AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069831

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069831.t1 MTR_7g055610 95.129 349 17 0 1 349 2 350 0.0 645
MS.gene069831.t1 MTR_7g057520 95.335 343 16 0 7 349 1 343 0.0 635
MS.gene069831.t1 MTR_7g013840 40.274 365 181 9 5 349 1 348 3.83e-70 229
MS.gene069831.t1 MTR_7g013840 40.274 365 181 9 5 349 1 348 3.86e-70 229
MS.gene069831.t1 MTR_4g109640 40.227 353 169 8 16 349 12 341 6.18e-67 218
MS.gene069831.t1 MTR_4g109640 40.227 353 169 8 16 349 12 341 7.89e-67 218
MS.gene069831.t1 MTR_4g109640 39.050 379 188 9 16 375 12 366 8.45e-66 218
MS.gene069831.t1 MTR_4g083150 37.027 370 187 8 7 349 1 351 2.26e-63 212
MS.gene069831.t1 MTR_7g098440 30.649 385 220 10 21 375 13 380 2.19e-38 144
MS.gene069831.t1 MTR_1g045800 29.363 361 214 11 14 349 7 351 1.80e-30 122
MS.gene069831.t1 MTR_3g074840 90.476 42 4 0 397 438 34 75 1.22e-18 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069831.t1 AT3G25150 46.133 362 150 9 13 349 8 349 4.15e-90 282
MS.gene069831.t1 AT3G25150 46.133 362 150 9 13 349 107 448 8.82e-90 284
MS.gene069831.t1 AT5G60980 36.842 380 197 6 7 371 1 352 1.46e-59 201
MS.gene069831.t1 AT5G60980 36.842 380 197 6 7 371 1 352 1.46e-59 201
MS.gene069831.t1 AT5G60980 38.268 358 178 6 7 349 1 330 5.66e-59 200
MS.gene069831.t1 AT5G60980 38.268 358 178 6 7 349 1 330 5.66e-59 200
MS.gene069831.t1 AT5G48650 37.322 351 186 9 18 345 13 352 2.76e-54 187
MS.gene069831.t1 AT1G13730 32.303 356 190 9 7 351 1 316 3.60e-42 154
MS.gene069831.t1 AT1G13730 32.303 356 190 9 7 351 1 316 3.60e-42 154
MS.gene069831.t1 AT2G03640 33.815 346 186 11 9 347 2 311 4.23e-41 151
MS.gene069831.t1 AT2G03640 32.319 427 225 17 9 424 2 375 2.63e-40 150
MS.gene069831.t1 AT1G69250 33.048 351 203 12 7 354 1 322 3.07e-40 148
MS.gene069831.t1 AT2G03640 34.006 347 183 12 9 347 2 310 4.53e-40 149
MS.gene069831.t1 AT2G03640 34.006 347 183 12 9 347 2 310 4.53e-40 149
MS.gene069831.t1 AT2G03640 34.006 347 183 12 9 347 2 310 4.53e-40 149
MS.gene069831.t1 AT1G69250 33.815 346 197 12 7 349 1 317 1.06e-38 145
MS.gene069831.t1 AT5G43960 29.275 386 238 12 16 376 6 381 1.77e-28 117
MS.gene069831.t1 AT3G07250 30.702 342 187 14 16 345 3 306 3.21e-27 115
MS.gene069831.t1 AT5G43960 29.412 289 173 9 112 376 41 322 2.28e-20 92.8
MS.gene069831.t1 AT3G55540 33.071 127 79 4 19 139 30 156 1.30e-13 72.0
MS.gene069831.t1 AT3G24463 35.922 103 62 4 19 117 9 111 2.24e-11 61.6

Find 114 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCATATAGGTCAACCTTTA+AGG 0.164906 2.1:-17909636 MS.gene069831:intron
ATACTAGAACCATTTGTTTC+TGG 0.167296 2.1:+17911327 None:intergenic
CCGGATATCACCTCCCTTAA+AGG 0.173779 2.1:+17909670 None:intergenic
TCCGTAATGACAGCTGCTTC+TGG 0.220668 2.1:-17911411 MS.gene069831:CDS
ACAAATGCACGACACCTTAA+AGG 0.235524 2.1:+17909622 None:intergenic
TCTTCGGCACTTCTTCAATT+TGG 0.257888 2.1:+17911705 None:intergenic
GATAATATGTTCAAGAAGTT+TGG 0.272836 2.1:-17911068 MS.gene069831:CDS
CACGGTGGAGTGTTCATAAT+TGG 0.280010 2.1:-17909730 MS.gene069831:intron
GGAGTCATTGTCTTGGTCAC+TGG 0.284606 2.1:-17912222 MS.gene069831:CDS
AACAATACCCTTGTTAATCT+TGG 0.314577 2.1:+17908979 None:intergenic
GAGTCATTGTCTTGGTCACT+GGG 0.328550 2.1:-17912221 MS.gene069831:CDS
TGGACACCGCCACTCTTGAT+AGG 0.341350 2.1:+17911044 None:intergenic
GTGGATGCACAAGAGTCTTT+TGG 0.375158 2.1:-17912249 MS.gene069831:CDS
GCTGCTTTCTGTGAATCATT+AGG 0.376741 2.1:+17911779 None:intergenic
TTCACAGAAGGTAGCTGAAT+TGG 0.401296 2.1:-17911732 MS.gene069831:CDS
TACCCTTGTTAATCTTGGTT+GGG 0.404379 2.1:+17908984 None:intergenic
CCGTAATGACAGCTGCTTCT+GGG 0.406551 2.1:-17911410 MS.gene069831:CDS
CTTGGAAAGCAATGCAGCTT+CGG 0.407039 2.1:+17908903 None:intergenic
TAAAACCTATGCACATGCTC+AGG 0.418125 2.1:+17912934 None:intergenic
AGGGCATGTGTAGCATTTCC+AGG 0.424842 2.1:+17911095 None:intergenic
CGGATATCACCTCCCTTAAA+GGG 0.429573 2.1:+17909671 None:intergenic
AGCATCATGTTACCATTCTC+AGG 0.433770 2.1:+17912042 None:intergenic
TTCCTTGCTCCTCAAGAGAA+AGG 0.437287 2.1:-17912150 MS.gene069831:CDS
TGACTGCTGAGGATGGTGAT+AGG 0.438498 2.1:-17911889 MS.gene069831:CDS
CCCAGAAGCAGCTGTCATTA+CGG 0.438517 2.1:+17911410 None:intergenic
CTTGTGGAATTCATTAAGAA+AGG 0.439556 2.1:-17908944 MS.gene069831:CDS
AGTGTTGGATCCTCCTGTGC+TGG 0.440145 2.1:-17911939 MS.gene069831:CDS
AGAGTGGCGGTGTCCAAGTT+AGG 0.440879 2.1:-17911037 MS.gene069831:CDS
CCGATGATACCATCTGGTTC+AGG 0.443109 2.1:+17912886 None:intergenic
AGAAGTCTACAATCCAGAAA+AGG 0.444292 2.1:-17911858 MS.gene069831:CDS
TTGGTCACTGGGTTTATGAT+AGG 0.445866 2.1:-17912210 MS.gene069831:CDS
GAAGTCTACAATCCAGAAAA+GGG 0.452472 2.1:-17911857 MS.gene069831:CDS
AAAGGGCCTAATGCTTAACT+TGG 0.454379 2.1:+17908885 None:intergenic
TCAGCAAGAACCTCAGGAAC+AGG 0.454683 2.1:+17911806 None:intergenic
TACCAAGATGTCAGTAAGCT+TGG 0.454912 2.1:-17912913 MS.gene069831:CDS
ATACCTTTGATGTCCTAACT+TGG 0.455895 2.1:+17911024 None:intergenic
AGTTCTTCGTAGATATTTGT+GGG 0.457699 2.1:+17909701 None:intergenic
ATGGAGGCATATGATTTCTT+CGG 0.458037 2.1:+17911689 None:intergenic
AAGTTCTTCGTAGATATTTG+TGG 0.458407 2.1:+17909700 None:intergenic
GGCTATTCAATTTATTTGAA+AGG 0.459524 2.1:-17911122 MS.gene069831:CDS
