AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068999

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068999.t1 MTR_7g070060 98.653 297 4 0 1 297 14 310 0.0 615
MS.gene068999.t1 MTR_7g070060 98.311 296 5 0 2 297 117 412 0.0 613
MS.gene068999.t1 MTR_4g014440 83.784 296 48 0 2 297 115 410 0.0 536
MS.gene068999.t1 MTR_7g070060 97.790 181 4 0 2 182 117 297 4.79e-129 370
MS.gene068999.t1 MTR_4g014430 53.584 293 129 3 2 294 161 446 1.27e-108 322
MS.gene068999.t1 MTR_3g071650 50.847 295 139 3 2 295 142 431 9.30e-105 312
MS.gene068999.t1 MTR_5g083260 51.525 295 137 3 2 295 136 425 1.28e-104 311
MS.gene068999.t1 MTR_3g070900 48.986 296 143 5 2 294 159 449 1.37e-92 282
MS.gene068999.t1 MTR_8g463790 46.284 296 148 6 2 295 124 410 3.09e-92 280
MS.gene068999.t1 MTR_4g016940 44.932 296 153 6 2 294 139 427 2.50e-87 267
MS.gene068999.t1 MTR_5g082880 45.364 302 154 6 2 297 218 514 8.75e-85 263
MS.gene068999.t1 MTR_7g068920 44.068 295 157 5 2 294 133 421 2.64e-81 252
MS.gene068999.t1 MTR_8g069790 36.824 296 171 6 5 295 233 517 2.33e-58 195
MS.gene068999.t1 MTR_0136s0010 36.242 298 171 7 2 292 222 507 3.63e-58 194
MS.gene068999.t1 MTR_5g033800 35.117 299 178 6 2 295 197 484 4.98e-58 194
MS.gene068999.t1 MTR_3g464570 32.550 298 182 7 2 295 95 377 1.30e-55 184
MS.gene068999.t1 MTR_7g093450 36.634 303 169 8 2 295 300 588 1.64e-55 189
MS.gene068999.t1 MTR_4g121560 36.601 306 164 10 2 295 167 454 2.23e-55 186
MS.gene068999.t1 MTR_7g109550 36.545 301 167 7 2 297 189 470 1.22e-54 184
MS.gene068999.t1 MTR_5g071350 32.131 305 182 6 2 295 110 400 6.23e-54 181
MS.gene068999.t1 MTR_3g464570 32.168 286 175 7 14 295 3 273 1.80e-53 176
MS.gene068999.t1 MTR_1g050448 33.106 293 175 7 2 294 104 375 1.99e-53 179
MS.gene068999.t1 MTR_1g112210 32.423 293 178 7 2 294 110 382 3.51e-52 176
MS.gene068999.t1 MTR_5g059400 32.107 299 189 6 2 295 227 516 4.28e-50 173
MS.gene068999.t1 MTR_1g116130 32.107 299 189 6 2 295 227 516 4.28e-50 173
MS.gene068999.t1 MTR_1g112210 31.399 293 168 7 2 294 110 369 5.88e-49 167
MS.gene068999.t1 MTR_2g073510 33.106 293 171 7 2 294 86 353 3.10e-48 164
MS.gene068999.t1 MTR_2g022560 34.967 306 165 12 2 292 149 435 3.23e-48 167
MS.gene068999.t1 MTR_7g094750 34.615 312 169 9 2 297 143 435 1.28e-47 165
MS.gene068999.t1 MTR_4g087730 32.423 293 171 8 2 294 97 362 1.77e-47 163
MS.gene068999.t1 MTR_3g049330 31.959 291 173 7 2 292 83 348 1.86e-47 162
MS.gene068999.t1 MTR_4g088030 33.447 293 168 8 2 294 85 350 3.83e-47 161
MS.gene068999.t1 MTR_1g058380 32.673 303 183 6 2 297 109 397 4.03e-47 163
MS.gene068999.t1 MTR_5g034810 32.653 294 171 10 2 294 85 352 9.30e-46 158
MS.gene068999.t1 MTR_3g021060 31.525 295 171 7 2 294 98 363 2.78e-45 157
MS.gene068999.t1 MTR_3g035830 32.997 297 168 8 2 296 83 350 2.96e-45 157
MS.gene068999.t1 MTR_4g126950 31.475 305 184 8 2 297 161 449 1.79e-44 157
MS.gene068999.t1 MTR_2g073500 31.081 296 166 7 2 295 87 346 2.25e-44 154
MS.gene068999.t1 MTR_3g021090 33.333 291 163 7 2 290 83 344 6.73e-44 154
MS.gene068999.t1 MTR_2g091175 29.831 295 179 7 2 296 102 368 6.49e-42 148
MS.gene068999.t1 MTR_2g015720 30.375 293 177 8 2 294 93 358 7.51e-42 148
MS.gene068999.t1 MTR_4g079700 29.352 293 179 7 2 294 99 363 2.34e-41 147
MS.gene068999.t1 MTR_3g090120 27.541 305 185 8 2 297 185 462 3.81e-37 137
MS.gene068999.t1 MTR_8g093530 27.303 304 187 9 2 297 142 419 1.47e-36 135
MS.gene068999.t1 MTR_1g111010 29.492 295 171 10 2 296 86 343 1.78e-35 131
MS.gene068999.t1 MTR_5g033800 32.967 182 115 2 6 182 201 380 6.80e-28 111
MS.gene068999.t1 MTR_4g125060 28.803 309 182 11 2 294 185 471 6.49e-27 109
MS.gene068999.t1 MTR_4g125060 28.479 309 183 10 2 294 224 510 7.90e-27 109
MS.gene068999.t1 MTR_4g125060 28.803 309 182 11 2 294 253 539 8.41e-27 110
MS.gene068999.t1 MTR_6g016875 30.565 301 185 11 2 290 116 404 1.87e-26 107
MS.gene068999.t1 MTR_7g094750 34.031 191 111 4 2 182 143 328 8.06e-25 102
MS.gene068999.t1 MTR_5g035150 28.296 311 181 15 2 290 137 427 4.40e-24 101
MS.gene068999.t1 MTR_6g016880 29.667 300 186 12 2 290 130 415 7.72e-24 100
MS.gene068999.t1 MTR_8g093870 26.730 318 177 13 2 294 186 472 1.31e-23 100
MS.gene068999.t1 MTR_5g069320 25.510 294 145 8 5 287 156 386 2.33e-23 99.0
MS.gene068999.t1 MTR_5g035090 27.832 309 191 13 2 294 135 427 1.10e-22 97.4
MS.gene068999.t1 MTR_8g104970 28.852 305 186 13 2 290 172 461 2.08e-22 97.1
MS.gene068999.t1 MTR_2g016060 26.129 310 189 13 2 290 106 396 5.91e-22 95.1
