Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070112.t1 | XP_003612642.1 | 96.5 | 311 | 11 | 0 | 2 | 312 | 1 | 311 | 2.30E-169 | 604.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070112.t1 | P52581 | 83.6 | 311 | 50 | 1 | 2 | 311 | 1 | 311 | 4.5e-153 | 542.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070112.t1 | B7FI60 | 96.5 | 311 | 11 | 0 | 2 | 312 | 1 | 311 | 1.7e-169 | 604.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene070112 | 0.803371 | 3.60E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene070112 | 0.821311 | 4.32E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene070112 | 0.809717 | 1.65E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene070112 | 0.80336 | 3.62E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070112.t1 | MTR_5g027290 | 96.463 | 311 | 11 | 0 | 2 | 312 | 1 | 311 | 0.0 | 623 |
| MS.gene070112.t1 | MTR_5g027240 | 94.212 | 311 | 18 | 0 | 2 | 312 | 1 | 311 | 0.0 | 613 |
| MS.gene070112.t1 | MTR_8g071130 | 75.884 | 311 | 74 | 1 | 2 | 311 | 1 | 311 | 1.52e-180 | 501 |
| MS.gene070112.t1 | MTR_5g020740 | 48.232 | 311 | 153 | 3 | 3 | 311 | 4 | 308 | 2.24e-95 | 285 |
| MS.gene070112.t1 | MTR_3g111980 | 47.756 | 312 | 153 | 4 | 1 | 308 | 1 | 306 | 3.34e-95 | 284 |
| MS.gene070112.t1 | MTR_3g111990 | 46.774 | 310 | 157 | 3 | 1 | 308 | 1 | 304 | 1.34e-93 | 280 |
| MS.gene070112.t1 | MTR_3g116840 | 47.573 | 309 | 154 | 4 | 5 | 311 | 9 | 311 | 6.52e-91 | 273 |
| MS.gene070112.t1 | MTR_4g070370 | 42.903 | 310 | 169 | 3 | 2 | 309 | 5 | 308 | 7.70e-82 | 251 |
| MS.gene070112.t1 | MTR_5g020760 | 40.248 | 323 | 175 | 4 | 1 | 311 | 1 | 317 | 1.03e-77 | 240 |
| MS.gene070112.t1 | MTR_5g020800 | 40.248 | 323 | 175 | 4 | 1 | 311 | 1 | 317 | 1.30e-77 | 239 |
| MS.gene070112.t1 | MTR_4g070360 | 41.290 | 310 | 174 | 3 | 2 | 308 | 1 | 305 | 1.71e-75 | 234 |
| MS.gene070112.t1 | MTR_5g020760 | 43.911 | 271 | 135 | 3 | 1 | 260 | 1 | 265 | 1.84e-74 | 230 |
| MS.gene070112.t1 | MTR_3g008100 | 41.290 | 310 | 164 | 7 | 4 | 308 | 5 | 301 | 3.30e-74 | 231 |
| MS.gene070112.t1 | MTR_4g070340 | 39.088 | 307 | 179 | 3 | 5 | 309 | 7 | 307 | 4.06e-73 | 228 |
| MS.gene070112.t1 | MTR_3g008100 | 40.645 | 310 | 159 | 7 | 4 | 308 | 5 | 294 | 3.27e-71 | 223 |
| MS.gene070112.t1 | MTR_3g007970 | 41.424 | 309 | 165 | 7 | 4 | 308 | 5 | 301 | 7.79e-70 | 219 |
| MS.gene070112.t1 | MTR_3g008140 | 40.000 | 310 | 169 | 8 | 3 | 308 | 4 | 300 | 3.12e-69 | 218 |