GCTATTCAATTTATTTGAAA+GGG 0.459913 2.1:-17911121 MS.gene069831:CDS
CCTTTAAGGGAGGTGATATC+CGG 0.463323 2.1:-17909670 MS.gene069831:CDS
TGCTTTCCAAGTTAAGCATT+AGG 0.464275 2.1:-17908891 None:intergenic
GGAATTTCAGCAAGAACCTC+AGG 0.465142 2.1:+17911800 None:intergenic
ATTTATTTGAAAGGGCTGCC+TGG 0.471179 2.1:-17911113 MS.gene069831:CDS
ATACCCTTGTTAATCTTGGT+TGG 0.474510 2.1:+17908983 None:intergenic
ACTCTTGTGCATCCACAGAT+AGG 0.475539 2.1:+17912256 None:intergenic
GGATCATTTGTGTCGCATAT+AGG 0.476402 2.1:-17909649 MS.gene069831:CDS
GACCAAGCTTACTGACATCT+TGG 0.477816 2.1:+17912911 None:intergenic
GGAGATCCAATGTCATGATC+AGG 0.484436 2.1:+17912072 None:intergenic
TGTTGATGAAAATGAAATCA+AGG 0.484974 2.1:-17912097 MS.gene069831:CDS
TGACAAGAAGATACTGTCAA+TGG 0.484996 2.1:-17912304 MS.gene069831:CDS
GAGATTTGGAGTCAAACATT+GGG 0.489067 2.1:-17910544 MS.gene069831:intron
ACAAAGTAGCCTTTCTCTTG+AGG 0.490719 2.1:+17912141 None:intergenic
AGAGATTTGGAGTCAAACAT+TGG 0.500748 2.1:-17910545 MS.gene069831:CDS
GCTACCTTCTGTGAATCATC+AGG 0.503178 2.1:+17911740 None:intergenic
TCTCCTGCCTCTCCTGAGAA+TGG 0.504733 2.1:-17912054 MS.gene069831:intron
TTAAGAAAGGAGACAAAGGT+TGG 0.506917 2.1:-17908931 MS.gene069831:CDS
TGTTGAAATCATTACCCTTG+TGG 0.507495 2.1:-17908960 MS.gene069831:CDS
GGAACTTGTGTCTCCAGCAC+AGG 0.507872 2.1:+17911926 None:intergenic
ATAGATATACATACAACATC+AGG 0.509761 2.1:+17913260 None:intergenic
GCAGTCACAGATATTTGCTC+TGG 0.513035 2.1:+17911905 None:intergenic
TTACCATTCTCAGGAGAGGC+AGG 0.514038 2.1:+17912051 None:intergenic
TTCAGAGAATCAAGTTCCTC+CGG 0.526348 2.1:-17913285 MS.gene069831:CDS
ACCATTTGTTTCTGGCACAC+TGG 0.527488 2.1:+17911335 None:intergenic
AATGATTCACAGAAAGCAGC+TGG 0.531023 2.1:-17911776 MS.gene069831:CDS
TATATGCGACACAAATGATC+CGG 0.531249 2.1:+17909651 None:intergenic
GACAAGAAGATACTGTCAAT+GGG 0.533669 2.1:-17912303 MS.gene069831:CDS
GCAAGTGTCTGTTGAAGAAG+AGG 0.533771 2.1:-17911834 MS.gene069831:CDS
TCCAGTGTGCCAGAAACAAA+TGG 0.535626 2.1:-17911336 MS.gene069831:CDS
GTAGCTTAAGGTAATGAAAG+AGG 0.550794 2.1:-17911448 MS.gene069831:intron
CTTTCTTAATGAATTCCACA+AGG 0.553388 2.1:+17908945 None:intergenic
TCTAGTATAAGTACTAATGA+AGG 0.557933 2.1:-17911312 MS.gene069831:CDS
AAGGAACCTGATCATGACAT+TGG 0.558690 2.1:-17912078 MS.gene069831:CDS
GACTGCTGAGGATGGTGATA+GGG 0.564877 2.1:-17911888 MS.gene069831:CDS
CATCCCAACCAAGATTAACA+AGG 0.566179 2.1:-17908987 MS.gene069831:CDS
AGTATAAGTACTAATGAAGG+TGG 0.568379 2.1:-17911309 MS.gene069831:CDS
TTTGTTTCTGGCACACTGGA+TGG 0.571504 2.1:+17911339 None:intergenic
CCTGAACCAGATGGTATCAT+CGG 0.573611 2.1:-17912886 MS.gene069831:CDS
AGCCTTTCTCTTGAGGAGCA+AGG 0.578397 2.1:+17912148 None:intergenic
GGACACCGCCACTCTTGATA+GGG 0.579408 2.1:+17911045 None:intergenic
TTCATTAAGAAAGGAGACAA+AGG 0.585836 2.1:-17908935 MS.gene069831:CDS
AAAACCTATGCACATGCTCA+GGG 0.586213 2.1:+17912935 None:intergenic
AGAACAGACACTTGCAATGG+AGG 0.590299 2.1:+17911673 None:intergenic
CACTGGGTTTATGATAGGAA+AGG 0.597377 2.1:-17912205 MS.gene069831:CDS
GTGATGCCGATGATACCATC+TGG 0.601385 2.1:+17912880 None:intergenic
ACTTGTGTCTCCAGCACAGG+AGG 0.604167 2.1:+17911929 None:intergenic
TCTTGAACATATTATCAACA+AGG 0.608367 2.1:+17911075 None:intergenic
GCAGCTGTCATTACGGAGGA+CGG 0.611765 2.1:+17911417 None:intergenic
ATACATACAACATCAGGTGC+CGG 0.615319 2.1:+17913266 None:intergenic
GCAAATATCTGTGACTGCTG+AGG 0.616027 2.1:-17911900 MS.gene069831:CDS
TTTCTTAATGAATTCCACAA+GGG 0.623376 2.1:+17908946 None:intergenic
CTTGAACATATTATCAACAA+GGG 0.626265 2.1:+17911076 None:intergenic
ATATCTGTGACTGCTGAGGA+TGG 0.626749 2.1:-17911896 MS.gene069831:CDS
GAGAGAGCTCACGGCCATTG+TGG 0.628746 2.1:+17912855 None:intergenic
TGTTCCTGATGATTCACAGA+AGG 0.634860 2.1:-17911744 MS.gene069831:CDS
AAGTCTACAATCCAGAAAAG+GGG 0.635113 2.1:-17911856 MS.gene069831:CDS
TAGTGCGGAGATCCTATCTG+TGG 0.636226 2.1:-17912268 MS.gene069831:CDS
AAAGCCCTGAGCATGTGCAT+AGG 0.637108 2.1:-17912939 MS.gene069831:CDS
GGAAACAATCAAGAAACTGA+AGG 0.637783 2.1:-17911288 MS.gene069831:intron
GTTGATTGAAACGATTGCAA+TGG 0.638473 2.1:-17913312 MS.gene069831:CDS
AGAGGAAGCTCCTGTTCCTG+AGG 0.641981 2.1:-17911816 MS.gene069831:CDS
TCTGGCACACTGGATGGTGA+AGG 0.641996 2.1:+17911345 None:intergenic
CATGTTACCATTCTCAGGAG+AGG 0.648742 2.1:+17912047 None:intergenic
GGGTTATAGTGAACTTAGTG+CGG 0.649351 2.1:-17912283 MS.gene069831:CDS
CTTGGTCGTCCTGAACCAGA+TGG 0.650811 2.1:-17912895 MS.gene069831:CDS
TGTCCAAGTTAGGACATCAA+AGG 0.651020 2.1:-17911027 MS.gene069831:intron
AAGTTTGGCCCTATCAAGAG+TGG 0.651104 2.1:-17911053 MS.gene069831:CDS
ATCCCAACCAAGATTAACAA+GGG 0.664581 2.1:-17908986 MS.gene069831:CDS
CATCGGCATCACAACCACAA+TGG 0.675733 2.1:-17912869 MS.gene069831:CDS
ATAGTAGTACTGTTCAACAA+AGG 0.683995 2.1:+17912972 None:intergenic
TTTGGCCCTATCAAGAGTGG+CGG 0.685024 2.1:-17911050 MS.gene069831:CDS
CATACAACATCAGGTGCCGG+AGG 0.709159 2.1:+17913269 None:intergenic
AGAAGCAGCTGTCATTACGG+AGG 0.717591 2.1:+17911413 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAACAAATAAATTGAAT+AGG - chr2.1:17912185-17912204 MS.gene069831:CDS 10.0%
!! TTTATTTAACATGTATTTAA+AGG + chr2.1:17912675-17912694 None:intergenic 10.0%
!!! TAGTTTTCAATTTTAAAAAA+AGG - chr2.1:17911989-17912008 MS.gene069831:intron 10.0%
