDS |
CCCCATAAACTTCGATACTC+TGG | 0.408924 | 3.2:-41084796 | None:intergenic |
AAAATTATATACCATGGCTT+TGG | 0.409211 | 3.2:-41082201 | None:intergenic |
GTTTCACAGAACCTCAAGTC+TGG | 0.411046 | 3.2:+41084574 | MS.gene068835:intron |
GAACAATGTGGGTGGCTCTA+TGG | 0.411219 | 3.2:+41083919 | MS.gene068835:CDS |
GAAAGGCGAGAAGCAAATTC+AGG | 0.414073 | 3.2:-41083201 | None:intergenic |
TAACAGAGACCTACCGGAAA+TGG | 0.427059 | 3.2:+41083983 | MS.gene068835:CDS |
CTTCCGGTGGTGTTAGTGCT+TGG | 0.432041 | 3.2:+41078682 | MS.gene068835:CDS |
ACATGACATATCTTCTTTGT+GGG | 0.432071 | 3.2:+41083765 | MS.gene068835:CDS |
TCTTGAAAGCAAAAGCTTTG+AGG | 0.433058 | 3.2:-41082178 | None:intergenic |
AGGGATTGCACCAATATGAT+TGG | 0.438241 | 3.2:+41083418 | MS.gene068835:CDS |
GTGGTTCAGTATTCAAGTCT+TGG | 0.440559 | 3.2:+41083812 | MS.gene068835:CDS |
ATTTGCTTCCATTAGCGCTC+TGG | 0.443976 | 3.2:-41082081 | None:intergenic |
CGGCAAGGACATTATCAGTT+AGG | 0.448076 | 3.2:-41083251 | None:intergenic |
ACAAGCATTGATGGATCTAT+AGG | 0.448485 | 3.2:-41084661 | None:intergenic |
AACATGACATATCTTCTTTG+TGG | 0.449268 | 3.2:+41083764 | MS.gene068835:CDS |
ACACTGTCTTTGTCTTAAGT+TGG | 0.450596 | 3.2:+41083131 | MS.gene068835:CDS |
AGAACTAGGTGATGAAGAGT+AGG | 0.452998 | 3.2:-41083228 | None:intergenic |
CCGACTGTTAGTGGTTCTTC+CGG | 0.453251 | 3.2:+41078634 | MS.gene068835:CDS |
TGTGAAGACAACTGCTGCCC+TGG | 0.455144 | 3.2:+41083835 | MS.gene068835:CDS |
TTCCGGTGGTGTTAGTGCTT+GGG | 0.465325 | 3.2:+41078683 | MS.gene068835:CDS |
CTTATGCTTCAATGCATGCT+TGG | 0.468781 | 3.2:+41083355 | MS.gene068835:CDS |
CATTATCAGTTAGGAGAACT+AGG | 0.475117 | 3.2:-41083242 | None:intergenic |
GGGACAGCACTGTGGAATCC+AGG | 0.479503 | 3.2:+41084595 | MS.gene068835:CDS |
AAGGAAGGTGGAAGAACTCC+TGG | 0.480547 | 3.2:-41084613 | None:intergenic |
GGCAATATTAATGATAATGA+AGG | 0.483101 | 3.2:+41082107 | MS.gene068835:CDS |
GCACAGTCCGGAGTGAAATC+CGG | 0.484080 | 3.2:-41078660 | None:intergenic |
AAGGATACAACGACGACGGC+GGG | 0.486134 | 3.2:+41078601 | MS.gene068835:CDS |
TTGCAGAATGTGCTGGGTGG+AGG | 0.498368 | 3.2:+41079352 | MS.gene068835:intron |
TGCTGGTGTTAAAGAGATGC+TGG | 0.500875 | 3.2:+41083455 | MS.gene068835:CDS |
AGTAACAATATCAAACGGTA+AGG | 0.504916 | 3.2:+41078570 | MS.gene068835:CDS |
GGAGAGTCTAGAAGCTGCTT+CGG | 0.505777 | 3.2:+41084726 | MS.gene068835:CDS |
GGAGGAAGTCCGACTGTTAG+TGG | 0.507681 | 3.2:+41078625 | MS.gene068835:CDS |
CCCATAAACTTCGATACTCT+GGG | 0.507749 | 3.2:-41084795 | None:intergenic |
GGGAAACCAATTTCAAGCCA+TGG | 0.508346 | 3.2:-41084775 | None:intergenic |
ATGACTGTTGCAGAATGTGC+TGG | 0.512673 | 3.2:+41079345 | MS.gene068835:intron |
ACAAAGACAGTGTAAACTAT+GGG | 0.516741 | 3.2:-41083121 | None:intergenic |
TTGGCCATCAAATGCAATCA+AGG | 0.517676 | 3.2:-41084632 | None:intergenic |
AGCTGATTCAACAGAATTGG+TGG | 0.518950 | 3.2:-41083382 | None:intergenic |
TTAGTGGTTCTTCCGGTCGC+CGG | 0.519889 | 3.2:+41078641 | MS.gene068835:CDS |
CAGGCATATAAATGCGGAGT+TGG | 0.529878 | 3.2:-41083578 | None:intergenic |
AAGCAAATTCAGGAGGAGGC+AGG | 0.530020 | 3.2:-41083191 | None:intergenic |
ACAACGACGACGGCGGGAGG+AGG | 0.530837 | 3.2:+41078607 | MS.gene068835:CDS |
CCGGAGTGAAATCCGGCGAC+CGG | 0.533686 | 3.2:-41078653 | None:intergenic |
AAACGGTAAGGGATCGGCGA+AGG | 0.543149 | 3.2:+41078582 | MS.gene068835:CDS |
TGCTTTCAAGACCAAAGCCA+TGG | 0.552072 | 3.2:+41082190 | MS.gene068835:CDS |
GCGCTAATGGAAGCAAATGA+TGG | 0.552348 | 3.2:+41082086 | MS.gene068835:CDS |
GCTTCGGTTATCCATTTCAG+TGG | 0.552617 | 3.2:+41084742 | MS.gene068835:CDS |
AGTTCATGTATTTACTTCCA+GGG | 0.552622 | 3.2:-41083852 | None:intergenic |
CAGTGGAGCTGACACGTCAC+TGG | 0.553124 | 3.2:+41079380 | MS.gene068835:CDS |
CGAGAAGCAAATTCAGGAGG+AGG | 0.553843 | 3.2:-41083195 | None:intergenic |
ACACCACCGGAAGCACAGTC+CGG | 0.557270 | 3.2:-41078672 | None:intergenic |
AAACGAGTAACAATATCAAA+CGG | 0.560338 | 3.2:+41078565 | MS.gene068835:CDS |
ATGGATCTATAGGATGTACT+TGG | 0.564930 | 3.2:-41084651 | None:intergenic |
CCGGTCGCCGGATTTCACTC+CGG | 0.568175 | 3.2:+41078653 | MS.gene068835:CDS |
AATATCAAACGGTAAGGGAT+CGG | 0.573049 | 3.2:+41078576 | MS.gene068835:CDS |
ACAGTGCTGTCCCAGACTTG+AGG | 0.575252 | 3.2:-41084585 | None:intergenic |
GAAGGATACAACGACGACGG+CGG | 0.588046 | 3.2:+41078600 | MS.gene068835:CDS |
ATGTATTAGATCTTGATGCT+TGG | 0.588082 | 3.2:+41083947 | MS.gene068835:CDS |
ACTCCGGACTGTGCTTCCGG+TGG | 0.589721 | 3.2:+41078669 | MS.gene068835:CDS |
CAATGAACTTGTGAAAGAGA+TGG | 0.591189 | 3.2:+41082142 | MS.gene068835:CDS |
GGAGTTGGTTCATCAAAGAA+AGG | 0.592445 | 3.2:-41083563 | None:intergenic |
GATACAACGACGACGGCGGG+AGG | 0.592633 | 3.2:+41078604 | MS.gene068835:CDS |
TTTCACAGAACCTCAAGTCT+GGG | 0.593577 | 3.2:+41084575 | MS.gene068835:intron |
CCAGAGTATCGAAGTTTATG+GGG | 0.594965 | 3.2:+41084796 | MS.gene068835:CDS |
CCATCAAATGCAATCAAGGA+AGG | 0.595079 | 3.2:-41084628 | None:intergenic |
CAAACATAACAGAGACCTAC+CGG | 0.596268 | 3.2:+41083977 | MS.gene068835:CDS |
GAACTAGGTGATGAAGAGTA+GGG | 0.597651 | 3.2:-41083227 | None:intergenic |
AGTTTCGACGGTGAACAATG+TGG | 0.598991 | 3.2:+41083907 | MS.gene068835:CDS |
ACATATTCAGCTATCACAGA+TGG | 0.602042 | 3.2:+41083032 | MS.gene068835:intron |
CTACAACAACAGAGGCGGCA+AGG | 0.605369 | 3.2:-41083266 | None:intergenic |
