Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05904.t1 | XP_003630778.3 | 94.4 | 521 | 29 | 0 | 1 | 521 | 1 | 521 | 2.20E-280 | 974.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05904.t1 | Q9SZD1 | 58.7 | 487 | 159 | 7 | 35 | 505 | 103 | 563 | 1.3e-145 | 518.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05904.t1 | A0A396GR76 | 94.4 | 521 | 29 | 0 | 1 | 521 | 1 | 521 | 1.6e-280 | 974.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene05904.t1 | TF | CPP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05904 | MS.gene069085 | 0.811498 | 6.79E-51 | -1.69E-46 |
| MS.gene05904 | MS.gene069225 | -0.800561 | 1.36E-48 | -1.69E-46 |
| MS.gene05904 | MS.gene29053 | 0.825321 | 5.00E-54 | -1.69E-46 |
| MS.gene05904 | MS.gene59352 | 0.820337 | 7.23E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059637 | MS.gene05904 | PPI |
| MS.gene015761 | MS.gene05904 | PPI |
| MS.gene049110 | MS.gene05904 | PPI |
| MS.gene05904 | MS.gene04747 | PPI |
| MS.gene042998 | MS.gene05904 | PPI |
| MS.gene05904 | MS.gene042998 | PPI |
| MS.gene05904 | MS.gene69135 | PPI |
| MS.gene69136 | MS.gene05904 | PPI |
| MS.gene61350 | MS.gene05904 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05904.t1 | MTR_8g103320 | 97.689 | 476 | 11 | 0 | 1 | 476 | 1 | 476 | 0.0 | 966 |
| MS.gene05904.t1 | MTR_6g087590 | 65.025 | 609 | 150 | 11 | 1 | 560 | 1 | 595 | 0.0 | 734 |
| MS.gene05904.t1 | MTR_3g110122 | 42.387 | 486 | 247 | 13 | 36 | 512 | 101 | 562 | 2.21e-108 | 338 |
| MS.gene05904.t1 | MTR_5g006530 | 41.447 | 152 | 83 | 2 | 61 | 211 | 247 | 393 | 3.25e-29 | 122 |
| MS.gene05904.t1 | MTR_1g012020 | 40.462 | 173 | 95 | 5 | 50 | 218 | 469 | 637 | 3.70e-29 | 123 |
| MS.gene05904.t1 | MTR_5g006530 | 41.447 | 152 | 83 | 2 | 61 | 211 | 471 | 617 | 5.06e-29 | 123 |
| MS.gene05904.t1 | MTR_1g103230 | 33.898 | 118 | 77 | 1 | 95 | 211 | 450 | 567 | 1.92e-14 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05904.t1 | AT4G29000 | 65.207 | 434 | 138 | 7 | 61 | 489 | 109 | 534 | 0.0 | 553 |
| MS.gene05904.t1 | AT2G20110 | 49.913 | 577 | 198 | 16 | 1 | 528 | 1 | 535 | 1.13e-174 | 508 |
| MS.gene05904.t1 | AT2G20110 | 50.714 | 560 | 182 | 15 | 1 | 508 | 1 | 518 | 1.71e-174 | 506 |
| MS.gene05904.t1 | AT2G20110 | 49.315 | 584 | 198 | 17 | 1 | 528 | 1 | 542 | 1.11e-171 | 500 |
| MS.gene05904.t1 | AT5G25790 | 42.534 | 442 | 199 | 11 | 47 | 476 | 50 | 448 | 1.02e-103 | 322 |
| MS.gene05904.t1 | AT5G25790 | 42.534 | 442 | 199 | 11 | 47 | 476 | 50 | 448 | 3.77e-103 | 322 |
| MS.gene05904.t1 | AT5G25790 | 42.152 | 446 | 191 | 13 | 47 | 476 | 50 | 444 | 3.53e-101 | 315 |
| MS.gene05904.t1 | AT3G16160 | 31.291 | 457 | 193 | 14 | 24 | 470 | 17 | 362 | 1.64e-41 | 154 |
| MS.gene05904.t1 | AT3G22760 | 44.172 | 163 | 82 | 5 | 61 | 219 | 184 | 341 | 2.62e-34 | 136 |
| MS.gene05904.t1 | AT3G22760 | 44.172 | 163 | 82 | 5 | 61 | 219 | 307 | 464 | 6.53e-34 | 137 |
| MS.gene05904.t1 | AT4G14770 | 44.776 | 134 | 67 | 3 | 83 | 212 | 375 | 505 | 5.36e-32 | 132 |
| MS.gene05904.t1 | AT4G14770 | 44.776 | 134 | 67 | 3 | 83 | 212 | 355 | 485 | 6.09e-32 | 131 |
| MS.gene05904.t1 | AT4G14770 | 44.776 | 134 | 67 | 3 | 83 | 212 | 356 | 486 | 6.17e-32 | 131 |
| MS.gene05904.t1 | AT3G22780 | 44.030 | 134 | 68 | 3 | 83 | 212 | 401 | 531 | 4.62e-31 | 129 |
| MS.gene05904.t1 | AT3G04850 | 45.736 | 129 | 69 | 1 | 83 | 210 | 453 | 581 | 2.57e-30 | 126 |
Find 152 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGTCTTGTTTCAGAAAA+TGG | 0.136929 | 4.4:-3132020 | MS.gene05904:CDS |
| GACTTTGATTTAGGAGATTC+TGG | 0.202009 | 4.4:+3136809 | None:intergenic |
| TTGGGTCTTGACTTTGATTT+AGG | 0.219084 | 4.4:+3136800 | None:intergenic |
| TCTTAATAGGGTTATCACTA+TGG | 0.229357 | 4.4:-3132882 | MS.gene05904:CDS |
| GGAGACATTGGCCTCCCTTT+TGG | 0.278244 | 4.4:+3133079 | None:intergenic |
| TCTCCCCATCAGCTTCCTTT+TGG | 0.283654 | 4.4:+3133185 | None:intergenic |
| TTGAGTCTCTAACTCACTTC+TGG | 0.285807 | 4.4:+3132340 | None:intergenic |
| GGAAGTGTCGGCGGTGGTTG+TGG | 0.289843 | 4.4:+3137252 | None:intergenic |
| CAGCTCGATTTCAACGCTTT+TGG | 0.295923 | 4.4:-3137309 | MS.gene05904:CDS |
| TGCTTTGCCGACGTTATTAC+AGG | 0.297076 | 4.4:+3132247 | None:intergenic |
| ACATCTTCACAATTGCCTTA+TGG | 0.308433 | 4.4:-3132968 | MS.gene05904:CDS |
| GCAGCCAATGCTGCTATAAC+TGG | 0.312657 | 4.4:-3135508 | MS.gene05904:CDS |
| ATCACTATGGGCGAAATAAA+TGG | 0.314147 | 4.4:-3132869 | MS.gene05904:intron |
| GAAGTGTCGGCGGTGGTTGT+GGG | 0.336832 | 4.4:+3137253 | None:intergenic |
| CGGAACTCTGGCCGTCCATC+AGG | 0.341120 | 4.4:-3135429 | MS.gene05904:CDS |
| TATATCTATTGTTCGACCTT+CGG | 0.358406 | 4.4:+3131987 | None:intergenic |
| GCAGTCTTGTTTCAGAAAAT+GGG | 0.359660 | 4.4:-3132019 | MS.gene05904:CDS |
| GGCGGTGGTTGTGGGTGTTC+CGG | 0.362076 | 4.4:+3137261 | None:intergenic |
| TGCCATCACTTCAACGCCTT+TGG | 0.368657 | 4.4:-3132084 | MS.gene05904:CDS |
| CGTGTTGGACCTTCAACATT+AGG | 0.374824 | 4.4:-3134399 | MS.gene05904:CDS |
| GCTGCTATAACTGGAGCTAT+TGG | 0.378616 | 4.4:-3135499 | MS.gene05904:CDS |
| CACCATCACTTCAACACCTT+TGG | 0.384125 | 4.4:-3132117 | MS.gene05904:CDS |
| CACCATCACTTCAACACCTT+TGG | 0.384125 | 4.4:-3132150 | MS.gene05904:CDS |
| TCCGGCAGAGGTGCAGTTAC+CGG | 0.392618 | 4.4:+3137279 | None:intergenic |
| AAACAGAGCAAAGCTCCTTC+AGG | 0.392877 | 4.4:+3134235 | None:intergenic |
| TCTTTCGTTCCTTGTCCATA+AGG | 0.397871 | 4.4:+3132953 | None:intergenic |
| TTTCAGTGCGATTGATGATT+GGG | 0.398288 | 4.4:+3132312 | None:intergenic |
| TGGAGATCAAAACAACAATA+TGG | 0.398327 | 4.4:-3135545 | MS.gene05904:CDS |
| CACATCAATGCTAAAGTTCC+AGG | 0.399973 | 4.4:+3133058 | None:intergenic |
| CTGCCTAGCAAGCTTCTTAA+CGG | 0.406846 | 4.4:+3137329 | None:intergenic |
| GAAGGTCCAACACGAGGTAC+TGG | 0.411988 | 4.4:+3134408 | None:intergenic |
| AACGCAATCCAAATGCCTTT+AGG | 0.412558 | 4.4:-3136492 | MS.gene05904:CDS |
| ACTGGAGCTATTGGTTCCTC+TGG | 0.415396 | 4.4:-3135490 | MS.gene05904:CDS |
| CACCATCACTTCAGCACCTA+TGG | 0.418273 | 4.4:-3132216 | MS.gene05904:CDS |
| TCCATCAGGGATCCATCGTT+TGG | 0.418364 | 4.4:-3135415 | MS.gene05904:CDS |
| CCTCTTCCTGCACCCAAAGT+GGG | 0.422177 | 4.4:-3137228 | MS.gene05904:CDS |
| AAAGAAAAGGTTCGGAACTC+TGG | 0.425606 | 4.4:-3135441 | MS.gene05904:CDS |
| CGTCACTTCAACAACACCTT+TGG | 0.427483 | 4.4:-3132048 | MS.gene05904:CDS |
| TTTGAAGGGCCTAATGTTGA+AGG | 0.430598 | 4.4:+3134390 | None:intergenic |
| GCCCTTCAAAATTTATGTAC+AGG | 0.435578 | 4.4:-3134377 | MS.gene05904:intron |