MS.gene068999.t1 MTR_7g033230 28.247 308 184 14 2 290 316 605 1.28e-21 95.1
MS.gene068999.t1 MTR_7g033230 28.247 308 184 14 2 290 386 675 2.36e-21 94.4
MS.gene068999.t1 MTR_8g027900 25.806 310 200 13 2 296 263 557 2.48e-21 94.4
MS.gene068999.t1 MTR_7g019120 28.289 304 185 14 2 290 131 416 3.14e-20 90.5
MS.gene068999.t1 MTR_5g035070 28.155 309 184 14 2 290 139 429 7.18e-20 89.4
MS.gene068999.t1 MTR_2g022580 38.843 121 60 4 10 120 2 118 1.31e-18 80.5
MS.gene068999.t1 MTR_6g016240 25.796 314 190 11 2 294 125 416 1.43e-18 85.5
MS.gene068999.t1 MTR_8g099300 24.272 309 207 12 2 296 126 421 3.42e-18 84.3
MS.gene068999.t1 MTR_3g109840 27.036 307 187 14 2 290 124 411 1.52e-17 82.8
MS.gene068999.t1 MTR_4g092830 26.168 321 184 14 2 296 101 394 1.99e-17 82.4
MS.gene068999.t1 MTR_1g076690 24.675 308 205 13 2 294 275 570 1.77e-15 77.0
MS.gene068999.t1 MTR_6g061710 24.510 306 208 11 2 294 219 514 2.13e-15 76.6
MS.gene068999.t1 MTR_3g021150 35.135 111 67 2 143 253 1 106 2.27e-15 71.2
MS.gene068999.t1 MTR_5g035140 30.041 243 141 12 65 290 31 261 2.63e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068999.t1 AT2G38320 70.034 297 87 2 2 297 29 324 6.85e-155 436
MS.gene068999.t1 AT2G38320 70.034 297 87 2 2 297 112 407 2.74e-154 437
MS.gene068999.t1 AT5G01620 52.560 293 132 3 2 294 172 457 9.18e-110 326
MS.gene068999.t1 AT5G01620 52.560 293 132 3 2 294 164 449 9.95e-110 325
MS.gene068999.t1 AT5G01620 52.560 293 132 3 2 294 164 449 9.95e-110 325
MS.gene068999.t1 AT2G40320 50.508 295 140 3 2 295 134 423 3.06e-105 313
MS.gene068999.t1 AT3G11030 49.831 295 143 3 2 295 159 449 1.50e-101 305
MS.gene068999.t1 AT2G40150 47.869 305 145 5 2 297 124 423 3.05e-95 288
MS.gene068999.t1 AT3G55990 48.161 299 147 5 2 297 193 486 1.90e-92 283
MS.gene068999.t1 AT1G73140 47.297 296 145 6 2 295 120 406 2.78e-92 280
MS.gene068999.t1 AT5G01360 45.763 295 153 4 2 294 89 378 3.41e-92 278
MS.gene068999.t1 AT5G01360 45.763 295 153 4 2 294 145 434 1.44e-91 278
MS.gene068999.t1 AT2G40160 45.333 300 151 9 2 294 130 423 1.80e-80 250
MS.gene068999.t1 AT2G40160 44.224 303 156 9 2 297 130 426 8.84e-80 248
MS.gene068999.t1 AT5G58600 34.459 296 177 5 2 294 119 400 3.86e-60 197
MS.gene068999.t1 AT5G49340 38.079 302 168 9 2 295 152 442 4.59e-58 193
MS.gene068999.t1 AT5G06700 38.047 297 167 7 2 292 307 592 1.29e-57 195
MS.gene068999.t1 AT3G12060 37.209 301 170 7 2 295 248 536 4.24e-57 192
MS.gene068999.t1 AT3G54260 34.797 296 171 7 2 296 102 376 7.26e-57 187
MS.gene068999.t1 AT1G60790 34.448 299 182 6 2 295 244 533 1.11e-56 191
MS.gene068999.t1 AT3G06080 34.936 312 169 10 2 297 155 448 1.36e-51 176
MS.gene068999.t1 AT1G78710 31.081 296 179 7 2 297 89 359 1.19e-50 171
MS.gene068999.t1 AT2G30900 33.221 298 173 8 2 297 95 368 5.16e-50 169
MS.gene068999.t1 AT3G11570 33.987 306 171 9 2 295 134 420 5.83e-50 171
MS.gene068999.t1 AT2G30010 32.673 303 180 8 2 295 110 397 6.32e-50 170
MS.gene068999.t1 AT3G62390 33.110 299 179 8 4 297 192 474 7.14e-50 172
MS.gene068999.t1 AT5G19160 34.076 314 172 7 2 297 151 447 9.08e-50 171
MS.gene068999.t1 AT2G30010 32.673 303 180 8 2 295 153 440 1.55e-49 170
MS.gene068999.t1 AT5G06230 32.558 301 184 5 2 296 79 366 6.88e-49 167
MS.gene068999.t1 AT2G40160 47.849 186 89 6 2 182 130 312 1.51e-48 164
MS.gene068999.t1 AT5G06230 32.558 301 184 5 2 296 120 407 1.73e-48 167
MS.gene068999.t1 AT1G29050 31.741 293 173 7 2 294 113 378 2.86e-48 165
MS.gene068999.t1 AT2G34070 31.293 294 174 8 2 294 117 383 4.30e-48 165
MS.gene068999.t1 AT3G14850 31.741 293 176 7 2 294 86 354 1.01e-47 163
MS.gene068999.t1 AT5G20590 33.550 307 175 10 2 297 194 482 3.03e-46 162
MS.gene068999.t1 AT2G42570 32.770 296 172 8 2 297 99 367 7.30e-46 159
MS.gene068999.t1 AT2G34070 30.797 276 163 8 20 294 1 249 1.90e-43 149
MS.gene068999.t1 AT3G14850 31.636 275 164 7 20 294 1 251 1.91e-43 149
MS.gene068999.t1 AT2G31110 31.058 293 175 7 2 294 97 362 1.10e-40 145
MS.gene068999.t1 AT1G48880 29.450 309 172 11 2 297 167 442 2.34e-37 138
MS.gene068999.t1 AT1G78710 27.703 296 136 9 2 297 82 299 3.86e-32 121
MS.gene068999.t1 AT5G58600 33.149 181 113 2 2 182 119 291 1.10e-31 119
MS.gene068999.t1 AT2G31110 32.759 232 131 6 61 292 6 212 1.53e-30 114
MS.gene068999.t1 AT5G20680 29.904 311 176 11 2 294 171 457 4.03e-30 118
MS.gene068999.t1 AT5G19160 34.946 186 116 1 2 182 151 336 4.35e-30 116
MS.gene068999.t1 AT5G20680 29.904 311 176 11 2 294 247 533 7.45e-30 118
MS.gene068999.t1 AT5G20680 29.904 311 176 11 2 294 265 551 8.24e-30 118