!! AACTTAGATTCTAATAAATA+TGG - chr2.1:17909768-17909787 MS.gene069831:intron 15.0%
!! ACAATGGAAATAAATTTAAA+AGG + chr2.1:17909723-17909742 None:intergenic 15.0%
!!! CTCATTATTAATTTGTTTTT+AGG - chr2.1:17911567-17911586 MS.gene069831:intron 15.0%
!! AAAAATATTCTTACTTGGAA+TGG + chr2.1:17911528-17911547 None:intergenic 20.0%
!! AACTTGTATATTTGTTTGTT+TGG - chr2.1:17912700-17912719 MS.gene069831:intron 20.0%
!! AAGACAATGATTAATTTAGT+CGG - chr2.1:17912247-17912266 MS.gene069831:CDS 20.0%
!! ACAGAAAAAATATTCTTACT+TGG + chr2.1:17911533-17911552 None:intergenic 20.0%
!! ACTTGTATATTTGTTTGTTT+GGG - chr2.1:17912701-17912720 MS.gene069831:intron 20.0%
!! ATAACAAGTAACATTTACAA+TGG + chr2.1:17910604-17910623 None:intergenic 20.0%
!! ATTGAAATAAATTCGTGAAA+AGG + chr2.1:17911697-17911716 None:intergenic 20.0%
!! GCTATTCAATTTATTTGAAA+GGG - chr2.1:17911082-17911101 MS.gene069831:CDS 20.0%
!! TAGAATCTAAGTTAACAAAT+GGG + chr2.1:17909761-17909780 None:intergenic 20.0%
!! TATTTATTGATGTGTTCAAT+TGG - chr2.1:17911039-17911058 MS.gene069831:CDS 20.0%
!! TTAGAATCTAAGTTAACAAA+TGG + chr2.1:17909762-17909781 None:intergenic 20.0%
!!! AAGTTAATCTCTCAAATTTT+GGG - chr2.1:17913049-17913068 MS.gene069831:intron 20.0%
!!! CATTATCTGATTTTCAAATA+CGG + chr2.1:17912741-17912760 None:intergenic 20.0%
!!! TAAGTTAATCTCTCAAATTT+TGG - chr2.1:17913048-17913067 MS.gene069831:intron 20.0%
! AAGATATTGTACAAACCAAT+TGG + chr2.1:17909534-17909553 None:intergenic 25.0%
! AATATCACTATGATAAACAC+AGG + chr2.1:17911023-17911042 None:intergenic 25.0%
! ATAATGATAACAACTTACAG+TGG - chr2.1:17912755-17912774 MS.gene069831:intron 25.0%
! ATAGATATACATACAACATC+AGG + chr2.1:17908946-17908965 None:intergenic 25.0%
! ATATCACTATGATAAACACA+GGG + chr2.1:17911022-17911041 None:intergenic 25.0%
! CTTGAACATATTATCAACAA+GGG + chr2.1:17911130-17911149 None:intergenic 25.0%
! GATAATATGTTCAAGAAGTT+TGG - chr2.1:17911135-17911154 MS.gene069831:intron 25.0%
! GGCTATTCAATTTATTTGAA+AGG - chr2.1:17911081-17911100 MS.gene069831:CDS 25.0%
! TAACATTTACAATGGAAACT+CGG + chr2.1:17910596-17910615 None:intergenic 25.0%
! TAATGATAACAACTTACAGT+GGG - chr2.1:17912756-17912775 MS.gene069831:intron 25.0%
! TCAATATTCATATCTCCAAT+TGG - chr2.1:17909516-17909535 MS.gene069831:intron 25.0%
! TCCTCTAATAATTTCAAACT+AGG + chr2.1:17911824-17911843 None:intergenic 25.0%
! TCTAGTATAAGTACTAATGA+AGG - chr2.1:17910891-17910910 MS.gene069831:intron 25.0%
! TCTTGAACATATTATCAACA+AGG + chr2.1:17911131-17911150 None:intergenic 25.0%
! TGTTGAGATAAATAGAAGAA+AGG - chr2.1:17911439-17911458 MS.gene069831:CDS 25.0%
! TTATGTTTATTCTCCACTTT+AGG - chr2.1:17913186-17913205 MS.gene069831:intron 25.0%
! TTCTTCTATTTATCTCAACA+TGG + chr2.1:17911439-17911458 None:intergenic 25.0%
! TTGTACAAAATAGTGTTTAG+CGG - chr2.1:17909084-17909103 MS.gene069831:intron 25.0%
! TTTCTTAATGAATTCCACAA+GGG + chr2.1:17913260-17913279 None:intergenic 25.0%
!! GATTTTCAAATACGGAAAAA+GGG + chr2.1:17912733-17912752 None:intergenic 25.0%
!! TGATTTTCAAATACGGAAAA+AGG + chr2.1:17912734-17912753 None:intergenic 25.0%
!! TGTTGATGAAAATGAAATCA+AGG - chr2.1:17910106-17910125 MS.gene069831:intron 25.0%
!!! AAATGCAATTTTGAGAGATT+TGG - chr2.1:17911645-17911664 MS.gene069831:intron 25.0%
!!! ATTTTTAATGTGGTTGGTTT+AGG - chr2.1:17909199-17909218 MS.gene069831:intron 25.0%
!!! CAAACGTTTTTAGTCTAAAA+TGG - chr2.1:17912022-17912041 MS.gene069831:intron 25.0%
AAAATGCACACAAGAAACAA+GGG + chr2.1:17909481-17909500 None:intergenic 30.0%
AAAGAAAACGATAACAAACC+TGG + chr2.1:17913132-17913151 None:intergenic 30.0%
AAATGAAGAATACTGTCATG+AGG - chr2.1:17912102-17912121 MS.gene069831:CDS 30.0%
AACAAGCAACTTAAGTTAAC+AGG + chr2.1:17910228-17910247 None:intergenic 30.0%
AACAATACCCTTGTTAATCT+TGG + chr2.1:17913227-17913246 None:intergenic 30.0%
AAGAAATTACACCAATGCAT+AGG + chr2.1:17909615-17909634 None:intergenic 30.0%
AAGTTCTTCGTAGATATTTG+TGG + chr2.1:17912506-17912525 None:intergenic 30.0%
AATCGCTATTTGACAACATT+GGG - chr2.1:17909132-17909151 MS.gene069831:intron 30.0%
AGTATAAGTACTAATGAAGG+TGG - chr2.1:17910894-17910913 MS.gene069831:intron 30.0%
AGTTCTTCGTAGATATTTGT+GGG + chr2.1:17912505-17912524 None:intergenic 30.0%
ATACTAGAACCATTTGTTTC+TGG + chr2.1:17910879-17910898 None:intergenic 30.0%
ATAGTAGTACTGTTCAACAA+AGG + chr2.1:17909234-17909253 None:intergenic 30.0%
CATAGCCACCAATATATATT+CGG + chr2.1:17911885-17911904 None:intergenic 30.0%
CTAAATCCAATCAAGAGTTA+CGG + chr2.1:17911934-17911953 None:intergenic 30.0%
CTTGTGGAATTCATTAAGAA+AGG - chr2.1:17913259-17913278 MS.gene069831:intron 30.0%
CTTTCTTAATGAATTCCACA+AGG + chr2.1:17913261-17913280 None:intergenic 30.0%
GCATTTAGATGATCATACAA+TGG + chr2.1:17909739-17909758 None:intergenic 30.0%
TAAAATGCACACAAGAAACA+AGG + chr2.1:17909482-17909501 None:intergenic 30.0%
TAATCGCTATTTGACAACAT+TGG - chr2.1:17909131-17909150 MS.gene069831:intron 30.0%
TATGTGCACCGAATATATAT+TGG - chr2.1:17911874-17911893 MS.gene069831:CDS 30.0%
TATTCTTACTTGGAATGGAT+TGG + chr2.1:17911523-17911542 None:intergenic 30.0%
TATTCTTGACTCTATTACAC+TGG - chr2.1:17910623-17910642 MS.gene069831:intron 30.0%
TTCATTAAGAAAGGAGACAA+AGG - chr2.1:17913268-17913287 MS.gene069831:intron 30.0%
