Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069085.t1 | XP_003611972.1 | 97.1 | 487 | 14 | 0 | 1 | 487 | 1 | 487 | 3.60E-257 | 897.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069085.t1 | O23215 | 72.8 | 437 | 101 | 7 | 1 | 428 | 1 | 428 | 8.8e-164 | 578.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069085.t1 | G7KC98 | 97.1 | 487 | 14 | 0 | 1 | 487 | 1 | 487 | 2.6e-257 | 897.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05904 | MS.gene069085 | 0.811498 | 6.79E-51 | -1.69E-46 |
| MS.gene059872 | MS.gene069085 | 0.807755 | 4.33E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069085.t1 | MTR_5g019910 | 98.152 | 487 | 9 | 0 | 1 | 487 | 1 | 487 | 0.0 | 987 |
| MS.gene069085.t1 | MTR_7g091230 | 34.184 | 196 | 121 | 4 | 134 | 323 | 108 | 301 | 5.35e-21 | 94.0 |
| MS.gene069085.t1 | MTR_3g040300 | 33.333 | 195 | 121 | 4 | 136 | 323 | 66 | 258 | 4.74e-20 | 90.5 |
| MS.gene069085.t1 | MTR_3g037190 | 32.653 | 196 | 124 | 4 | 134 | 323 | 108 | 301 | 1.47e-19 | 89.7 |
| MS.gene069085.t1 | MTR_1g053065 | 28.339 | 307 | 184 | 12 | 23 | 323 | 24 | 300 | 1.56e-19 | 89.7 |
| MS.gene069085.t1 | MTR_3g040150 | 32.243 | 214 | 131 | 6 | 117 | 323 | 90 | 296 | 5.26e-19 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069085.t1 | AT4G36650 | 87.240 | 337 | 36 | 3 | 1 | 334 | 1 | 333 | 0.0 | 587 |
| MS.gene069085.t1 | AT4G36650 | 73.600 | 375 | 79 | 6 | 1 | 363 | 1 | 367 | 0.0 | 521 |
| MS.gene069085.t1 | AT2G41630 | 35.678 | 199 | 117 | 5 | 132 | 323 | 106 | 300 | 1.07e-23 | 101 |
| MS.gene069085.t1 | AT3G10330 | 34.328 | 201 | 113 | 6 | 134 | 323 | 108 | 300 | 2.81e-21 | 94.7 |
Find 134 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAATTCATTTCAGTATTC+TGG | 0.159062 | 5.3:-11370457 | None:intergenic |
| GATTGCAAGTGTCGAATATT+TGG | 0.233569 | 5.3:-11370412 | None:intergenic |
| CTCAGCTGCCGCCATATATT+TGG | 0.241130 | 5.3:+11369820 | MS.gene069085:CDS |
| CCCACAACCTTAATTGCTTC+TGG | 0.251621 | 5.3:+11370004 | MS.gene069085:CDS |
| ACCAGTTACTTTGCAAATTT+CGG | 0.256850 | 5.3:-11369876 | None:intergenic |
| AATATAACCTGAAGGGTTCT+AGG | 0.270602 | 5.3:-11367505 | None:intergenic |
| TATAGAGGTTACTTCTTCTT+TGG | 0.274158 | 5.3:+11370054 | MS.gene069085:CDS |
| GATATAGAATTGCTGTTAAT+AGG | 0.275872 | 5.3:-11369252 | None:intergenic |
| GTCTTCTTCTTCGTTGGTTT+CGG | 0.282449 | 5.3:-11367140 | None:intergenic |
| TGCTACTGCTGCTCTTGTTC+AGG | 0.283370 | 5.3:+11367462 | MS.gene069085:CDS |
| CCTTGCGCCGCTGAACAGTA+TGG | 0.285793 | 5.3:-11366944 | None:intergenic |
| GTAATTCTTTATACACTTTA+CGG | 0.287548 | 5.3:-11369916 | None:intergenic |
| GTGTTGTTGTTGATAATCTT+AGG | 0.297419 | 5.3:+11367311 | MS.gene069085:CDS |
| AGAACGTCCAGAAGCAATTA+AGG | 0.300940 | 5.3:-11370011 | None:intergenic |
| CGGGAAATACATCAAGATAC+TGG | 0.318001 | 5.3:+11369206 | MS.gene069085:CDS |
| GCGGCAGCTGAGATGCTAAT+TGG | 0.320894 | 5.3:-11369809 | None:intergenic |
| CTGCTACTTGTTTGAGAAAT+CGG | 0.322311 | 5.3:+11367425 | MS.gene069085:CDS |
| CTCTGTTATGAGGTCGCTTT+CGG | 0.324574 | 5.3:+11370369 | MS.gene069085:CDS |
| ATAAAGAATTACTGGAGAAT+TGG | 0.329959 | 5.3:+11369927 | MS.gene069085:CDS |
| GTGACCTCTACCATGGGTTC+AGG | 0.330609 | 5.3:-11370277 | None:intergenic |
| GTAAAGCGGGCTGGGCTCTA+AGG | 0.334203 | 5.3:-11367206 | None:intergenic |
| TAAAGTGTATAAAGAATTAC+TGG | 0.348175 | 5.3:+11369919 | MS.gene069085:CDS |
| GGTTTGTTTGGTTTAAATTC+CGG | 0.356896 | 5.3:-11370091 | None:intergenic |
| CTATTCAGCAGTCAACGTTT+TGG | 0.357039 | 5.3:+11370161 | MS.gene069085:CDS |
| TTGGTTTGGTTGAGAGTGGG+GGG | 0.359289 | 5.3:-11367115 | None:intergenic |
| CTACCATGGGTTCAGGTTGT+TGG | 0.366695 | 5.3:-11370270 | None:intergenic |
| TTCTTCGTTGGTTTCGGTGT+TGG | 0.368521 | 5.3:-11367134 | None:intergenic |
| GCCCGCTCCGGAGGAACAGC+TGG | 0.371273 | 5.3:-11369977 | None:intergenic |
| TAAAGAATTACTGGAGAATT+GGG | 0.376158 | 5.3:+11369928 | MS.gene069085:CDS |
| TCGGCCTCATTAGGTTTGTT+TGG | 0.386243 | 5.3:-11370103 | None:intergenic |
| TCCATTGAATCTAAAACATT+CGG | 0.388238 | 5.3:-11370223 | None:intergenic |
| TTTGGATTCAGAAAATTTGC+CGG | 0.392454 | 5.3:+11370072 | MS.gene069085:CDS |
| CGTTGGTTTCGGTGTTGGTT+TGG | 0.400396 | 5.3:-11367129 | None:intergenic |
| GTGTTGGTTTGGTTGAGAGT+GGG | 0.400909 | 5.3:-11367118 | None:intergenic |
| GCCGAAATTTGCAAAGTAAC+TGG | 0.401723 | 5.3:+11369875 | MS.gene069085:CDS |
| TTTGGGTCGCACTGGGAAGT+TGG | 0.408622 | 5.3:-11370189 | None:intergenic |
| TCAAGAACCTAGAACCCTTC+AGG | 0.414329 | 5.3:+11367498 | MS.gene069085:CDS |
| AATGTGGCACAAAAGGAAAT+CGG | 0.414393 | 5.3:+11369186 | MS.gene069085:CDS |
| TGCCGCCAATGTGGCACAAA+AGG | 0.415436 | 5.3:+11369179 | MS.gene069085:CDS |
| TTGGGTCGCACTGGGAAGTT+GGG | 0.415514 | 5.3:-11370188 | None:intergenic |
| TTAGATTCAATGGATATTGA+TGG | 0.416703 | 5.3:+11370232 | MS.gene069085:CDS |