MS.gene068999.t1 AT5G20680 29.904 311 176 11 2 294 265 551 8.24e-30 118
MS.gene068999.t1 AT5G20680 29.904 311 176 11 2 294 265 551 8.24e-30 118
MS.gene068999.t1 AT5G20680 29.904 311 176 11 2 294 265 551 8.24e-30 118
MS.gene068999.t1 AT3G06080 35.450 189 111 4 2 182 155 340 4.85e-28 111
MS.gene068999.t1 AT3G62390 32.432 185 118 3 4 183 192 374 2.61e-26 107
MS.gene068999.t1 AT5G06230 30.890 191 125 2 2 186 120 309 1.82e-24 100
MS.gene068999.t1 AT3G02440 27.597 308 196 9 2 297 187 479 5.67e-24 101
MS.gene068999.t1 AT3G02440 27.597 308 196 9 2 297 179 471 5.75e-24 101
MS.gene068999.t1 AT5G64020 26.752 314 194 12 2 294 110 408 8.37e-24 100
MS.gene068999.t1 AT2G37720 26.032 315 183 13 2 294 196 482 1.77e-23 100
MS.gene068999.t1 AT1G01430 26.433 314 199 14 2 297 151 450 2.34e-23 99.8
MS.gene068999.t1 AT4G11090 25.402 311 201 12 2 296 132 427 6.35e-23 98.2
MS.gene068999.t1 AT4G23790 26.198 313 200 13 1 296 131 429 1.48e-22 97.1
MS.gene068999.t1 AT2G30900 31.214 173 110 4 2 173 95 259 5.15e-22 93.6
MS.gene068999.t1 AT5G15890 26.861 309 177 13 2 290 239 518 1.33e-21 95.1
MS.gene068999.t1 AT5G20590 31.053 190 117 4 2 182 194 378 5.11e-21 92.4
MS.gene068999.t1 AT1G70230 26.230 305 181 12 2 290 131 407 5.74e-21 92.4
MS.gene068999.t1 AT5G64470 25.240 313 195 11 2 295 109 401 1.23e-20 91.7
MS.gene068999.t1 AT2G14530 24.601 313 194 11 2 294 116 406 2.64e-20 90.5
MS.gene068999.t1 AT5G64470 24.839 310 194 12 2 295 109 395 3.21e-20 90.1
MS.gene068999.t1 AT5G15900 25.163 306 199 9 2 294 121 409 4.41e-19 87.0
MS.gene068999.t1 AT5G15900 25.163 306 199 9 2 294 140 428 4.64e-19 87.4
MS.gene068999.t1 AT4G25360 25.776 322 186 14 2 294 227 524 1.08e-18 86.7
MS.gene068999.t1 AT4G25360 25.776 322 186 14 2 294 227 524 1.08e-18 86.7
MS.gene068999.t1 AT4G01080 25.000 308 202 11 2 297 143 433 3.13e-18 84.7
MS.gene068999.t1 AT3G28150 22.801 307 205 10 2 294 122 410 9.70e-17 80.5
MS.gene068999.t1 AT2G31110 27.326 172 116 3 2 173 97 259 2.35e-16 77.8
MS.gene068999.t1 AT5G51640 22.684 313 208 11 2 294 190 488 6.83e-16 78.2

Find 78 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTTTGACTCTACTAATAA+TGG 0.255577 7.2:+33576761 None:intergenic
TCAGGTACTCTATGGTTTAC+TGG 0.256231 7.2:+33576731 None:intergenic
ACATGCAGGTGGGGATCATT+TGG 0.283960 7.2:-33575845 MS.gene068999:intron
GATATCTGTTCTTGAGTTAG+AGG 0.287791 7.2:+33574269 None:intergenic
TAGAGGTCAATGGGTTTCTA+TGG 0.299683 7.2:-33577181 MS.gene068999:CDS
TTATTATTTCTATGTTAAAA+AGG 0.306744 7.2:-33577272 None:intergenic
CAGTCCTTTCAGGTACTCTA+TGG 0.309661 7.2:+33576723 None:intergenic
TTGATTCTAACAGTCCTTTC+AGG 0.311566 7.2:+33576713 None:intergenic
CACTGTTTCCTATAGATAGA+AGG 0.314814 7.2:+33574296 None:intergenic
TTGTTATTGATTGAAAATAT+AGG 0.319949 7.2:+33574169 None:intergenic
AGTTTGACTCTACTAATAAT+GGG 0.352635 7.2:+33576762 None:intergenic
CATGCAGGTGGGGATCATTT+GGG 0.353812 7.2:-33575844 MS.gene068999:intron
TGCAATCTGCATAACCATTC+GGG 0.362112 7.2:+33574243 None:intergenic
CTTGATGATTTGAAAACAAA+AGG 0.371379 7.2:-33574377 MS.gene068999:CDS
GATCATTTGGGGACCCAAAT+GGG 0.374672 7.2:-33575832 MS.gene068999:CDS
TGAGGAATGGGGAGCTACTA+AGG 0.380204 7.2:-33574495 MS.gene068999:CDS
TTGAAAAGCATGCAAGGTAT+TGG 0.405338 7.2:-33576685 MS.gene068999:CDS
ATGCAACCATTGAGAACTAT+TGG 0.405935 7.2:-33576787 MS.gene068999:CDS
AAGGCCACCCTTCTATCTAT+AGG 0.413695 7.2:-33574304 MS.gene068999:CDS
AATTTGCAGGGCTGAGGAAT+GGG 0.417000 7.2:-33574507 MS.gene068999:intron
GAACAAGAGGCTTGTGTTTG+TGG 0.422872 7.2:-33577217 MS.gene068999:CDS
TTCACTCAATAGAGGTCAAT+GGG 0.440231 7.2:-33577190 MS.gene068999:CDS
GAAAATGTTTAGTGAACCAT+TGG 0.442625 7.2:+33577104 None:intergenic
GGTTTATAAAAGAGTTGAAA+TGG 0.444078 7.2:-33575810 MS.gene068999:CDS
AACAAGAGGCTTGTGTTTGT+GGG 0.446081 7.2:-33577216 MS.gene068999:CDS
ATGCAATCTGCATAACCATT+CGG 0.447367 7.2:+33574242 None:intergenic
GGATCATTTGGGGACCCAAA+TGG 0.449625 7.2:-33575833 MS.gene068999:CDS
TGCATACATTGGTGCTTACC+AGG 0.452440 7.2:-33574224 MS.gene068999:CDS
ACTTACAGAACATTCATAAG+AGG 0.458497 7.2:+33576614 None:intergenic
TGCATGGATTTGAGAGATGA+AGG 0.462055 7.2:+33577135 None:intergenic
AGAAGCTCATTCCATACATC+AGG 0.467521 7.2:+33574197 None:intergenic
ATCATTTGGGGACCCAAATG+GGG 0.469819 7.2:-33575831 MS.gene068999:CDS
TACCAGGTGTTCCTGATGTA+TGG 0.478432 7.2:-33574208 MS.gene068999:CDS
CTATGAGGACATGGTCTGAT+TGG 0.478542 7.2:-33575769 MS.gene068999:CDS
ACAGATATGATTGCAAAAGA+AGG 0.492226 7.2:-33574452 MS.gene068999:CDS