TTTCAAATAACGCCTATTTG+CGG + chr2.1:17909059-17909078 None:intergenic 30.0%
! ATTCTTACTTGGAATGGATT+GGG + chr2.1:17911522-17911541 None:intergenic 30.0%
! ATTTAGTCGGATACTCATTT+TGG - chr2.1:17912260-17912279 MS.gene069831:CDS 30.0%
! CTTTATAGCTGTCTATGTTT+TGG - chr2.1:17909430-17909449 MS.gene069831:intron 30.0%
! GCCTAGTTTGAAATTATTAG+AGG - chr2.1:17911820-17911839 MS.gene069831:CDS 30.0%
! TTTAGTCGGATACTCATTTT+GGG - chr2.1:17912261-17912280 MS.gene069831:CDS 30.0%
!! AGTTTGTTTAAGTTTTGCGA+TGG - chr2.1:17909018-17909037 MS.gene069831:intron 30.0%
!! ATTTTGGGTGATCTATTTTG+TGG - chr2.1:17912276-17912295 MS.gene069831:CDS 30.0%
!! CAGTTGACTGATTTTTAATG+TGG - chr2.1:17909189-17909208 MS.gene069831:intron 30.0%
!! TGACTGATTTTTAATGTGGT+TGG - chr2.1:17909193-17909212 MS.gene069831:intron 30.0%
!!! TAACCATGTTTTAATACCCT+TGG - chr2.1:17909568-17909587 MS.gene069831:intron 30.0%
!!! TTAAGGCGTGGTTTTATTAA+GGG - chr2.1:17910183-17910202 MS.gene069831:intron 30.0%
!!! TTGTTATTTTCCTCTGTAAC+TGG - chr2.1:17910722-17910741 MS.gene069831:intron 30.0%
AAATGCACACAAGAAACAAG+GGG + chr2.1:17909480-17909499 None:intergenic 35.0%
AAGTCTACAATCCAGAAAAG+GGG - chr2.1:17910347-17910366 MS.gene069831:intron 35.0%
AATAAGCCCCAACCAATTAT+GGG + chr2.1:17912348-17912367 None:intergenic 35.0%
AATTGAATAGGAGTTGCTGT+CGG - chr2.1:17912197-17912216 MS.gene069831:CDS 35.0%
ACCAATTATGAGCACTCAAA+AGG + chr2.1:17912375-17912394 None:intergenic 35.0%
AGAAGTCTACAATCCAGAAA+AGG - chr2.1:17910345-17910364 MS.gene069831:intron 35.0%
AGAATATGAGTGAGTAGTGA+TGG + chr2.1:17911392-17911411 None:intergenic 35.0%
AGTGAAACTACTAGGAAAAG+AGG + chr2.1:17911298-17911317 None:intergenic 35.0%
ATAACAAACCTGGAAGAAAG+AGG + chr2.1:17913122-17913141 None:intergenic 35.0%
ATACCCTTGTTAATCTTGGT+TGG + chr2.1:17913223-17913242 None:intergenic 35.0%
ATACCTTTGATGTCCTAACT+TGG + chr2.1:17911182-17911201 None:intergenic 35.0%
ATATCCAAAGCAATGTTCAG+AGG + chr2.1:17909650-17909669 None:intergenic 35.0%
ATCCCAACCAAGATTAACAA+GGG - chr2.1:17913217-17913236 MS.gene069831:intron 35.0%
ATGTGGTGTTCATAATTGGT+TGG - chr2.1:17912447-17912466 MS.gene069831:intron 35.0%
CTAGCATAGAAGTAGAGATA+AGG + chr2.1:17911972-17911991 None:intergenic 35.0%
GAAGTCTACAATCCAGAAAA+GGG - chr2.1:17910346-17910365 MS.gene069831:intron 35.0%
GAATGGTAACATGATGCTTA+AGG - chr2.1:17910166-17910185 MS.gene069831:intron 35.0%
GACAAGAAGATACTGTCAAT+GGG - chr2.1:17909900-17909919 MS.gene069831:intron 35.0%
GGAAACAATCAAGAAACTGA+AGG - chr2.1:17910915-17910934 MS.gene069831:intron 35.0%
GTAGCTTAAGGTAATGAAAG+AGG - chr2.1:17910755-17910774 MS.gene069831:intron 35.0%
TAACTCCCTTCCTAAAAGAA+TGG + chr2.1:17911342-17911361 None:intergenic 35.0%
TAAGAACCGTAACTCTTGAT+TGG - chr2.1:17911925-17911944 MS.gene069831:CDS 35.0%
TACCCTTGTTAATCTTGGTT+GGG + chr2.1:17913222-17913241 None:intergenic 35.0%
TATAGAACAGACACTTGCAA+TGG + chr2.1:17910536-17910555 None:intergenic 35.0%
TATATGCGACACAAATGATC+CGG + chr2.1:17912555-17912574 None:intergenic 35.0%
TCATACAATGTTGTGAATCG+CGG - chr2.1:17908980-17908999 MS.gene069831:CDS 35.0%
TGACAAGAAGATACTGTCAA+TGG - chr2.1:17909899-17909918 MS.gene069831:intron 35.0%
TGTTGAAATCATTACCCTTG+TGG - chr2.1:17913243-17913262 MS.gene069831:intron 35.0%
TTAAGAAAGGAGACAAAGGT+TGG - chr2.1:17913272-17913291 MS.gene069831:intron 35.0%
! AGAGATTTGGAGTCAAACAT+TGG - chr2.1:17911658-17911677 MS.gene069831:intron 35.0%
! ATATATATTGGTGGCTATGC+AGG - chr2.1:17911886-17911905 MS.gene069831:CDS 35.0%
! ATGGAGGCATATGATTTCTT+CGG + chr2.1:17910517-17910536 None:intergenic 35.0%
! GAGATTTGGAGTCAAACATT+GGG - chr2.1:17911659-17911678 MS.gene069831:intron 35.0%
! GCTGCTAGCTAATAACTTTT+TGG - chr2.1:17911245-17911264 MS.gene069831:intron 35.0%
! TATGGATTGAGTGTTAGAAG+TGG - chr2.1:17909786-17909805 MS.gene069831:intron 35.0%
! TTATTTTCCTCTGTAACTGG+TGG - chr2.1:17910725-17910744 MS.gene069831:intron 35.0%
!! AAAGGCATCAGCAAGTAATT+AGG + chr2.1:17909705-17909724 None:intergenic 35.0%
!! AAGCATAGTGCCATTCTTTT+AGG - chr2.1:17911329-17911348 MS.gene069831:CDS 35.0%
!! ATAGTGCCATTCTTTTAGGA+AGG - chr2.1:17911333-17911352 MS.gene069831:CDS 35.0%
!! GACATCAAAGGTATTTCACT+TGG - chr2.1:17911188-17911207 MS.gene069831:intron 35.0%
!! TAGTGCCATTCTTTTAGGAA+GGG - chr2.1:17911334-17911353 MS.gene069831:CDS 35.0%
!! TTAATGTGGTTGGTTTAGGT+TGG - chr2.1:17909203-17909222 MS.gene069831:intron 35.0%
!!! CTTAAGGCGTGGTTTTATTA+AGG - chr2.1:17910182-17910201 MS.gene069831:intron 35.0%
!!! TTTCTTTTGGTGCCCATAAT+TGG - chr2.1:17912408-17912427 MS.gene069831:intron 35.0%
AAAACCTATGCACATGCTCA+GGG + chr2.1:17909271-17909290 None:intergenic 40.0%
AAGGAACCTGATCATGACAT+TGG - chr2.1:17910125-17910144 MS.gene069831:intron 40.0%
AATGATTCACAGAAAGCAGC+TGG - chr2.1:17910427-17910446 MS.gene069831:intron 40.0%
ACAAAGTAGCCTTTCTCTTG+AGG + chr2.1:17910065-17910084 None:intergenic 40.0%
ACAAATGCACGACACCTTAA+AGG + chr2.1:17912584-17912603 None:intergenic 40.0%
ACACCAATGCATAGGCATAT+GGG + chr2.1:17909607-17909626 None:intergenic 40.0%
ACGAGAGATCGTAAAGTAAG+AGG - chr2.1:17911468-17911487 MS.gene069831:intron 40.0%
ACTTGTGAGAAATCTCACCA+AGG + chr2.1:17912812-17912831 None:intergenic 40.0%
AGAAAGAGCAAGAAAGGAAG+AGG + chr2.1:17910564-17910583 None:intergenic 40.0%