| GAATGGGTCTTCTTCTTCGT+TGG | 0.417262 | 5.3:-11367146 | None:intergenic |
| AACAGCTGGGGTGTAATTAG+AGG | 0.420498 | 5.3:-11369963 | None:intergenic |
| ATAGATGTTTCGTCGATACT+TGG | 0.424209 | 5.3:+11367349 | MS.gene069085:CDS |
| ATGAAGCCCGTGGGCTCGAA+TGG | 0.428456 | 5.3:-11367163 | None:intergenic |
| TACTTTGCAAATTTCGGCCT+GGG | 0.429283 | 5.3:-11369870 | None:intergenic |
| TGGACGTTCTTCAACAACTA+AGG | 0.433325 | 5.3:+11370024 | MS.gene069085:CDS |
| TGAAGAAGGGTGCAAAATCT+TGG | 0.434378 | 5.3:-11369285 | None:intergenic |
| TGTTGTTGTTGATAATCTTA+GGG | 0.437061 | 5.3:+11367312 | MS.gene069085:CDS |
| CAGATTTATTGAGCTGAAGA+AGG | 0.440283 | 5.3:-11369299 | None:intergenic |
| TAGTTGGCAAGCCAAATATA+TGG | 0.445296 | 5.3:-11369831 | None:intergenic |
| GGTGTTGGTTTGGTTGAGAG+TGG | 0.447403 | 5.3:-11367119 | None:intergenic |
| ACTGCTGAATAGCCGATGAT+TGG | 0.448535 | 5.3:-11370150 | None:intergenic |
| CGAGACATAGGGGATTATCT+TGG | 0.451200 | 5.3:-11367075 | None:intergenic |
| TGTTGGTTTGGTTGAGAGTG+GGG | 0.456506 | 5.3:-11367117 | None:intergenic |
| TGTTTCGTCGATACTTGGAT+TGG | 0.463509 | 5.3:+11367354 | MS.gene069085:CDS |
| CCCAGCTGTTCCTCCGGAGC+GGG | 0.465744 | 5.3:+11369976 | MS.gene069085:CDS |
| GTTGGTTTGGTTGAGAGTGG+GGG | 0.466278 | 5.3:-11367116 | None:intergenic |
| AGATTGAAGGTAAAGCGGGC+TGG | 0.467976 | 5.3:-11367215 | None:intergenic |
| TCCAGAAGCAATTAAGGTTG+TGG | 0.468811 | 5.3:-11370005 | None:intergenic |
| GATTGAAGGTAAAGCGGGCT+GGG | 0.472239 | 5.3:-11367214 | None:intergenic |
| CCAGAAGCAATTAAGGTTGT+GGG | 0.478234 | 5.3:-11370004 | None:intergenic |
| CGGTGGTTGTTGTTGTGCAA+CGG | 0.480438 | 5.3:-11366967 | None:intergenic |
| GAGACATAGGGGATTATCTT+GGG | 0.484053 | 5.3:-11367074 | None:intergenic |
| TTACTTTGCAAATTTCGGCC+TGG | 0.486938 | 5.3:-11369871 | None:intergenic |
| AAGCAGGAGGACTGTAAAGT+TGG | 0.489113 | 5.3:-11370336 | None:intergenic |
| AACTAAGGTTGATGCTATAG+AGG | 0.490167 | 5.3:+11370039 | MS.gene069085:CDS |
| CCATGGGTTCAGGTTGTTGG+TGG | 0.491351 | 5.3:-11370267 | None:intergenic |
| TAGATTCAATGGATATTGAT+GGG | 0.494603 | 5.3:+11370233 | MS.gene069085:CDS |
| TTACACCCCAGCTGTTCCTC+CGG | 0.495785 | 5.3:+11369970 | MS.gene069085:CDS |
| CAATCGTCTAAGACAATGCC+TGG | 0.497496 | 5.3:+11370430 | MS.gene069085:CDS |
| GTCACAAATGGTGCTGGTAT+CGG | 0.500308 | 5.3:+11370295 | MS.gene069085:CDS |
| ATGTGGCACAAAAGGAAATC+GGG | 0.502560 | 5.3:+11369187 | MS.gene069085:CDS |
| CTTGCGCCGCTGAACAGTAT+GGG | 0.505019 | 5.3:-11366943 | None:intergenic |
| TGAAGCCCGTGGGCTCGAAT+GGG | 0.505489 | 5.3:-11367162 | None:intergenic |
| TTCCGCAAGGTATCCCGAAA+AGG | 0.505591 | 5.3:-11367245 | None:intergenic |
| CAAGTTCAAGCTCTGTTATG+AGG | 0.516513 | 5.3:+11370359 | MS.gene069085:CDS |
| TCAGCTCAATAAATCTGCTC+AGG | 0.517419 | 5.3:+11369305 | MS.gene069085:CDS |
| GATTATCTTGGGCGCGCAGG+TGG | 0.519878 | 5.3:-11367063 | None:intergenic |
| GGTGGAAGATGTGGTGAGGA+TGG | 0.522042 | 5.3:-11367045 | None:intergenic |
| GGGGATTATCTTGGGCGCGC+AGG | 0.527359 | 5.3:-11367066 | None:intergenic |
| GATCTGGTGTGACGAGACAT+AGG | 0.527875 | 5.3:-11367087 | None:intergenic |
| GTGGAAGATGTGGTGAGGAT+GGG | 0.528792 | 5.3:-11367044 | None:intergenic |
| CCCGCTCCGGAGGAACAGCT+GGG | 0.534028 | 5.3:-11369976 | None:intergenic |
| AAAAGGAGAGGGAAGATTGA+AGG | 0.535379 | 5.3:-11367228 | None:intergenic |
| TCATAACCGCTTTCTCAACA+TGG | 0.537661 | 5.3:+11367182 | MS.gene069085:CDS |
| ACAAATGCTTCTGCACTCGC+AGG | 0.542085 | 5.3:+11369783 | MS.gene069085:CDS |
| TAAACCAAACAAACCTAATG+AGG | 0.542847 | 5.3:+11370099 | MS.gene069085:CDS |
| CCATACTGTTCAGCGGCGCA+AGG | 0.542989 | 5.3:+11366944 | MS.gene069085:CDS |
| GTGGGAAATGCCCGCTCCGG+AGG | 0.547290 | 5.3:-11369986 | None:intergenic |
| TTTCAGTATTCTGGAAAACC+AGG | 0.547759 | 5.3:-11370448 | None:intergenic |
| GTTGTGGGAAATGCCCGCTC+CGG | 0.551336 | 5.3:-11369989 | None:intergenic |
| TGCTCGTGCAAGCCAATCAT+CGG | 0.551744 | 5.3:+11370138 | MS.gene069085:CDS |
| CCCATGGTAGAGGTCACAAA+TGG | 0.556010 | 5.3:+11370283 | MS.gene069085:CDS |
| ATCTGGTGTGACGAGACATA+GGG | 0.559207 | 5.3:-11367086 | None:intergenic |
| AGAAGACCCATTCGAGCCCA+CGG | 0.559374 | 5.3:+11367156 | MS.gene069085:CDS |
| TGCAAGTGTCGAATATTTGG+AGG | 0.560033 | 5.3:-11370409 | None:intergenic |
| ACCATTTGTGACCTCTACCA+TGG | 0.561783 | 5.3:-11370284 | None:intergenic |
| GTAGAGGTCACAAATGGTGC+TGG | 0.562911 | 5.3:+11370289 | MS.gene069085:CDS |
| ACAGAGCTTGAACTTGAAGC+AGG | 0.565561 | 5.3:-11370352 | None:intergenic |
| GGGAAGATTGAAGGTAAAGC+GGG | 0.566199 | 5.3:-11367219 | None:intergenic |
| CCCCAGCTGTTCCTCCGGAG+CGG | 0.571837 | 5.3:+11369975 | MS.gene069085:CDS |
| ATATTTGGAGGAGCAGATGA+AGG | 0.572074 | 5.3:-11370397 | None:intergenic |
| AGATTTATTGAGCTGAAGAA+GGG | 0.572226 | 5.3:-11369298 | None:intergenic |
| CAGGAACTGGCTACTCACAT+AGG | 0.573292 | 5.3:+11369746 | MS.gene069085:intron |