CTCTCAGAATACAGAAAAGA+AGG 0.494842 7.2:-33574323 MS.gene068999:CDS
GTTTAGTGAACCATTGGCAA+TGG 0.497285 7.2:+33577110 None:intergenic
TAATTTGCAGGGCTGAGGAA+TGG 0.512945 7.2:-33574508 MS.gene068999:intron
ACACTTACCTTTGGTGGAGA+AGG 0.513975 7.2:-33576637 MS.gene068999:CDS
ATTCACTCAATAGAGGTCAA+TGG 0.517136 7.2:-33577191 MS.gene068999:CDS
AAGTATAATTTGCAGGGCTG+AGG 0.522607 7.2:-33574513 MS.gene068999:intron
GAGGACATGGTCTGATTGGT+TGG 0.529092 7.2:-33575765 MS.gene068999:CDS
AAAGAAGGGTATCAAGGAAA+GGG 0.529882 7.2:-33574437 MS.gene068999:CDS
TGTGTATACCTTTCATGAGT+AGG 0.530535 7.2:+33575692 None:intergenic
ATTGCAAAAGAAGGGTATCA+AGG 0.533588 7.2:-33574443 MS.gene068999:CDS
ATGCCACAGCATTACTTGAA+AGG 0.547632 7.2:-33577245 MS.gene068999:CDS
ACCATTGGCAATGGATTGCA+TGG 0.548704 7.2:+33577119 None:intergenic
TTGAAAGGCTAAGGAACAAG+AGG 0.552120 7.2:-33577230 MS.gene068999:CDS
CAAGAGGCTTGTGTTTGTGG+GGG 0.555862 7.2:-33577214 MS.gene068999:CDS
CAGATATGATTGCAAAAGAA+GGG 0.560977 7.2:-33574451 MS.gene068999:CDS
CAGCATTACTTGAAAGGCTA+AGG 0.562230 7.2:-33577239 MS.gene068999:CDS
ACTGTTTCCTATAGATAGAA+GGG 0.576762 7.2:+33574297 None:intergenic
GAGGAATGGGGAGCTACTAA+GGG 0.580536 7.2:-33574494 MS.gene068999:CDS
AAAAGAAGGGTATCAAGGAA+AGG 0.580780 7.2:-33574438 MS.gene068999:CDS
TTCCATACATCAGGAACACC+TGG 0.582782 7.2:+33574206 None:intergenic
TGGGGACCAATAGTTCTCAA+TGG 0.584156 7.2:+33576781 None:intergenic
ATGCAGGTGGGGATCATTTG+GGG 0.594080 7.2:-33575843 MS.gene068999:intron
ATTTGCAGGGCTGAGGAATG+GGG 0.594103 7.2:-33574506 MS.gene068999:intron
ACAAGAGGCTTGTGTTTGTG+GGG 0.597788 7.2:-33577215 MS.gene068999:CDS
CTTCTATCTATAGGAAACAG+TGG 0.602314 7.2:-33574295 MS.gene068999:CDS
AGTCCATTGAAAAGCATGCA+AGG 0.607245 7.2:-33576691 MS.gene068999:CDS
TAGCCTTTCAAGTAATGCTG+TGG 0.614673 7.2:+33577242 None:intergenic
AATGATGCAAGTGGTGGAGA+AGG 0.616843 7.2:-33574402 MS.gene068999:CDS
GCATGTCACCTACTCATGAA+AGG 0.617069 7.2:-33575700 MS.gene068999:intron
AATGGTGAGAGTGTACGAAA+TGG 0.619795 7.2:-33575792 MS.gene068999:CDS
ACGAAATGGCTATGAGGACA+TGG 0.621564 7.2:-33575778 MS.gene068999:CDS
TAAGAGGCCTTCTCCACCAA+AGG 0.624220 7.2:+33576630 None:intergenic
TCCATGCAATCCATTGCCAA+TGG 0.629782 7.2:-33577120 MS.gene068999:CDS
GAGTGTACGAAATGGCTATG+AGG 0.639835 7.2:-33575784 MS.gene068999:CDS
TTCTATCTATAGGAAACAGT+GGG 0.641890 7.2:-33574294 MS.gene068999:CDS
GAACAGATATCAAACCCGAA+TGG 0.655598 7.2:-33574257 MS.gene068999:CDS
CCCTAAAATGATGCAAGTGG+TGG 0.656447 7.2:-33574408 MS.gene068999:CDS
GTTATGCAGATTGCATACAT+TGG 0.659649 7.2:-33574235 MS.gene068999:CDS
TAAACCATAGAGTACCTGAA+AGG 0.660175 7.2:-33576727 MS.gene068999:CDS
GTTTGACTCTACTAATAATG+GGG 0.669584 7.2:+33576763 None:intergenic
GTTTCCTATAGATAGAAGGG+TGG 0.697662 7.2:+33574300 None:intergenic
AAGGTATTATAGAGTCAACA+AGG 0.699165 7.2:+33577154 None:intergenic
TGACCCTAAAATGATGCAAG+TGG 0.701266 7.2:-33574411 MS.gene068999:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAGTTAAAGAAAAT+TGG + chr7.2:33576192-33576211 None:intergenic 10.0%
!! ATATAGTAATCTATGTAATA+TGG + chr7.2:33576361-33576380 None:intergenic 15.0%
!!! GATTTTCTCAAAAAAAAAAA+AGG - chr7.2:33576495-33576514 MS.gene068999:intron 15.0%
!!! TCTATTTTTCTTTTATTTTG+TGG + chr7.2:33575970-33575989 None:intergenic 15.0%
!!! TTTTAGAAAATCACATATTT+CGG + chr7.2:33574485-33574504 None:intergenic 15.0%
!! AGTAAATTAGATAAACTTAG+TGG - chr7.2:33574555-33574574 MS.gene068999:intron 20.0%
!! ATCATAATCAATTTGTAAAG+TGG + chr7.2:33575550-33575569 None:intergenic 20.0%
!! ATCTAATTCATTTCTCAAAT+TGG + chr7.2:33575489-33575508 None:intergenic 20.0%
!! TATTTGTGTAAAATTCGATT+GGG + chr7.2:33576073-33576092 None:intergenic 20.0%
!! TCTAATTCATTTCTCAAATT+GGG + chr7.2:33575488-33575507 None:intergenic 20.0%
!! TTAATTGACACATTTAATCA+AGG - chr7.2:33574617-33574636 MS.gene068999:intron 20.0%
!! TTATTTGTGTAAAATTCGAT+TGG + chr7.2:33576074-33576093 None:intergenic 20.0%
!! TTCTCAAAAAAAAAAAAGGT+TGG - chr7.2:33576499-33576518 MS.gene068999:intron 20.0%
!! TTGAAATATTATGTTGCTAA+TGG - chr7.2:33574590-33574609 MS.gene068999:intron 20.0%
!! TTTACACAAATAATTGATCA+GGG - chr7.2:33576081-33576100 MS.gene068999:intron 20.0%
!! TTTCATTGAATTTAACCATT+TGG - chr7.2:33576430-33576449 MS.gene068999:intron 20.0%
!!! AAAAAAAAAAAAGGTTGGTT+GGG - chr7.2:33576504-33576523 MS.gene068999:intron 20.0%
!!! ACATTTTTTACACTTTTAAG+AGG - chr7.2:33574997-33575016 MS.gene068999:intron 20.0%
!!! AGAAAAAAGTATAATTTGCA+GGG - chr7.2:33576914-33576933 MS.gene068999:intron 20.0%