ATCCCAAGCACTAACACCAC+CGG | 0.605798 | 3.2:-41078685 | None:intergenic |
CTCATATCATCGAGTTTCGA+CGG | 0.608121 | 3.2:+41083895 | MS.gene068835:CDS |
TCAAATGCAATCAAGGAAGG+TGG | 0.610825 | 3.2:-41084625 | None:intergenic |
AAGTTTCAACCATTTCCGGT+AGG | 0.619038 | 3.2:-41083992 | None:intergenic |
GATGAAGAGTAGGGTCCGAA+AGG | 0.619172 | 3.2:-41083218 | None:intergenic |
TCAGTGGCCCTGCAAAACCA+TGG | 0.619976 | 3.2:+41084758 | MS.gene068835:CDS |
GTTTCGACGGTGAACAATGT+GGG | 0.622090 | 3.2:+41083908 | MS.gene068835:CDS |
GATCTTAATGGCAAAGTCAG+TGG | 0.623090 | 3.2:+41083793 | MS.gene068835:CDS |
AGAATATGCTGTAAATGCCA+TGG | 0.625638 | 3.2:+41083158 | MS.gene068835:CDS |
TGGTCTGAAGAAATGAATGC+TGG | 0.626137 | 3.2:+41083438 | MS.gene068835:CDS |
GGTGCAAACAGCAAAACAGC+AGG | 0.626377 | 3.2:+41083062 | MS.gene068835:CDS |
AGGCAGGCGAGATCGAGCCA+TGG | 0.627139 | 3.2:-41083175 | None:intergenic |
TTCATCAAAGAAAGGCTGCT+AGG | 0.629361 | 3.2:-41083555 | None:intergenic |
GTAACAATATCAAACGGTAA+GGG | 0.634534 | 3.2:+41078571 | MS.gene068835:CDS |
TGACTGTTGCAGAATGTGCT+GGG | 0.636790 | 3.2:+41079346 | MS.gene068835:intron |
GGAGGCTACAACAACAGAGG+CGG | 0.664388 | 3.2:-41083271 | None:intergenic |
TTACCTCAGGCATATAAATG+CGG | 0.667987 | 3.2:-41083584 | None:intergenic |
TAATTCCGAAGAAATTAGCA+AGG | 0.672624 | 3.2:+41084705 | MS.gene068835:CDS |
TCGAAACTCGATGATATGAG+AGG | 0.672946 | 3.2:-41083892 | None:intergenic |
CCGGAAGAACCACTAACAGT+CGG | 0.676034 | 3.2:-41078634 | None:intergenic |
GGCGAAGGATACAACGACGA+CGG | 0.681059 | 3.2:+41078597 | MS.gene068835:CDS |
GCTATCACAGATGGAACACA+AGG | 0.685282 | 3.2:+41083041 | MS.gene068835:intron |
TATTGGCATCTAGCATCACA+CGG | 0.686372 | 3.2:+41083093 | MS.gene068835:CDS |
TCAAGTCTGGGACAGCACTG+TGG | 0.688056 | 3.2:+41084587 | MS.gene068835:CDS |
CAAAGACAGTGTAAACTATG+GGG | 0.690274 | 3.2:-41083120 | None:intergenic |
AGGCGAGAAGCAAATTCAGG+AGG | 0.691490 | 3.2:-41083198 | None:intergenic |
TCGACGGTGAACAATGTGGG+TGG | 0.692704 | 3.2:+41083911 | MS.gene068835:CDS |
ACTCCGCATTTATATGCCTG+AGG | 0.707928 | 3.2:+41083581 | MS.gene068835:CDS |
CTGTTGCAGAATGTGCTGGG+TGG | 0.708910 | 3.2:+41079349 | MS.gene068835:intron |
CGTGGAGGCTACAACAACAG+AGG | 0.713906 | 3.2:-41083274 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATCTATATATTAAACA+TGG | + | chr3.2:41080697-41080716 | MS.gene068835:intron | 10.0% |
!! | AATATTTGTCAAAAAATTTA+AGG | + | chr3.2:41079241-41079260 | MS.gene068835:intron | 10.0% |
!! | TTTAATTAAAATATACAAGT+TGG | - | chr3.2:41081989-41082008 | None:intergenic | 10.0% |
!!! | AAATAATTTCGTTTATTTTT+AGG | + | chr3.2:41079105-41079124 | MS.gene068835:intron | 10.0% |
!!! | ATTTCATATATTTTTATTGA+AGG | + | chr3.2:41080981-41081000 | MS.gene068835:intron | 10.0% |
!!! | GTATATAATTTTTTTACTTT+TGG | + | chr3.2:41082212-41082231 | MS.gene068835:intron | 10.0% |
!!! | TTTCATATATTTTTATTGAA+GGG | + | chr3.2:41080982-41081001 | MS.gene068835:intron | 10.0% |
!!! | TTTTTAAAATTAATTTTTCG+TGG | + | chr3.2:41079199-41079218 | MS.gene068835:intron | 10.0% |
!! | AAAAAATCTATTTCAGTTAA+AGG | + | chr3.2:41081131-41081150 | MS.gene068835:intron | 15.0% |
!! | AAAAATCTATTTCAGTTAAA+GGG | + | chr3.2:41081132-41081151 | MS.gene068835:intron | 15.0% |
!! | AAACAAATCAATTACATAAA+TGG | - | chr3.2:41081687-41081706 | None:intergenic | 15.0% |
!! | AGTAAAAAAATTATATACCA+TGG | - | chr3.2:41082210-41082229 | None:intergenic | 15.0% |
!! | ATAATAATACAATGTCAAAT+TGG | + | chr3.2:41079860-41079879 | MS.gene068835:intron | 15.0% |
!! | ATATGTTAAGAAATATGAAT+AGG | + | chr3.2:41084173-41084192 | MS.gene068835:intron | 15.0% |
!! | ATTACTTATTATTCAATCAA+AGG | - | chr3.2:41083627-41083646 | None:intergenic | 15.0% |
!! | CAATTAATATAGATCAAAAT+AGG | - | chr3.2:41082559-41082578 | None:intergenic | 15.0% |
!! | TATGTTAAGAAATATGAATA+GGG | + | chr3.2:41084174-41084193 | MS.gene068835:intron | 15.0% |
!! | TTGTTAACTTAATTAATCTT+GGG | + | chr3.2:41081047-41081066 | MS.gene068835:intron | 15.0% |
!! | TTTGTTAACTTAATTAATCT+TGG | + | chr3.2:41081046-41081065 | MS.gene068835:intron | 15.0% |
!!! | ATATGAAAAACTAATTTTTG+AGG | - | chr3.2:41083318-41083337 | None:intergenic | 15.0% |
!!! | ATTTTTCTTTTACCAATTTT+TGG | - | chr3.2:41081271-41081290 | None:intergenic | 15.0% |
!!! | CTTTATTAGTTTAATTGATT+TGG | - | chr3.2:41082342-41082361 | None:intergenic | 15.0% |
!!! | GTTAAAAATTCACTTTTTTA+AGG | - | chr3.2:41079065-41079084 | None:intergenic | 15.0% |
!!! | TAAACAAAGATATTCATTTT+CGG | - | chr3.2:41082700-41082719 | None:intergenic | 15.0% |
!!! | TTATTTATTTGATAATGGTA+TGG | + | chr3.2:41084520-41084539 | MS.gene068835:intron | 15.0% |
!!! | TTTAAGGAAATTTGTTTTTA+TGG | + | chr3.2:41079257-41079276 | MS.gene068835:intron | 15.0% |
!!! | TTTTATGGAATATATGAAAT+AGG | + | chr3.2:41079272-41079291 | MS.gene068835:intron | 15.0% |
!!! | TTTTTTATCAAGTAATTTAG+TGG | - | chr3.2:41079087-41079106 | None:intergenic | 15.0% |
!! | AATATAGATCAAAATAGGAT+AGG | - | chr3.2:41082554-41082573 | None:intergenic | 20.0% |
!! | ACATTGTATAAAAAAACACT+CGG | - | chr3.2:41084139-41084158 | None:intergenic | 20.0% |
!! | ACCAAAACAAAATTAATCTT+GGG | + | chr3.2:41081079-41081098 | MS.gene068835:intron | 20.0% |