AGAATGGCACTATGCTTATG+AGG + chr2.1:17911326-17911345 None:intergenic 40.0%
AGCATCATGTTACCATTCTC+AGG + chr2.1:17910164-17910183 None:intergenic 40.0%
ATACATACAACATCAGGTGC+CGG + chr2.1:17908940-17908959 None:intergenic 40.0%
ATTTATTTGAAAGGGCTGCC+TGG - chr2.1:17911090-17911109 MS.gene069831:CDS 40.0%
CAAACCTCTGAACATTGCTT+TGG - chr2.1:17909643-17909662 MS.gene069831:CDS 40.0%
CAATAAGCCCCAACCAATTA+TGG + chr2.1:17912349-17912368 None:intergenic 40.0%
CAATCAAGAAACTGAAGGTC+TGG - chr2.1:17910920-17910939 MS.gene069831:intron 40.0%
CACCAAAGGTTCACATATCT+CGG + chr2.1:17912787-17912806 None:intergenic 40.0%
CACTGGGTTTATGATAGGAA+AGG - chr2.1:17909998-17910017 MS.gene069831:intron 40.0%
CATACAATGTTGTGAATCGC+GGG - chr2.1:17908981-17909000 MS.gene069831:CDS 40.0%
CATCAGCAAGTAATTAGGTG+GGG + chr2.1:17909700-17909719 None:intergenic 40.0%
CATCCCAACCAAGATTAACA+AGG - chr2.1:17913216-17913235 MS.gene069831:intron 40.0%
CCTATTTCATTTCACCAAGC+AGG - chr2.1:17909872-17909891 MS.gene069831:intron 40.0%
CGCATATAGGTCAACCTTTA+AGG - chr2.1:17912567-17912586 MS.gene069831:intron 40.0%
CTTCTTGTCAATTTCCTGCT+TGG + chr2.1:17909889-17909908 None:intergenic 40.0%
GAAAGAGCAAGAAAGGAAGA+GGG + chr2.1:17910563-17910582 None:intergenic 40.0%
GAGTCTAGAAAGAGCAAGAA+AGG + chr2.1:17910570-17910589 None:intergenic 40.0%
GCATCAGCAAGTAATTAGGT+GGG + chr2.1:17909701-17909720 None:intergenic 40.0%
GGATCATTTGTGTCGCATAT+AGG - chr2.1:17912554-17912573 MS.gene069831:intron 40.0%
GGGTATGTGGTGTTCATAAT+TGG - chr2.1:17912443-17912462 MS.gene069831:intron 40.0%
GGGTTATAGTGAACTTAGTG+CGG - chr2.1:17909920-17909939 MS.gene069831:intron 40.0%
GTGCACCGAATATATATTGG+TGG - chr2.1:17911877-17911896 MS.gene069831:CDS 40.0%
GTGTAATCAGTGTCTCTAGT+AGG - chr2.1:17912219-17912238 MS.gene069831:CDS 40.0%
TAAAACCTATGCACATGCTC+AGG + chr2.1:17909272-17909291 None:intergenic 40.0%
TAATCAGTGTCTCTAGTAGG+TGG - chr2.1:17912222-17912241 MS.gene069831:CDS 40.0%
TACACCAATGCATAGGCATA+TGG + chr2.1:17909608-17909627 None:intergenic 40.0%
TACCAAGATGTCAGTAAGCT+TGG - chr2.1:17909290-17909309 MS.gene069831:intron 40.0%
TCTTCGGCACTTCTTCAATT+TGG + chr2.1:17910501-17910520 None:intergenic 40.0%
TGAGTGCTCATAATTGGTTG+AGG - chr2.1:17912377-17912396 MS.gene069831:intron 40.0%
TGATAACAACTTACAGTGGG+AGG - chr2.1:17912759-17912778 MS.gene069831:intron 40.0%
TGTCCAAGTTAGGACATCAA+AGG - chr2.1:17911176-17911195 MS.gene069831:intron 40.0%
TGTTCCTGATGATTCACAGA+AGG - chr2.1:17910459-17910478 MS.gene069831:intron 40.0%
TTCACAGAAGGTAGCTGAAT+TGG - chr2.1:17910471-17910490 MS.gene069831:intron 40.0%
TTCAGAGAATCAAGTTCCTC+CGG - chr2.1:17908918-17908937 MS.gene069831:CDS 40.0%
TTCATAATTGGTTGGAGCCA+CGG - chr2.1:17912455-17912474 MS.gene069831:intron 40.0%
TTGGTCACTGGGTTTATGAT+AGG - chr2.1:17909993-17910012 MS.gene069831:intron 40.0%
! AGAACTTTTGTCGCCCTTTA+AGG - chr2.1:17912519-17912538 MS.gene069831:intron 40.0%
! CCTGCTTGGTGAAATGAAAT+AGG + chr2.1:17909875-17909894 None:intergenic 40.0%
! GAACTTTTGTCGCCCTTTAA+GGG - chr2.1:17912520-17912539 MS.gene069831:intron 40.0%
! GCTGCTTTCTGTGAATCATT+AGG + chr2.1:17910427-17910446 None:intergenic 40.0%
! GTCTAAAGTTATGACCAGCT+AGG - chr2.1:17912832-17912851 MS.gene069831:intron 40.0%
!! GAGCCAAGGGTATTAAAACA+TGG + chr2.1:17909574-17909593 None:intergenic 40.0%
!! GCCTTTTGAGTGCTCATAAT+TGG - chr2.1:17912371-17912390 MS.gene069831:intron 40.0%
!! TACTTGGAATGGATTGGGTT+GGG + chr2.1:17911517-17911536 None:intergenic 40.0%
!! TCTTTTAGGAAGGGAGTTAG+TGG - chr2.1:17911343-17911362 MS.gene069831:CDS 40.0%
!! TGAGGCTCGTTGTTTTCTTT+TGG - chr2.1:17912395-17912414 MS.gene069831:intron 40.0%
!! TTACTTGGAATGGATTGGGT+TGG + chr2.1:17911518-17911537 None:intergenic 40.0%
!! TTTGGTGCCCATAATTGGTT+GGG - chr2.1:17912413-17912432 MS.gene069831:intron 40.0%
!!! TTTTGGTGCCCATAATTGGT+TGG - chr2.1:17912412-17912431 MS.gene069831:intron 40.0%
AACAGATCCACCAGTTACAG+AGG + chr2.1:17910735-17910754 None:intergenic 45.0%
AAGTTTGGCCCTATCAAGAG+TGG - chr2.1:17911150-17911169 MS.gene069831:intron 45.0%
AATAGCCCTCAGCTGTCAAA+AGG + chr2.1:17911068-17911087 None:intergenic 45.0%
ACACCCATATGCCTATGCAT+TGG - chr2.1:17909601-17909620 MS.gene069831:intron 45.0%
ACTCTTGTGCATCCACAGAT+AGG + chr2.1:17909950-17909969 None:intergenic 45.0%
AGAACAGACACTTGCAATGG+AGG + chr2.1:17910533-17910552 None:intergenic 45.0%
AGGTGGGAAGTGAAACTACT+AGG + chr2.1:17911306-17911325 None:intergenic 45.0%
AGTGCTATAGTGCCGCAAAT+AGG - chr2.1:17909044-17909063 MS.gene069831:intron 45.0%
ATATCTGTGACTGCTGAGGA+TGG - chr2.1:17910307-17910326 MS.gene069831:intron 45.0%
ATCTCAGACCTCTTTCTTCC+AGG - chr2.1:17913111-17913130 MS.gene069831:intron 45.0%
ATGGCACTATGCTTATGAGG+TGG + chr2.1:17911323-17911342 None:intergenic 45.0%
ATGTGTCCTTGGGTAGTGAA+AGG - chr2.1:17912855-17912874 MS.gene069831:intron 45.0%
CAATTATGAACACTCCACCG+TGG + chr2.1:17912475-17912494 None:intergenic 45.0%
CATGTTACCATTCTCAGGAG+AGG + chr2.1:17910159-17910178 None:intergenic 45.0%
CCAACACTGAAAGAAGGTTG+AGG + chr2.1:17910252-17910271 None:intergenic 45.0%
CCTCAACCTTCTTTCAGTGT+TGG - chr2.1:17910249-17910268 MS.gene069831:intron 45.0%
CCTGAACCAGATGGTATCAT+CGG - chr2.1:17909317-17909336 MS.gene069831:intron 45.0%