!!! AGTGATATTTTTTTCTTGAA+AGG - chr7.2:33576651-33576670 MS.gene068999:CDS 20.0%
!!! ATTTTTCTTTTATTTTGTGG+TGG + chr7.2:33575967-33575986 None:intergenic 20.0%
!!! GTGATATTTTTTTCTTGAAA+GGG - chr7.2:33576652-33576671 MS.gene068999:CDS 20.0%
!!! TACTATATAGCTTTAATCTT+TGG - chr7.2:33576373-33576392 MS.gene068999:intron 20.0%
!!! TAGAAAAAAGTATAATTTGC+AGG - chr7.2:33576913-33576932 MS.gene068999:intron 20.0%
!!! TCTAAAAATTTTAACTGTGT+CGG - chr7.2:33574498-33574517 MS.gene068999:CDS 20.0%
!!! TTTTACACAAATAATTGATC+AGG - chr7.2:33576080-33576099 MS.gene068999:intron 20.0%
! AATATTATGTTGCTAATGGT+TGG - chr7.2:33574594-33574613 MS.gene068999:intron 25.0%
! AATTATGATAGTTGCTCTTT+AGG + chr7.2:33576135-33576154 None:intergenic 25.0%
! AGTTTGACTCTACTAATAAT+GGG + chr7.2:33574674-33574693 None:intergenic 25.0%
! ATACTCATGAAATTTCATGT+TGG + chr7.2:33575317-33575336 None:intergenic 25.0%
! ATCTAATTTACTATGAAGCA+CGG + chr7.2:33574547-33574566 None:intergenic 25.0%
! ATTGAATTTAACCATTTGGA+TGG - chr7.2:33576434-33576453 MS.gene068999:intron 25.0%
! GAAATATAGGATTAGGTAAT+TGG - chr7.2:33575160-33575179 MS.gene068999:intron 25.0%
! GGTATTAGAAATATAGGATT+AGG - chr7.2:33575153-33575172 MS.gene068999:intron 25.0%
! GGTTTATAAAAGAGTTGAAA+TGG - chr7.2:33575623-33575642 MS.gene068999:intron 25.0%
! TACACTTGTAACATATTCAA+TGG - chr7.2:33576867-33576886 MS.gene068999:intron 25.0%
! TATAAATTAGCTATGAAGCA+CGG - chr7.2:33574397-33574416 MS.gene068999:CDS 25.0%
! TTACACAAATAATTGATCAG+GGG - chr7.2:33576082-33576101 MS.gene068999:intron 25.0%
! TTAGTCGGTATTAGAAATAT+AGG - chr7.2:33575147-33575166 MS.gene068999:intron 25.0%
! TTCTACATCCTTCAAATTAT+AGG + chr7.2:33575458-33575477 None:intergenic 25.0%
! TTGAATTTAACCATTTGGAT+GGG - chr7.2:33576435-33576454 MS.gene068999:intron 25.0%
!! AAAAAAAAAAAGGTTGGTTG+GGG - chr7.2:33576505-33576524 MS.gene068999:intron 25.0%
!! CAAAAAAAAAAAAGGTTGGT+TGG - chr7.2:33576503-33576522 MS.gene068999:intron 25.0%
!! CTTGATGATTTGAAAACAAA+AGG - chr7.2:33577056-33577075 MS.gene068999:intron 25.0%
!! TCACCTTTCTAAAAAAAAGT+CGG - chr7.2:33576034-33576053 MS.gene068999:intron 25.0%
!!! AATTTTAGTTAAACACATGC+AGG - chr7.2:33575574-33575593 MS.gene068999:intron 25.0%
!!! CATACGCTAATTAATTTGTT+TGG - chr7.2:33576302-33576321 MS.gene068999:intron 25.0%
!!! CTATCGATTATTTTGCTTAT+GGG - chr7.2:33576397-33576416 MS.gene068999:intron 25.0%
AAAACAAAGCCTTCAATTCA+GGG + chr7.2:33575908-33575927 None:intergenic 30.0%
AATTTGTAAAGTGGTTGCAT+GGG + chr7.2:33575541-33575560 None:intergenic 30.0%
ACAGATATGATTGCAAAAGA+AGG - chr7.2:33576981-33577000 MS.gene068999:intron 30.0%
ACTGTTTCCTATAGATAGAA+GGG + chr7.2:33577139-33577158 None:intergenic 30.0%
ACTTACAGAACATTCATAAG+AGG + chr7.2:33574822-33574841 None:intergenic 30.0%
AGCAATGTCCTATAATTTGA+AGG - chr7.2:33575447-33575466 MS.gene068999:intron 30.0%
AGGTATACACATATATCCAT+AGG - chr7.2:33575753-33575772 MS.gene068999:CDS 30.0%
ATCATATGGTGGTTGTAAAT+GGG + chr7.2:33574895-33574914 None:intergenic 30.0%
ATTAGATAAACTTAGTGGTC+AGG - chr7.2:33574560-33574579 MS.gene068999:intron 30.0%
CAGATATGATTGCAAAAGAA+GGG - chr7.2:33576982-33577001 MS.gene068999:intron 30.0%
CCATAAGCAAAATAATCGAT+AGG + chr7.2:33576399-33576418 None:intergenic 30.0%
GAAAATGTTTAGTGAACCAT+TGG + chr7.2:33574332-33574351 None:intergenic 30.0%
GACTCAATTTACTAATCGAA+AGG - chr7.2:33575356-33575375 MS.gene068999:intron 30.0%
GAGTTTGACTCTACTAATAA+TGG + chr7.2:33574675-33574694 None:intergenic 30.0%
GATCAATGAAAGTGATGTTT+GGG + chr7.2:33574853-33574872 None:intergenic 30.0%
GGTATACACATATATCCATA+GGG - chr7.2:33575754-33575773 MS.gene068999:CDS 30.0%
GTTTGACTCTACTAATAATG+GGG + chr7.2:33574673-33574692 None:intergenic 30.0%
TAAAGAAAATTGGTAGACGT+TGG + chr7.2:33576182-33576201 None:intergenic 30.0%
TACTTGTGGGATCAAAAAAA+GGG + chr7.2:33575796-33575815 None:intergenic 30.0%
TATCATATGGTGGTTGTAAA+TGG + chr7.2:33574896-33574915 None:intergenic 30.0%
TCAAAAAAAGGGAAACATGA+TGG + chr7.2:33575785-33575804 None:intergenic 30.0%
TGAATTTAACCATTTGGATG+GGG - chr7.2:33576436-33576455 MS.gene068999:intron 30.0%
TGAGAAAAACAGTGTTTACA+GGG - chr7.2:33576467-33576486 MS.gene068999:intron 30.0%
TGATCAATGAAAGTGATGTT+TGG + chr7.2:33574854-33574873 None:intergenic 30.0%
TTCTATCTATAGGAAACAGT+GGG - chr7.2:33577139-33577158 MS.gene068999:CDS 30.0%
! AAAAAAAAAAGGTTGGTTGG+GGG - chr7.2:33576506-33576525 MS.gene068999:intron 30.0%
! AAGGTATTATAGAGTCAACA+AGG + chr7.2:33574282-33574301 None:intergenic 30.0%
! ACTCTTTTATAAACCCCATT+TGG + chr7.2:33575618-33575637 None:intergenic 30.0%