| CTTAATAGGGTTATCACTAT+GGG | 0.444084 | 4.4:-3132881 | MS.gene05904:CDS |
| CAGAACAAAGAATGTTGGCT+TGG | 0.445420 | 4.4:+3135632 | None:intergenic |
| CCTAAGACTGACCCCACTTT+GGG | 0.446599 | 4.4:+3137216 | None:intergenic |
| GCCTAAGACTGACCCCACTT+TGG | 0.446742 | 4.4:+3137215 | None:intergenic |
| AACATCAGCACCATCTGAAC+TGG | 0.452271 | 4.4:+3133102 | None:intergenic |
| AAAGGGAGGCCAATGTCTCC+TGG | 0.459213 | 4.4:-3133076 | MS.gene05904:CDS |
| GGCAGCGCAACAGCAAGGAC+TGG | 0.462015 | 4.4:-3132276 | MS.gene05904:CDS |
| GAGCGACAGGCTTTGTTCCA+TGG | 0.463378 | 4.4:-3135565 | MS.gene05904:CDS |
| GCCGGTAACTGCACCTCTGC+CGG | 0.463775 | 4.4:-3137280 | MS.gene05904:CDS |
| CTGTTGCGCTGCCTCAGTAC+TGG | 0.464401 | 4.4:+3132286 | None:intergenic |
| CCCACTTTGGGTGCAGGAAG+AGG | 0.467373 | 4.4:+3137228 | None:intergenic |
| TGGTAATTGCTCTTGATTTG+AGG | 0.468628 | 4.4:+3133210 | None:intergenic |
| TGAGCCATCGACGCAGTTGA+GGG | 0.478336 | 4.4:+3133001 | None:intergenic |
| GCAGCGCAACAGCAAGGACT+GGG | 0.486221 | 4.4:-3132275 | MS.gene05904:CDS |
| AGCTCCAGTTATAGCAGCAT+TGG | 0.488511 | 4.4:+3135504 | None:intergenic |
| GATGGTGCTGATGTTCCAAA+AGG | 0.490293 | 4.4:-3133094 | MS.gene05904:CDS |
| GTTTGGAAAGCTAGGACAAC+AGG | 0.490764 | 4.4:-3135398 | MS.gene05904:intron |
| AAAGATGAAGAGGGTGCTGC+AGG | 0.491726 | 4.4:+3134441 | None:intergenic |
| CACCATCACTTCAACACCTA+TGG | 0.496104 | 4.4:-3132183 | MS.gene05904:CDS |
| GGTTGTGGGTGTTCCGGCAG+AGG | 0.497560 | 4.4:+3137267 | None:intergenic |
| TCCTCTTCCTGCACCCAAAG+TGG | 0.499712 | 4.4:-3137229 | MS.gene05904:CDS |
| CGATCGAATGGGTGAAGGTG+AGG | 0.502201 | 4.4:-3137388 | None:intergenic |
| TTCTGAAAACTGTAAATGCA+TGG | 0.504558 | 4.4:-3135614 | MS.gene05904:CDS |
| ACTGACCCCACTTTGGGTGC+AGG | 0.507298 | 4.4:+3137222 | None:intergenic |
| ATATAAATGTAGGAGGAGAC+TGG | 0.511871 | 4.4:-3135736 | MS.gene05904:intron |
| TGAAGGAAGTGAAGAGCGAC+AGG | 0.515256 | 4.4:-3135578 | MS.gene05904:CDS |
| GACTGGGGAAGTTAAAGTAT+TGG | 0.517867 | 4.4:-3135719 | MS.gene05904:CDS |
| GACCAAAGGCGTTGAAGTGA+TGG | 0.518047 | 4.4:+3132082 | None:intergenic |
| ATGAGCCATCGACGCAGTTG+AGG | 0.519656 | 4.4:+3133000 | None:intergenic |
| CAGTCTTGTTTCAGAAAATG+GGG | 0.524569 | 4.4:-3132018 | MS.gene05904:CDS |
| GATCGAATGGGTGAAGGTGA+GGG | 0.528000 | 4.4:-3137387 | None:intergenic |
| AAGTGAGTTAGAGACTCAAA+AGG | 0.529599 | 4.4:-3132336 | MS.gene05904:CDS |
| AGAGCAATTACCAAACCAAA+AGG | 0.531316 | 4.4:-3133200 | MS.gene05904:CDS |
| GCGTTCTAAAGTTGCCTCAA+CGG | 0.532916 | 4.4:+3136510 | None:intergenic |
| GGTGCTGCAGGACCTCTGAC+AGG | 0.533479 | 4.4:+3134453 | None:intergenic |
| GCAGGAAGAGGAGGAAGTGT+CGG | 0.537059 | 4.4:+3137240 | None:intergenic |
| CTCTTCCTGCACCCAAAGTG+GGG | 0.540427 | 4.4:-3137227 | MS.gene05904:intron |
| GGAACTCTGGCCGTCCATCA+GGG | 0.541188 | 4.4:-3135428 | MS.gene05904:CDS |
| AGATCTATGCAGAGCAAGAG+AGG | 0.541580 | 4.4:-3132931 | MS.gene05904:CDS |
| GTTGAAGTGATGGCATTGCA+AGG | 0.542129 | 4.4:+3132092 | None:intergenic |
| CAATATGGCGTATCTTCAGC+AGG | 0.547825 | 4.4:-3135530 | MS.gene05904:CDS |
| TTGAAGTGATGGTGTTGCAT+GGG | 0.553400 | 4.4:+3132126 | None:intergenic |
| GCTAAAGTTCCAGGAGACAT+TGG | 0.554665 | 4.4:+3133067 | None:intergenic |
| CCTGTCCCAGTACCTCGTGT+TGG | 0.556568 | 4.4:-3134414 | MS.gene05904:CDS |
| AAAATTGCGAGCAGTCCTCA+TGG | 0.561710 | 4.4:-3136466 | MS.gene05904:CDS |
| TGGGGCGATCGAATGGGTGA+AGG | 0.561905 | 4.4:-3137393 | None:intergenic |
| TAACAATGTTGACAATGAAG+CGG | 0.562048 | 4.4:-3136545 | MS.gene05904:CDS |
| CCTGAAAATTCCAGTTCAGA+TGG | 0.562427 | 4.4:-3133112 | MS.gene05904:CDS |
| TATAAATGTAGGAGGAGACT+GGG | 0.563902 | 4.4:-3135735 | MS.gene05904:intron |
| GATCCATCGTTTGGAAAGCT+AGG | 0.564234 | 4.4:-3135406 | MS.gene05904:CDS |
| CCAACACGAGGTACTGGGAC+AGG | 0.566645 | 4.4:+3134414 | None:intergenic |
| CAAACCAAAAGGAAGCTGAT+GGG | 0.567376 | 4.4:-3133189 | MS.gene05904:CDS |
| ATTCCGTTAAGAAGCTTGCT+AGG | 0.570445 | 4.4:-3137332 | MS.gene05904:CDS |
| CCAAACCAAAAGGAAGCTGA+TGG | 0.575383 | 4.4:-3133190 | MS.gene05904:CDS |
| CAAAGCTCCTTCAGGTGCTG+TGG | 0.576488 | 4.4:+3134243 | None:intergenic |
| AGAGGAGGAAGTGTCGGCGG+TGG | 0.576611 | 4.4:+3137246 | None:intergenic |
| GTTGAAGTGATGGTGTTGCA+TGG | 0.579282 | 4.4:+3132125 | None:intergenic |
| TCACAATTGCCTTATGGACA+AGG | 0.579807 | 4.4:-3132962 | MS.gene05904:CDS |
| TTTAGTGCTAGTATCTGGAC+AGG | 0.580606 | 4.4:-3134214 | MS.gene05904:CDS |
| ACGGTGTTGCAAGGGACCAA+AGG | 0.581749 | 4.4:+3132068 | None:intergenic |
| AATAACGTCGGCAAAGCAGT+TGG | 0.582782 | 4.4:-3132242 | MS.gene05904:CDS |
| TCCAAACGATGGATCCCTGA+TGG | 0.585261 | 4.4:+3135414 | None:intergenic |
| TAGATAAGCACACAGAAGAT+CGG | 0.590669 | 4.4:-3133252 | MS.gene05904:CDS |
| AGCCATCGACGCAGTTGAGG+GGG | 0.590783 | 4.4:+3133003 | None:intergenic |
| GTTGAAGTGACGGTGTTGCA+AGG | 0.590921 | 4.4:+3132059 | None:intergenic |
| GACAGGAGACAAAGATGAAG+AGG | 0.594341 | 4.4:+3134431 | None:intergenic |
| AAGGTCCAACACGAGGTACT+GGG | 0.595130 | 4.4:+3134409 | None:intergenic |
| AACGATGGATCCCTGATGGA+CGG | 0.596545 | 4.4:+3135418 | None:intergenic |
| ACAAGACTGCAAGGGACCAA+AGG | 0.597556 | 4.4:+3132032 | None:intergenic |
| GACCATAGGTGCTGAAGTGA+TGG | 0.600765 | 4.4:+3132214 | None:intergenic |
| GACCATAGGTGTTGAAGTGA+TGG | 0.600889 | 4.4:+3132181 | None:intergenic |
| ATGGTGCTGATGTTCCAAAA+GGG | 0.600938 | 4.4:-3133093 | MS.gene05904:CDS |
| GAGCCATCGACGCAGTTGAG+GGG | 0.602668 | 4.4:+3133002 | None:intergenic |
| ATGGTGTTGCAAGGGACCAT+AGG | 0.603345 | 4.4:+3132167 | None:intergenic |
| ATGGTGTTGCAAGGGACCAT+AGG | 0.603345 | 4.4:+3132200 | None:intergenic |
| TGTCCTAGCTTTCCAAACGA+TGG | 0.604497 | 4.4:+3135403 | None:intergenic |
| GACCAAAGGTGTTGAAGTGA+TGG | 0.604817 | 4.4:+3132115 | None:intergenic |
| AAACCAAAAGGAAGCTGATG+GGG | 0.605517 | 4.4:-3133188 | MS.gene05904:CDS |
| ATGGCATTGCAAGGGACCAA+AGG | 0.608714 | 4.4:+3132101 | None:intergenic |
| AGTATTGGTAAAGCACAACA+AGG | 0.610516 | 4.4:-3135704 | MS.gene05904:CDS |
| AACATTCACAGTACTTCTTG+AGG | 0.610779 | 4.4:+3135656 | None:intergenic |
| TTTGCCGACGTTATTACAGG+TGG | 0.614550 | 4.4:+3132250 | None:intergenic |
| TCATGGAACACGTGATAACA+AGG | 0.615546 | 4.4:-3136449 | MS.gene05904:intron |
| TTGAAGTGACGGTGTTGCAA+GGG | 0.618089 | 4.4:+3132060 | None:intergenic |
| GTATTGGTAAAGCACAACAA+GGG | 0.619872 | 4.4:-3135703 | MS.gene05904:CDS |
| ACTTTGGGTGCAGGAAGAGG+AGG | 0.619897 | 4.4:+3137231 | None:intergenic |