CGGATATCACCTCCCTTAAA+GGG + chr2.1:17912535-17912554 None:intergenic 45.0%
CTCCGAGATATGTGAACCTT+TGG - chr2.1:17912782-17912801 MS.gene069831:intron 45.0%
CTTGGAAAGCAATGCAGCTT+CGG + chr2.1:17913303-17913322 None:intergenic 45.0%
GAATGTATGCATGCGACACT+TGG + chr2.1:17912311-17912330 None:intergenic 45.0%
GACCAAGCTTACTGACATCT+TGG + chr2.1:17909295-17909314 None:intergenic 45.0%
GAGGATCCAACACTGAAAGA+AGG + chr2.1:17910258-17910277 None:intergenic 45.0%
GAGTCATTGTCTTGGTCACT+GGG - chr2.1:17909982-17910001 MS.gene069831:intron 45.0%
GCAAATATCTGTGACTGCTG+AGG - chr2.1:17910303-17910322 MS.gene069831:intron 45.0%
GCAAGTGTCTGTTGAAGAAG+AGG - chr2.1:17910369-17910388 MS.gene069831:intron 45.0%
GCAGTCACAGATATTTGCTC+TGG + chr2.1:17910301-17910320 None:intergenic 45.0%
GCTACCTTCTGTGAATCATC+AGG + chr2.1:17910466-17910485 None:intergenic 45.0%
GGAATTTCAGCAAGAACCTC+AGG + chr2.1:17910406-17910425 None:intergenic 45.0%
GGAGATCCAATGTCATGATC+AGG + chr2.1:17910134-17910153 None:intergenic 45.0%
GGCATCAGCAAGTAATTAGG+TGG + chr2.1:17909702-17909721 None:intergenic 45.0%
GGTGCAGTTTCTCTCTAAGT+GGG + chr2.1:17911418-17911437 None:intergenic 45.0%
GGTGGATCTGTTGTAGCTTA+AGG - chr2.1:17910743-17910762 MS.gene069831:intron 45.0%
GTAACATGATGCTTAAGGCG+TGG - chr2.1:17910171-17910190 MS.gene069831:intron 45.0%
GTCAACACCCAAAACAACAG+CGG + chr2.1:17912612-17912631 None:intergenic 45.0%
GTTGTCCTCTCATACCTCAT+GGG - chr2.1:17909452-17909471 MS.gene069831:intron 45.0%
TATGAACACCACATACCCCA+CGG + chr2.1:17912441-17912460 None:intergenic 45.0%
TCCAGTGTGCCAGAAACAAA+TGG - chr2.1:17910867-17910886 MS.gene069831:intron 45.0%
TGCATACATTCATTGTCGCG+TGG - chr2.1:17912320-17912339 MS.gene069831:intron 45.0%
TGGAAGAAAGAGGTCTGAGA+TGG + chr2.1:17913112-17913131 None:intergenic 45.0%
TGGCACTATGCTTATGAGGT+GGG + chr2.1:17911322-17911341 None:intergenic 45.0%
TGGTGCAGTTTCTCTCTAAG+TGG + chr2.1:17911419-17911438 None:intergenic 45.0%
TTCCTTGCTCCTCAAGAGAA+AGG - chr2.1:17910053-17910072 MS.gene069831:intron 45.0%
TTTCAGCCTTTCACTACCCA+AGG + chr2.1:17912864-17912883 None:intergenic 45.0%
! ATGCACAAGAGTCTTTTGGC+GGG - chr2.1:17909958-17909977 MS.gene069831:intron 45.0%
! ATGTTGTGAATCGCGGGTTA+TGG - chr2.1:17908987-17909006 MS.gene069831:CDS 45.0%
! CACGGTGGAGTGTTCATAAT+TGG - chr2.1:17912473-17912492 MS.gene069831:intron 45.0%
! CCTTTAAGGGAGGTGATATC+CGG - chr2.1:17912533-17912552 MS.gene069831:intron 45.0%
! GATGCACAAGAGTCTTTTGG+CGG - chr2.1:17909957-17909976 MS.gene069831:intron 45.0%
! GGAAGAAAGAGGTCTGAGAT+GGG + chr2.1:17913111-17913130 None:intergenic 45.0%
! GTGGATGCACAAGAGTCTTT+TGG - chr2.1:17909954-17909973 MS.gene069831:intron 45.0%
!! ACCATTTGTTTCTGGCACAC+TGG + chr2.1:17910871-17910890 None:intergenic 45.0%
!! TTTGTTTCTGGCACACTGGA+TGG + chr2.1:17910867-17910886 None:intergenic 45.0%
!! CATATATATATATATATATA+TGG + chr2.1:17910967-17910948 None:intergenic 5.0%
!! TTAAAAAAAAAAAAAAAACA+GGG + chr2.1:17911219-17911238 None:intergenic 5.0%
!! TTTAAAAAAAAAAAAAAAAC+AGG + chr2.1:17911220-17911239 None:intergenic 5.0%
AAAGCCCTGAGCATGTGCAT+AGG - chr2.1:17909264-17909283 MS.gene069831:intron 50.0%
ACCAGCTAGGATGTGTCCTT+GGG - chr2.1:17912845-17912864 MS.gene069831:intron 50.0%
AGAAGCAGCTGTCATTACGG+AGG + chr2.1:17910793-17910812 None:intergenic 50.0%
AGAGAGAGAGAGAGAGCTCA+CGG + chr2.1:17909360-17909379 None:intergenic 50.0%
AGAGTTCCTCAAGGCAACAC+AGG - chr2.1:17913079-17913098 MS.gene069831:intron 50.0%
AGCCTTTCTCTTGAGGAGCA+AGG + chr2.1:17910058-17910077 None:intergenic 50.0%
AGGGCATGTGTAGCATTTCC+AGG + chr2.1:17911111-17911130 None:intergenic 50.0%
ATAATTGGTTGGAGCCACGG+TGG - chr2.1:17912458-17912477 MS.gene069831:intron 50.0%
ATAATTGGTTGGGACCCGTG+GGG - chr2.1:17912423-17912442 MS.gene069831:intron 50.0%
ATGAACACCACATACCCCAC+GGG + chr2.1:17912440-17912459 None:intergenic 50.0%
CACGGGTCCCAACCAATTAT+GGG + chr2.1:17912423-17912442 None:intergenic 50.0%
CATAATTGGTTGGGACCCGT+GGG - chr2.1:17912422-17912441 MS.gene069831:intron 50.0%
CATCGGCATCACAACCACAA+TGG - chr2.1:17909334-17909353 MS.gene069831:intron 50.0%
CCCAGAAGCAGCTGTCATTA+CGG + chr2.1:17910796-17910815 None:intergenic 50.0%
CCGGATATCACCTCCCTTAA+AGG + chr2.1:17912536-17912555 None:intergenic 50.0%
CCGTAATGACAGCTGCTTCT+GGG - chr2.1:17910793-17910812 MS.gene069831:intron 50.0%
CGTGGTGCCCATAATTGGTT+GGG - chr2.1:17912338-17912357 MS.gene069831:intron 50.0%
CTAGTGCTGTCAAACAGCCA+CGG + chr2.1:17911783-17911802 None:intergenic 50.0%
GACTGCTGAGGATGGTGATA+GGG - chr2.1:17910315-17910334 MS.gene069831:intron 50.0%
GAGTATAGCTCCTTGTACCG+TGG - chr2.1:17911763-17911782 MS.gene069831:CDS 50.0%
GAGTTCCTCAAGGCAACACA+GGG - chr2.1:17913080-17913099 MS.gene069831:intron 50.0%
GCAAGTAATTAGGTGGGGTC+TGG + chr2.1:17909695-17909714 None:intergenic 50.0%
GGAGTCATTGTCTTGGTCAC+TGG - chr2.1:17909981-17910000 MS.gene069831:intron 50.0%
GGGATGTTGAGCACCTAAAG+TGG + chr2.1:17913202-17913221 None:intergenic 50.0%
GGGTGTAGAGTAAGAGCCAA+GGG + chr2.1:17909587-17909606 None:intergenic 50.0%
GGTCGTTACAGAGTTCCTCA+AGG - chr2.1:17913070-17913089 MS.gene069831:intron 50.0%
GGTTGTCCTCTCATACCTCA+TGG - chr2.1:17909451-17909470 MS.gene069831:intron 50.0%