! ATTTTATTCCCCTGAATTGA+AGG - chr7.2:33575896-33575915 MS.gene068999:intron 30.0%
! CTCTTTTATAAACCCCATTT+GGG + chr7.2:33575617-33575636 None:intergenic 30.0%
! TAGTTTTCAACACTTACCTT+TGG - chr7.2:33574787-33574806 MS.gene068999:intron 30.0%
! TATGTATCTTTTGCCATTGA+TGG + chr7.2:33576819-33576838 None:intergenic 30.0%
! TTCGGTGTAATTATATGTGT+CGG + chr7.2:33574467-33574486 None:intergenic 30.0%
! TTGCAACTTTTGTAAGAGTT+AGG - chr7.2:33575196-33575215 MS.gene068999:intron 30.0%
!! CCTATCGATTATTTTGCTTA+TGG - chr7.2:33576396-33576415 MS.gene068999:intron 30.0%
!! TTATTTTGTGGTGGCTAAAT+TGG + chr7.2:33575958-33575977 None:intergenic 30.0%
!! TTTTGCCATTGATGGATAAT+GGG + chr7.2:33576811-33576830 None:intergenic 30.0%
!!! CCAATCACATTTGTTTTAGT+CGG - chr7.2:33575132-33575151 MS.gene068999:intron 30.0%
AAACAAAGCCTTCAATTCAG+GGG + chr7.2:33575907-33575926 None:intergenic 35.0%
ACGCACACTAACATATCATA+TGG + chr7.2:33574909-33574928 None:intergenic 35.0%
ATGCAACCATTGAGAACTAT+TGG - chr7.2:33574646-33574665 MS.gene068999:intron 35.0%
ATGCAATCTGCATAACCATT+CGG + chr7.2:33577194-33577213 None:intergenic 35.0%
ATTCACTCAATAGAGGTCAA+TGG - chr7.2:33574242-33574261 MS.gene068999:CDS 35.0%
CAAAACAAAGCCTTCAATTC+AGG + chr7.2:33575909-33575928 None:intergenic 35.0%
CAATTTGTAAAGTGGTTGCA+TGG + chr7.2:33575542-33575561 None:intergenic 35.0%
CACACTAACATATCATATGG+TGG + chr7.2:33574906-33574925 None:intergenic 35.0%
CACTGTTTCCTATAGATAGA+AGG + chr7.2:33577140-33577159 None:intergenic 35.0%
CATATCCCATTATCCATCAA+TGG - chr7.2:33576803-33576822 MS.gene068999:intron 35.0%
CCGACTAAAACAAATGTGAT+TGG + chr7.2:33575135-33575154 None:intergenic 35.0%
CTACTTGTGGGATCAAAAAA+AGG + chr7.2:33575797-33575816 None:intergenic 35.0%
CTCTCAGAATACAGAAAAGA+AGG - chr7.2:33577110-33577129 MS.gene068999:CDS 35.0%
CTGAGAAAAACAGTGTTTAC+AGG - chr7.2:33576466-33576485 MS.gene068999:intron 35.0%
CTTCTATCTATAGGAAACAG+TGG - chr7.2:33577138-33577157 MS.gene068999:CDS 35.0%
GAATTTAACCATTTGGATGG+GGG - chr7.2:33576437-33576456 MS.gene068999:intron 35.0%
GAGAAAAACAGTGTTTACAG+GGG - chr7.2:33576468-33576487 MS.gene068999:intron 35.0%
GATATCTGTTCTTGAGTTAG+AGG + chr7.2:33577167-33577186 None:intergenic 35.0%
GTTATGCAGATTGCATACAT+TGG - chr7.2:33577198-33577217 MS.gene068999:CDS 35.0%
TATATGCTCAGACAAGTTAG+AGG - chr7.2:33575334-33575353 MS.gene068999:intron 35.0%
TGGTATCTGTTGCAAAACAT+TGG + chr7.2:33576341-33576360 None:intergenic 35.0%
TGTGTATACCTTTCATGAGT+AGG + chr7.2:33575744-33575763 None:intergenic 35.0%
TTAGTTAAACACATGCAGGT+GGG - chr7.2:33575578-33575597 MS.gene068999:intron 35.0%
TTCACTCAATAGAGGTCAAT+GGG - chr7.2:33574243-33574262 MS.gene068999:CDS 35.0%
TTGATTCTAACAGTCCTTTC+AGG + chr7.2:33574723-33574742 None:intergenic 35.0%
TTTACTATGAAGCACGGATA+CGG + chr7.2:33574541-33574560 None:intergenic 35.0%
TTTAGTTAAACACATGCAGG+TGG - chr7.2:33575577-33575596 MS.gene068999:intron 35.0%
! ATACCTTGCATGCTTTTCAA+TGG + chr7.2:33574748-33574767 None:intergenic 35.0%
! TAAACCATAGAGTACCTGAA+AGG - chr7.2:33574706-33574725 MS.gene068999:intron 35.0%
! TTGAAAAGCATGCAAGGTAT+TGG - chr7.2:33574748-33574767 MS.gene068999:intron 35.0%
! TTTTCAACACTTACCTTTGG+TGG - chr7.2:33574790-33574809 MS.gene068999:intron 35.0%
!! AAAAGAAGGGTATCAAGGAA+AGG - chr7.2:33576995-33577014 MS.gene068999:intron 35.0%
!! AAAGAAGGGTATCAAGGAAA+GGG - chr7.2:33576996-33577015 MS.gene068999:intron 35.0%
!! ATTGCAAAAGAAGGGTATCA+AGG - chr7.2:33576990-33577009 MS.gene068999:intron 35.0%
!! CTTTTGCCATTGATGGATAA+TGG + chr7.2:33576812-33576831 None:intergenic 35.0%
!!! CGACCGACTTTTTTTTAGAA+AGG + chr7.2:33576040-33576059 None:intergenic 35.0%
!!! CTGAATTGAAGGCTTTGTTT+TGG - chr7.2:33575907-33575926 MS.gene068999:intron 35.0%
AACAAGAGGCTTGTGTTTGT+GGG - chr7.2:33574217-33574236 MS.gene068999:CDS 40.0%
AGAAGCTCATTCCATACATC+AGG + chr7.2:33577239-33577258 None:intergenic 40.0%
ATGCCACAGCATTACTTGAA+AGG - chr7.2:33574188-33574207 MS.gene068999:CDS 40.0%
CAACTCATGCATCTACTTGT+GGG + chr7.2:33575809-33575828 None:intergenic 40.0%
CAGCATTACTTGAAAGGCTA+AGG - chr7.2:33574194-33574213 MS.gene068999:CDS 40.0%
CTAGTATGTGACAGTAGTTG+AGG - chr7.2:33574939-33574958 MS.gene068999:intron 40.0%
GAACAGATATCAAACCCGAA+TGG - chr7.2:33577176-33577195 MS.gene068999:CDS 40.0%
GTTTAGTGAACCATTGGCAA+TGG + chr7.2:33574326-33574345 None:intergenic 40.0%
GTTTCCTATAGATAGAAGGG+TGG + chr7.2:33577136-33577155 None:intergenic 40.0%
TAGTTAAACACATGCAGGTG+GGG - chr7.2:33575579-33575598 MS.gene068999:intron 40.0%