| MS.gene070112.t1 | MTR_4g070340 | 38.436 | 307 | 176 | 4 | 5 | 309 | 7 | 302 | 3.38e-69 | 218 |
| MS.gene070112.t1 | MTR_4g070340 | 39.200 | 250 | 144 | 3 | 62 | 309 | 15 | 258 | 1.95e-56 | 184 |
| MS.gene070112.t1 | MTR_1g093720 | 32.381 | 315 | 200 | 6 | 2 | 311 | 11 | 317 | 3.00e-55 | 183 |
| MS.gene070112.t1 | MTR_3g008100 | 42.211 | 199 | 98 | 6 | 4 | 198 | 5 | 190 | 3.56e-42 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070112.t1 | AT1G32100 | 68.608 | 309 | 97 | 0 | 3 | 311 | 8 | 316 | 4.13e-168 | 469 |
| MS.gene070112.t1 | AT4G13660 | 67.638 | 309 | 100 | 0 | 3 | 311 | 8 | 316 | 1.79e-162 | 455 |
| MS.gene070112.t1 | AT4G13660 | 67.638 | 309 | 100 | 0 | 3 | 311 | 8 | 316 | 1.79e-162 | 455 |
| MS.gene070112.t1 | AT1G75290 | 46.178 | 314 | 159 | 4 | 3 | 312 | 4 | 311 | 5.78e-91 | 274 |
| MS.gene070112.t1 | AT1G75290 | 46.178 | 314 | 159 | 4 | 3 | 312 | 31 | 338 | 1.45e-90 | 274 |
| MS.gene070112.t1 | AT1G75280 | 46.178 | 314 | 158 | 5 | 3 | 312 | 4 | 310 | 3.25e-89 | 269 |
| MS.gene070112.t1 | AT1G75300 | 45.015 | 331 | 147 | 7 | 3 | 311 | 4 | 321 | 2.53e-85 | 259 |
| MS.gene070112.t1 | AT4G39230 | 44.268 | 314 | 165 | 4 | 1 | 311 | 1 | 307 | 1.63e-84 | 257 |
| MS.gene070112.t1 | AT1G19540 | 44.051 | 311 | 166 | 4 | 5 | 311 | 3 | 309 | 2.31e-79 | 244 |
| MS.gene070112.t1 | AT1G19540 | 45.736 | 258 | 134 | 3 | 5 | 260 | 3 | 256 | 7.01e-70 | 218 |
| MS.gene070112.t1 | AT4G34540 | 38.019 | 313 | 171 | 5 | 3 | 308 | 6 | 302 | 3.33e-65 | 207 |
Find 76 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTTCCTACCTTCAGAATT+TGG | 0.100954 | 5.4:-18011120 | MS.gene070112:CDS |
| TGGGATGGACCCGGCTCTTA+TGG | 0.206133 | 5.4:-18011100 | MS.gene070112:CDS |
| GACGTTCTCTGCATCCTTGA+TGG | 0.243342 | 5.4:+18014386 | None:intergenic |
| GTTTGTGGCAGTTGTTTATA+TGG | 0.279757 | 5.4:-18010770 | MS.gene070112:intron |
| TCATCAAATGTGACTCTTCC+TGG | 0.296978 | 5.4:+18011063 | None:intergenic |
| AGTCACATTTGATGATAAAA+TGG | 0.301575 | 5.4:-18011055 | MS.gene070112:CDS |
| AAGAAAGTCTTGTTCGGATA+TGG | 0.342755 | 5.4:+18010591 | None:intergenic |
| AAAGAGAGCTAGTTGAGAAA+TGG | 0.344521 | 5.4:-18010648 | MS.gene070112:CDS |
| GTTTCCTACCTTCAGAATTT+GGG | 0.347946 | 5.4:-18011119 | MS.gene070112:CDS |
| GTACTTCAACGTCCAGATAT+AGG | 0.348370 | 5.4:-18014597 | MS.gene070112:CDS |
| TTGATGATAAAATGGCTATA+AGG | 0.354465 | 5.4:-18011047 | MS.gene070112:CDS |
| GGGATGGACCCGGCTCTTAT+GGG | 0.355066 | 5.4:-18011099 | MS.gene070112:CDS |
| TACTTCAACGTCCAGATATA+GGG | 0.362547 | 5.4:-18014596 | MS.gene070112:CDS |