| AAATGGGGAAATTAAGCCGA+AGG | 0.620465 | 4.4:-3132003 | MS.gene05904:CDS |
| GACCAAAGGTGTTGAAGTGA+TGG | 0.620830 | 4.4:+3132148 | None:intergenic |
| GTTGAAGTGATGGTGTTGCA+AGG | 0.625625 | 4.4:+3132158 | None:intergenic |
| GTTGAAGTGATGGTGTTGCA+AGG | 0.625625 | 4.4:+3132191 | None:intergenic |
| GCGTCGGGGATATATTGCGA+TGG | 0.627790 | 4.4:-3136589 | MS.gene05904:CDS |
| TTGAAGTGATGGTGTTGCAA+GGG | 0.633210 | 4.4:+3132159 | None:intergenic |
| TTGAAGTGATGGTGTTGCAA+GGG | 0.633210 | 4.4:+3132192 | None:intergenic |
| ACTGAGGCAGCGCAACAGCA+AGG | 0.636738 | 4.4:-3132281 | MS.gene05904:CDS |
| ATGGTGTTGCATGGGACCAA+AGG | 0.637170 | 4.4:+3132134 | None:intergenic |
| GGCAAGACGAGAAGCCGTTG+AGG | 0.638829 | 4.4:-3136524 | MS.gene05904:CDS |
| TTGAAGTGATGGCATTGCAA+GGG | 0.640906 | 4.4:+3132093 | None:intergenic |
| CAAAGGTGTTGTTGAAGTGA+CGG | 0.642763 | 4.4:+3132049 | None:intergenic |
| CATACAACCACAGCACCTGA+AGG | 0.646661 | 4.4:-3134250 | MS.gene05904:CDS |
| ACAGGAGACAAAGATGAAGA+GGG | 0.650680 | 4.4:+3134432 | None:intergenic |
| GGAAGAGGAGGAAGTGTCGG+CGG | 0.650685 | 4.4:+3137243 | None:intergenic |
| TATCAGGCAAATCCTGTCAG+AGG | 0.651141 | 4.4:-3134465 | MS.gene05904:intron |
| TATTGGTAAAGCACAACAAG+GGG | 0.652902 | 4.4:-3135702 | MS.gene05904:CDS |
| GTGCTGATGTTCCAAAAGGG+AGG | 0.653307 | 4.4:-3133090 | MS.gene05904:CDS |
| AGCTGATGGGGAGAAAGTTG+TGG | 0.668913 | 4.4:-3133176 | MS.gene05904:CDS |
| TTGTTATCACGTGTTCCATG+AGG | 0.679705 | 4.4:+3136451 | None:intergenic |
| TTTCTGAAACAAGACTGCAA+GGG | 0.692177 | 4.4:+3132024 | None:intergenic |
| GGATCCACCTGTAATAACGT+CGG | 0.698709 | 4.4:-3132254 | MS.gene05904:CDS |
| CACTGAAAATACCAGTACTG+AGG | 0.701584 | 4.4:-3132297 | MS.gene05904:CDS |
| AATGTTGAAGGTCCAACACG+AGG | 0.707406 | 4.4:+3134402 | None:intergenic |
| TGGTGGTGATGAATAACCAG+AGG | 0.718034 | 4.4:+3135474 | None:intergenic |
| ATAAATGTAGGAGGAGACTG+GGG | 0.722595 | 4.4:-3135734 | MS.gene05904:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAAATTAATATATGT+GGG | + | chr4.4:3133227-3133246 | None:intergenic | 10.0% |
| !! | AAAAGGAAAAAATGTAAATA+AGG | + | chr4.4:3133300-3133319 | None:intergenic | 15.0% |
| !! | AAGTAAAAAAAAATTAAAGC+CGG | - | chr4.4:3133520-3133539 | MS.gene05904:intron | 15.0% |
| !! | ACAAAAAATTAATATATGTG+GGG | + | chr4.4:3133226-3133245 | None:intergenic | 15.0% |
| !! | GAACAAAAAATTAATATATG+TGG | + | chr4.4:3133228-3133247 | None:intergenic | 15.0% |
| !! | TCTTATTATAATTGAATGAA+TGG | - | chr4.4:3134682-3134701 | MS.gene05904:intron | 15.0% |
| !!! | AATTACTTCATTTTAAATTG+TGG | + | chr4.4:3133368-3133387 | None:intergenic | 15.0% |
| !!! | ACTGAATATTTTTTGAAAAT+TGG | + | chr4.4:3136664-3136683 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTTACTCCTAA+TGG | + | chr4.4:3134120-3134139 | None:intergenic | 15.0% |
| !!! | ATTACTTCATTTTAAATTGT+GGG | + | chr4.4:3133367-3133386 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTTACTCCTAAT+GGG | + | chr4.4:3134119-3134138 | None:intergenic | 15.0% |
| !!! | TCAAAATCAAAATATGTTTT+AGG | + | chr4.4:3135810-3135829 | None:intergenic | 15.0% |
| !!! | TCAAATAAAGTTGATTTATT+TGG | - | chr4.4:3133104-3133123 | MS.gene05904:CDS | 15.0% |
| !!! | TGTTTTATATGAAGAAAATA+TGG | + | chr4.4:3134648-3134667 | None:intergenic | 15.0% |
| !!! | TTTTTATTACTTTGTTATTG+AGG | - | chr4.4:3133178-3133197 | MS.gene05904:CDS | 15.0% |
| !!! | TTTTTATTCTTATGTTTCTA+TGG | - | chr4.4:3133608-3133627 | MS.gene05904:intron | 15.0% |
| !! | AAAAAATTAATATATGTGGG+GGG | + | chr4.4:3133224-3133243 | None:intergenic | 20.0% |
| !! | AAAATGCATCAAACAAAATT+TGG | + | chr4.4:3133131-3133150 | None:intergenic | 20.0% |
| !! | AAATTGAGATTCTTGTTAAT+AGG | - | chr4.4:3132408-3132427 | MS.gene05904:intron | 20.0% |
| !! | AATTAGTGTTTATTTGATTC+AGG | - | chr4.4:3132538-3132557 | MS.gene05904:intron | 20.0% |
| !! | AATTGAGATTCTTGTTAATA+GGG | - | chr4.4:3132409-3132428 | MS.gene05904:intron | 20.0% |
| !! | ATTAAACATGAGTTTGATAT+TGG | + | chr4.4:3136078-3136097 | None:intergenic | 20.0% |
| !! | CAAAAAATTAATATATGTGG+GGG | + | chr4.4:3133225-3133244 | None:intergenic | 20.0% |
| !! | TAATTAAGCACTTCAAAAAA+AGG | + | chr4.4:3132523-3132542 | None:intergenic | 20.0% |
| !! | TGAAATTAGGAAAAGAAATT+AGG | + | chr4.4:3136991-3137010 | None:intergenic | 20.0% |
| !!! | AAAATTTCTTGAGATTTGTT+TGG | + | chr4.4:3135365-3135384 | None:intergenic | 20.0% |
| !!! | AACATATTTTGATTTTGAAG+TGG | - | chr4.4:3135812-3135831 | MS.gene05904:intron | 20.0% |
| !!! | AATTCAGAGATTTTCTTAAT+AGG | - | chr4.4:3136478-3136497 | MS.gene05904:CDS | 20.0% |
| !!! | ATTCAGAGATTTTCTTAATA+GGG | - | chr4.4:3136479-3136498 | MS.gene05904:CDS | 20.0% |
| !!! | ATTTTTTTTTACTCCTAATG+GGG | + | chr4.4:3134118-3134137 | None:intergenic | 20.0% |
| !!! | GATTTGCTTATATTTTGTTA+CGG | + | chr4.4:3133080-3133099 | None:intergenic | 20.0% |
| !!! | GCTTATCTATTAAATTTTTC+TGG | + | chr4.4:3136110-3136129 | None:intergenic | 20.0% |
| !!! | GGTTTTATGAAATTTTTGTA+AGG | + | chr4.4:3136567-3136586 | None:intergenic | 20.0% |
| !!! | TATTTTTTTTCATGCTTATC+AGG | - | chr4.4:3134892-3134911 | MS.gene05904:intron | 20.0% |
| !!! | TGTATTCTTTTGAAGTTTTT+GGG | - | chr4.4:3136003-3136022 | MS.gene05904:intron | 20.0% |
| ! | AAAAGGTTGTATTTACCATT+TGG | + | chr4.4:3135715-3135734 | None:intergenic | 25.0% |
| ! | AATAAATACACTACAGAAGT+TGG | + | chr4.4:3136878-3136897 | None:intergenic | 25.0% |
| ! | AATAATTCTGAACCTTACTT+TGG | + | chr4.4:3135575-3135594 | None:intergenic | 25.0% |
| ! | AATGCATCTCTCAATTTAAT+TGG | + | chr4.4:3134145-3134164 | None:intergenic | 25.0% |
| ! | AATTAGAATAGCATTTCCTT+GGG | - | chr4.4:3134467-3134486 | MS.gene05904:intron | 25.0% |
| ! | ATGCATCTCTCAATTTAATT+GGG | + | chr4.4:3134144-3134163 | None:intergenic | 25.0% |
| ! | ATGGACTTCAATATAAATGT+AGG | - | chr4.4:3133627-3133646 | MS.gene05904:intron | 25.0% |
| ! | CAATTGAATAGAATAATCGA+AGG | + | chr4.4:3136035-3136054 | None:intergenic | 25.0% |
| ! | CTTCGATTATTCTATTCAAT+TGG | - | chr4.4:3136033-3136052 | MS.gene05904:intron | 25.0% |
| ! | TTCAAAATTTATGTACAGGT+AGG | - | chr4.4:3135000-3135019 | MS.gene05904:intron | 25.0% |
| ! | TTGAAGTGGAATTAATTCTA+TGG | - | chr4.4:3135826-3135845 | MS.gene05904:intron | 25.0% |
| ! | TTTACAAGTATCTTAACAAC+AGG | + | chr4.4:3133485-3133504 | None:intergenic | 25.0% |
| !! | ACCTGTACATAAATTTTGAA+GGG | + | chr4.4:3135000-3135019 | None:intergenic | 25.0% |