!! | ACTATCAAAATTGATTGAAT+TGG | - | chr3.2:41081879-41081898 | None:intergenic | 20.0% |
!! | ACTTCTCTAATAAGTTTATA+CGG | + | chr3.2:41084830-41084849 | MS.gene068835:CDS | 20.0% |
!! | AGATAATACTTTCCAAAAAT+TGG | + | chr3.2:41081256-41081275 | MS.gene068835:intron | 20.0% |
!! | ATTAACATTACGTATTTATC+TGG | + | chr3.2:41084552-41084571 | MS.gene068835:intron | 20.0% |
!! | ATTACATAAATGGTATTAGT+TGG | - | chr3.2:41081677-41081696 | None:intergenic | 20.0% |
!! | CAATTATTACAAATTTGTCA+TGG | + | chr3.2:41079883-41079902 | MS.gene068835:intron | 20.0% |
!! | CCATAGATTAAATTTATACA+CGG | - | chr3.2:41080622-41080641 | None:intergenic | 20.0% |
!! | CCTGTATTAATTTAAGAAAA+TGG | - | chr3.2:41082866-41082885 | None:intergenic | 20.0% |
!! | CTGCATTATTTATTTGATAA+TGG | + | chr3.2:41084515-41084534 | MS.gene068835:intron | 20.0% |
!! | TAACATCAACTTTATGATAA+AGG | - | chr3.2:41079307-41079326 | None:intergenic | 20.0% |
!! | TAATAAGAGTAAAAGACAAA+AGG | + | chr3.2:41080902-41080921 | MS.gene068835:intron | 20.0% |
!! | TGATTATTTACAATTTGTGA+AGG | + | chr3.2:41079929-41079948 | MS.gene068835:intron | 20.0% |
!! | TTAGATCAAATGACATTATA+AGG | + | chr3.2:41080181-41080200 | MS.gene068835:intron | 20.0% |
!! | TTGAATATAATATCATGTGT+CGG | - | chr3.2:41082838-41082857 | None:intergenic | 20.0% |
!!! | AATTTTGATCTATGCATAAA+TGG | + | chr3.2:41082590-41082609 | MS.gene068835:intron | 20.0% |
!!! | AATTTTTGGAAAGTATTATC+TGG | - | chr3.2:41081257-41081276 | None:intergenic | 20.0% |
!!! | AGTGTTTTTTTCACATATTA+TGG | + | chr3.2:41081340-41081359 | MS.gene068835:intron | 20.0% |
!!! | ATATATAGGTTCCATAATTT+TGG | + | chr3.2:41084438-41084457 | MS.gene068835:intron | 20.0% |
!!! | ATCTTTCTTTGTTTTACTTT+GGG | + | chr3.2:41081623-41081642 | MS.gene068835:intron | 20.0% |
!!! | CCATTTTCTTAAATTAATAC+AGG | + | chr3.2:41082863-41082882 | MS.gene068835:intron | 20.0% |
!!! | GAAATTTTTACAGTTAATGT+GGG | + | chr3.2:41078882-41078901 | MS.gene068835:intron | 20.0% |
!!! | GAGTACTGTATAATATATAT+AGG | + | chr3.2:41084424-41084443 | MS.gene068835:intron | 20.0% |
!!! | TAAGAAAGTATATTAGATGT+AGG | - | chr3.2:41080316-41080335 | None:intergenic | 20.0% |
!!! | TATATAGGTTCCATAATTTT+GGG | + | chr3.2:41084439-41084458 | MS.gene068835:intron | 20.0% |
!!! | TCTCTCTATTATTTTGATTT+TGG | - | chr3.2:41080438-41080457 | None:intergenic | 20.0% |
!!! | TTTTTATTGAAGGGATTATT+AGG | + | chr3.2:41080991-41081010 | MS.gene068835:intron | 20.0% |
!!! | TTTTTTTCACATATTATGGA+AGG | + | chr3.2:41081344-41081363 | MS.gene068835:intron | 20.0% |
! | AAAATTATATACCATGGCTT+TGG | - | chr3.2:41082204-41082223 | None:intergenic | 25.0% |
! | AAACGAGTAACAATATCAAA+CGG | + | chr3.2:41078565-41078584 | MS.gene068835:CDS | 25.0% |
! | AAGACATAATTAAGGGTAAA+TGG | + | chr3.2:41084364-41084383 | MS.gene068835:intron | 25.0% |
! | ATAAAAACAAAGAGCAGTAT+AGG | - | chr3.2:41081530-41081549 | None:intergenic | 25.0% |
! | ATAACGATCATAATCAGAAT+AGG | - | chr3.2:41082641-41082660 | None:intergenic | 25.0% |
! | ATAAGAATTTAAACCTTTGC+TGG | - | chr3.2:41084108-41084127 | None:intergenic | 25.0% |
! | ATAGTAATTTGAACGCTTTA+CGG | + | chr3.2:41083532-41083551 | MS.gene068835:CDS | 25.0% |
! | ATATTGCGTTATATATGCAA+AGG | + | chr3.2:41079006-41079025 | MS.gene068835:intron | 25.0% |
! | ATTTACCCTTAATTATGTCT+TGG | - | chr3.2:41084365-41084384 | None:intergenic | 25.0% |
! | CCGTGTATAAATTTAATCTA+TGG | + | chr3.2:41080619-41080638 | MS.gene068835:intron | 25.0% |
! | CTAAAAAAAGTTTGATTGTC+TGG | + | chr3.2:41080130-41080149 | MS.gene068835:intron | 25.0% |
! | CTCTATATTTGACAAAATCA+CGG | - | chr3.2:41081856-41081875 | None:intergenic | 25.0% |
! | GACCAAAACAAAATTAATCT+TGG | + | chr3.2:41081078-41081097 | MS.gene068835:intron | 25.0% |
! | GGTTTAATCTTTATGCATAT+GGG | - | chr3.2:41084087-41084106 | None:intergenic | 25.0% |
! | GTAAACCAAGACATAATTAA+GGG | + | chr3.2:41084357-41084376 | MS.gene068835:intron | 25.0% |
! | GTGTAAAAATAGTAAATGCA+GGG | - | chr3.2:41078849-41078868 | None:intergenic | 25.0% |
! | TCTTTATACTCCTATGAAAT+TGG | + | chr3.2:41081438-41081457 | MS.gene068835:intron | 25.0% |
! | TGGAAACTAATCACTTAATT+TGG | + | chr3.2:41083475-41083494 | MS.gene068835:CDS | 25.0% |
! | TGGTTTAATCTTTATGCATA+TGG | - | chr3.2:41084088-41084107 | None:intergenic | 25.0% |
! | TTAACTTAATTAATCTTGGG+TGG | + | chr3.2:41081050-41081069 | MS.gene068835:intron | 25.0% |
! | TTAGTAAAAATGCAGATGTT+TGG | - | chr3.2:41081722-41081741 | None:intergenic | 25.0% |
!! | AAGTTTTACATATCAGCAAA+GGG | + | chr3.2:41078538-41078557 | MS.gene068835:CDS | 25.0% |
!! | ATGATTTTACAAAGGAAAAG+GGG | + | chr3.2:41080404-41080423 | MS.gene068835:intron | 25.0% |
!! | ATTCCTTATTGTTTCCTTTT+GGG | + | chr3.2:41082278-41082297 | MS.gene068835:intron | 25.0% |
!! | CATGATTTTACAAAGGAAAA+GGG | + | chr3.2:41080403-41080422 | MS.gene068835:intron | 25.0% |
!! | GGAAATTTTTACAGTTAATG+TGG | + | chr3.2:41078881-41078900 | MS.gene068835:intron | 25.0% |
!! | GGCAATATTAATGATAATGA+AGG | + | chr3.2:41082107-41082126 | MS.gene068835:CDS | 25.0% |
!! | TTAATCAACGAAGACAATTT+TGG | + | chr3.2:41081746-41081765 | MS.gene068835:intron | 25.0% |
!! | TTCTAAATAGTGTTTTGTAC+AGG | - | chr3.2:41084227-41084246 | None:intergenic | 25.0% |