| AGGAGGACTGTAAAGTTGGT+TGG | 0.579622 | 5.3:-11370332 | None:intergenic |
| ACAACCTGAACCCATGGTAG+AGG | 0.579624 | 5.3:+11370273 | MS.gene069085:CDS |
| GGGAAATACATCAAGATACT+GGG | 0.584566 | 5.3:+11369207 | MS.gene069085:CDS |
| CGTTGCACAACAACAACCAC+CGG | 0.589945 | 5.3:+11366968 | MS.gene069085:CDS |
| CCACCAACAACCTGAACCCA+TGG | 0.593498 | 5.3:+11370267 | MS.gene069085:CDS |
| CCATTTGTGACCTCTACCAT+GGG | 0.594086 | 5.3:-11370283 | None:intergenic |
| GGGCGCGCAGGTGGAAGATG+TGG | 0.601302 | 5.3:-11367054 | None:intergenic |
| GAAGACCCATTCGAGCCCAC+GGG | 0.610171 | 5.3:+11367157 | MS.gene069085:CDS |
| ACAGCTGGGGTGTAATTAGA+GGG | 0.610212 | 5.3:-11369962 | None:intergenic |
| CAAGGTATCCCGAAAAGGAG+AGG | 0.615007 | 5.3:-11367240 | None:intergenic |
| AAGGTATCCCGAAAAGGAGA+GGG | 0.619065 | 5.3:-11367239 | None:intergenic |
| ATCACAGAATGCACATCATG+CGG | 0.620104 | 5.3:+11366998 | MS.gene069085:CDS |
| AGGTTAGAATATAACCTGAA+GGG | 0.624033 | 5.3:-11367512 | None:intergenic |
| AGAAGACAAACGCAAAACCC+AGG | 0.626006 | 5.3:+11369853 | MS.gene069085:CDS |
| TAAGGACCATGTTGAGAAAG+CGG | 0.635021 | 5.3:-11367188 | None:intergenic |
| AGGGAAGATTGAAGGTAAAG+CGG | 0.636882 | 5.3:-11367220 | None:intergenic |
| GAGCTTGAACTTGAAGCAGG+AGG | 0.641001 | 5.3:-11370349 | None:intergenic |
| CGCAGGTGGAAGATGTGGTG+AGG | 0.641116 | 5.3:-11367049 | None:intergenic |
| AATTTCAATTGCCGCCAATG+TGG | 0.648364 | 5.3:+11369170 | MS.gene069085:CDS |
| TTTGGAGGAGCAGATGAAGG+AGG | 0.658376 | 5.3:-11370394 | None:intergenic |
| CCGCTCCGGAGGAACAGCTG+GGG | 0.661546 | 5.3:-11369975 | None:intergenic |
| AAAGCGGTTATGAAGCCCGT+GGG | 0.662090 | 5.3:-11367172 | None:intergenic |
| AACAAACCTAATGAGGCCGA+AGG | 0.665876 | 5.3:+11370106 | MS.gene069085:CDS |
| GAGTACGTTCAAGTTCCGCA+AGG | 0.674170 | 5.3:-11367258 | None:intergenic |
| TCTGGTGTGACGAGACATAG+GGG | 0.679597 | 5.3:-11367085 | None:intergenic |
| GAAAGCGGTTATGAAGCCCG+TGG | 0.684756 | 5.3:-11367173 | None:intergenic |
| GAAGTGCCCATACTGTTCAG+CGG | 0.702862 | 5.3:+11366937 | MS.gene069085:CDS |
| TTGGCAAGCCAAATATATGG+CGG | 0.712362 | 5.3:-11369828 | None:intergenic |
| ATTGTCTTTCTTCTACGACG+CGG | 0.797371 | 5.3:-11367021 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTGTATTTGTAATATAA+AGG | - | chr5.3:11369699-11369718 | None:intergenic | 15.0% |
| !!! | TTAATTTTTTTTTGACAAAG+AGG | + | chr5.3:11368012-11368031 | MS.gene069085:intron | 15.0% |
| !! | ATAAATAATAGAGGAAATGA+AGG | - | chr5.3:11368891-11368910 | None:intergenic | 20.0% |
| !! | ATCTATTACTAATTGTATCA+TGG | - | chr5.3:11369441-11369460 | None:intergenic | 20.0% |
| !! | ATGCTGAATATAAATAATAG+AGG | - | chr5.3:11368900-11368919 | None:intergenic | 20.0% |
| !! | GTAATTCTTTATACACTTTA+CGG | - | chr5.3:11369919-11369938 | None:intergenic | 20.0% |
| !! | TAAAGTGTATAAAGAATTAC+TGG | + | chr5.3:11369919-11369938 | MS.gene069085:CDS | 20.0% |
| !! | TAATAGTCTAATATTGCAAA+TGG | + | chr5.3:11368224-11368243 | MS.gene069085:intron | 20.0% |
| !!! | AAAATAAGCTTTTTAGTAAC+TGG | - | chr5.3:11368448-11368467 | None:intergenic | 20.0% |
| !!! | AAATAAGCTTTTTAGTAACT+GGG | - | chr5.3:11368447-11368466 | None:intergenic | 20.0% |
| !!! | ATTTGCTATTGATAATACTT+TGG | + | chr5.3:11369034-11369053 | MS.gene069085:intron | 20.0% |
| !!! | CTTATTTTTGTCTATGAAAA+TGG | + | chr5.3:11368460-11368479 | MS.gene069085:intron | 20.0% |
| !!! | GTTAATATTGGACAATTTTT+CGG | + | chr5.3:11368372-11368391 | MS.gene069085:intron | 20.0% |
| !!! | TATTTCATATAGCAGATTTT+TGG | + | chr5.3:11368992-11369011 | MS.gene069085:intron | 20.0% |
| !!! | TTCTCTATGATTTTTCTATT+GGG | + | chr5.3:11369474-11369493 | MS.gene069085:intron | 20.0% |
| !!! | TTTTTTGTTAAAAGCTGAAT+TGG | + | chr5.3:11367928-11367947 | MS.gene069085:intron | 20.0% |
| ! | AAAATACCATTACCATATCA+TGG | + | chr5.3:11368193-11368212 | MS.gene069085:intron | 25.0% |
| ! | AATTGAAAGGAGGAAAAAAA+AGG | - | chr5.3:11367535-11367554 | None:intergenic | 25.0% |
| ! | ACTGAAATTCAAAATCCTTA+AGG | - | chr5.3:11368759-11368778 | None:intergenic | 25.0% |
| ! | ATAAAGAATTACTGGAGAAT+TGG | + | chr5.3:11369927-11369946 | MS.gene069085:CDS | 25.0% |
| ! | ATTTGATATGATGTAAGCAT+TGG | + | chr5.3:11368040-11368059 | MS.gene069085:intron | 25.0% |
| ! | CAATCACATTTATCATCTTT+AGG | - | chr5.3:11367740-11367759 | None:intergenic | 25.0% |
| ! | CGATAAATAGGTAAATAGAA+AGG | - | chr5.3:11368662-11368681 | None:intergenic | 25.0% |
| ! | GATACCTATAATAAGTATCA+GGG | + | chr5.3:11367950-11367969 | MS.gene069085:intron | 25.0% |
| ! | GCATAGGTTATATAAATCAT+TGG | - | chr5.3:11368864-11368883 | None:intergenic | 25.0% |
| ! | GTATTATCAATAGCAAATTG+TGG | - | chr5.3:11369032-11369051 | None:intergenic | 25.0% |
| ! | GTTTAAAGATAAGTTCAATG+TGG | - | chr5.3:11367890-11367909 | None:intergenic | 25.0% |