TATGAAGCACGGACACTATT+CGG - chr7.2:33574408-33574427 MS.gene068999:CDS 40.0%
TCAACTCATGCATCTACTTG+TGG + chr7.2:33575810-33575829 None:intergenic 40.0%
TCAGGTACTCTATGGTTTAC+TGG + chr7.2:33574705-33574724 None:intergenic 40.0%
TGACCCTAAAATGATGCAAG+TGG - chr7.2:33577022-33577041 MS.gene068999:intron 40.0%
TGCAATCTGCATAACCATTC+GGG + chr7.2:33577193-33577212 None:intergenic 40.0%
TGCATGGATTTGAGAGATGA+AGG + chr7.2:33574301-33574320 None:intergenic 40.0%
TTGAAAGGCTAAGGAACAAG+AGG - chr7.2:33574203-33574222 MS.gene068999:CDS 40.0%
! AAGTATAATTTGCAGGGCTG+AGG - chr7.2:33576920-33576939 MS.gene068999:intron 40.0%
! AATGGTGAGAGTGTACGAAA+TGG - chr7.2:33575641-33575660 MS.gene068999:intron 40.0%
! AGTCCATTGAAAAGCATGCA+AGG - chr7.2:33574742-33574761 MS.gene068999:intron 40.0%
! CCACCACTTGCATCATTTTA+GGG + chr7.2:33577028-33577047 None:intergenic 40.0%
! TAGAGGTCAATGGGTTTCTA+TGG - chr7.2:33574252-33574271 MS.gene068999:CDS 40.0%
! TAGCCTTTCAAGTAATGCTG+TGG + chr7.2:33574194-33574213 None:intergenic 40.0%
! TCCACCACTTGCATCATTTT+AGG + chr7.2:33577029-33577048 None:intergenic 40.0%
AAGGCCACCCTTCTATCTAT+AGG - chr7.2:33577129-33577148 MS.gene068999:CDS 45.0%
AATTTGCAGGGCTGAGGAAT+GGG - chr7.2:33576926-33576945 MS.gene068999:intron 45.0%
ACAAGAGGCTTGTGTTTGTG+GGG - chr7.2:33574218-33574237 MS.gene068999:CDS 45.0%
ACACTTACCTTTGGTGGAGA+AGG - chr7.2:33574796-33574815 MS.gene068999:intron 45.0%
ACGAAATGGCTATGAGGACA+TGG - chr7.2:33575655-33575674 MS.gene068999:intron 45.0%
ATCATTTGGGGACCCAAATG+GGG - chr7.2:33575602-33575621 MS.gene068999:intron 45.0%
ATGAAGCACGGATACGGATA+CGG + chr7.2:33574535-33574554 None:intergenic 45.0%
CCCTAAAATGATGCAAGTGG+TGG - chr7.2:33577025-33577044 MS.gene068999:intron 45.0%
CTATGAGGACATGGTCTGAT+TGG - chr7.2:33575664-33575683 MS.gene068999:intron 45.0%
GAACAAGAGGCTTGTGTTTG+TGG - chr7.2:33574216-33574235 MS.gene068999:CDS 45.0%
GAGTGTACGAAATGGCTATG+AGG - chr7.2:33575649-33575668 MS.gene068999:intron 45.0%
GATCATTTGGGGACCCAAAT+GGG - chr7.2:33575601-33575620 MS.gene068999:intron 45.0%
GCATGTCACCTACTCATGAA+AGG - chr7.2:33575733-33575752 MS.gene068999:CDS 45.0%
GTGACTAGACTTGAAGTGAC+TGG + chr7.2:33576587-33576606 None:intergenic 45.0%
TACCAGGTGTTCCTGATGTA+TGG - chr7.2:33577225-33577244 MS.gene068999:CDS 45.0%
TCCATGCAATCCATTGCCAA+TGG - chr7.2:33574313-33574332 MS.gene068999:CDS 45.0%
TGGGGACCAATAGTTCTCAA+TGG + chr7.2:33574655-33574674 None:intergenic 45.0%
TTCCATACATCAGGAACACC+TGG + chr7.2:33577230-33577249 None:intergenic 45.0%
! AAAAAAAGGTTGGTTGGGGG+AGG - chr7.2:33576509-33576528 MS.gene068999:intron 45.0%
! AATGATGCAAGTGGTGGAGA+AGG - chr7.2:33577031-33577050 MS.gene068999:intron 45.0%
! CAGTCCTTTCAGGTACTCTA+TGG + chr7.2:33574713-33574732 None:intergenic 45.0%
! TAATTTGCAGGGCTGAGGAA+TGG - chr7.2:33576925-33576944 MS.gene068999:intron 45.0%
! TGCATACATTGGTGCTTACC+AGG - chr7.2:33577209-33577228 MS.gene068999:CDS 45.0%
!! AACATGATGGACTTGCCCTA+TGG + chr7.2:33575772-33575791 None:intergenic 45.0%
!! ACCATTGGCAATGGATTGCA+TGG + chr7.2:33574317-33574336 None:intergenic 45.0%
!!! GAAGGCTTTGTTTTGGTCGA+TGG - chr7.2:33575914-33575933 MS.gene068999:intron 45.0%
!!! CAAATATAATAAAATTATTT+TGG + chr7.2:33575038-33575057 None:intergenic 5.0%
!!! TGTTAATTAATTTAATTTAT+CGG - chr7.2:33575845-33575864 MS.gene068999:intron 5.0%
ACATGCAGGTGGGGATCATT+TGG - chr7.2:33575588-33575607 MS.gene068999:intron 50.0%
ATGCAGGTGGGGATCATTTG+GGG - chr7.2:33575590-33575609 MS.gene068999:intron 50.0%
ATTTGCAGGGCTGAGGAATG+GGG - chr7.2:33576927-33576946 MS.gene068999:intron 50.0%
CAAGAGGCTTGTGTTTGTGG+GGG - chr7.2:33574219-33574238 MS.gene068999:CDS 50.0%
CATGCAGGTGGGGATCATTT+GGG - chr7.2:33575589-33575608 MS.gene068999:intron 50.0%
GAGGAATGGGGAGCTACTAA+GGG - chr7.2:33576939-33576958 MS.gene068999:intron 50.0%
GAGGACATGGTCTGATTGGT+TGG - chr7.2:33575668-33575687 MS.gene068999:intron 50.0%
GCACGGACACTATTCGGATA+AGG - chr7.2:33574414-33574433 MS.gene068999:CDS 50.0%
GGATCATTTGGGGACCCAAA+TGG - chr7.2:33575600-33575619 MS.gene068999:intron 50.0%
GTGGGGGATTCACTCAATAG+AGG - chr7.2:33574235-33574254 MS.gene068999:CDS 50.0%
TAAGAGGCCTTCTCCACCAA+AGG + chr7.2:33574806-33574825 None:intergenic 50.0%
TGAGGAATGGGGAGCTACTA+AGG - chr7.2:33576938-33576957 MS.gene068999:intron 50.0%
TTGGTTGGGGGAGGTAAAAG+TGG - chr7.2:33576518-33576537 MS.gene068999:intron 50.0%
! AGCGTTTTCCCCCATCCAAA+TGG + chr7.2:33576448-33576467 None:intergenic 50.0%