| CGGGACAAGGTTGTTCTCTA+TGG | 0.363088 | 5.4:-18010919 | MS.gene070112:CDS |
| AAGAGAGCTAGTTGAGAAAT+GGG | 0.369973 | 5.4:-18010647 | MS.gene070112:CDS |
| TCAGTATCAAGCCCTATATC+TGG | 0.384832 | 5.4:+18014585 | None:intergenic |
| TGAACAAGACAATATATATA+AGG | 0.385377 | 5.4:-18010693 | MS.gene070112:CDS |
| TGTTTCGCGGGCTACTTTGC+CGG | 0.387206 | 5.4:-18010976 | MS.gene070112:CDS |
| AATGCAGGTTTGGACCTTGC+AGG | 0.388018 | 5.4:-18010470 | MS.gene070112:intron |
| GAGAAATGGGAGAAACTTAC+TGG | 0.391209 | 5.4:-18010634 | MS.gene070112:CDS |
| GTTGTTATTTGCACCATGTC+TGG | 0.392486 | 5.4:-18014459 | MS.gene070112:CDS |
| TGCCGGTAACCTCTCTCAAA+TGG | 0.408456 | 5.4:-18010959 | MS.gene070112:CDS |
| CTTCTTTCATTCAAGAAACT+AGG | 0.431002 | 5.4:-18014549 | MS.gene070112:CDS |
| AGAAATGCCCCACTGCTACT+TGG | 0.458358 | 5.4:+18010447 | None:intergenic |
| ATTGTCTTGTTCAACGTTCG+AGG | 0.459458 | 5.4:+18010703 | None:intergenic |
| TCCCATTTGAGAGAGGTTAC+CGG | 0.471634 | 5.4:+18010957 | None:intergenic |
| ATGCGTGTGTATTGCACCTC+TGG | 0.472227 | 5.4:+18010353 | None:intergenic |
| CATCTCCGCCAACTGTTTCG+CGG | 0.474425 | 5.4:-18010989 | MS.gene070112:CDS |
| GCCGGTAACCTCTCTCAAAT+GGG | 0.483634 | 5.4:-18010958 | MS.gene070112:CDS |
| CAAACTTATTGAAGCCATCA+AGG | 0.492205 | 5.4:-18014400 | MS.gene070112:CDS |
| GGCTATAAGGAAAGCAATTG+AGG | 0.493105 | 5.4:-18011034 | MS.gene070112:CDS |
| ATCTCCGCCAACTGTTTCGC+GGG | 0.497080 | 5.4:-18010988 | MS.gene070112:CDS |
| CCACTGCTACTTGGCCTGCA+AGG | 0.498308 | 5.4:+18010456 | None:intergenic |
| AAGAGCAAGGTTCTAGTTGT+GGG | 0.501694 | 5.4:-18014684 | MS.gene070112:CDS |
| GGAAGAAAGAAAGTCTTGTT+CGG | 0.504559 | 5.4:+18010585 | None:intergenic |
| GACTTTCTTTCTTCCATGAA+AGG | 0.513933 | 5.4:-18010577 | MS.gene070112:intron |
| AAAGTAGCCCGCGAAACAGT+TGG | 0.525770 | 5.4:+18010981 | None:intergenic |
| ACTCTTTCCTCCACGGGACA+AGG | 0.528622 | 5.4:-18010932 | MS.gene070112:CDS |
| AGTGCATGTCCCATAAGAGC+CGG | 0.536626 | 5.4:+18011090 | None:intergenic |
| CCTTGCAGGCCAAGTAGCAG+TGG | 0.542585 | 5.4:-18010456 | MS.gene070112:CDS |
| AAAGAGCAAGGTTCTAGTTG+TGG | 0.546360 | 5.4:-18014685 | MS.gene070112:CDS |
| GGGAACACTCTTTCCTCCAC+GGG | 0.550398 | 5.4:-18010938 | MS.gene070112:CDS |
| GAAACTAGGTGCTCATCTTG+TGG | 0.554098 | 5.4:-18014535 | MS.gene070112:CDS |
| GATGTAAGTGAAAGGGATGT+TGG | 0.555898 | 5.4:+18011008 | None:intergenic |
| TTCAGAATTTGGGATGGACC+CGG | 0.558745 | 5.4:-18011109 | MS.gene070112:CDS |