| ! | TAAAGAATTACTGGAGAATT+GGG | + | chr5.3:11369928-11369947 | MS.gene069085:CDS | 25.0% |
| ! | TAGATTCAATGGATATTGAT+GGG | + | chr5.3:11370233-11370252 | MS.gene069085:CDS | 25.0% |
| ! | TGAACTTATCTTTAAACATC+AGG | + | chr5.3:11367893-11367912 | MS.gene069085:intron | 25.0% |
| ! | TTAGATTCAATGGATATTGA+TGG | + | chr5.3:11370232-11370251 | MS.gene069085:CDS | 25.0% |
| ! | TTCGTTTGAAAATCTTGAAA+CGG | + | chr5.3:11369372-11369391 | MS.gene069085:intron | 25.0% |
| ! | TTGAATGAATGCTCATAATT+CGG | - | chr5.3:11368495-11368514 | None:intergenic | 25.0% |
| ! | TTTCACAAGAGTTACAAATA+CGG | - | chr5.3:11369142-11369161 | None:intergenic | 25.0% |
| !! | CAAGATTTTCAAACGAAATA+AGG | - | chr5.3:11369369-11369388 | None:intergenic | 25.0% |
| !! | CCCTAAAATAACTTTTCTTA+GGG | + | chr5.3:11369654-11369673 | MS.gene069085:intron | 25.0% |
| !! | CTTCTCTATGATTTTTCTAT+TGG | + | chr5.3:11369473-11369492 | MS.gene069085:intron | 25.0% |
| !! | GATATAGAATTGCTGTTAAT+AGG | - | chr5.3:11369255-11369274 | None:intergenic | 25.0% |
| !! | TCAATATCGAGATTTTACTT+GGG | - | chr5.3:11369116-11369135 | None:intergenic | 25.0% |
| !! | TCCATTGAATCTAAAACATT+CGG | - | chr5.3:11370226-11370245 | None:intergenic | 25.0% |
| !! | TCCCTAAAATAACTTTTCTT+AGG | + | chr5.3:11369653-11369672 | MS.gene069085:intron | 25.0% |
| !! | TCTCTATGATTTTTCTATTG+GGG | + | chr5.3:11369475-11369494 | MS.gene069085:intron | 25.0% |
| !!! | ACCCTAAGAAAAGTTATTTT+AGG | - | chr5.3:11369658-11369677 | None:intergenic | 25.0% |
| !!! | ATTCGGATTTTGATGATTTT+GGG | - | chr5.3:11370209-11370228 | None:intergenic | 25.0% |
| !!! | CAGATTCTGTTTTTACTTTA+TGG | - | chr5.3:11369409-11369428 | None:intergenic | 25.0% |
| !!! | CCCTAAGAAAAGTTATTTTA+GGG | - | chr5.3:11369657-11369676 | None:intergenic | 25.0% |
| !!! | TGTTGTTGTTGATAATCTTA+GGG | + | chr5.3:11367312-11367331 | MS.gene069085:CDS | 25.0% |
| !!! | TTCTTTTTTATGCACATGTA+TGG | + | chr5.3:11368814-11368833 | MS.gene069085:intron | 25.0% |
| !!! | TTTTTTTTCCTCCTTTCAAT+TGG | + | chr5.3:11367534-11367553 | MS.gene069085:intron | 25.0% |
| AAAACTAAGCAGCGATAAAT+AGG | - | chr5.3:11368674-11368693 | None:intergenic | 30.0% | |
| AAGGTTAGAATATAACCTGA+AGG | - | chr5.3:11367516-11367535 | None:intergenic | 30.0% | |
| AAGTTTAACCAATTGAAAGG+AGG | - | chr5.3:11367545-11367564 | None:intergenic | 30.0% | |
| AGATTTATTGAGCTGAAGAA+GGG | - | chr5.3:11369301-11369320 | None:intergenic | 30.0% | |
| AGGTTAGAATATAACCTGAA+GGG | - | chr5.3:11367515-11367534 | None:intergenic | 30.0% | |
| ATTAGAAACGATCCATGATA+TGG | - | chr5.3:11368208-11368227 | None:intergenic | 30.0% | |
| CAAATACAAAAGTCTGAGAA+TGG | + | chr5.3:11369707-11369726 | MS.gene069085:intron | 30.0% | |
| CACATACTAGCTAATATGTT+CGG | - | chr5.3:11367664-11367683 | None:intergenic | 30.0% | |
| CCTAAGTTTAACCAATTGAA+AGG | - | chr5.3:11367548-11367567 | None:intergenic | 30.0% | |
| CCTTTCAATTGGTTAAACTT+AGG | + | chr5.3:11367545-11367564 | MS.gene069085:intron | 30.0% | |
| CTATATGAAATAGCAGATAG+TGG | - | chr5.3:11368984-11369003 | None:intergenic | 30.0% | |
| GGATACCTATAATAAGTATC+AGG | + | chr5.3:11367949-11367968 | MS.gene069085:intron | 30.0% | |
| TAAACCAAACAAACCTAATG+AGG | + | chr5.3:11370099-11370118 | MS.gene069085:CDS | 30.0% | |
| TATAGAGGTTACTTCTTCTT+TGG | + | chr5.3:11370054-11370073 | MS.gene069085:CDS | 30.0% | |
| TATCTTTAAACATCAGGACT+GGG | + | chr5.3:11367899-11367918 | MS.gene069085:intron | 30.0% | |
| TGGATCTTACAATTCATGTT+AGG | + | chr5.3:11369054-11369073 | MS.gene069085:intron | 30.0% | |
| TTATCTTTAAACATCAGGAC+TGG | + | chr5.3:11367898-11367917 | MS.gene069085:intron | 30.0% | |
| TTTGGATTCAGAAAATTTGC+CGG | + | chr5.3:11370072-11370091 | MS.gene069085:CDS | 30.0% | |
| ! | ACCAGTTACTTTGCAAATTT+CGG | - | chr5.3:11369879-11369898 | None:intergenic | 30.0% |
| ! | AGTCTTGTAAGTGATTTAGT+TGG | + | chr5.3:11368325-11368344 | MS.gene069085:intron | 30.0% |
| ! | ATCATGCTTTTCAGTTGTTT+AGG | + | chr5.3:11367392-11367411 | MS.gene069085:CDS | 30.0% |
| ! | ATTTTACTTGGGATCACAAA+GGG | - | chr5.3:11369105-11369124 | None:intergenic | 30.0% |
| ! | GAGAAAAGCCTGTAAATTTT+GGG | - | chr5.3:11369082-11369101 | None:intergenic | 30.0% |
| ! | GGTTTGTTTGGTTTAAATTC+CGG | - | chr5.3:11370094-11370113 | None:intergenic | 30.0% |
| ! | GTCAATATCGAGATTTTACT+TGG | - | chr5.3:11369117-11369136 | None:intergenic | 30.0% |
| ! | TCATGCTTTTCAGTTGTTTA+GGG | + | chr5.3:11367393-11367412 | MS.gene069085:CDS | 30.0% |
| ! | TTGTTCTTTTCTCAACCAAA+GGG | + | chr5.3:11369550-11369569 | MS.gene069085:intron | 30.0% |
| ! | TTTGTTCTTTTCTCAACCAA+AGG | + | chr5.3:11369549-11369568 | MS.gene069085:intron | 30.0% |
| !! | CATTCGGATTTTGATGATTT+TGG | - | chr5.3:11370210-11370229 | None:intergenic | 30.0% |
| !! | GTCTTATTTCAATTGCTATG+CGG | + | chr5.3:11368939-11368958 | MS.gene069085:intron | 30.0% |