!!! | AATACTATCTTTTTGAGATC+CGG | - | chr3.2:41083721-41083740 | None:intergenic | 25.0% |
!!! | AATCAAACTTTTTTTAGTGG+TGG | - | chr3.2:41080127-41080146 | None:intergenic | 25.0% |
!!! | ACCCAAGATTAATTTTGTTT+TGG | - | chr3.2:41081083-41081102 | None:intergenic | 25.0% |
!!! | ACTTTTTTAAGGTGAATAAG+TGG | - | chr3.2:41079054-41079073 | None:intergenic | 25.0% |
!!! | ATTTACTATTTTTACACGCA+AGG | + | chr3.2:41078852-41078871 | MS.gene068835:intron | 25.0% |
!!! | CATTCATTTTTTTTACCGTT+CGG | + | chr3.2:41078792-41078811 | MS.gene068835:intron | 25.0% |
!!! | CTTTTTTAAGGTGAATAAGT+GGG | - | chr3.2:41079053-41079072 | None:intergenic | 25.0% |
!!! | GACAATCAAACTTTTTTTAG+TGG | - | chr3.2:41080130-41080149 | None:intergenic | 25.0% |
!!! | GATCTTTCTTTGTTTTACTT+TGG | + | chr3.2:41081622-41081641 | MS.gene068835:intron | 25.0% |
!!! | TGAAGCATAAGTTTTTTTGT+CGG | - | chr3.2:41083346-41083365 | None:intergenic | 25.0% |
!!! | TGCAATTTGTTAACAAAACA+CGG | - | chr3.2:41079709-41079728 | None:intergenic | 25.0% |
!!! | TTAACTTCAGACTTGTTATT+AGG | - | chr3.2:41083651-41083670 | None:intergenic | 25.0% |
!!! | TTTCCACAACTACTTATTTT+TGG | + | chr3.2:41079472-41079491 | MS.gene068835:intron | 25.0% |
!!! | TTTTTTAAGGTGAATAAGTG+GGG | - | chr3.2:41079052-41079071 | None:intergenic | 25.0% |
AAATTTACTCAGTTACCGAA+CGG | - | chr3.2:41078810-41078829 | None:intergenic | 30.0% | |
AACATGACATATCTTCTTTG+TGG | + | chr3.2:41083764-41083783 | MS.gene068835:CDS | 30.0% | |
AAGAAATATGAATAGGGCTA+AGG | + | chr3.2:41084180-41084199 | MS.gene068835:intron | 30.0% | |
ACAAAGACAGTGTAAACTAT+GGG | - | chr3.2:41083124-41083143 | None:intergenic | 30.0% | |
ACATGACATATCTTCTTTGT+GGG | + | chr3.2:41083765-41083784 | MS.gene068835:CDS | 30.0% | |
ACCAAAACAACCAAAGATTT+GGG | - | chr3.2:41084339-41084358 | None:intergenic | 30.0% | |
AGATACCATAATAATGCACT+AGG | + | chr3.2:41082360-41082379 | MS.gene068835:intron | 30.0% | |
AGGATAAACAGATAACTAGA+CGG | - | chr3.2:41080296-41080315 | None:intergenic | 30.0% | |
AGTAACAATATCAAACGGTA+AGG | + | chr3.2:41078570-41078589 | MS.gene068835:CDS | 30.0% | |
AGTTCATGTATTTACTTCCA+GGG | - | chr3.2:41083855-41083874 | None:intergenic | 30.0% | |
ATACGGAGATGTAGAATTAT+AGG | + | chr3.2:41084847-41084866 | MS.gene068835:CDS | 30.0% | |
ATCATAATGTCTGATTCTTG+TGG | + | chr3.2:41079822-41079841 | MS.gene068835:intron | 30.0% | |
ATGTATTAGATCTTGATGCT+TGG | + | chr3.2:41083947-41083966 | MS.gene068835:CDS | 30.0% | |
CAAAAATAACTCATTACCTC+AGG | - | chr3.2:41083600-41083619 | None:intergenic | 30.0% | |
CATAAAGATTAAACCAGCAA+AGG | + | chr3.2:41084092-41084111 | MS.gene068835:intron | 30.0% | |
CATCAACTTTATGATAAAGG+AGG | - | chr3.2:41079304-41079323 | None:intergenic | 30.0% | |
CATGTAATTGATCAGAAATG+TGG | + | chr3.2:41082465-41082484 | MS.gene068835:intron | 30.0% | |
CGTGTAAAAATAGTAAATGC+AGG | - | chr3.2:41078850-41078869 | None:intergenic | 30.0% | |
CTACATAGTCTATGCATAAA+TGG | - | chr3.2:41082731-41082750 | None:intergenic | 30.0% | |
GATCATAATCAGAATAGGAT+AGG | - | chr3.2:41082636-41082655 | None:intergenic | 30.0% | |
GCAACTCTAACAAAAACAAA+CGG | - | chr3.2:41078718-41078737 | None:intergenic | 30.0% | |
GGTAAACCAAGACATAATTA+AGG | + | chr3.2:41084356-41084375 | MS.gene068835:intron | 30.0% | |
GTAACAATATCAAACGGTAA+GGG | + | chr3.2:41078571-41078590 | MS.gene068835:CDS | 30.0% | |
GTATAAAAAAACACTCGGAA+GGG | - | chr3.2:41084134-41084153 | None:intergenic | 30.0% | |
GTGGTTGTTAATGAAAAGAT+AGG | + | chr3.2:41079631-41079650 | MS.gene068835:intron | 30.0% | |
TAAAAATAGTAAATGCAGGG+AGG | - | chr3.2:41078846-41078865 | None:intergenic | 30.0% | |
TAATTCCGAAGAAATTAGCA+AGG | + | chr3.2:41084705-41084724 | MS.gene068835:CDS | 30.0% | |
TACAAATTTGTCATGGTTCT+GGG | + | chr3.2:41079890-41079909 | MS.gene068835:intron | 30.0% | |
TACCAAAACAACCAAAGATT+TGG | - | chr3.2:41084340-41084359 | None:intergenic | 30.0% | |
TACGGAGATGTAGAATTATA+GGG | + | chr3.2:41084848-41084867 | MS.gene068835:CDS | 30.0% | |
TAGTTCATGTATTTACTTCC+AGG | - | chr3.2:41083856-41083875 | None:intergenic | 30.0% | |
TCATAATGTCTGATTCTTGT+GGG | + | chr3.2:41079823-41079842 | MS.gene068835:intron | 30.0% | |
TGACCAAAAATAAGTAGTTG+TGG | - | chr3.2:41079478-41079497 | None:intergenic | 30.0% | |
TGTATAAAAAAACACTCGGA+AGG | - | chr3.2:41084135-41084154 | None:intergenic | 30.0% | |
TGTCATAGAATAGAAGCAAA+TGG | - | chr3.2:41081650-41081669 | None:intergenic | 30.0% | |
TTACAAATTTGTCATGGTTC+TGG | + | chr3.2:41079889-41079908 | MS.gene068835:intron | 30.0% | |
TTACAAGTTTCAACCATTTC+CGG | - | chr3.2:41083999-41084018 | None:intergenic | 30.0% | |
TTCACATATTATGGAAGGAT+TGG | + | chr3.2:41081349-41081368 | MS.gene068835:intron | 30.0% | |
TTCTGATTATGATCGTTATG+AGG | + | chr3.2:41082642-41082661 | MS.gene068835:intron | 30.0% | |
TTTCTTCAGACCAATCATAT+TGG | - | chr3.2:41083431-41083450 | None:intergenic | 30.0% | |
! | ATACCACATGTCTACATTTT+TGG | + | chr3.2:41080955-41080974 | MS.gene068835:intron | 30.0% |
! | CATTCCTTATTGTTTCCTTT+TGG | + | chr3.2:41082277-41082296 | MS.gene068835:intron | 30.0% |
! | CCATGATTTTACAAAGGAAA+AGG | + | chr3.2:41080402-41080421 | MS.gene068835:intron | 30.0% |
! | CCTTTTCCTTTGTAAAATCA+TGG | - | chr3.2:41080405-41080424 | None:intergenic | 30.0% |