GTGATGCCGATGATACCATC+TGG + chr2.1:17909326-17909345 None:intergenic 50.0%
GTGGTGCCCATAATTGGTTG+GGG - chr2.1:17912339-17912358 MS.gene069831:intron 50.0%
TAGTGCGGAGATCCTATCTG+TGG - chr2.1:17909935-17909954 MS.gene069831:intron 50.0%
TCAGCAAGAACCTCAGGAAC+AGG + chr2.1:17910400-17910419 None:intergenic 50.0%
TCCGTAATGACAGCTGCTTC+TGG - chr2.1:17910792-17910811 MS.gene069831:intron 50.0%
TGACTGCTGAGGATGGTGAT+AGG - chr2.1:17910314-17910333 MS.gene069831:intron 50.0%
TGGGTGTAGAGTAAGAGCCA+AGG + chr2.1:17909588-17909607 None:intergenic 50.0%
TGTCAAACAGCCACGGTACA+AGG + chr2.1:17911776-17911795 None:intergenic 50.0%
TTACCATTCTCAGGAGAGGC+AGG + chr2.1:17910155-17910174 None:intergenic 50.0%
TTTGGCCCTATCAAGAGTGG+CGG - chr2.1:17911153-17911172 MS.gene069831:intron 50.0%
! ACAGACACTTGCCCCTTTTC+TGG + chr2.1:17910361-17910380 None:intergenic 50.0%
! CCGATGATACCATCTGGTTC+AGG + chr2.1:17909320-17909339 None:intergenic 50.0%
! GGTTGCCTTTTGACAGCTGA+GGG - chr2.1:17911060-17911079 MS.gene069831:CDS 50.0%
! TGCACAAGAGTCTTTTGGCG+GGG - chr2.1:17909959-17909978 MS.gene069831:intron 50.0%
! TGGTTGCCTTTTGACAGCTG+AGG - chr2.1:17911059-17911078 MS.gene069831:CDS 50.0%
!! AGAAACAAGGGGTACCCATG+AGG + chr2.1:17909469-17909488 None:intergenic 50.0%
!! CTTTTGTCGCCCTTTAAGGG+AGG - chr2.1:17912523-17912542 MS.gene069831:intron 50.0%
!! TGTCGAGTCCGCTGTTGTTT+TGG - chr2.1:17912601-17912620 MS.gene069831:intron 50.0%
!!! GTCGAGTCCGCTGTTGTTTT+GGG - chr2.1:17912602-17912621 MS.gene069831:intron 50.0%
ACCCAAGGACACATCCTAGC+TGG + chr2.1:17912849-17912868 None:intergenic 55.0%
ACTTGTGTCTCCAGCACAGG+AGG + chr2.1:17910277-17910296 None:intergenic 55.0%
AGAGGAAGCTCCTGTTCCTG+AGG - chr2.1:17910387-17910406 MS.gene069831:intron 55.0%
AGAGTGGCGGTGTCCAAGTT+AGG - chr2.1:17911166-17911185 MS.gene069831:intron 55.0%
ATCTCACCAAGGCGCACCAA+AGG + chr2.1:17912801-17912820 None:intergenic 55.0%
CCACGGGTCCCAACCAATTA+TGG + chr2.1:17912424-17912443 None:intergenic 55.0%
CCATAATTGGTTGGGACCCG+TGG - chr2.1:17912421-17912440 MS.gene069831:intron 55.0%
CTTGGTCGTCCTGAACCAGA+TGG - chr2.1:17909308-17909327 MS.gene069831:intron 55.0%
GACCAGCTAGGATGTGTCCT+TGG - chr2.1:17912844-17912863 MS.gene069831:intron 55.0%
GCAGCTGTCATTACGGAGGA+CGG + chr2.1:17910789-17910808 None:intergenic 55.0%
GCGTGGTGCCCATAATTGGT+TGG - chr2.1:17912337-17912356 MS.gene069831:intron 55.0%
GGAACTTGTGTCTCCAGCAC+AGG + chr2.1:17910280-17910299 None:intergenic 55.0%
GGACACCGCCACTCTTGATA+GGG + chr2.1:17911161-17911180 None:intergenic 55.0%
GGGTACCCATGAGGTATGAG+AGG + chr2.1:17909460-17909479 None:intergenic 55.0%
TCAAGCCCTGTGTTGCCTTG+AGG + chr2.1:17913088-17913107 None:intergenic 55.0%
TCTCCTGCCTCTCCTGAGAA+TGG - chr2.1:17910149-17910168 MS.gene069831:intron 55.0%
TCTGGCACACTGGATGGTGA+AGG + chr2.1:17910861-17910880 None:intergenic 55.0%
TGGACACCGCCACTCTTGAT+AGG + chr2.1:17911162-17911181 None:intergenic 55.0%
TGTCGCGTGGTGCCCATAAT+TGG - chr2.1:17912333-17912352 MS.gene069831:intron 55.0%
! AGTGTTGGATCCTCCTGTGC+TGG - chr2.1:17910264-17910283 MS.gene069831:intron 55.0%
! GCACAAGAGTCTTTTGGCGG+GGG - chr2.1:17909960-17909979 MS.gene069831:intron 55.0%
! TGTGAACCTTTGGTGCGCCT+TGG - chr2.1:17912792-17912811 MS.gene069831:intron 55.0%
!! CATACAACATCAGGTGCCGG+AGG + chr2.1:17908937-17908956 None:intergenic 55.0%
GAGAGAGCTCACGGCCATTG+TGG + chr2.1:17909351-17909370 None:intergenic 60.0%
TGGCGGGGGAGTCATTGTCT+TGG - chr2.1:17909974-17909993 MS.gene069831:intron 60.0%
GTTGGGACCCGTGGGGTATG+TGG - chr2.1:17912430-17912449 MS.gene069831:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 17908892 17913333 17908892 ID=MS.gene069831
chr2.1 mRNA 17908892 17913333 17908892 ID=MS.gene069831.t1;Parent=MS.gene069831
chr2.1 exon 17913274 17913333 17913274 ID=MS.gene069831.t1.exon1;Parent=MS.gene069831.t1
chr2.1 CDS 17913274 17913333 17913274 ID=cds.MS.gene069831.t1;Parent=MS.gene069831.t1
chr2.1 exon 17912867 17913004 17912867 ID=MS.gene069831.t1.exon2;Parent=MS.gene069831.t1
chr2.1 CDS 17912867 17913004 17912867 ID=cds.MS.gene069831.t1;Parent=MS.gene069831.t1
chr2.1 exon 17912055 17912331 17912055 ID=MS.gene069831.t1.exon3;Parent=MS.gene069831.t1
chr2.1 CDS 17912055 17912331 17912055 ID=cds.MS.gene069831.t1;Parent=MS.gene069831.t1
chr2.1 exon 17911688 17911959 17911688 ID=MS.gene069831.t1.exon4;Parent=MS.gene069831.t1
chr2.1 CDS 17911688 17911959 17911688 ID=cds.MS.gene069831.t1;Parent=MS.gene069831.t1
chr2.1 exon 17911289 17911466 17911289 ID=MS.gene069831.t1.exon5;Parent=MS.gene069831.t1
chr2.1 CDS 17911289 17911466 17911289 ID=cds.MS.gene069831.t1;Parent=MS.gene069831.t1
chr2.1 exon 17911028 17911149 17911028 ID=MS.gene069831.t1.exon6;Parent=MS.gene069831.t1
chr2.1 CDS 17911028 17911149 17911028 ID=cds.MS.gene069831.t1;Parent=MS.gene069831.t1
chr2.1 exon 17910545 17910591 17910545 ID=MS.gene069831.t1.exon7;Parent=MS.gene069831.t1
chr2.1 CDS 17910545 17910591 17910545 ID=cds.MS.gene069831.t1;Parent=MS.gene069831.t1
chr2.1 exon 17909637 17909742 17909637 ID=MS.gene069831.t1.exon8;Parent=MS.gene069831.t1
chr2.1 CDS 17909637 17909742 17909637 ID=cds.MS.gene069831.t1;Parent=MS.gene069831.t1