| !! | GTGTTGTTGTTGATAATCTT+AGG | + | chr5.3:11367311-11367330 | MS.gene069085:CDS | 30.0% |
| !! | TAACTCTAGAAGTCACATTT+TGG | - | chr5.3:11369345-11369364 | None:intergenic | 30.0% |
| !! | TCCGAATGTTTTAGATTCAA+TGG | + | chr5.3:11370222-11370241 | MS.gene069085:CDS | 30.0% |
| AACGATCCATGATATGGTAA+TGG | - | chr5.3:11368202-11368221 | None:intergenic | 35.0% | |
| AATATAACCTGAAGGGTTCT+AGG | - | chr5.3:11367508-11367527 | None:intergenic | 35.0% | |
| AATGTGAACTCATTCTTCTG+TGG | + | chr5.3:11368077-11368096 | MS.gene069085:intron | 35.0% | |
| AATGTGGCACAAAAGGAAAT+CGG | + | chr5.3:11369186-11369205 | MS.gene069085:CDS | 35.0% | |
| ACACTACTCTTTGAATCCTT+TGG | - | chr5.3:11367849-11367868 | None:intergenic | 35.0% | |
| ACAGCAAGGAGAAATATGTT+TGG | - | chr5.3:11368518-11368537 | None:intergenic | 35.0% | |
| ACTTCATAAATCCCTAGAAG+TGG | - | chr5.3:11368104-11368123 | None:intergenic | 35.0% | |
| ATAATAGAGGAAATGAAGGC+AGG | - | chr5.3:11368887-11368906 | None:intergenic | 35.0% | |
| ATAGATGTTTCGTCGATACT+TGG | + | chr5.3:11367349-11367368 | MS.gene069085:CDS | 35.0% | |
| ATGAGTTGTGTATGACCTTA+AGG | + | chr5.3:11368741-11368760 | MS.gene069085:intron | 35.0% | |
| CAGATTTATTGAGCTGAAGA+AGG | - | chr5.3:11369302-11369321 | None:intergenic | 35.0% | |
| CTTAATTCTACAAGCTAGAC+AGG | - | chr5.3:11367641-11367660 | None:intergenic | 35.0% | |
| GAGTAGTGTGTTTAGATCTT+AGG | + | chr5.3:11367860-11367879 | MS.gene069085:intron | 35.0% | |
| GCACGTAGAATCGTTAATAT+TGG | + | chr5.3:11368360-11368379 | MS.gene069085:intron | 35.0% | |
| GCTTCCCTGATACTTATTAT+AGG | - | chr5.3:11367957-11367976 | None:intergenic | 35.0% | |
| GGGAAATACATCAAGATACT+GGG | + | chr5.3:11369207-11369226 | MS.gene069085:CDS | 35.0% | |
| GTTAGGATCCCAAAATTTAC+AGG | + | chr5.3:11369071-11369090 | MS.gene069085:intron | 35.0% | |
| TAATAGAGGAAATGAAGGCA+GGG | - | chr5.3:11368886-11368905 | None:intergenic | 35.0% | |
| TAGTTGGCAAGCCAAATATA+TGG | - | chr5.3:11369834-11369853 | None:intergenic | 35.0% | |
| TCACTTACAAGACTGAGATA+TGG | - | chr5.3:11368319-11368338 | None:intergenic | 35.0% | |
| TGTAACTCTTGTGAAATGAC+AGG | + | chr5.3:11369146-11369165 | MS.gene069085:intron | 35.0% | |
| ! | CTGCTACTTGTTTGAGAAAT+CGG | + | chr5.3:11367425-11367444 | MS.gene069085:CDS | 35.0% |
| ! | GATTTTACTTGGGATCACAA+AGG | - | chr5.3:11369106-11369125 | None:intergenic | 35.0% |
| ! | GCTAGTATGTGATTTTCGTT+AGG | + | chr5.3:11367673-11367692 | MS.gene069085:intron | 35.0% |
| ! | GGAGAAAAGCCTGTAAATTT+TGG | - | chr5.3:11369083-11369102 | None:intergenic | 35.0% |
| ! | TTTTACTTGGGATCACAAAG+GGG | - | chr5.3:11369104-11369123 | None:intergenic | 35.0% |
| ! | TTTTGCGTTTGTCTTCTAGT+TGG | - | chr5.3:11369850-11369869 | None:intergenic | 35.0% |
| !! | AACTAAGGTTGATGCTATAG+AGG | + | chr5.3:11370039-11370058 | MS.gene069085:CDS | 35.0% |
| !! | ACAATTTTTCGGCAATCCTA+GGG | + | chr5.3:11368383-11368402 | MS.gene069085:intron | 35.0% |
| !! | ACGAGCATTACTTTTACCTT+CGG | - | chr5.3:11370125-11370144 | None:intergenic | 35.0% |
| !! | ATATCTGCTCTGCTTTTACA+AGG | + | chr5.3:11369504-11369523 | MS.gene069085:intron | 35.0% |
| !! | GATTGCAAGTGTCGAATATT+TGG | - | chr5.3:11370415-11370434 | None:intergenic | 35.0% |
| !! | GCATTCTGTGATTGATTTTC+CGG | - | chr5.3:11366990-11367009 | None:intergenic | 35.0% |
| !!! | TGCTGAAGTGTTTTTTGTGA+TGG | + | chr5.3:11368780-11368799 | MS.gene069085:intron | 35.0% |
| AAAAGGAGAGGGAAGATTGA+AGG | - | chr5.3:11367231-11367250 | None:intergenic | 40.0% | |
| AAGAGAGAGATGCATGAGAA+GGG | - | chr5.3:11368543-11368562 | None:intergenic | 40.0% | |
| AATAAATCTGCTCAGGTACC+TGG | + | chr5.3:11369312-11369331 | MS.gene069085:intron | 40.0% | |
| AATGGACAATCAGTTAGACC+TGG | + | chr5.3:11369579-11369598 | MS.gene069085:intron | 40.0% | |
| AATTTCAATTGCCGCCAATG+TGG | + | chr5.3:11369170-11369189 | MS.gene069085:CDS | 40.0% | |
| ACCAAGTAGGAGAAGAGAAA+AGG | - | chr5.3:11368616-11368635 | None:intergenic | 40.0% | |
| ACTTGTAACTCTCAAGCCAA+AGG | + | chr5.3:11367830-11367849 | MS.gene069085:intron | 40.0% | |
| AGAACGTCCAGAAGCAATTA+AGG | - | chr5.3:11370014-11370033 | None:intergenic | 40.0% | |
| AGGGAAGATTGAAGGTAAAG+CGG | - | chr5.3:11367223-11367242 | None:intergenic | 40.0% | |
| ATATTTGGAGGAGCAGATGA+AGG | - | chr5.3:11370400-11370419 | None:intergenic | 40.0% | |
| ATCACAGAATGCACATCATG+CGG | + | chr5.3:11366998-11367017 | MS.gene069085:CDS | 40.0% | |
| ATGTGGCACAAAAGGAAATC+GGG | + | chr5.3:11369187-11369206 | MS.gene069085:CDS | 40.0% | |
| ATTGTCTTTCTTCTACGACG+CGG | - | chr5.3:11367024-11367043 | None:intergenic | 40.0% | |
| CAAGTTCAAGCTCTGTTATG+AGG | + | chr5.3:11370359-11370378 | MS.gene069085:CDS | 40.0% | |
| CACTACCACAAAGTGATCAT+TGG | - | chr5.3:11369617-11369636 | None:intergenic | 40.0% | |