! | GAAGTTTTACATATCAGCAA+AGG | + | chr3.2:41078537-41078556 | MS.gene068835:CDS | 30.0% |
! | TAAATGGCTCTATACCTTAA+AGG | + | chr3.2:41084380-41084399 | MS.gene068835:intron | 30.0% |
! | TCATGCTGATATGATTTTTG+TGG | + | chr3.2:41083679-41083698 | MS.gene068835:intron | 30.0% |
! | TGACAACCATGATTTTACAA+AGG | + | chr3.2:41080396-41080415 | MS.gene068835:intron | 30.0% |
! | TTATCTTTTCCCCAAATCTT+TGG | + | chr3.2:41084326-41084345 | MS.gene068835:intron | 30.0% |
! | TTTTTCTTCTCTGCATCAAA+AGG | + | chr3.2:41081592-41081611 | MS.gene068835:intron | 30.0% |
!! | ATTGAATGAATTTTCAAGCG+TGG | - | chr3.2:41083295-41083314 | None:intergenic | 30.0% |
!! | CTGAGGTAATGAGTTATTTT+TGG | + | chr3.2:41083598-41083617 | MS.gene068835:intron | 30.0% |
!! | GAAATTGCATGATTTGTTAG+AGG | - | chr3.2:41083006-41083025 | None:intergenic | 30.0% |
!! | GCAATTTGTTAACAAAACAC+GGG | - | chr3.2:41079708-41079727 | None:intergenic | 30.0% |
!! | GTTGATGTTAGTTTGTACAT+TGG | + | chr3.2:41079317-41079336 | MS.gene068835:intron | 30.0% |
!!! | ATTTGTGAAGGTTTTGAGTT+TGG | + | chr3.2:41079941-41079960 | MS.gene068835:intron | 30.0% |
AAAATCACGGTAACACACAT+TGG | - | chr3.2:41081843-41081862 | None:intergenic | 35.0% | |
AAAGGATCAATGATCAGGAA+TGG | + | chr3.2:41084398-41084417 | MS.gene068835:intron | 35.0% | |
AACTTCAATAATGTGTGCAC+AGG | - | chr3.2:41081924-41081943 | None:intergenic | 35.0% | |
AATATCAAACGGTAAGGGAT+CGG | + | chr3.2:41078576-41078595 | MS.gene068835:CDS | 35.0% | |
AATGCAATATATGCAAGGTC+TGG | + | chr3.2:41080087-41080106 | MS.gene068835:intron | 35.0% | |
ACACTGTCTTTGTCTTAAGT+TGG | + | chr3.2:41083131-41083150 | MS.gene068835:CDS | 35.0% | |
ACATATTCAGCTATCACAGA+TGG | + | chr3.2:41083032-41083051 | MS.gene068835:intron | 35.0% | |
ACCTTAAAGGATCAATGATC+AGG | + | chr3.2:41084393-41084412 | MS.gene068835:intron | 35.0% | |
ACTCTCCTTGCTAATTTCTT+CGG | - | chr3.2:41084713-41084732 | None:intergenic | 35.0% | |
AGAATATGCTGTAAATGCCA+TGG | + | chr3.2:41083158-41083177 | MS.gene068835:CDS | 35.0% | |
AGCCTAATAGACCAAAGATT+AGG | - | chr3.2:41084304-41084323 | None:intergenic | 35.0% | |
ATCAGCTGTTGTTGAAGTTA+AGG | + | chr3.2:41083398-41083417 | MS.gene068835:CDS | 35.0% | |
ATGATCGTTATGAGGAACAT+TGG | + | chr3.2:41082650-41082669 | MS.gene068835:intron | 35.0% | |
ATGCAATATATGCAAGGTCT+GGG | + | chr3.2:41080088-41080107 | MS.gene068835:intron | 35.0% | |
ATGGATCTATAGGATGTACT+TGG | - | chr3.2:41084654-41084673 | None:intergenic | 35.0% | |
ATGTCTTCCAAATGAAGTGT+CGG | - | chr3.2:41082756-41082775 | None:intergenic | 35.0% | |
CAAAGACAGTGTAAACTATG+GGG | - | chr3.2:41083123-41083142 | None:intergenic | 35.0% | |
CAATGAACTTGTGAAAGAGA+TGG | + | chr3.2:41082142-41082161 | MS.gene068835:CDS | 35.0% | |
CAATGCACTACCAATTTCAT+AGG | - | chr3.2:41081451-41081470 | None:intergenic | 35.0% | |
CATTATCAGTTAGGAGAACT+AGG | - | chr3.2:41083245-41083264 | None:intergenic | 35.0% | |
CCAAAACAACCAAAGATTTG+GGG | - | chr3.2:41084338-41084357 | None:intergenic | 35.0% | |
CCACGCTTTGTCAAAATATT+GGG | + | chr3.2:41079513-41079532 | MS.gene068835:intron | 35.0% | |
GACAAAGACAGTGTAAACTA+TGG | - | chr3.2:41083125-41083144 | None:intergenic | 35.0% | |
GCCTAATAGACCAAAGATTA+GGG | - | chr3.2:41084303-41084322 | None:intergenic | 35.0% | |
GGAACTCATTCCCAAAATTA+TGG | - | chr3.2:41084452-41084471 | None:intergenic | 35.0% | |
GTAAATCTGACAACTTCATG+TGG | - | chr3.2:41084473-41084492 | None:intergenic | 35.0% | |
GTAAGCATAACTCAGTTGAT+AGG | + | chr3.2:41078982-41079001 | MS.gene068835:intron | 35.0% | |
GTACCAAAAATGTAGACATG+TGG | - | chr3.2:41080961-41080980 | None:intergenic | 35.0% | |
GTTATGAGGAACATTGGTAA+AGG | + | chr3.2:41082656-41082675 | MS.gene068835:intron | 35.0% | |
TAAGTGACCTAGAACATTGT+CGG | - | chr3.2:41079743-41079762 | None:intergenic | 35.0% | |
TCACAAAGGTTGTCAAAAAG+TGG | + | chr3.2:41080497-41080516 | MS.gene068835:intron | 35.0% | |
TCACACAAAGTGGCTTAAAT+AGG | + | chr3.2:41079662-41079681 | MS.gene068835:intron | 35.0% | |
TCAGCTGTTGTTGAAGTTAA+GGG | + | chr3.2:41083399-41083418 | MS.gene068835:CDS | 35.0% | |
TCCACGCTTTGTCAAAATAT+TGG | + | chr3.2:41079512-41079531 | MS.gene068835:intron | 35.0% | |
TCCCTAATCTTTGGTCTATT+AGG | + | chr3.2:41084299-41084318 | MS.gene068835:intron | 35.0% | |
TCCTGATCATTGATCCTTTA+AGG | - | chr3.2:41084397-41084416 | None:intergenic | 35.0% | |
TCTTGAAAGCAAAAGCTTTG+AGG | - | chr3.2:41082181-41082200 | None:intergenic | 35.0% | |
TGACCCAAAAGGAAACAATA+AGG | - | chr3.2:41082284-41082303 | None:intergenic | 35.0% | |
TGGACAATGCAATATATGCA+AGG | + | chr3.2:41080082-41080101 | MS.gene068835:intron | 35.0% | |
TTACCTCAGGCATATAAATG+CGG | - | chr3.2:41083587-41083606 | None:intergenic | 35.0% | |
TTCTGCTACATAATGTGTCA+TGG | + | chr3.2:41084058-41084077 | MS.gene068835:intron | 35.0% | |
! | AACAGCTGATTCAACAGAAT+TGG | - | chr3.2:41083388-41083407 | None:intergenic | 35.0% |
! | CAATGTTCTAGGTCACTTAT+TGG | + | chr3.2:41079744-41079763 | MS.gene068835:intron | 35.0% |
! | CACTGGTAAGTGTCTTTTTA+TGG | + | chr3.2:41079397-41079416 | MS.gene068835:intron | 35.0% |
! | TAAGCCACTTTGTGTGAAAA+AGG | - | chr3.2:41079659-41079678 | None:intergenic | 35.0% |