chr2.1 exon 17908892 17909017 17908892 ID=MS.gene069831.t1.exon9;Parent=MS.gene069831.t1
chr2.1 CDS 17908892 17909017 17908892 ID=cds.MS.gene069831.t1;Parent=MS.gene069831.t1
Gene Sequence

>MS.gene069831

TTGATTGAAACGATTGCAATGGCAACTTCAGAGAATCAAGTTCCTCCGGCACCTGATGTTGTATGTATATCTATGTTCTTATTGTTTTTCATACAATGTTGTGAATCGCGGGTTATGGAAAATAGCAGTTTGTTTAAGTTTTGCGATGGTGCAGTGCTATAGTGCCGCAAATAGGCGTTATTTGAAAAAACTTTGTACAAAATAGTGTTTAGCGGAACAATAGTGCTATAGCGACGCTATAATCGCTATTTGACAACATTGGGATGATACATGATTTGATTTCTGTTAATGATAAAACAGTTGACTGATTTTTAATGTGGTTGGTTTAGGTTGGTCATGCCTTTGTTGAACAGTACTACTATATGTTGCATGAAAGCCCTGAGCATGTGCATAGGTTTTACCAAGATGTCAGTAAGCTTGGTCGTCCTGAACCAGATGGTATCATCGGCATCACAACCACAATGGCCGTGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTCTATCTCTGTTGCACTTTATAGCTGTCTATGTTTTGGTTGTCCTCTCATACCTCATGGGTACCCCTTGTTTCTTGTGTGCATTTTAATATATACATGTATTCAATATTCATATCTCCAATTGGTTTGTACAATATCTTGTATGACATTGATGTAACCATGTTTTAATACCCTTGGCTCTTACTCTACACCCATATGCCTATGCATTGGTGTAATTTCTTGTTTATTTCAAACCTCTGAACATTGCTTTGGATATGTATTGAAAAGATGCTGTAACTCCAGACCCCACCTAATTACTTGCTGATGCCTTTTAAATTTATTTCCATTGTATGATCATCTAAATGCCCATTTGTTAACTTAGATTCTAATAAATATGGATTGAGTGTTAGAAGTGGTTGAACTTGAAAACAATGAATTTAATCTTAATATATCTCTCTAAATTTTATATCTTAATGTATCCTATTTCATTTCACCAAGCAGGAAATTGACAAGAAGATACTGTCAATGGGTTATAGTGAACTTAGTGCGGAGATCCTATCTGTGGATGCACAAGAGTCTTTTGGCGGGGGAGTCATTGTCTTGGTCACTGGGTTTATGATAGGAAAGGATAACATTAAGCAGAAATTTACTCAATGTTTCTTCCTTGCTCCTCAAGAGAAAGGCTACTTTGTTTTGAATGATATTTTCAGATATGTTGATGAAAATGAAATCAAGGAACCTGATCATGACATTGGATCTCCTGCCTCTCCTGAGAATGGTAACATGATGCTTAAGGCGTGGTTTTATTAAGGGTTTTTGTTTCATACATTTGCCTGTTAACTTAAGTTGCTTGTTTCCTCAACCTTCTTTCAGTGTTGGATCCTCCTGTGCTGGAGACACAAGTTCCAGAGCAAATATCTGTGACTGCTGAGGATGGTGATAGGGAAGAACTAGAAGTCTACAATCCAGAAAAGGGGCAAGTGTCTGTTGAAGAAGAGGAAGCTCCTGTTCCTGAGGTTCTTGCTGAAATTCCTAATGATTCACAGAAAGCAGCTGGTTTTGATCATGTTCCTGATGATTCACAGAAGGTAGCTGAATTGGCATACCAAATTGAAGAAGTGCCGAAGAAATCATATGCCTCCATTGCAAGTGTCTGTTCTATAAATTCCCTCTTCCTTTCTTGCTCTTTCTAGACTCTTACCGAGTTTCCATTGTAAATGTTACTTGTTATATTCTTGACTCTATTACACTGGTGAAAATGCTGAAAATTAAACAGAATGATACTTTGATTCATTTTATCTAGAAGAGTAATAATTTCTAGAAGAATACTTGTTATTTTCCTCTGTAACTGGTGGATCTGTTGTAGCTTAAGGTAATGAAAGAGGCTGCTGCTCCGTCCTCCGTAATGACAGCTGCTTCTGGGAGAACTTCTAATAAGATTCAAGAACAGCAGAGTGCTGCTGCACCTTCACCATCCAGTGTGCCAGAAACAAATGGTTCTAGTATAAGTACTAATGAAGGTGGAAACAATCAAGAAACTGAAGGTCTGGTGAACCATATATATATATATATATATGTATATGTATATGTACATGTATGAGACTATTACTTGAATAGTTCAAATTTCCCTGTGTTTATCATAGTGATATTTATTGATGTGTTCAATTGGTTGCCTTTTGACAGCTGAGGGCTATTCAATTTATTTGAAAGGGCTGCCTGGAAATGCTACACATGCCCTTGTTGATAATATGTTCAAGAAGTTTGGCCCTATCAAGAGTGGCGGTGTCCAAGTTAGGACATCAAAGGTATTTCACTTGGCGATTCCCTGTTTTTTTTTTTTTTTTAAATGTTTGCTGCTAGCTAATAACTTTTTGGCAACGTGTATTTAGAAAAACAATGTAACCTCTTTTCCTAGTAGTTTCACTTCCCACCTCATAAGCATAGTGCCATTCTTTTAGGAAGGGAGTTAGTGGATAAATATCTGAATCACTATTAACCATCACTACTCACTCATATTCTACTCCCACTTAGAGAGAAACTGCACCATGTTGAGATAAATAGAAGAAAGGCTTAGAACGAGAGATCGTAAAGTAAGAGGAAAATATCGAAGAAAATAAACGTCCCAACCCAATCCATTCCAAGTAAGAATATTTTTTCTGTCTTACATTCTTTATCTCATTATTAATTTGTTTTTAGGAATCAATTTCTGTTTTGAAAATTAAAGAATGATAATATGTAGAGTTAGAAATGTTAAATGCAATTTTGAGAGATTTGGAGTCAAACATTGGGTTGAAGTAGAGACCTTTTCACGAATTTATTTCAATTGAAATAGTATATCTTAATTTTCTATTCAATGTTTAGCATATGTTTGAGTATAGCTCCTTGTACCGTGGCTGTTTGACAGCACTAGTTCTTAATTAGTTCATAGCCTAGTTTGAAATTATTAGAGGATTGAAAGCTTGCTGTTTGTTAAAATTAAATTATGTGCACCGAATATATATTGGTGGCTATGCAGGATATAGATCGTTGCTTTAAGAACCGTAACTCTTGATTGGATTTAGAATTTGATAACAACACCTTATCTCTACTTCTATGCTAGTTTTCAATTTTAAAAAAAGGTTCTGACTTACAAACGTTTTTAGTCTAAAATGGTATTGAATTTTGAATAAAGTGCTACTAATATATATATGTGTTCATTTTCTAGTTAAGAAATGAAGAATACTGTCATGAGGTAACTATGATTTTCTTGAGTAATTAAGTAATTTAGTTACAAAAGAAAAAGAGTCTTAGTTTAATAACAAATAAATTGAATAGGAGTTGCTGTCGGTGTAATCAGTGTCTCTAGTAGGTGGTTAAGACAATGATTAATTTAGTCGGATACTCATTTTGGGTGATCTATTTTGTGGAGTTAATAACCAAGTGTCGCATGCATACATTCATTGTCGCGTGGTGCCCATAATTGGTTGGGGCTTATTGTTGCCTTTTGAGTGCTCATAATTGGTTGAGGCTCGTTGTTTTCTTTTGGTGCCCATAATTGGTTGGGACCCGTGGGGTATGTGGTGTTCATAATTGGTTGGAGCCACGGTGGAGTGTTCATAATTGGTTGAAGCCCACAAATATCTACGAAGAACTTTTGTCGCCCTTTAAGGGAGGTGATATCCGGATCATTTGTGTCGCATATAGGTCAACCTTTAAGGTGTCGTGCATTTGTCGAGTCCGCTGTTGTTTTGGGTGTTGACATTTTGTGTACTTTATATTAATATTTGTACTATTTGCATACCTTTAAATACATGTTAAATAAATGTATAACTTGTATATTTGTTTGTTTGGGAGTTGACCCTTTTTCCGTATTTGAAAATCAGATAATGATAACAACTTACAGTGGGAGGCTCCGAGATATGTGAACCTTTGGTGCGCCTTGGTGAGATTTCTCACAAGTGTCTAAAGTTATGACCAGCTAGGATGTGTCCTTGGGTAGTGAAAGGCTGAAAGCCTTGTTCTTAGGAATTTTATATTTTGATGTAAAACAACTCTGATTTACTATTCTGAAAATTCAAGAGAAACTTATTTATTCATTTATTTTGAAGTTAATGAGTTTCAGTTACTTTTATTATTTAAAAAAAAAATATGTTCGTCTTTTTCACTAAGAATTTCATAAGTTAATCTCTCAAATTTTGGGTCGTTACAGAGTTCCTCAAGGCAACACAGGGCTTGACCCATCTCAGACCTCTTTCTTCCAGGTTTGTTATCGTTTTCTTTTAAACATCGAGATTTACTGTTGTGAATGTCAAACTTATGTTTATTCTCCACTTTAGGTGCTCAACATCCCAACCAAGATTAACAAGGGTATTGTTGAAATCATTACCCTTGTGGAATTCATTAAGAAAGGAGACAAAGGTTGGATCTTCCGAAGCTGCATTGCTTTCCAAGTTAAGCATTAG
Protein sequence

>MS.gene069831.t1

LIETIAMATSENQVPPAPDVVGHAFVEQYYYMLHESPEHVHRFYQDVSKLGRPEPDGIIGITTTMAEIDKKILSMGYSELSAEILSVDAQESFGGGVIVLVTGFMIGKDNIKQKFTQCFFLAPQEKGYFVLNDIFRYVDENEIKEPDHDIGSPASPENVLDPPVLETQVPEQISVTAEDGDREELEVYNPEKGQVSVEEEEAPVPEVLAEIPNDSQKAAGFDHVPDDSQKVAELAYQIEEVPKKSYASILKVMKEAAAPSSVMTAASGRTSNKIQEQQSAAAPSPSSVPETNGSSISTNEGGNNQETEAEGYSIYLKGLPGNATHALVDNMFKKFGPIKSGGVQVRTSKLEMLNAILRDLESNIGVHNWLKPTNIYEELLSPFKGGDIRIICVAYRSTFKVLNIPTKINKGIVEIITLVEFIKKGDKGWIFRSCIAFQVKH