| CAGTTCCTGAAATGCAATGT+AGG | - | chr5.3:11369735-11369754 | None:intergenic | 40.0% | |
| CCAAGTAGGAGAAGAGAAAA+GGG | - | chr5.3:11368615-11368634 | None:intergenic | 40.0% | |
| CCAGAAGCAATTAAGGTTGT+GGG | - | chr5.3:11370007-11370026 | None:intergenic | 40.0% | |
| CGGGAAATACATCAAGATAC+TGG | + | chr5.3:11369206-11369225 | MS.gene069085:CDS | 40.0% | |
| CGTATCTAATGCCGATACTT+TGG | - | chr5.3:11367982-11368001 | None:intergenic | 40.0% | |
| CTACATTGCATTTCAGGAAC+TGG | + | chr5.3:11369733-11369752 | MS.gene069085:intron | 40.0% | |
| GAATGCTCATAATTCGGCAA+GGG | - | chr5.3:11368489-11368508 | None:intergenic | 40.0% | |
| GAGACATAGGGGATTATCTT+GGG | - | chr5.3:11367077-11367096 | None:intergenic | 40.0% | |
| GATGTCCAATGATCACTTTG+TGG | + | chr5.3:11369609-11369628 | MS.gene069085:intron | 40.0% | |
| GCCGAAATTTGCAAAGTAAC+TGG | + | chr5.3:11369875-11369894 | MS.gene069085:CDS | 40.0% | |
| GTAAAAGCAGAGCAGATATG+CGG | - | chr5.3:11369503-11369522 | None:intergenic | 40.0% | |
| TAAGGACCATGTTGAGAAAG+CGG | - | chr5.3:11367191-11367210 | None:intergenic | 40.0% | |
| TACTTTGCAAATTTCGGCCT+GGG | - | chr5.3:11369873-11369892 | None:intergenic | 40.0% | |
| TCAACCAAAGGGTTGTGTAA+TGG | + | chr5.3:11369561-11369580 | MS.gene069085:intron | 40.0% | |
| TCAGCTCAATAAATCTGCTC+AGG | + | chr5.3:11369305-11369324 | MS.gene069085:CDS | 40.0% | |
| TCATAACCGCTTTCTCAACA+TGG | + | chr5.3:11367182-11367201 | MS.gene069085:CDS | 40.0% | |
| TCCAGAAGCAATTAAGGTTG+TGG | - | chr5.3:11370008-11370027 | None:intergenic | 40.0% | |
| TGAATGCTCATAATTCGGCA+AGG | - | chr5.3:11368490-11368509 | None:intergenic | 40.0% | |
| TGGACGTTCTTCAACAACTA+AGG | + | chr5.3:11370024-11370043 | MS.gene069085:CDS | 40.0% | |
| TGTTTCGTCGATACTTGGAT+TGG | + | chr5.3:11367354-11367373 | MS.gene069085:CDS | 40.0% | |
| TTACTTTGCAAATTTCGGCC+TGG | - | chr5.3:11369874-11369893 | None:intergenic | 40.0% | |
| TTGGCAAGCCAAATATATGG+CGG | - | chr5.3:11369831-11369850 | None:intergenic | 40.0% | |
| TTGTCCATTACACAACCCTT+TGG | - | chr5.3:11369568-11369587 | None:intergenic | 40.0% | |
| ! | ACTGAGATATGGATTGCAAG+GGG | - | chr5.3:11368308-11368327 | None:intergenic | 40.0% |
| ! | AGACTGAGATATGGATTGCA+AGG | - | chr5.3:11368310-11368329 | None:intergenic | 40.0% |
| ! | CTATTCAGCAGTCAACGTTT+TGG | + | chr5.3:11370161-11370180 | MS.gene069085:CDS | 40.0% |
| ! | GACTGAGATATGGATTGCAA+GGG | - | chr5.3:11368309-11368328 | None:intergenic | 40.0% |
| ! | GATTTCCTTTTGTGCCACAT+TGG | - | chr5.3:11369187-11369206 | None:intergenic | 40.0% |
| ! | TCAATCTTCCCTCTCCTTTT+CGG | + | chr5.3:11367231-11367250 | MS.gene069085:CDS | 40.0% |
| ! | TGAAATAGCAGATAGTGGTG+CGG | - | chr5.3:11368979-11368998 | None:intergenic | 40.0% |
| ! | TGAAGAAGGGTGCAAAATCT+TGG | - | chr5.3:11369288-11369307 | None:intergenic | 40.0% |
| !! | AAGTATCGGCATTAGATACG+AGG | + | chr5.3:11367982-11368001 | MS.gene069085:intron | 40.0% |
| !! | GACAATTTTTCGGCAATCCT+AGG | + | chr5.3:11368382-11368401 | MS.gene069085:intron | 40.0% |
| !! | GTCTTCTTCTTCGTTGGTTT+CGG | - | chr5.3:11367143-11367162 | None:intergenic | 40.0% |
| !! | TCACATTTTGGTGCAATTCC+AGG | - | chr5.3:11369333-11369352 | None:intergenic | 40.0% |
| !! | TGCAAGTGTCGAATATTTGG+AGG | - | chr5.3:11370412-11370431 | None:intergenic | 40.0% |
| !! | TTCTGTGATTGATTTTCCGG+TGG | - | chr5.3:11366987-11367006 | None:intergenic | 40.0% |
| AAAGGAAATGCGTGCAACAG+AGG | - | chr5.3:11368578-11368597 | None:intergenic | 45.0% | |
| AACAAACCTAATGAGGCCGA+AGG | + | chr5.3:11370106-11370125 | MS.gene069085:CDS | 45.0% | |
| AACAGCTGGGGTGTAATTAG+AGG | - | chr5.3:11369966-11369985 | None:intergenic | 45.0% | |
| AAGCAGGAGGACTGTAAAGT+TGG | - | chr5.3:11370339-11370358 | None:intergenic | 45.0% | |
| ACAGAGCTTGAACTTGAAGC+AGG | - | chr5.3:11370355-11370374 | None:intergenic | 45.0% | |
| ACAGCTGGGGTGTAATTAGA+GGG | - | chr5.3:11369965-11369984 | None:intergenic | 45.0% | |
| ACCACTCGGTTTCTTGGATT+AGG | + | chr5.3:11368413-11368432 | MS.gene069085:intron | 45.0% | |
| ACCATTTGTGACCTCTACCA+TGG | - | chr5.3:11370287-11370306 | None:intergenic | 45.0% | |
| ACCTAATCCAAGAAACCGAG+TGG | - | chr5.3:11368417-11368436 | None:intergenic | 45.0% | |
| ACTGCTGAATAGCCGATGAT+TGG | - | chr5.3:11370153-11370172 | None:intergenic | 45.0% | |
| AGAAGACAAACGCAAAACCC+AGG | + | chr5.3:11369853-11369872 | MS.gene069085:CDS | 45.0% | |
| ATCTGGTGTGACGAGACATA+GGG | - | chr5.3:11367089-11367108 | None:intergenic | 45.0% | |
| ATGCTGCTCGTCTACATAGT+TGG | - | chr5.3:11368137-11368156 | None:intergenic | 45.0% | |
| CAAGAGAGAGATGCATGAGA+AGG | - | chr5.3:11368544-11368563 | None:intergenic | 45.0% | |
| CCATTTGTGACCTCTACCAT+GGG | - | chr5.3:11370286-11370305 | None:intergenic | 45.0% | |
| CCCACAACCTTAATTGCTTC+TGG | + | chr5.3:11370004-11370023 | MS.gene069085:CDS | 45.0% | |