! | TCAATGCTTGTGACTGATTT+AGG | + | chr3.2:41084673-41084692 | MS.gene068835:CDS | 35.0% |
! | TGAAAAGCATGACATTGCTT+GGG | + | chr3.2:41081298-41081317 | MS.gene068835:intron | 35.0% |
! | TTTTGTTAGAGTTGCGATCT+TGG | + | chr3.2:41078723-41078742 | MS.gene068835:CDS | 35.0% |
! | TTTTTACACGCAAGGAAATG+AGG | + | chr3.2:41078860-41078879 | MS.gene068835:intron | 35.0% |
!! | AAATCAGTCACAAGCATTGA+TGG | - | chr3.2:41084673-41084692 | None:intergenic | 35.0% |
!! | AATATACAAGTTGGTGCAGA+AGG | - | chr3.2:41081980-41081999 | None:intergenic | 35.0% |
!! | ACAAGCATTGATGGATCTAT+AGG | - | chr3.2:41084664-41084683 | None:intergenic | 35.0% |
!! | AGGTTTTGTACAGGTTTATG+TGG | - | chr3.2:41081904-41081923 | None:intergenic | 35.0% |
!! | GAAGACAATTTTGGCGATTT+TGG | + | chr3.2:41081755-41081774 | MS.gene068835:intron | 35.0% |
!!! | AAACTTTTTTTAGTGGTGGC+CGG | - | chr3.2:41080123-41080142 | None:intergenic | 35.0% |
!!! | GCTACTTTTTGCTCTTCATT+GGG | + | chr3.2:41078757-41078776 | MS.gene068835:CDS | 35.0% |
!!! | TGCTACTTTTTGCTCTTCAT+TGG | + | chr3.2:41078756-41078775 | MS.gene068835:CDS | 35.0% |
AACAGCAGGAGTCAGTTTAT+TGG | + | chr3.2:41083076-41083095 | MS.gene068835:CDS | 40.0% | |
AAGTTTCAACCATTTCCGGT+AGG | - | chr3.2:41083995-41084014 | None:intergenic | 40.0% | |
ACGACTCTAACAACATGAAC+TGG | - | chr3.2:41080842-41080861 | None:intergenic | 40.0% | |
ACTTCTGAGCTTAACTCAGT+TGG | + | chr3.2:41080057-41080076 | MS.gene068835:intron | 40.0% | |
AGAACTAGGTGATGAAGAGT+AGG | - | chr3.2:41083231-41083250 | None:intergenic | 40.0% | |
AGAATCATGACATGCCAATG+TGG | + | chr3.2:41081796-41081815 | MS.gene068835:intron | 40.0% | |
AGGGACATAAAAATGCTGAC+TGG | + | chr3.2:41081151-41081170 | MS.gene068835:intron | 40.0% | |
AGGGATTGCACCAATATGAT+TGG | + | chr3.2:41083418-41083437 | MS.gene068835:CDS | 40.0% | |
AGTTGCATTTGTGCAATCTG+TGG | + | chr3.2:41081485-41081504 | MS.gene068835:intron | 40.0% | |
CAAACATAACAGAGACCTAC+CGG | + | chr3.2:41083977-41083996 | MS.gene068835:CDS | 40.0% | |
CAACTGAGTTATGCTTACGA+GGG | - | chr3.2:41078980-41078999 | None:intergenic | 40.0% | |
CCATCAAATGCAATCAAGGA+AGG | - | chr3.2:41084631-41084650 | None:intergenic | 40.0% | |
CCCATAAACTTCGATACTCT+GGG | - | chr3.2:41084798-41084817 | None:intergenic | 40.0% | |
CCTTCCTTGATTGCATTTGA+TGG | + | chr3.2:41084628-41084647 | MS.gene068835:CDS | 40.0% | |
CTCATATCATCGAGTTTCGA+CGG | + | chr3.2:41083895-41083914 | MS.gene068835:CDS | 40.0% | |
CTTATGCTTCAATGCATGCT+TGG | + | chr3.2:41083355-41083374 | MS.gene068835:CDS | 40.0% | |
GAACGCCTAGTGCATTATTA+TGG | - | chr3.2:41082368-41082387 | None:intergenic | 40.0% | |
GAACTAGGTGATGAAGAGTA+GGG | - | chr3.2:41083230-41083249 | None:intergenic | 40.0% | |
GAATCATGACATGCCAATGT+GGG | + | chr3.2:41081797-41081816 | MS.gene068835:intron | 40.0% | |
GAGAGAGAAAGTTGTCACAA+AGG | + | chr3.2:41080483-41080502 | MS.gene068835:intron | 40.0% | |
GATCAATGATCAGGAATGGA+GGG | + | chr3.2:41084402-41084421 | MS.gene068835:intron | 40.0% | |
GATCTTAATGGCAAAGTCAG+TGG | + | chr3.2:41083793-41083812 | MS.gene068835:CDS | 40.0% | |
GCAAAACCATGGCTTGAAAT+TGG | + | chr3.2:41084769-41084788 | MS.gene068835:CDS | 40.0% | |
GCCTTGCAACTGAATTCATT+GGG | + | chr3.2:41082410-41082429 | MS.gene068835:intron | 40.0% | |
GTCATTGCTTCATAGTGCAT+AGG | + | chr3.2:41082926-41082945 | MS.gene068835:intron | 40.0% | |
GTGATTACCGACAATGTTCT+AGG | + | chr3.2:41079733-41079752 | MS.gene068835:intron | 40.0% | |
GTGGTTCAGTATTCAAGTCT+TGG | + | chr3.2:41083812-41083831 | MS.gene068835:CDS | 40.0% | |
GTTGCATTTGTGCAATCTGT+GGG | + | chr3.2:41081486-41081505 | MS.gene068835:intron | 40.0% | |
TATTGGCATCTAGCATCACA+CGG | + | chr3.2:41083093-41083112 | MS.gene068835:CDS | 40.0% | |
TATTGGGCAATTCACGTTAC+TGG | + | chr3.2:41079529-41079548 | MS.gene068835:intron | 40.0% | |
TCAAATGCAATCAAGGAAGG+TGG | - | chr3.2:41084628-41084647 | None:intergenic | 40.0% | |
TCAACTGAGTTATGCTTACG+AGG | - | chr3.2:41078981-41079000 | None:intergenic | 40.0% | |
TCCCAATGAATTCAGTTGCA+AGG | - | chr3.2:41082414-41082433 | None:intergenic | 40.0% | |
TCGAAACTCGATGATATGAG+AGG | - | chr3.2:41083895-41083914 | None:intergenic | 40.0% | |
TGCAATATATGCAAGGTCTG+GGG | + | chr3.2:41080089-41080108 | MS.gene068835:intron | 40.0% | |
TGCCTTGCAACTGAATTCAT+TGG | + | chr3.2:41082409-41082428 | MS.gene068835:intron | 40.0% | |
TGGTCTGAAGAAATGAATGC+TGG | + | chr3.2:41083438-41083457 | MS.gene068835:CDS | 40.0% | |
TGTACGACACTGACACATAT+CGG | - | chr3.2:41082787-41082806 | None:intergenic | 40.0% | |
TGTTAGAGTCGTTTGTCAGA+CGG | + | chr3.2:41080850-41080869 | MS.gene068835:intron | 40.0% | |
TTCATCAAAGAAAGGCTGCT+AGG | - | chr3.2:41083558-41083577 | None:intergenic | 40.0% | |
TTGGCCATCAAATGCAATCA+AGG | - | chr3.2:41084635-41084654 | None:intergenic | 40.0% | |
TTGTGGGACGTAGATCTTAA+TGG | + | chr3.2:41083781-41083800 | MS.gene068835:CDS | 40.0% | |
TTTCACAGAACCTCAAGTCT+GGG | + | chr3.2:41084575-41084594 | MS.gene068835:intron | 40.0% | |
! | AGCTGATTCAACAGAATTGG+TGG | - | chr3.2:41083385-41083404 | None:intergenic | 40.0% |
! | CAAGCAATGTCATGCTTTTC+AGG | - | chr3.2:41081299-41081318 | None:intergenic | 40.0% |
! | CCCCAAATCTTTGGTTGTTT+TGG | + | chr3.2:41084335-41084354 | MS.gene068835:intron | 40.0% |