| !! | ATTGAGGATTTTTGTTGATA+AGG | - | chr4.4:3133194-3133213 | MS.gene05904:CDS | 25.0% |
| !! | CAAATAACACAATTGATGAT+GGG | + | chr4.4:3135224-3135243 | None:intergenic | 25.0% |
| !! | TAAAGTGTTACAAATAAAGC+AGG | + | chr4.4:3136963-3136982 | None:intergenic | 25.0% |
| !! | TACCTGTACATAAATTTTGA+AGG | + | chr4.4:3135001-3135020 | None:intergenic | 25.0% |
| !! | TGCTTATATTTTGTTACAGA+AGG | - | chr4.4:3133151-3133170 | MS.gene05904:CDS | 25.0% |
| !! | TTTTTCCTTTTATTAGAAGC+AGG | - | chr4.4:3133309-3133328 | MS.gene05904:intron | 25.0% |
| !!! | ATTTTGGAAATTAGGTAAAC+TGG | - | chr4.4:3134034-3134053 | MS.gene05904:intron | 25.0% |
| !!! | GTGTATTCTTTTGAAGTTTT+TGG | - | chr4.4:3136002-3136021 | MS.gene05904:intron | 25.0% |
| !!! | GTTGTGAATTTTTTGTATTG+AGG | - | chr4.4:3132989-3133008 | MS.gene05904:CDS | 25.0% |
| !!! | TATTGGTTCAAATTTGATGA+TGG | - | chr4.4:3132450-3132469 | MS.gene05904:intron | 25.0% |
| !!! | TTGAGGATTTTTGTTGATAA+GGG | - | chr4.4:3133195-3133214 | MS.gene05904:CDS | 25.0% |
| !!! | TTTTGGAAATTAGGTAAACT+GGG | - | chr4.4:3134035-3134054 | MS.gene05904:intron | 25.0% |
| AAAAGCGAAGTCTAAGTTAT+TGG | - | chr4.4:3132433-3132452 | MS.gene05904:intron | 30.0% | |
| AAACGAAAACTAAAATGCAC+TGG | + | chr4.4:3133277-3133296 | None:intergenic | 30.0% | |
| AATTTAGAGAACTGTGATAC+TGG | - | chr4.4:3136635-3136654 | MS.gene05904:intron | 30.0% | |
| AATTTATGTACAGGTAGGAT+TGG | - | chr4.4:3135005-3135024 | MS.gene05904:intron | 30.0% | |
| ACAAAATTTCAGCCAAAGTA+AGG | - | chr4.4:3135560-3135579 | MS.gene05904:CDS | 30.0% | |
| AGAAGAAAAGTCTCCAAAAA+AGG | + | chr4.4:3132476-3132495 | None:intergenic | 30.0% | |
| ATGTCATAATTCCATACCAT+TGG | + | chr4.4:3133454-3133473 | None:intergenic | 30.0% | |
| CAAAAACACTTACAGGTATA+TGG | - | chr4.4:3135185-3135204 | MS.gene05904:intron | 30.0% | |
| CAATTAGAATAGCATTTCCT+TGG | - | chr4.4:3134466-3134485 | MS.gene05904:intron | 30.0% | |
| CTTAATAGGGTTATCACTAT+GGG | - | chr4.4:3136492-3136511 | MS.gene05904:CDS | 30.0% | |
| GACTTCAATATAAATGTAGG+AGG | - | chr4.4:3133630-3133649 | MS.gene05904:intron | 30.0% | |
| GCAAATAACACAATTGATGA+TGG | + | chr4.4:3135225-3135244 | None:intergenic | 30.0% | |
| TAACAATGTTGACAATGAAG+CGG | - | chr4.4:3132828-3132847 | MS.gene05904:intron | 30.0% | |
| TAGATAACTGTGGTGAATTT+AGG | - | chr4.4:3135899-3135918 | MS.gene05904:intron | 30.0% | |
| TAGCAGCTTAATTTAATGAG+CGG | - | chr4.4:3135384-3135403 | MS.gene05904:intron | 30.0% | |
| TCTTAATAGGGTTATCACTA+TGG | - | chr4.4:3136491-3136510 | MS.gene05904:CDS | 30.0% | |
| TGGAGATCAAAACAACAATA+TGG | - | chr4.4:3133828-3133847 | MS.gene05904:intron | 30.0% | |
| TTTCAGACAGTTAAACATTG+AGG | + | chr4.4:3135942-3135961 | None:intergenic | 30.0% | |
| TTTGGAAATTAGGTAAACTG+GGG | - | chr4.4:3134036-3134055 | MS.gene05904:intron | 30.0% | |
| ! | AAAAATTCAGTCTTTTCTCG+TGG | - | chr4.4:3134601-3134620 | MS.gene05904:intron | 30.0% |
| ! | ACGAGAAAAGACTGAATTTT+TGG | + | chr4.4:3134602-3134621 | None:intergenic | 30.0% |
| ! | ATATTGTGAATGTTTTGCGT+CGG | - | chr4.4:3132768-3132787 | MS.gene05904:intron | 30.0% |
| ! | ATGGATTGCAAAAACTTTGA+AGG | - | chr4.4:3133778-3133797 | MS.gene05904:intron | 30.0% |
| ! | ATTAACTTGATTGCTGTTGA+AGG | - | chr4.4:3135083-3135102 | MS.gene05904:intron | 30.0% |
| ! | GTAAAACTTGATAATACTGC+AGG | - | chr4.4:3133997-3134016 | MS.gene05904:intron | 30.0% |
| ! | GTTAAACATTGAGGTATCTT+AGG | + | chr4.4:3135933-3135952 | None:intergenic | 30.0% |
| ! | GTTTTCAGAACAAAGAATGT+TGG | + | chr4.4:3133749-3133768 | None:intergenic | 30.0% |
| ! | TAGGTTTACCAAACATTTTG+AGG | + | chr4.4:3135854-3135873 | None:intergenic | 30.0% |
| ! | TCTTGAGATTTGTTTGGAAA+GGG | + | chr4.4:3135359-3135378 | None:intergenic | 30.0% |
| ! | TGAGTGTACTGATATTGATT+TGG | - | chr4.4:3135293-3135312 | MS.gene05904:intron | 30.0% |
| ! | TTATATTTTGTTACGGAGGA+GGG | + | chr4.4:3133073-3133092 | None:intergenic | 30.0% |
| ! | TTCTGAAAACTGTAAATGCA+TGG | - | chr4.4:3133759-3133778 | MS.gene05904:intron | 30.0% |
| ! | TTCTTGAGATTTGTTTGGAA+AGG | + | chr4.4:3135360-3135379 | None:intergenic | 30.0% |
| ! | TTGCTTATATTTTGTTACGG+AGG | + | chr4.4:3133077-3133096 | None:intergenic | 30.0% |
| !! | ATACAGTTTTGTGTTTTCGT+CGG | - | chr4.4:3135258-3135277 | MS.gene05904:intron | 30.0% |
| !! | ATGGTTCTGAACTTTGATAA+AGG | - | chr4.4:3136702-3136721 | MS.gene05904:intron | 30.0% |
| !! | GATGTTTTGAGTAAGCAAAA+AGG | + | chr4.4:3133576-3133595 | None:intergenic | 30.0% |
| !! | GGTGTCATTGTAAAAAATCT+GGG | - | chr4.4:3133692-3133711 | MS.gene05904:intron | 30.0% |
| !! | GTACTGATATTGATTTGGAA+AGG | - | chr4.4:3135298-3135317 | MS.gene05904:intron | 30.0% |
| !! | TATACCTGTAAGTGTTTTTG+TGG | + | chr4.4:3135185-3135204 | None:intergenic | 30.0% |
| !! | TTGAGTTGAAATGAACACAT+TGG | + | chr4.4:3134224-3134243 | None:intergenic | 30.0% |
| !! | TTTTGAGTAAGCAAAAAGGA+AGG | + | chr4.4:3133572-3133591 | None:intergenic | 30.0% |
| !!! | AATTTGATGATGGCCTTTTT+TGG | - | chr4.4:3132460-3132479 | MS.gene05904:intron | 30.0% |
| !!! | AGGGGTTTATTTTGGAAATT+AGG | - | chr4.4:3134026-3134045 | MS.gene05904:intron | 30.0% |
| !!! | GAACTAGCAATTTAGCTTTT+GGG | + | chr4.4:3134791-3134810 | None:intergenic | 30.0% |
| !!! | TATTGTTGTTTTGATCTCCA+TGG | + | chr4.4:3133828-3133847 | None:intergenic | 30.0% |
| !!! | TGAACTAGCAATTTAGCTTT+TGG | + | chr4.4:3134792-3134811 | None:intergenic | 30.0% |
| AAAGTCCAAATGCTATGAAC+GGG | + | chr4.4:3136591-3136610 | None:intergenic | 35.0% | |
| AAATCAAGTATGTGACTGTG+AGG | - | chr4.4:3134709-3134728 | MS.gene05904:intron | 35.0% | |
| AACACATTGGACCAAATCAA+GGG | + | chr4.4:3134211-3134230 | None:intergenic | 35.0% | |
| AACATTCACAGTACTTCTTG+AGG | + | chr4.4:3133720-3133739 | None:intergenic | 35.0% | |
| AACTCTGTGGTTGAGAAATT+AGG | - | chr4.4:3132336-3132355 | MS.gene05904:CDS | 35.0% | |
| AAGTGAGTTAGAGACTCAAA+AGG | - | chr4.4:3137037-3137056 | MS.gene05904:intron | 35.0% | |
| AATTAGGTAAACTGGGGAAA+TGG | - | chr4.4:3134042-3134061 | MS.gene05904:intron | 35.0% | |
| ACATCTTCACAATTGCCTTA+TGG | - | chr4.4:3136405-3136424 | MS.gene05904:intron | 35.0% | |
| AGAGCAATTACCAAACCAAA+AGG | - | chr4.4:3136173-3136192 | MS.gene05904:intron | 35.0% | |
| AGCAGCTTAATTTAATGAGC+GGG | - | chr4.4:3135385-3135404 | MS.gene05904:intron | 35.0% | |
| AGCGAGAAAAAGAAAAGGTT+CGG | - | chr4.4:3133924-3133943 | MS.gene05904:intron | 35.0% | |
| ATATAAATGTAGGAGGAGAC+TGG | - | chr4.4:3133637-3133656 | MS.gene05904:intron | 35.0% | |