| CGAGACATAGGGGATTATCT+TGG | - | chr5.3:11367078-11367097 | None:intergenic | 45.0% | |
| GAATGGGTCTTCTTCTTCGT+TGG | - | chr5.3:11367149-11367168 | None:intergenic | 45.0% | |
| GGGAAGATTGAAGGTAAAGC+GGG | - | chr5.3:11367222-11367241 | None:intergenic | 45.0% | |
| TCAAGAACCTAGAACCCTTC+AGG | + | chr5.3:11367498-11367517 | MS.gene069085:CDS | 45.0% | |
| TCTTCTGTGGTCCACTTCTA+GGG | + | chr5.3:11368090-11368109 | MS.gene069085:intron | 45.0% | |
| TGCTGCTCGTCTACATAGTT+GGG | - | chr5.3:11368136-11368155 | None:intergenic | 45.0% | |
| TGGCTCCTACATTGCATTTC+AGG | + | chr5.3:11369727-11369746 | MS.gene069085:intron | 45.0% | |
| TGTCAGAGAGAACACCAAGT+AGG | - | chr5.3:11368629-11368648 | None:intergenic | 45.0% | |
| TTCTTCTGTGGTCCACTTCT+AGG | + | chr5.3:11368089-11368108 | MS.gene069085:intron | 45.0% | |
| ! | AAGGTATCCCGAAAAGGAGA+GGG | - | chr5.3:11367242-11367261 | None:intergenic | 45.0% |
| ! | AGGAGGACTGTAAAGTTGGT+TGG | - | chr5.3:11370335-11370354 | None:intergenic | 45.0% |
| ! | AGGGAGAGTGTGTCAGATAA+AGG | - | chr5.3:11368596-11368615 | None:intergenic | 45.0% |
| ! | CAATCGTCTAAGACAATGCC+TGG | + | chr5.3:11370430-11370449 | MS.gene069085:CDS | 45.0% |
| ! | CAATCTTCCCTCTCCTTTTC+GGG | + | chr5.3:11367232-11367251 | MS.gene069085:CDS | 45.0% |
| ! | CCCTTTTCTCTTCTCCTACT+TGG | + | chr5.3:11368612-11368631 | MS.gene069085:intron | 45.0% |
| ! | CTCTGTTATGAGGTCGCTTT+CGG | + | chr5.3:11370369-11370388 | MS.gene069085:CDS | 45.0% |
| ! | CTTTTACCTTCGGCCTCATT+AGG | - | chr5.3:11370115-11370134 | None:intergenic | 45.0% |
| ! | GAAATAGCAGATAGTGGTGC+GGG | - | chr5.3:11368978-11368997 | None:intergenic | 45.0% |
| ! | TCGGCCTCATTAGGTTTGTT+TGG | - | chr5.3:11370106-11370125 | None:intergenic | 45.0% |
| ! | TTCCTTTTGTGCCACATTGG+CGG | - | chr5.3:11369184-11369203 | None:intergenic | 45.0% |
| !! | CAGGGAAGCATCCAAAGTAT+CGG | + | chr5.3:11367968-11367987 | MS.gene069085:intron | 45.0% |
| !! | GTCACAAATGGTGCTGGTAT+CGG | + | chr5.3:11370295-11370314 | MS.gene069085:CDS | 45.0% |
| !! | GTGTTGGTTTGGTTGAGAGT+GGG | - | chr5.3:11367121-11367140 | None:intergenic | 45.0% |
| !! | TGATGATTTTGGGTCGCACT+GGG | - | chr5.3:11370199-11370218 | None:intergenic | 45.0% |
| !! | TGTTGGTTTGGTTGAGAGTG+GGG | - | chr5.3:11367120-11367139 | None:intergenic | 45.0% |
| !! | TTCTTCGTTGGTTTCGGTGT+TGG | - | chr5.3:11367137-11367156 | None:intergenic | 45.0% |
| !! | TTGATGATTTTGGGTCGCAC+TGG | - | chr5.3:11370200-11370219 | None:intergenic | 45.0% |
| AAAGCGGTTATGAAGCCCGT+GGG | - | chr5.3:11367175-11367194 | None:intergenic | 50.0% | |
| ACAAATGCTTCTGCACTCGC+AGG | + | chr5.3:11369783-11369802 | MS.gene069085:CDS | 50.0% | |
| ACAACCTGAACCCATGGTAG+AGG | + | chr5.3:11370273-11370292 | MS.gene069085:CDS | 50.0% | |
| AGATTGAAGGTAAAGCGGGC+TGG | - | chr5.3:11367218-11367237 | None:intergenic | 50.0% | |
| AGGAAATGAAGGCAGGGCAT+AGG | - | chr5.3:11368880-11368899 | None:intergenic | 50.0% | |
| CAGGAACTGGCTACTCACAT+AGG | + | chr5.3:11369746-11369765 | MS.gene069085:intron | 50.0% | |
| CCCATGGTAGAGGTCACAAA+TGG | + | chr5.3:11370283-11370302 | MS.gene069085:CDS | 50.0% | |
| CGTTGCACAACAACAACCAC+CGG | + | chr5.3:11366968-11366987 | MS.gene069085:CDS | 50.0% | |
| CTCAGCTGCCGCCATATATT+TGG | + | chr5.3:11369820-11369839 | MS.gene069085:CDS | 50.0% | |
| GACAATCAGTTAGACCTGGC+TGG | + | chr5.3:11369583-11369602 | MS.gene069085:intron | 50.0% | |
| GAGCTTGAACTTGAAGCAGG+AGG | - | chr5.3:11370352-11370371 | None:intergenic | 50.0% | |
| GATCTGGTGTGACGAGACAT+AGG | - | chr5.3:11367090-11367109 | None:intergenic | 50.0% | |
| GCTGCTCGTCTACATAGTTG+GGG | - | chr5.3:11368135-11368154 | None:intergenic | 50.0% | |
| GTAGAGGTCACAAATGGTGC+TGG | + | chr5.3:11370289-11370308 | MS.gene069085:CDS | 50.0% | |
| GTGGAAGATGTGGTGAGGAT+GGG | - | chr5.3:11367047-11367066 | None:intergenic | 50.0% | |
| TCGATCACCACTCGGTTTCT+TGG | + | chr5.3:11368407-11368426 | MS.gene069085:intron | 50.0% | |
| TCTGGTGTGACGAGACATAG+GGG | - | chr5.3:11367088-11367107 | None:intergenic | 50.0% | |
| TGCTACTGCTGCTCTTGTTC+AGG | + | chr5.3:11367462-11367481 | MS.gene069085:CDS | 50.0% | |
| TGCTCGTGCAAGCCAATCAT+CGG | + | chr5.3:11370138-11370157 | MS.gene069085:CDS | 50.0% | |
| TTTGGAGGAGCAGATGAAGG+AGG | - | chr5.3:11370397-11370416 | None:intergenic | 50.0% | |
| ! | CAAGGTATCCCGAAAAGGAG+AGG | - | chr5.3:11367243-11367262 | None:intergenic | 50.0% |
| ! | CGGTGGTTGTTGTTGTGCAA+CGG | - | chr5.3:11366970-11366989 | None:intergenic | 50.0% |
| ! | GAAGTGCCCATACTGTTCAG+CGG | + | chr5.3:11366937-11366956 | MS.gene069085:CDS | 50.0% |
| ! | GAGTACGTTCAAGTTCCGCA+AGG | - | chr5.3:11367261-11367280 | None:intergenic | 50.0% |
| ! | GATTGAAGGTAAAGCGGGCT+GGG | - | chr5.3:11367217-11367236 | None:intergenic | 50.0% |
| ! | TTCCGCAAGGTATCCCGAAA+AGG | - | chr5.3:11367248-11367267 | None:intergenic | 50.0% |