! | CTGAAAAGCATGACATTGCT+TGG | + | chr3.2:41081297-41081316 | MS.gene068835:intron | 40.0% |
! | GGAGTTGGTTCATCAAAGAA+AGG | - | chr3.2:41083566-41083585 | None:intergenic | 40.0% |
! | TGAATTTGCTTCTCGCCTTT+CGG | + | chr3.2:41083203-41083222 | MS.gene068835:CDS | 40.0% |
! | TGAGCTTAACTCAGTTGGTA+TGG | + | chr3.2:41080062-41080081 | MS.gene068835:intron | 40.0% |
!! | ATTTCAAGCCATGGTTTTGC+AGG | - | chr3.2:41084769-41084788 | None:intergenic | 40.0% |
!! | ATTTGTCATGGTTCTGGGTT+TGG | + | chr3.2:41079895-41079914 | MS.gene068835:intron | 40.0% |
!! | CCAGAGTATCGAAGTTTATG+GGG | + | chr3.2:41084796-41084815 | MS.gene068835:CDS | 40.0% |
!! | CCCAGAGTATCGAAGTTTAT+GGG | + | chr3.2:41084795-41084814 | MS.gene068835:CDS | 40.0% |
!! | GAATGAATTTTCAAGCGTGG+AGG | - | chr3.2:41083292-41083311 | None:intergenic | 40.0% |
!! | GGAATTTTCGAGAGAAAAGC+TGG | - | chr3.2:41080821-41080840 | None:intergenic | 40.0% |
!! | GGTTCCTTTTTCACACAAAG+TGG | + | chr3.2:41079652-41079671 | MS.gene068835:intron | 40.0% |
!! | TCCCAGAGTATCGAAGTTTA+TGG | + | chr3.2:41084794-41084813 | MS.gene068835:CDS | 40.0% |
!! | TTTCAAGCCATGGTTTTGCA+GGG | - | chr3.2:41084768-41084787 | None:intergenic | 40.0% |
!!! | AACTTTTTTTAGTGGTGGCC+GGG | - | chr3.2:41080122-41080141 | None:intergenic | 40.0% |
!!! | CCCAATATTTTGACAAAGCG+TGG | - | chr3.2:41079516-41079535 | None:intergenic | 40.0% |
!!! | TGTGAAGGTTTTGAGTTTGG+AGG | + | chr3.2:41079944-41079963 | MS.gene068835:intron | 40.0% |
AACATGCACACTGACCCAAA+AGG | - | chr3.2:41082295-41082314 | None:intergenic | 45.0% | |
ACTCCGCATTTATATGCCTG+AGG | + | chr3.2:41083581-41083600 | MS.gene068835:CDS | 45.0% | |
AGACCAAAGATTAGGGACGT+AGG | - | chr3.2:41084296-41084315 | None:intergenic | 45.0% | |
AGTTTCGACGGTGAACAATG+TGG | + | chr3.2:41083907-41083926 | MS.gene068835:CDS | 45.0% | |
ATGACTGTTGCAGAATGTGC+TGG | + | chr3.2:41079345-41079364 | MS.gene068835:intron | 45.0% | |
ATTTGCTTCCATTAGCGCTC+TGG | - | chr3.2:41082084-41082103 | None:intergenic | 45.0% | |
CAGGCATATAAATGCGGAGT+TGG | - | chr3.2:41083581-41083600 | None:intergenic | 45.0% | |
CCCCATAAACTTCGATACTC+TGG | - | chr3.2:41084799-41084818 | None:intergenic | 45.0% | |
CGGCAAGGACATTATCAGTT+AGG | - | chr3.2:41083254-41083273 | None:intergenic | 45.0% | |
GAAAGGCGAGAAGCAAATTC+AGG | - | chr3.2:41083204-41083223 | None:intergenic | 45.0% | |
GACCAAAGATTAGGGACGTA+GGG | - | chr3.2:41084295-41084314 | None:intergenic | 45.0% | |
GCGCTAATGGAAGCAAATGA+TGG | + | chr3.2:41082086-41082105 | MS.gene068835:CDS | 45.0% | |
GCTATCACAGATGGAACACA+AGG | + | chr3.2:41083041-41083060 | MS.gene068835:intron | 45.0% | |
GCTTCGGTTATCCATTTCAG+TGG | + | chr3.2:41084742-41084761 | MS.gene068835:CDS | 45.0% | |
GGATCAATGATCAGGAATGG+AGG | + | chr3.2:41084401-41084420 | MS.gene068835:intron | 45.0% | |
GGGAAACCAATTTCAAGCCA+TGG | - | chr3.2:41084778-41084797 | None:intergenic | 45.0% | |
GTTTCACAGAACCTCAAGTC+TGG | + | chr3.2:41084574-41084593 | MS.gene068835:intron | 45.0% | |
GTTTCGACGGTGAACAATGT+GGG | + | chr3.2:41083908-41083927 | MS.gene068835:CDS | 45.0% | |
TAACAGAGACCTACCGGAAA+TGG | + | chr3.2:41083983-41084002 | MS.gene068835:CDS | 45.0% | |
TGACTGTTGCAGAATGTGCT+GGG | + | chr3.2:41079346-41079365 | MS.gene068835:intron | 45.0% | |
TGATTCTGTCAAGCCCACAT+TGG | - | chr3.2:41081813-41081832 | None:intergenic | 45.0% | |
TGCACTAGGCGTTCACAAAA+TGG | + | chr3.2:41082374-41082393 | MS.gene068835:intron | 45.0% | |
TGCTTTCAAGACCAAAGCCA+TGG | + | chr3.2:41082190-41082209 | MS.gene068835:CDS | 45.0% | |
TTTGTGCAATCTGTGGGACA+TGG | + | chr3.2:41081492-41081511 | MS.gene068835:intron | 45.0% | |
! | TGCTGGTGTTAAAGAGATGC+TGG | + | chr3.2:41083455-41083474 | MS.gene068835:CDS | 45.0% |
!! | TGTAGCACCGACACTTCATT+TGG | + | chr3.2:41082746-41082765 | MS.gene068835:intron | 45.0% |
!! | TGTGTGCACAGGTTTTGTAC+AGG | - | chr3.2:41081913-41081932 | None:intergenic | 45.0% |
!!! | ACTTTTTTTAGTGGTGGCCG+GGG | - | chr3.2:41080121-41080140 | None:intergenic | 45.0% |
!! | ATAGAAAAATATTATTAAAA+TGG | + | chr3.2:41079577-41079596 | MS.gene068835:intron | 5.0% |
!! | TAGTTATTAAAATATTATAA+TGG | + | chr3.2:41078933-41078952 | MS.gene068835:intron | 5.0% |
!!! | AATATTTTTATTTAGTATTT+TGG | - | chr3.2:41079227-41079246 | None:intergenic | 5.0% |
!!! | AATTTTAAATAATTTTTTTG+TGG | + | chr3.2:41079612-41079631 | MS.gene068835:intron | 5.0% |
!!! | ATATTTTTATTTAGTATTTT+GGG | - | chr3.2:41079226-41079245 | None:intergenic | 5.0% |
!!! | TAATATATAGATTTTTTTTA+GGG | - | chr3.2:41080693-41080712 | None:intergenic | 5.0% |
!!! | TTAATATATAGATTTTTTTT+AGG | - | chr3.2:41080694-41080713 | None:intergenic | 5.0% |
AAGCAAATTCAGGAGGAGGC+AGG | - | chr3.2:41083194-41083213 | None:intergenic | 50.0% | |
AAGGAAGGTGGAAGAACTCC+TGG | - | chr3.2:41084616-41084635 | None:intergenic | 50.0% | |
AGATCCGGAAAAAGCTGTCG+TGG | - | chr3.2:41083706-41083725 | None:intergenic | 50.0% | |
AGGCGAGAAGCAAATTCAGG+AGG | - | chr3.2:41083201-41083220 | None:intergenic | 50.0% | |
ATCCCAAGCACTAACACCAC+CGG | - | chr3.2:41078688-41078707 | None:intergenic | 50.0% | |
CCGACTGTTAGTGGTTCTTC+CGG | + | chr3.2:41078634-41078653 | MS.gene068835:CDS | 50.0% | |