| ATCACTATGGGCGAAATAAA+TGG | - | chr4.4:3136504-3136523 | MS.gene05904:CDS | 35.0% | |
| ATCCTCCTGCTTCTAATAAA+AGG | + | chr4.4:3133317-3133336 | None:intergenic | 35.0% | |
| ATGAAGCCTTTCTTTCCAAT+AGG | + | chr4.4:3134283-3134302 | None:intergenic | 35.0% | |
| ATTCAGTTTGCATCGAAGAT+AGG | - | chr4.4:3136677-3136696 | MS.gene05904:intron | 35.0% | |
| ATTTGTCAATCCATTGAGCT+TGG | + | chr4.4:3135600-3135619 | None:intergenic | 35.0% | |
| CACTATCCTATTGGAAAGAA+AGG | - | chr4.4:3134274-3134293 | MS.gene05904:intron | 35.0% | |
| GAAAGTCCAAATGCTATGAA+CGG | + | chr4.4:3136592-3136611 | None:intergenic | 35.0% | |
| GAATTATTCACCAAGCTCAA+TGG | - | chr4.4:3135587-3135606 | MS.gene05904:CDS | 35.0% | |
| GATATATGCTTCCCTTGATT+TGG | - | chr4.4:3134197-3134216 | MS.gene05904:CDS | 35.0% | |
| GATGCAAATCCACTCTTATA+GGG | + | chr4.4:3133418-3133437 | None:intergenic | 35.0% | |
| GCCCTTCAAAATTTATGTAC+AGG | - | chr4.4:3134996-3135015 | MS.gene05904:intron | 35.0% | |
| GTCTCAAAACACTATCCTAT+TGG | - | chr4.4:3134265-3134284 | MS.gene05904:CDS | 35.0% | |
| TAACTGTGGTGAATTTAGGA+TGG | - | chr4.4:3135903-3135922 | MS.gene05904:intron | 35.0% | |
| TAGATAAGCACACAGAAGAT+CGG | - | chr4.4:3136121-3136140 | MS.gene05904:intron | 35.0% | |
| TATAAATGTAGGAGGAGACT+GGG | - | chr4.4:3133638-3133657 | MS.gene05904:intron | 35.0% | |
| TATTGGTAAAGCACAACAAG+GGG | - | chr4.4:3133671-3133690 | MS.gene05904:intron | 35.0% | |
| TCATAATTCCATACCATTGG+AGG | + | chr4.4:3133451-3133470 | None:intergenic | 35.0% | |
| TCATGTAACATTTCCCCATT+AGG | - | chr4.4:3134102-3134121 | MS.gene05904:intron | 35.0% | |
| TGATGCAAATCCACTCTTAT+AGG | + | chr4.4:3133419-3133438 | None:intergenic | 35.0% | |
| TGCTTGTCATTAGATAACTG+TGG | - | chr4.4:3135889-3135908 | MS.gene05904:intron | 35.0% | |
| TTCAGTTTGCATCGAAGATA+GGG | - | chr4.4:3136678-3136697 | MS.gene05904:intron | 35.0% | |
| TTGACATAGCAATAGAAAGC+AGG | + | chr4.4:3136836-3136855 | None:intergenic | 35.0% | |
| TTGTTGTATCATCAACTCTG+TGG | - | chr4.4:3132323-3132342 | MS.gene05904:CDS | 35.0% | |
| TTGTTTGGAAAGGGAAAAAG+CGG | + | chr4.4:3135350-3135369 | None:intergenic | 35.0% | |
| ! | AGCATCTTTTGTCTCAAAGT+TGG | + | chr4.4:3132595-3132614 | None:intergenic | 35.0% |
| ! | CTTATATTTTGTTACGGAGG+AGG | + | chr4.4:3133074-3133093 | None:intergenic | 35.0% |
| ! | GACTTTGATTTAGGAGATTC+TGG | + | chr4.4:3132567-3132586 | None:intergenic | 35.0% |
| ! | GCAGGCTTAACTTTTTGTAA+CGG | - | chr4.4:3132950-3132969 | MS.gene05904:CDS | 35.0% |
| ! | GCATCTTTTGTCTCAAAGTT+GGG | + | chr4.4:3132594-3132613 | None:intergenic | 35.0% |
| ! | GCTTAACTTTTTGTAACGGT+TGG | - | chr4.4:3132954-3132973 | MS.gene05904:CDS | 35.0% |
| ! | GTATTGGTAAAGCACAACAA+GGG | - | chr4.4:3133670-3133689 | MS.gene05904:intron | 35.0% |
| ! | GTTTTCATTGAGAACCAGTA+GGG | + | chr4.4:3134537-3134556 | None:intergenic | 35.0% |
| ! | TATTGTGAATGTTTTGCGTC+GGG | - | chr4.4:3132769-3132788 | MS.gene05904:intron | 35.0% |
| ! | TGGTAATTGCTCTTGATTTG+AGG | + | chr4.4:3136166-3136185 | None:intergenic | 35.0% |
| ! | TTCCTTTTATTAGAAGCAGG+AGG | - | chr4.4:3133312-3133331 | MS.gene05904:intron | 35.0% |
| ! | TTGGGTCTTGACTTTGATTT+AGG | + | chr4.4:3132576-3132595 | None:intergenic | 35.0% |
| ! | TTTCAGTGCGATTGATGATT+GGG | + | chr4.4:3137064-3137083 | None:intergenic | 35.0% |
| ! | TTTTCATTGAGAACCAGTAG+GGG | + | chr4.4:3134536-3134555 | None:intergenic | 35.0% |
| ! | TTTTCCAACACAAGAAATGC+CGG | + | chr4.4:3133542-3133561 | None:intergenic | 35.0% |
| !! | AACACTTCGTCTCTGAAATT+AGG | + | chr4.4:3137004-3137023 | None:intergenic | 35.0% |
| !! | AAGCTCAATGGATTGACAAA+TGG | - | chr4.4:3135599-3135618 | MS.gene05904:CDS | 35.0% |
| !! | AGTATTGGTAAAGCACAACA+AGG | - | chr4.4:3133669-3133688 | MS.gene05904:intron | 35.0% |
| !! | CAGTCTTGTTTCAGAAAATG+GGG | - | chr4.4:3137355-3137374 | MS.gene05904:CDS | 35.0% |
| !! | GCAGTCTTGTTTCAGAAAAT+GGG | - | chr4.4:3137354-3137373 | MS.gene05904:CDS | 35.0% |
| !! | GGGTGTCATTGTAAAAAATC+TGG | - | chr4.4:3133691-3133710 | MS.gene05904:intron | 35.0% |
| !! | TGAGAGTTTGATTTGCCAAA+TGG | - | chr4.4:3135697-3135716 | MS.gene05904:CDS | 35.0% |
| !! | TGCAGTCTTGTTTCAGAAAA+TGG | - | chr4.4:3137353-3137372 | MS.gene05904:CDS | 35.0% |
| !! | TTTCTGAAACAAGACTGCAA+GGG | + | chr4.4:3137352-3137371 | None:intergenic | 35.0% |
| !! | TTTTCAGTGCGATTGATGAT+TGG | + | chr4.4:3137065-3137084 | None:intergenic | 35.0% |
| !!! | GAATCCAATTGTGCGTTTTT+TGG | + | chr4.4:3132025-3132044 | None:intergenic | 35.0% |
| !!! | TCTGTTTTAGTGCTAGTATC+TGG | - | chr4.4:3135154-3135173 | MS.gene05904:intron | 35.0% |
| !!! | TTGCACTGTTTTTGCTTCTT+TGG | + | chr4.4:3132621-3132640 | None:intergenic | 35.0% |
| !!! | TTTTCTGAAACAAGACTGCA+AGG | + | chr4.4:3137353-3137372 | None:intergenic | 35.0% |
| AAACCAAAAGGAAGCTGATG+GGG | - | chr4.4:3136185-3136204 | MS.gene05904:intron | 40.0% | |
| AAACCTTAAACCTGCACCAA+AGG | + | chr4.4:3134440-3134459 | None:intergenic | 40.0% | |
| AAAGAAAAGGTTCGGAACTC+TGG | - | chr4.4:3133932-3133951 | MS.gene05904:intron | 40.0% | |
| AAATGGGGAAATTAAGCCGA+AGG | - | chr4.4:3137370-3137389 | MS.gene05904:CDS | 40.0% | |
| AACCTTAAACCTGCACCAAA+GGG | + | chr4.4:3134439-3134458 | None:intergenic | 40.0% | |
| AACGCAATCCAAATGCCTTT+AGG | - | chr4.4:3132881-3132900 | MS.gene05904:CDS | 40.0% | |
| AAGTCCAAATGCTATGAACG+GGG | + | chr4.4:3136590-3136609 | None:intergenic | 40.0% | |
| AATCACAAGTTAGTAGCAGC+TGG | + | chr4.4:3136802-3136821 | None:intergenic | 40.0% | |
| ACAGGAGACAAAGATGAAGA+GGG | + | chr4.4:3134944-3134963 | None:intergenic | 40.0% | |
| ACCAAAGAATGAGAAACCCA+AGG | + | chr4.4:3134486-3134505 | None:intergenic | 40.0% | |
| ATAAATGTAGGAGGAGACTG+GGG | - | chr4.4:3133639-3133658 | MS.gene05904:intron | 40.0% | |
| ATAATACTGCAGGCAGTTCA+GGG | - | chr4.4:3134007-3134026 | MS.gene05904:intron | 40.0% | |
| CAAACCAAAAGGAAGCTGAT+GGG | - | chr4.4:3136184-3136203 | MS.gene05904:intron | 40.0% | |
| CAATTGCAGCCAATAAGTTC+CGG | + | chr4.4:3132710-3132729 | None:intergenic | 40.0% | |
| CACATCAATGCTAAAGTTCC+AGG | + | chr4.4:3136318-3136337 | None:intergenic | 40.0% | |
| CACTGAAAATACCAGTACTG+AGG | - | chr4.4:3137076-3137095 | MS.gene05904:intron | 40.0% | |
| CCAGTAGCGAGAAAAAGAAA+AGG | - | chr4.4:3133919-3133938 | MS.gene05904:intron | 40.0% | |
| CCTGAAAATTCCAGTTCAGA+TGG | - | chr4.4:3136261-3136280 | MS.gene05904:intron | 40.0% | |