!!! GGCTTTGTTTTGGTCGATGG+TGG - chr7.2:33575917-33575936 MS.gene068999:intron 50.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 33574172 33577283 33574172 ID=MS.gene068999
chr7.2 mRNA 33574172 33577283 33574172 ID=MS.gene068999.t1;Parent=MS.gene068999
chr7.2 exon 33577095 33577283 33577095 ID=MS.gene068999.t1.exon1;Parent=MS.gene068999.t1
chr7.2 CDS 33577095 33577283 33577095 ID=cds.MS.gene068999.t1;Parent=MS.gene068999.t1
chr7.2 exon 33576620 33576816 33576620 ID=MS.gene068999.t1.exon2;Parent=MS.gene068999.t1
chr7.2 CDS 33576620 33576816 33576620 ID=cds.MS.gene068999.t1;Parent=MS.gene068999.t1
chr7.2 exon 33575701 33575859 33575701 ID=MS.gene068999.t1.exon3;Parent=MS.gene068999.t1
chr7.2 CDS 33575701 33575859 33575701 ID=cds.MS.gene068999.t1;Parent=MS.gene068999.t1
chr7.2 exon 33574172 33574520 33574172 ID=MS.gene068999.t1.exon4;Parent=MS.gene068999.t1
chr7.2 CDS 33574172 33574520 33574172 ID=cds.MS.gene068999.t1;Parent=MS.gene068999.t1
Gene Sequence

>MS.gene068999

ATGTTAAAAAGGTTCAATGCCACAGCATTACTTGAAAGGCTAAGGAACAAGAGGCTTGTGTTTGTGGGGGATTCACTCAATAGAGGTCAATGGGTTTCTATGGTTTGCCTTGTTGACTCTATAATACCTTCATCTCTCAAATCCATGCAATCCATTGCCAATGGTTCACTAAACATTTTCAAGATCAAAGTAAGACTTTTTGAAAAATATATTGAGCTCTTTGATTATAAATTAGCTATGAAGCACGGACACTATTCGGATAAGGCGATACGTGTCTGACACTGACACGACACCGACACATATAATTACACCGAAATATGTGATTTTCTAAAAATTTTAACTGTGTCGGCGTGTCAGTGTCCGTATCCGTATCCGTGCTTCATAGTAAATTAGATAAACTTAGTGGTCAGGATATTATTTGAAATATTATGTTGCTAATGGTTGGTTAATTGACACATTTAATCAAGGAATACAATGCAACCATTGAGAACTATTGGTCCCCATTATTAGTAGAGTCAAACTCAGATGATCCAGTAAACCATAGAGTACCTGAAAGGACTGTTAGAATCAAGTCCATTGAAAAGCATGCAAGGTATTGGACAGATGCAGATTATATAGTTTTCAACACTTACCTTTGGTGGAGAAGGCCTCTTATGAATGTTCTGTAAGTTCAATTAACCCAAACATCACTTTCATTGATCAACTAGCATGTCAACAACTCCCATTTACAACCACCATATGATATGTTAGTGTGCGTCTATAAAAAACTAGTATGTGACAGTAGTTGAGGAAACAAAAAGTAAACTTTTTACTATATCGAAAAGAACATTTTTTACACTTTTAAGAGGTTGACTACATCAGTTCCAAAATAATTTTATTATATTTGATTCTTTAACAAATGCTTTATGAGCACTTGTTAGCATTTTTCAATTTAAAAATAATCTTTATTTTTAAAAAGTTCCAATCACATTTGTTTTAGTCGGTATTAGAAATATAGGATTAGGTAATTGGTTAGATGAGTTAGTTGCAACTTTTGTAAGAGTTAGGAGTTGTTAGCAAGTAGTTAACTATTCACAAGCTCTATATATAGAGCATGATGTATTCATTTTACACAATATTTTCAATTAATTTATTATGTTTTTCCAACATGAAATTTCATGAGTATATGCTCAGACAAGTTAGAGGACTCAATTTACTAATCGAAAGGATTAATATGAAAAAAAAACTCACTTTAAAAGATTATTTTAAAATGTTTACAATTTCATAGACTAAATTAGCAATGTCCTATAATTTGAAGGATGTAGAATGCATGTCCCAATTTGAGAAATGAATTAGATCATTTATTCTATAAACTTTCATATTTTATCCCATGCAACCACTTTACAAATTGATTATGATTGAGAATTTTAGTTAAACACATGCAGGTGGGGATCATTTGGGGACCCAAATGGGGTTTATAAAAGAGTTGAAATGGTGAGAGTGTACGAAATGGCTATGAGGACATGGTCTGATTGGTTGGAAGTTCATGTCAATCGTAACAAGACTCAGTTGTTTTTTGTTAGCATGTCACCTACTCATGAAAGGTATACACATATATCCATAGGGCAAGTCCATCATGTTTCCCTTTTTTTGATCCCACAAGTAGATGCATGAGTTGAATAGTTCACAAATCATGTTAATTAATTTAATTTATCGGAAAAAGATATCAATTTATTCTTTTGACAATTTTATTCCCCTGAATTGAAGGCTTTGTTTTGGTCGATGGTGGCATTCTTTGTCTCATCCAATTTAGCCACCACAAAATAAAAGAAAAATAGAGAGAATGACATTTGAAAATTGCTCTTTAGACACTTCAAAATTGTTCACCTTTCTAAAAAAAAGTCGGTCGAAAGTTATGACCCAATCGAATTTTACACAAATAATTGATCAGGGGTTACGACTCGAAAGCGAATTTGAGATGCCTAAAGAGCAACTATCATAATTAGCTCAAACAAACAAATATTATATCCAACGTCTACCAATTTTCTTTAACTTATTTTTCGAAATCAAATTTCACATAATTCTGTGTTTGTTGAATTAAGTTTTAGACAAGCGAACATAGTTGATTTCATGTAATAATATTTACATACACATACGCTAATTAATTTGTTTGGAAGAAGATTTCTTCCAATGTTTTGCAACAGATACCATATTACATAGATTACTATATAGCTTTAATCTTTGGCCTATCGATTATTTTGCTTATGGGCAACAAAAGTTTTCATTGAATTTAACCATTTGGATGGGGGAAAACGCTGAGAAAAACAGTGTTTACAGGGGTGTAGATTTTCTCAAAAAAAAAAAAGGTTGGTTGGGGGAGGTAAAAGTGGCTCTCTTTAAGATGCAAATCACATAATCTGTATTCAATAATGACCAGTCACTTCAAGTCTAGTCACATTTAAGCAATATGTACTTATAAGTCATATGATATCTAACTAGAAGTGATATTTTTTTCTTGAAAGGGTCTAGAAGTGATAATTGATTATGCATTAAAATACATGCATTAAATTCAAATCAAATCTAAGTTATTCAAGAAAAGTGTTTTGAAAAATTGAAATACATGCATCAAATTCAAATCAAACTAGTATTGTGCATATCCCATTATCCATCAATGGCAAAAGATACATATCAGTACATTAGTACAAAGCAAAAAGTCTACACTTGTAACATATTCAATGGATATAAACACAATAGATTTGTAATAGAAAAAAGTATAATTTGCAGGGCTGAGGAATGGGGAGCTACTAAGGGTGACACTTGTTACAAAGAAACAGATATGATTGCAAAAGAAGGGTATCAAGGAAAGGGAACTGACCCTAAAATGATGCAAGTGGTGGAGAAGGTGCTTGATGATTTGAAAACAAAAGGTTTAAATGTTCAAATGCTTAACATTACACAACTCTCAGAATACAGAAAAGAAGGCCACCCTTCTATCTATAGGAAACAGTGGGAACCTCTAACTCAAGAACAGATATCAAACCCGAATGGTTATGCAGATTGCATACATTGGTGCTTACCAGGTGTTCCTGATGTATGGAATGAGCTTCTTTATGCCTATATTTTCAATCAATAA
Protein sequence

>MS.gene068999.t1

MLKRFNATALLERLRNKRLVFVGDSLNRGQWVSMVCLVDSIIPSSLKSMQSIANGSLNIFKIKEYNATIENYWSPLLVESNSDDPVNHRVPERTVRIKSIEKHARYWTDADYIVFNTYLWWRRPLMNVLWGSFGDPNGVYKRVEMVRVYEMAMRTWSDWLEVHVNRNKTQLFFVSMSPTHERAEEWGATKGDTCYKETDMIAKEGYQGKGTDPKMMQVVEKVLDDLKTKGLNVQMLNITQLSEYRKEGHPSIYRKQWEPLTQEQISNPNGYADCIHWCLPGVPDVWNELLYAYIFNQ