| !! | CGTTGGTTTCGGTGTTGGTT+TGG | - | chr5.3:11367132-11367151 | None:intergenic | 50.0% |
| !! | CTACCATGGGTTCAGGTTGT+TGG | - | chr5.3:11370273-11370292 | None:intergenic | 50.0% |
| !! | CTCCTTTTCGGGATACCTTG+CGG | + | chr5.3:11367243-11367262 | MS.gene069085:CDS | 50.0% |
| !! | GGTGTTGGTTTGGTTGAGAG+TGG | - | chr5.3:11367122-11367141 | None:intergenic | 50.0% |
| !! | GTTGGTTTGGTTGAGAGTGG+GGG | - | chr5.3:11367119-11367138 | None:intergenic | 50.0% |
| !! | TTGGTTTGGTTGAGAGTGGG+GGG | - | chr5.3:11367118-11367137 | None:intergenic | 50.0% |
| AGAAGACCCATTCGAGCCCA+CGG | + | chr5.3:11367156-11367175 | MS.gene069085:CDS | 55.0% | |
| ATCAGTTAGACCTGGCTGGC+TGG | + | chr5.3:11369587-11369606 | MS.gene069085:intron | 55.0% | |
| CCACCAACAACCTGAACCCA+TGG | + | chr5.3:11370267-11370286 | MS.gene069085:CDS | 55.0% | |
| CTTGCGCCGCTGAACAGTAT+GGG | - | chr5.3:11366946-11366965 | None:intergenic | 55.0% | |
| GAAAGCGGTTATGAAGCCCG+TGG | - | chr5.3:11367176-11367195 | None:intergenic | 55.0% | |
| GCATGAGAAGGGAGACAGCA+AGG | - | chr5.3:11368532-11368551 | None:intergenic | 55.0% | |
| GCGGCAGCTGAGATGCTAAT+TGG | - | chr5.3:11369812-11369831 | None:intergenic | 55.0% | |
| GGAAATGCGTGCAACAGAGG+AGG | - | chr5.3:11368575-11368594 | None:intergenic | 55.0% | |
| GGTGGAAGATGTGGTGAGGA+TGG | - | chr5.3:11367048-11367067 | None:intergenic | 55.0% | |
| GTGACCTCTACCATGGGTTC+AGG | - | chr5.3:11370280-11370299 | None:intergenic | 55.0% | |
| TGCCGCCAATGTGGCACAAA+AGG | + | chr5.3:11369179-11369198 | MS.gene069085:CDS | 55.0% | |
| TTACACCCCAGCTGTTCCTC+CGG | + | chr5.3:11369970-11369989 | MS.gene069085:CDS | 55.0% | |
| TTGGGTCGCACTGGGAAGTT+GGG | - | chr5.3:11370191-11370210 | None:intergenic | 55.0% | |
| TTTGGGTCGCACTGGGAAGT+TGG | - | chr5.3:11370192-11370211 | None:intergenic | 55.0% | |
| TTTGGTTGAGAGTGGGGGGA+GGG | - | chr5.3:11367114-11367133 | None:intergenic | 55.0% | |
| !! | CCATGGGTTCAGGTTGTTGG+TGG | - | chr5.3:11370270-11370289 | None:intergenic | 55.0% |
| ATGAAGCCCGTGGGCTCGAA+TGG | - | chr5.3:11367166-11367185 | None:intergenic | 60.0% | |
| CATTGGACATCCAGCCAGCC+AGG | - | chr5.3:11369600-11369619 | None:intergenic | 60.0% | |
| CCATACTGTTCAGCGGCGCA+AGG | + | chr5.3:11366944-11366963 | MS.gene069085:CDS | 60.0% | |
| CCTAGGGCTCGATCACCACT+CGG | + | chr5.3:11368399-11368418 | MS.gene069085:intron | 60.0% | |
| CCTTGCGCCGCTGAACAGTA+TGG | - | chr5.3:11366947-11366966 | None:intergenic | 60.0% | |
| CGCAGGTGGAAGATGTGGTG+AGG | - | chr5.3:11367052-11367071 | None:intergenic | 60.0% | |
| GAAGACCCATTCGAGCCCAC+GGG | + | chr5.3:11367157-11367176 | MS.gene069085:CDS | 60.0% | |
| GATTATCTTGGGCGCGCAGG+TGG | - | chr5.3:11367066-11367085 | None:intergenic | 60.0% | |
| GTTGTGGGAAATGCCCGCTC+CGG | - | chr5.3:11369992-11370011 | None:intergenic | 60.0% | |
| GTTTGGTTGAGAGTGGGGGG+AGG | - | chr5.3:11367115-11367134 | None:intergenic | 60.0% | |
| TGAAGCCCGTGGGCTCGAAT+GGG | - | chr5.3:11367165-11367184 | None:intergenic | 60.0% | |
| !! | GTAAAGCGGGCTGGGCTCTA+AGG | - | chr5.3:11367209-11367228 | None:intergenic | 60.0% |
| AGAGTGGGGGGAGGGAGATC+TGG | - | chr5.3:11367106-11367125 | None:intergenic | 65.0% | |
| CCGAGTGGTGATCGAGCCCT+AGG | - | chr5.3:11368402-11368421 | None:intergenic | 65.0% | |
| GGGGATTATCTTGGGCGCGC+AGG | - | chr5.3:11367069-11367088 | None:intergenic | 65.0% | |
| CCCAGCTGTTCCTCCGGAGC+GGG | + | chr5.3:11369976-11369995 | MS.gene069085:CDS | 70.0% | |
| CCCCAGCTGTTCCTCCGGAG+CGG | + | chr5.3:11369975-11369994 | MS.gene069085:CDS | 70.0% | |
| CCCGCTCCGGAGGAACAGCT+GGG | - | chr5.3:11369979-11369998 | None:intergenic | 70.0% | |
| CCGCTCCGGAGGAACAGCTG+GGG | - | chr5.3:11369978-11369997 | None:intergenic | 70.0% | |
| GGGCGCGCAGGTGGAAGATG+TGG | - | chr5.3:11367057-11367076 | None:intergenic | 70.0% | |
| GTGGGAAATGCCCGCTCCGG+AGG | - | chr5.3:11369989-11370008 | None:intergenic | 70.0% | |
| GCCCGCTCCGGAGGAACAGC+TGG | - | chr5.3:11369980-11369999 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 11366935 | 11370468 | 11366935 | ID=MS.gene069085 |
| chr5.3 | mRNA | 11366935 | 11370468 | 11366935 | ID=MS.gene069085.t1;Parent=MS.gene069085 |
| chr5.3 | exon | 11366935 | 11367519 | 11366935 | ID=MS.gene069085.t1.exon1;Parent=MS.gene069085.t1 |
| chr5.3 | CDS | 11366935 | 11367519 | 11366935 | ID=cds.MS.gene069085.t1;Parent=MS.gene069085.t1 |
| chr5.3 | exon | 11369168 | 11369326 | 11369168 | ID=MS.gene069085.t1.exon2;Parent=MS.gene069085.t1 |
| chr5.3 | CDS | 11369168 | 11369326 | 11369168 | ID=cds.MS.gene069085.t1;Parent=MS.gene069085.t1 |
| chr5.3 | exon | 11369749 | 11370468 | 11369749 | ID=MS.gene069085.t1.exon3;Parent=MS.gene069085.t1 |
| chr5.3 | CDS | 11369749 | 11370468 | 11369749 | ID=cds.MS.gene069085.t1;Parent=MS.gene069085.t1 |
| Gene Sequence |
| Protein sequence |