| CGTTTGACTACACGTAAACA+AGG | + | chr4.4:3135673-3135692 | None:intergenic | 40.0% | |
| CTGCAAAATGCTGTCTCAAT+TGG | + | chr4.4:3134082-3134101 | None:intergenic | 40.0% | |
| CTTCCATCTTTGCTCAATGT+GGG | - | chr4.4:3134327-3134346 | MS.gene05904:intron | 40.0% | |
| GAACACATTGGACCAAATCA+AGG | + | chr4.4:3134212-3134231 | None:intergenic | 40.0% | |
| GACTGGGGAAGTTAAAGTAT+TGG | - | chr4.4:3133654-3133673 | MS.gene05904:intron | 40.0% | |
| GCAAATTACAGCAGATCTCA+TGG | - | chr4.4:3136745-3136764 | MS.gene05904:CDS | 40.0% | |
| GGAATTCACTCTAATCCCTT+TGG | - | chr4.4:3134421-3134440 | MS.gene05904:CDS | 40.0% | |
| GTGAATTCCACTATGAGTGT+CGG | + | chr4.4:3134410-3134429 | None:intergenic | 40.0% | |
| GTGGATTTGCATCAGAAGTT+GGG | - | chr4.4:3133425-3133444 | MS.gene05904:intron | 40.0% | |
| TACCACGATAAGTTCACTTC+TGG | - | chr4.4:3134750-3134769 | MS.gene05904:intron | 40.0% | |
| TATCCCACATTGAGCAAAGA+TGG | + | chr4.4:3134333-3134352 | None:intergenic | 40.0% | |
| TCACAATTGCCTTATGGACA+AGG | - | chr4.4:3136411-3136430 | MS.gene05904:intron | 40.0% | |
| TCATGGAACACGTGATAACA+AGG | - | chr4.4:3132924-3132943 | MS.gene05904:CDS | 40.0% | |
| TCCTTGGGTTTCTCATTCTT+TGG | - | chr4.4:3134482-3134501 | MS.gene05904:intron | 40.0% | |
| TCTTTCGTTCCTTGTCCATA+AGG | + | chr4.4:3136423-3136442 | None:intergenic | 40.0% | |
| TGTTTGGAAAGGGAAAAAGC+GGG | + | chr4.4:3135349-3135368 | None:intergenic | 40.0% | |
| TTGAAGTGATGGCATTGCAA+GGG | + | chr4.4:3137283-3137302 | None:intergenic | 40.0% | |
| TTGAGTCTCTAACTCACTTC+TGG | + | chr4.4:3137036-3137055 | None:intergenic | 40.0% | |
| TTGTTATCACGTGTTCCATG+AGG | + | chr4.4:3132925-3132944 | None:intergenic | 40.0% | |
| TTTAGTGCTAGTATCTGGAC+AGG | - | chr4.4:3135159-3135178 | MS.gene05904:intron | 40.0% | |
| TTTCATTGAGAACCAGTAGG+GGG | + | chr4.4:3134535-3134554 | None:intergenic | 40.0% | |
| TTTGAAGGGCCTAATGTTGA+AGG | + | chr4.4:3134986-3135005 | None:intergenic | 40.0% | |
| TTTGCATCGAAGATAGGGAA+TGG | - | chr4.4:3136683-3136702 | MS.gene05904:intron | 40.0% | |
| ! | AGTGGATTTGCATCAGAAGT+TGG | - | chr4.4:3133424-3133443 | MS.gene05904:intron | 40.0% |
| ! | ATTCCGTTAAGAAGCTTGCT+AGG | - | chr4.4:3132041-3132060 | MS.gene05904:CDS | 40.0% |
| ! | ATTGTGAATGTTTTGCGTCG+GGG | - | chr4.4:3132770-3132789 | MS.gene05904:intron | 40.0% |
| ! | CAGAACAAAGAATGTTGGCT+TGG | + | chr4.4:3133744-3133763 | None:intergenic | 40.0% |
| ! | CCAAAAGTTTGAGTTTGCGA+TGG | - | chr4.4:3134370-3134389 | MS.gene05904:intron | 40.0% |
| ! | CCATCGCAAACTCAAACTTT+TGG | + | chr4.4:3134373-3134392 | None:intergenic | 40.0% |
| ! | CCATCTGAACTGGAATTTTC+AGG | + | chr4.4:3136264-3136283 | None:intergenic | 40.0% |
| ! | CCTTTTCTTTTTCTCGCTAC+TGG | + | chr4.4:3133922-3133941 | None:intergenic | 40.0% |
| ! | CGTTTTCATTGAGAACCAGT+AGG | + | chr4.4:3134538-3134557 | None:intergenic | 40.0% |
| ! | TTTCTTTTTCTCGCTACTGG+TGG | + | chr4.4:3133919-3133938 | None:intergenic | 40.0% |
| !! | CAAAGGTGTTGTTGAAGTGA+CGG | + | chr4.4:3137327-3137346 | None:intergenic | 40.0% |
| !! | TGAACTGGAATTTTCAGGAC+TGG | + | chr4.4:3136259-3136278 | None:intergenic | 40.0% |
| !! | TTGAAGTGATGGTGTTGCAA+GGG | + | chr4.4:3137184-3137203 | None:intergenic | 40.0% |
| !! | TTGAAGTGATGGTGTTGCAT+GGG | + | chr4.4:3137250-3137269 | None:intergenic | 40.0% |
| !!! | ATTTTCGGCCTAAAGGCATT+TGG | + | chr4.4:3132892-3132911 | None:intergenic | 40.0% |
| !!! | CAGGACTGGTTTTATCAGTT+TGG | + | chr4.4:3136245-3136264 | None:intergenic | 40.0% |
| !!! | CCAATTGTGCGTTTTTTGGA+GGG | + | chr4.4:3132021-3132040 | None:intergenic | 40.0% |
| !!! | TCCAATTGTGCGTTTTTTGG+AGG | + | chr4.4:3132022-3132041 | None:intergenic | 40.0% |
| AAAATTGCGAGCAGTCCTCA+TGG | - | chr4.4:3132907-3132926 | MS.gene05904:CDS | 45.0% | |
| AAACAGAGCAAAGCTCCTTC+AGG | + | chr4.4:3135141-3135160 | None:intergenic | 45.0% | |
| AAAGCCGGCATTTCTTGTGT+TGG | - | chr4.4:3133535-3133554 | MS.gene05904:intron | 45.0% | |
| AACAGACAATGATGCGCTAG+CGG | + | chr4.4:3133047-3133066 | None:intergenic | 45.0% | |
| AATAACGTCGGCAAAGCAGT+TGG | - | chr4.4:3137131-3137150 | MS.gene05904:intron | 45.0% | |
| AATCCACTCTTATAGGGACG+TGG | + | chr4.4:3133412-3133431 | None:intergenic | 45.0% | |
| AATGTTGAAGGTCCAACACG+AGG | + | chr4.4:3134974-3134993 | None:intergenic | 45.0% | |
| AGATCTATGCAGAGCAAGAG+AGG | - | chr4.4:3136442-3136461 | MS.gene05904:intron | 45.0% | |
| AGCTCCAGTTATAGCAGCAT+TGG | + | chr4.4:3133872-3133891 | None:intergenic | 45.0% | |
| AGTCCAAATGCTATGAACGG+GGG | + | chr4.4:3136589-3136608 | None:intergenic | 45.0% | |
| CAATATGGCGTATCTTCAGC+AGG | - | chr4.4:3133843-3133862 | MS.gene05904:intron | 45.0% | |
| CACCATCACTTCAACACCTA+TGG | - | chr4.4:3137190-3137209 | MS.gene05904:intron | 45.0% | |
| CACCATCACTTCAACACCTT+TGG | - | chr4.4:3137223-3137242 | MS.gene05904:intron | 45.0% | |
| CACGTGATAACAAGGTATGC+AGG | - | chr4.4:3132932-3132951 | MS.gene05904:CDS | 45.0% | |
| CAGGCCACAAAAACACTTAC+AGG | - | chr4.4:3135178-3135197 | MS.gene05904:intron | 45.0% | |
| CCAAACCAAAAGGAAGCTGA+TGG | - | chr4.4:3136183-3136202 | MS.gene05904:intron | 45.0% | |
| CCCTCCAAAAAACGCACAAT+TGG | - | chr4.4:3132018-3132037 | MS.gene05904:CDS | 45.0% | |
| CGTCACTTCAACAACACCTT+TGG | - | chr4.4:3137325-3137344 | MS.gene05904:CDS | 45.0% | |
| CGTGTTGGACCTTCAACATT+AGG | - | chr4.4:3134974-3134993 | MS.gene05904:intron | 45.0% | |
| CTATGGCGCCTCAAAATGTT+TGG | - | chr4.4:3135843-3135862 | MS.gene05904:intron | 45.0% | |
| CTCTGTAGGAAAAGCAGGAA+AGG | - | chr4.4:3135755-3135774 | MS.gene05904:intron | 45.0% | |
| CTGCCTAGCAAGCTTCTTAA+CGG | + | chr4.4:3132047-3132066 | None:intergenic | 45.0% | |
| GACAAGCAATCCTGACAACT+GGG | + | chr4.4:3135877-3135896 | None:intergenic | 45.0% | |
| GACAGGAGACAAAGATGAAG+AGG | + | chr4.4:3134945-3134964 | None:intergenic | 45.0% | |
| GACCAGAAGTGAACTTATCG+TGG | + | chr4.4:3134755-3134774 | None:intergenic | 45.0% | |
| GATAATACTGCAGGCAGTTC+AGG | - | chr4.4:3134006-3134025 | MS.gene05904:intron | 45.0% | |
| GATCCATCGTTTGGAAAGCT+AGG | - | chr4.4:3133967-3133986 | MS.gene05904:intron | 45.0% | |
| GCTAAAGTTCCAGGAGACAT+TGG | + | chr4.4:3136309-3136328 | None:intergenic | 45.0% | |
| GCTGCTATAACTGGAGCTAT+TGG | - | chr4.4:3133874-3133893 | MS.gene05904:intron | 45.0% | |
| GCTTCCATCTTTGCTCAATG+TGG | - | chr4.4:3134326-3134345 | MS.gene05904:intron | 45.0% | |
| GGATCCACCTGTAATAACGT+CGG | - | chr4.4:3137119-3137138 | MS.gene05904:intron | 45.0% | |