CCGGAAGAACCACTAACAGT+CGG | - | chr3.2:41078637-41078656 | None:intergenic | 50.0% | |
CGAGAAGCAAATTCAGGAGG+AGG | - | chr3.2:41083198-41083217 | None:intergenic | 50.0% | |
CTCCCTACGTCCCTAATCTT+TGG | + | chr3.2:41084290-41084309 | MS.gene068835:intron | 50.0% | |
GATGAAGAGTAGGGTCCGAA+AGG | - | chr3.2:41083221-41083240 | None:intergenic | 50.0% | |
GGAGAGTCTAGAAGCTGCTT+CGG | + | chr3.2:41084726-41084745 | MS.gene068835:CDS | 50.0% | |
GGTGCAAACAGCAAAACAGC+AGG | + | chr3.2:41083062-41083081 | MS.gene068835:CDS | 50.0% | |
TGGGTCAGTGTGCATGTTTC+AGG | + | chr3.2:41082297-41082316 | MS.gene068835:intron | 50.0% | |
! | GAACAATGTGGGTGGCTCTA+TGG | + | chr3.2:41083919-41083938 | MS.gene068835:CDS | 50.0% |
! | GTTTTGCAGGGCCACTGAAA+TGG | - | chr3.2:41084756-41084775 | None:intergenic | 50.0% |
! | TGAGCTAACCAGAGCGCTAA+TGG | + | chr3.2:41082073-41082092 | MS.gene068835:CDS | 50.0% |
! | TTCCGGTGGTGTTAGTGCTT+GGG | + | chr3.2:41078683-41078702 | MS.gene068835:CDS | 50.0% |
!! | TGGACCACGACAGCTTTTTC+CGG | + | chr3.2:41083699-41083718 | MS.gene068835:intron | 50.0% |
AAACGGTAAGGGATCGGCGA+AGG | + | chr3.2:41078582-41078601 | MS.gene068835:CDS | 55.0% | |
AAGGATACAACGACGACGGC+GGG | + | chr3.2:41078601-41078620 | MS.gene068835:CDS | 55.0% | |
ACAGTGCTGTCCCAGACTTG+AGG | - | chr3.2:41084588-41084607 | None:intergenic | 55.0% | |
CGTGGAGGCTACAACAACAG+AGG | - | chr3.2:41083277-41083296 | None:intergenic | 55.0% | |
CTACAACAACAGAGGCGGCA+AGG | - | chr3.2:41083269-41083288 | None:intergenic | 55.0% | |
CTGTTGCAGAATGTGCTGGG+TGG | + | chr3.2:41079349-41079368 | MS.gene068835:intron | 55.0% | |
GAAGGATACAACGACGACGG+CGG | + | chr3.2:41078600-41078619 | MS.gene068835:CDS | 55.0% | |
GCACAGTCCGGAGTGAAATC+CGG | - | chr3.2:41078663-41078682 | None:intergenic | 55.0% | |
GGAGGAAGTCCGACTGTTAG+TGG | + | chr3.2:41078625-41078644 | MS.gene068835:CDS | 55.0% | |
GGAGGCTACAACAACAGAGG+CGG | - | chr3.2:41083274-41083293 | None:intergenic | 55.0% | |
GGCGAAGGATACAACGACGA+CGG | + | chr3.2:41078597-41078616 | MS.gene068835:CDS | 55.0% | |
TCAGTGGCCCTGCAAAACCA+TGG | + | chr3.2:41084758-41084777 | MS.gene068835:CDS | 55.0% | |
TCGACGGTGAACAATGTGGG+TGG | + | chr3.2:41083911-41083930 | MS.gene068835:CDS | 55.0% | |
TGTGAAGACAACTGCTGCCC+TGG | + | chr3.2:41083835-41083854 | MS.gene068835:CDS | 55.0% | |
TTAGTGGTTCTTCCGGTCGC+CGG | + | chr3.2:41078641-41078660 | MS.gene068835:CDS | 55.0% | |
TTCACTCCGGACTGTGCTTC+CGG | + | chr3.2:41078666-41078685 | MS.gene068835:CDS | 55.0% | |
TTGCAGAATGTGCTGGGTGG+AGG | + | chr3.2:41079352-41079371 | MS.gene068835:intron | 55.0% | |
! | AAGGTCTGGGGTTCAAACCC+CGG | + | chr3.2:41080101-41080120 | MS.gene068835:intron | 55.0% |
! | CTTCCGGTGGTGTTAGTGCT+TGG | + | chr3.2:41078682-41078701 | MS.gene068835:CDS | 55.0% |
! | TCAAGTCTGGGACAGCACTG+TGG | + | chr3.2:41084587-41084606 | MS.gene068835:CDS | 55.0% |
!! | GCTGGGTGGAGGTTTTTCAG+TGG | + | chr3.2:41079363-41079382 | MS.gene068835:CDS | 55.0% |
CAGTGGAGCTGACACGTCAC+TGG | + | chr3.2:41079380-41079399 | MS.gene068835:CDS | 60.0% | |
GGGACAGCACTGTGGAATCC+AGG | + | chr3.2:41084595-41084614 | MS.gene068835:CDS | 60.0% | |
! | ACACCACCGGAAGCACAGTC+CGG | - | chr3.2:41078675-41078694 | None:intergenic | 60.0% |
ACTCCGGACTGTGCTTCCGG+TGG | + | chr3.2:41078669-41078688 | MS.gene068835:CDS | 65.0% | |
AGGCAGGCGAGATCGAGCCA+TGG | - | chr3.2:41083178-41083197 | None:intergenic | 65.0% | |
CCGGAGTGAAATCCGGCGAC+CGG | - | chr3.2:41078656-41078675 | None:intergenic | 65.0% | |
CCGGTCGCCGGATTTCACTC+CGG | + | chr3.2:41078653-41078672 | MS.gene068835:CDS | 65.0% | |
GATACAACGACGACGGCGGG+AGG | + | chr3.2:41078604-41078623 | MS.gene068835:CDS | 65.0% | |
ACAACGACGACGGCGGGAGG+AGG | + | chr3.2:41078607-41078626 | MS.gene068835:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 41078535 | 41084873 | 41078535 | ID=MS.gene068835 |
chr3.2 | mRNA | 41078535 | 41084873 | 41078535 | ID=MS.gene068835.t1;Parent=MS.gene068835 |
chr3.2 | exon | 41078535 | 41078778 | 41078535 | ID=MS.gene068835.t1.exon1;Parent=MS.gene068835.t1 |
chr3.2 | CDS | 41078535 | 41078778 | 41078535 | ID=cds.MS.gene068835.t1;Parent=MS.gene068835.t1 |
chr3.2 | exon | 41079358 | 41079401 | 41079358 | ID=MS.gene068835.t1.exon2;Parent=MS.gene068835.t1 |
chr3.2 | CDS | 41079358 | 41079401 | 41079358 | ID=cds.MS.gene068835.t1;Parent=MS.gene068835.t1 |
chr3.2 | exon | 41082062 | 41082211 | 41082062 | ID=MS.gene068835.t1.exon3;Parent=MS.gene068835.t1 |
chr3.2 | CDS | 41082062 | 41082211 | 41082062 | ID=cds.MS.gene068835.t1;Parent=MS.gene068835.t1 |
chr3.2 | exon | 41083042 | 41083602 | 41083042 | ID=MS.gene068835.t1.exon4;Parent=MS.gene068835.t1 |
chr3.2 | CDS | 41083042 | 41083602 | 41083042 | ID=cds.MS.gene068835.t1;Parent=MS.gene068835.t1 |
chr3.2 | exon | 41083712 | 41084014 | 41083712 | ID=MS.gene068835.t1.exon5;Parent=MS.gene068835.t1 |
chr3.2 | CDS | 41083712 | 41084014 | 41083712 | ID=cds.MS.gene068835.t1;Parent=MS.gene068835.t1 |
chr3.2 | exon | 41084583 | 41084873 | 41084583 | ID=MS.gene068835.t1.exon6;Parent=MS.gene068835.t1 |
chr3.2 | CDS | 41084583 | 41084873 | 41084583 | ID=cds.MS.gene068835.t1;Parent=MS.gene068835.t1 |
Gene Sequence |
Protein sequence |