| GTTGAAGTGATGGCATTGCA+AGG | + | chr4.4:3137284-3137303 | None:intergenic | 45.0% | |
| GTTTGGAAAGCTAGGACAAC+AGG | - | chr4.4:3133975-3133994 | MS.gene05904:intron | 45.0% | |
| GTTTGGAAAGGGAAAAAGCG+GGG | + | chr4.4:3135348-3135367 | None:intergenic | 45.0% | |
| TAAACAGCAGCTTCCTCTGT+AGG | - | chr4.4:3135741-3135760 | MS.gene05904:intron | 45.0% | |
| TAATACTGCAGGCAGTTCAG+GGG | - | chr4.4:3134008-3134027 | MS.gene05904:intron | 45.0% | |
| TATCAGGCAAATCCTGTCAG+AGG | - | chr4.4:3134908-3134927 | MS.gene05904:intron | 45.0% | |
| TGACAAGCAATCCTGACAAC+TGG | + | chr4.4:3135878-3135897 | None:intergenic | 45.0% | |
| TGCTTTGCCGACGTTATTAC+AGG | + | chr4.4:3137129-3137148 | None:intergenic | 45.0% | |
| TTCATTGAGAACCAGTAGGG+GGG | + | chr4.4:3134534-3134553 | None:intergenic | 45.0% | |
| TTTGCCGACGTTATTACAGG+TGG | + | chr4.4:3137126-3137145 | None:intergenic | 45.0% | |
| ! | ATCCCTTTGGTGCAGGTTTA+AGG | - | chr4.4:3134434-3134453 | MS.gene05904:CDS | 45.0% |
| ! | CAGCTCGATTTCAACGCTTT+TGG | - | chr4.4:3132064-3132083 | MS.gene05904:CDS | 45.0% |
| ! | CGGAACTTATTGGCTGCAAT+TGG | - | chr4.4:3132708-3132727 | MS.gene05904:intron | 45.0% |
| ! | CTCGATTTCAACGCTTTTGG+TGG | - | chr4.4:3132067-3132086 | MS.gene05904:CDS | 45.0% |
| ! | GCTGCTGTTTACAGCTCAAA+AGG | + | chr4.4:3135732-3135751 | None:intergenic | 45.0% |
| ! | GGCAGTTCAGGGGTTTATTT+TGG | - | chr4.4:3134018-3134037 | MS.gene05904:intron | 45.0% |
| ! | TGAGCGGGCATTGTCTATTA+TGG | - | chr4.4:3135400-3135419 | MS.gene05904:CDS | 45.0% |
| ! | TGAGGACTGCTCGCAATTTT+CGG | + | chr4.4:3132907-3132926 | None:intergenic | 45.0% |
| ! | TGGTGGTGATGAATAACCAG+AGG | + | chr4.4:3133902-3133921 | None:intergenic | 45.0% |
| ! | TGTCCTAGCTTTCCAAACGA+TGG | + | chr4.4:3133973-3133992 | None:intergenic | 45.0% |
| !! | AGACAGTCTAGCTCTCTTCA+TGG | + | chr4.4:3134249-3134268 | None:intergenic | 45.0% |
| !! | CCATCAGCTTCCTTTTGGTT+TGG | + | chr4.4:3136186-3136205 | None:intergenic | 45.0% |
| !! | CTTTCCTGCTTTTCCTACAG+AGG | + | chr4.4:3135757-3135776 | None:intergenic | 45.0% |
| !! | GACAGTCTAGCTCTCTTCAT+GGG | + | chr4.4:3134248-3134267 | None:intergenic | 45.0% |
| !! | GACCAAAGGTGTTGAAGTGA+TGG | + | chr4.4:3137228-3137247 | None:intergenic | 45.0% |
| !! | GACCATAGGTGTTGAAGTGA+TGG | + | chr4.4:3137195-3137214 | None:intergenic | 45.0% |
| !! | GCGTTCTAAAGTTGCCTCAA+CGG | + | chr4.4:3132866-3132885 | None:intergenic | 45.0% |
| !! | GTTGAAGTGATGGTGTTGCA+AGG | + | chr4.4:3137185-3137204 | None:intergenic | 45.0% |
| !! | GTTGAAGTGATGGTGTTGCA+TGG | + | chr4.4:3137185-3137204 | None:intergenic | 45.0% |
| !! | TTGAAGTGACGGTGTTGCAA+GGG | + | chr4.4:3137316-3137335 | None:intergenic | 45.0% |
| AACCCCCCGTTCATAGCATT+TGG | - | chr4.4:3136583-3136602 | MS.gene05904:CDS | 50.0% | |
| AACGATGGATCCCTGATGGA+CGG | + | chr4.4:3133958-3133977 | None:intergenic | 50.0% | |
| AAGCTTCCTGCAGTTGAGAG+TGG | - | chr4.4:3134815-3134834 | MS.gene05904:intron | 50.0% | |
| AAGTTGGGCCTCCAATGGTA+TGG | - | chr4.4:3133440-3133459 | MS.gene05904:intron | 50.0% | |
| ACAAGACTGCAAGGGACCAA+AGG | + | chr4.4:3137344-3137363 | None:intergenic | 50.0% | |
| AGCAATCCTGACAACTGGGT+AGG | + | chr4.4:3135873-3135892 | None:intergenic | 50.0% | |
| AGCTGATGGGGAGAAAGTTG+TGG | - | chr4.4:3136197-3136216 | MS.gene05904:intron | 50.0% | |
| ATCAGAAGTTGGGCCTCCAA+TGG | - | chr4.4:3133435-3133454 | MS.gene05904:intron | 50.0% | |
| ATGGCATTGCAAGGGACCAA+AGG | + | chr4.4:3137275-3137294 | None:intergenic | 50.0% | |
| CAACCACGTCCCTATAAGAG+TGG | - | chr4.4:3133406-3133425 | MS.gene05904:intron | 50.0% | |
| CAAGTATGTGACTGTGAGGC+TGG | - | chr4.4:3134713-3134732 | MS.gene05904:intron | 50.0% | |
| CACCATCACTTCAGCACCTA+TGG | - | chr4.4:3137157-3137176 | MS.gene05904:intron | 50.0% | |
| CAGCCAATAAGTTCCGGCAA+AGG | + | chr4.4:3132704-3132723 | None:intergenic | 50.0% | |
| CATACAACCACAGCACCTGA+AGG | - | chr4.4:3135123-3135142 | MS.gene05904:intron | 50.0% | |
| CCTAAGACTGACCCCACTTT+GGG | + | chr4.4:3132160-3132179 | None:intergenic | 50.0% | |
| GCAGCCAATGCTGCTATAAC+TGG | - | chr4.4:3133865-3133884 | MS.gene05904:intron | 50.0% | |
| GCGCAACAACAAGTGCATAG+AGG | + | chr4.4:3132682-3132701 | None:intergenic | 50.0% | |
| GCTTCAGTCGTCGTAGCAAA+AGG | + | chr4.4:3134561-3134580 | None:intergenic | 50.0% | |
| GCTTCCTCTGTAGGAAAAGC+AGG | - | chr4.4:3135750-3135769 | MS.gene05904:intron | 50.0% | |
| GGGAAAAAGCGGGGTAAATG+TGG | + | chr4.4:3135339-3135358 | None:intergenic | 50.0% | |
| GGTAAACCTACCCAGTTGTC+AGG | - | chr4.4:3135864-3135883 | MS.gene05904:intron | 50.0% | |
| GTCCAAATGCTATGAACGGG+GGG | + | chr4.4:3136588-3136607 | None:intergenic | 50.0% | |
| TAGCTTCCACTCTCAACTGC+AGG | + | chr4.4:3134824-3134843 | None:intergenic | 50.0% | |
| TCATTGAGAACCAGTAGGGG+GGG | + | chr4.4:3134533-3134552 | None:intergenic | 50.0% | |
| TCCAAACGATGGATCCCTGA+TGG | + | chr4.4:3133962-3133981 | None:intergenic | 50.0% | |
| TCCATCAGGGATCCATCGTT+TGG | - | chr4.4:3133958-3133977 | MS.gene05904:intron | 50.0% | |
| TGAAGGAAGTGAAGAGCGAC+AGG | - | chr4.4:3133795-3133814 | MS.gene05904:intron | 50.0% | |
| TGCCATCACTTCAACGCCTT+TGG | - | chr4.4:3137289-3137308 | MS.gene05904:CDS | 50.0% | |
| ! | AAGGTCCAACACGAGGTACT+GGG | + | chr4.4:3134967-3134986 | None:intergenic | 50.0% |
| ! | CACTCTAATCCCTTTGGTGC+AGG | - | chr4.4:3134427-3134446 | MS.gene05904:CDS | 50.0% |
| ! | GCTCGCAATTTTCGGCCTAA+AGG | + | chr4.4:3132899-3132918 | None:intergenic | 50.0% |
| ! | TCTCCCCATCAGCTTCCTTT+TGG | + | chr4.4:3136191-3136210 | None:intergenic | 50.0% |
| !! | AAAGATGAAGAGGGTGCTGC+AGG | + | chr4.4:3134935-3134954 | None:intergenic | 50.0% |
| !! | ACTGGAGCTATTGGTTCCTC+TGG | - | chr4.4:3133883-3133902 | MS.gene05904:intron | 50.0% |
| !! | ACTTGTTGTTGCGCCTTTGC+CGG | - | chr4.4:3132688-3132707 | MS.gene05904:intron | 50.0% |
| !! | ATGGTGTTGCAAGGGACCAT+AGG | + | chr4.4:3137176-3137195 | None:intergenic | 50.0% |
| !! | ATGGTGTTGCATGGGACCAA+AGG | + | chr4.4:3137242-3137261 | None:intergenic | 50.0% |
| !! | GACCAAAGGCGTTGAAGTGA+TGG | + | chr4.4:3137294-3137313 | None:intergenic | 50.0% |
| !! | GACCATAGGTGCTGAAGTGA+TGG | + | chr4.4:3137162-3137181 | None:intergenic | 50.0% |
| !! | GTTGAAGTGACGGTGTTGCA+AGG | + | chr4.4:3137317-3137336 | None:intergenic | 50.0% |
| AAAGGGAGGCCAATGTCTCC+TGG | - | chr4.4:3136297-3136316 | MS.gene05904:intron | 55.0% | |
| ACTTTGGGTGCAGGAAGAGG+AGG | + | chr4.4:3132145-3132164 | None:intergenic | 55.0% | |
| ATGAGCCATCGACGCAGTTG+AGG | + | chr4.4:3136376-3136395 | None:intergenic | 55.0% | |
| ATTGAGAACCAGTAGGGGGG+GGG | + | chr4.4:3134531-3134550 | None:intergenic | 55.0% | |
| CATTGAGAACCAGTAGGGGG+GGG | + | chr4.4:3134532-3134551 | None:intergenic | 55.0% | |
| CCCAAAGTGGGGTCAGTCTT+AGG | - | chr4.4:3132157-3132176 | MS.gene05904:CDS | 55.0% | |
| CCTCTTCCTGCACCCAAAGT+GGG | - | chr4.4:3132145-3132164 | MS.gene05904:CDS | 55.0% | |
| CTCTTCCTGCACCCAAAGTG+GGG | - | chr4.4:3132146-3132165 | MS.gene05904:CDS | 55.0% | |
| GAAGGTCCAACACGAGGTAC+TGG | + | chr4.4:3134968-3134987 | None:intergenic | 55.0% | |
| GAGTTTGCGATGGCCCATTC+TGG | - | chr4.4:3134380-3134399 | MS.gene05904:CDS | 55.0% | |
| GCCTAAGACTGACCCCACTT+TGG | + | chr4.4:3132161-3132180 | None:intergenic | 55.0% | |
| GCGCCTTTGCCGGAACTTAT+TGG | - | chr4.4:3132698-3132717 | MS.gene05904:intron | 55.0% | |
| GCGTCGGGGATATATTGCGA+TGG | - | chr4.4:3132784-3132803 | MS.gene05904:intron | 55.0% | |
| TCCTCTTCCTGCACCCAAAG+TGG | - | chr4.4:3132144-3132163 | MS.gene05904:CDS | 55.0% | |
| TGAGCCATCGACGCAGTTGA+GGG | + | chr4.4:3136375-3136394 | None:intergenic | 55.0% | |
| TGGCTGTCCGACACTCATAG+TGG | - | chr4.4:3134400-3134419 | MS.gene05904:CDS | 55.0% | |
| ! | CAAAGCTCCTTCAGGTGCTG+TGG | + | chr4.4:3135133-3135152 | None:intergenic | 55.0% |
| ! | GCAGGAAGAGGAGGAAGTGT+CGG | + | chr4.4:3132136-3132155 | None:intergenic | 55.0% |
| !! | ACGGTGTTGCAAGGGACCAA+AGG | + | chr4.4:3137308-3137327 | None:intergenic | 55.0% |
| !! | GAGCGACAGGCTTTGTTCCA+TGG | - | chr4.4:3133808-3133827 | MS.gene05904:intron | 55.0% |
| !! | GAGTGTCGGACAGCCAGAAT+GGG | + | chr4.4:3134396-3134415 | None:intergenic | 55.0% |
| !! | GGAGACATTGGCCTCCCTTT+TGG | + | chr4.4:3136297-3136316 | None:intergenic | 55.0% |
| !! | TGAGTGTCGGACAGCCAGAA+TGG | + | chr4.4:3134397-3134416 | None:intergenic | 55.0% |
| ACTGACCCCACTTTGGGTGC+AGG | + | chr4.4:3132154-3132173 | None:intergenic | 60.0% | |
| ACTGAGGCAGCGCAACAGCA+AGG | - | chr4.4:3137092-3137111 | MS.gene05904:intron | 60.0% | |
| AGCCATCGACGCAGTTGAGG+GGG | + | chr4.4:3136373-3136392 | None:intergenic | 60.0% | |
| CCCACTTTGGGTGCAGGAAG+AGG | + | chr4.4:3132148-3132167 | None:intergenic | 60.0% | |
| CCTGTCCCAGTACCTCGTGT+TGG | - | chr4.4:3134959-3134978 | MS.gene05904:intron | 60.0% | |
| CTGTTGCGCTGCCTCAGTAC+TGG | + | chr4.4:3137090-3137109 | None:intergenic | 60.0% | |
| GAGCCATCGACGCAGTTGAG+GGG | + | chr4.4:3136374-3136393 | None:intergenic | 60.0% | |
| GCAGCGCAACAGCAAGGACT+GGG | - | chr4.4:3137098-3137117 | MS.gene05904:intron | 60.0% | |
| GGAACTCTGGCCGTCCATCA+GGG | - | chr4.4:3133945-3133964 | MS.gene05904:intron | 60.0% | |
| GGCAAGACGAGAAGCCGTTG+AGG | - | chr4.4:3132849-3132868 | MS.gene05904:intron | 60.0% | |
| TTGAGAACCAGTAGGGGGGG+GGG | + | chr4.4:3134530-3134549 | None:intergenic | 60.0% | |
| ! | TCCGGCAGAGGTGCAGTTAC+CGG | + | chr4.4:3132097-3132116 | None:intergenic | 60.0% |
| !! | CAACGCTTTTGGTGGCACGC+CGG | - | chr4.4:3132075-3132094 | MS.gene05904:CDS | 60.0% |
| !! | CCAACACGAGGTACTGGGAC+AGG | + | chr4.4:3134962-3134981 | None:intergenic | 60.0% |
| !! | GAAGTGTCGGCGGTGGTTGT+GGG | + | chr4.4:3132123-3132142 | None:intergenic | 60.0% |
| !! | GGAAGAGGAGGAAGTGTCGG+CGG | + | chr4.4:3132133-3132152 | None:intergenic | 60.0% |
| CGGAACTCTGGCCGTCCATC+AGG | - | chr4.4:3133944-3133963 | MS.gene05904:intron | 65.0% | |
| GCCGGTAACTGCACCTCTGC+CGG | - | chr4.4:3132093-3132112 | MS.gene05904:CDS | 65.0% | |
| GGCAGCGCAACAGCAAGGAC+TGG | - | chr4.4:3137097-3137116 | MS.gene05904:intron | 65.0% | |
| GGCGGTGGTTGTGGGTGTTC+CGG | + | chr4.4:3132115-3132134 | None:intergenic | 65.0% | |
| GGTTGTGGGTGTTCCGGCAG+AGG | + | chr4.4:3132109-3132128 | None:intergenic | 65.0% | |
| TGAGAACCAGTAGGGGGGGG+GGG | + | chr4.4:3134529-3134548 | None:intergenic | 65.0% | |
| TGCCCCCTCAACTGCGTCGA+TGG | - | chr4.4:3136368-3136387 | MS.gene05904:intron | 65.0% | |
| ! | GGTGCTGCAGGACCTCTGAC+AGG | + | chr4.4:3134923-3134942 | None:intergenic | 65.0% |
| !! | AGAGGAGGAAGTGTCGGCGG+TGG | + | chr4.4:3132130-3132149 | None:intergenic | 65.0% |
| !! | GGAAGTGTCGGCGGTGGTTG+TGG | + | chr4.4:3132124-3132143 | None:intergenic | 65.0% |
| AGAACCAGTAGGGGGGGGGG+GGG | + | chr4.4:3134527-3134546 | None:intergenic | 70.0% | |
| GAGAACCAGTAGGGGGGGGG+GGG | + | chr4.4:3134528-3134547 | None:intergenic | 70.0% | |
| GAACCAGTAGGGGGGGGGGG+GGG | + | chr4.4:3134526-3134545 | None:intergenic | 75.0% | |
| ! | CAGTAGGGGGGGGGGGGGGT+AGG | + | chr4.4:3134522-3134541 | None:intergenic | 80.0% |
| ! | CTACCCCCCCCCCCCCCTAC+TGG | - | chr4.4:3134520-3134539 | MS.gene05904:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 3131992 | 3137403 | 3131992 | ID=MS.gene05904 |
| chr4.4 | mRNA | 3131992 | 3137403 | 3131992 | ID=MS.gene05904.t1;Parent=MS.gene05904 |
| chr4.4 | exon | 3137228 | 3137403 | 3137228 | ID=MS.gene05904.t1.exon1;Parent=MS.gene05904.t1 |
| chr4.4 | CDS | 3137228 | 3137403 | 3137228 | ID=cds.MS.gene05904.t1;Parent=MS.gene05904.t1 |
| chr4.4 | exon | 3136728 | 3136835 | 3136728 | ID=MS.gene05904.t1.exon2;Parent=MS.gene05904.t1 |
| chr4.4 | CDS | 3136728 | 3136835 | 3136728 | ID=cds.MS.gene05904.t1;Parent=MS.gene05904.t1 |
| chr4.4 | exon | 3136450 | 3136627 | 3136450 | ID=MS.gene05904.t1.exon3;Parent=MS.gene05904.t1 |
| chr4.4 | CDS | 3136450 | 3136627 | 3136450 | ID=cds.MS.gene05904.t1;Parent=MS.gene05904.t1 |
| chr4.4 | exon | 3135399 | 3135746 | 3135399 | ID=MS.gene05904.t1.exon4;Parent=MS.gene05904.t1 |
| chr4.4 | CDS | 3135399 | 3135746 | 3135399 | ID=cds.MS.gene05904.t1;Parent=MS.gene05904.t1 |
| chr4.4 | exon | 3134378 | 3134481 | 3134378 | ID=MS.gene05904.t1.exon5;Parent=MS.gene05904.t1 |
| chr4.4 | CDS | 3134378 | 3134481 | 3134378 | ID=cds.MS.gene05904.t1;Parent=MS.gene05904.t1 |
| chr4.4 | exon | 3134196 | 3134290 | 3134196 | ID=MS.gene05904.t1.exon6;Parent=MS.gene05904.t1 |
| chr4.4 | CDS | 3134196 | 3134290 | 3134196 | ID=cds.MS.gene05904.t1;Parent=MS.gene05904.t1 |
| chr4.4 | exon | 3132870 | 3133289 | 3132870 | ID=MS.gene05904.t1.exon7;Parent=MS.gene05904.t1 |
| chr4.4 | CDS | 3132870 | 3133289 | 3132870 | ID=cds.MS.gene05904.t1;Parent=MS.gene05904.t1 |
| chr4.4 | exon | 3131992 | 3132383 | 3131992 | ID=MS.gene05904.t1.exon8;Parent=MS.gene05904.t1 |
| chr4.4 | CDS | 3131992 | 3132383 | 3131992 | ID=cds.MS.gene05904.t1;Parent=MS.gene05904.t1 |
| Gene Sequence |
| Protein sequence |