| CTTGCAGGCCAAGTAGCAGT+GGG | 0.566660 | 5.4:-18010455 | MS.gene070112:CDS |
| TTGGCGGAGATGTAAGTGAA+AGG | 0.566709 | 5.4:+18011000 | None:intergenic |
| ATGGGACATGCACTTGAACC+AGG | 0.574655 | 5.4:-18011081 | MS.gene070112:CDS |
| TGGCGGAGATGTAAGTGAAA+GGG | 0.576732 | 5.4:+18011001 | None:intergenic |
| CCTACCTTCAGAATTTGGGA+TGG | 0.579461 | 5.4:-18011115 | MS.gene070112:CDS |
| GTGCATGTCCCATAAGAGCC+GGG | 0.580776 | 5.4:+18011091 | None:intergenic |
| AACGATGATGGAAAAGAGCA+AGG | 0.585621 | 5.4:-18014697 | None:intergenic |
| TGGGAACACTCTTTCCTCCA+CGG | 0.593133 | 5.4:-18010939 | MS.gene070112:CDS |
| CAACTAGCTCTCTTTGAGTG+AGG | 0.596234 | 5.4:+18010656 | None:intergenic |
| GAGCAAGGTTCTAGTTGTGG+GGG | 0.596468 | 5.4:-18014682 | MS.gene070112:CDS |
| GGGGTACTGGGTATATTGGT+AGG | 0.599217 | 5.4:-18014662 | MS.gene070112:CDS |
| CTAGGTGCTCATCTTGTGGA+AGG | 0.605859 | 5.4:-18014531 | MS.gene070112:CDS |
| CCATCCCAAATTCTGAAGGT+AGG | 0.607236 | 5.4:+18011115 | None:intergenic |
| TATGGCGACGGTAATGTCAA+AGG | 0.611140 | 5.4:-18010901 | MS.gene070112:intron |
| TCGAAAATGAACTCCAGACA+TGG | 0.615339 | 5.4:+18014446 | None:intergenic |
| AGAGTGTTCCCATTTGAGAG+AGG | 0.622439 | 5.4:+18010950 | None:intergenic |
| AGAGGTGCAATACACACGCA+TGG | 0.626180 | 5.4:-18010351 | MS.gene070112:CDS |
| TATTGGTAGGAGAATAGTGA+AGG | 0.627838 | 5.4:-18014649 | MS.gene070112:CDS |
| AAGGTTGTTCTCTATGGCGA+CGG | 0.632761 | 5.4:-18010913 | MS.gene070112:CDS |
| TAGAGAACAACCTTGTCCCG+TGG | 0.639980 | 5.4:+18010922 | None:intergenic |
| GGGTCCATCCCAAATTCTGA+AGG | 0.640240 | 5.4:+18011111 | None:intergenic |
| GTGAAGGCAAGTTTAGAACA+AGG | 0.641128 | 5.4:-18014633 | MS.gene070112:CDS |
| AGAGCAAGGTTCTAGTTGTG+GGG | 0.642111 | 5.4:-18014683 | MS.gene070112:CDS |
| AGCATCAAAGCTTTATCCAG+AGG | 0.647566 | 5.4:-18010369 | MS.gene070112:CDS |
| GGTAGATGCTGTGAAACTAG+TGG | 0.656690 | 5.4:-18014484 | MS.gene070112:CDS |
| AGAACAACCTTGTCCCGTGG+AGG | 0.670350 | 5.4:+18010925 | None:intergenic |
| GTAGCCCGCGAAACAGTTGG+CGG | 0.675791 | 5.4:+18010984 | None:intergenic |
| CAAGGATGCAGAGAACGTCA+AGG | 0.679850 | 5.4:-18014382 | MS.gene070112:intron |
| AGCAAGGTTCTAGTTGTGGG+GGG | 0.685169 | 5.4:-18014681 | MS.gene070112:CDS |
| ATCTGGACGTTGAAGTACGT+AGG | 0.716805 | 5.4:+18014602 | None:intergenic |
| TTGCAGGCCAAGTAGCAGTG+GGG | 0.743312 | 5.4:-18010454 | MS.gene070112:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATATATATATATTTTT+AGG | - | chr5.4:18013736-18013755 | MS.gene070112:intron | 0.0% |
| !! | TATTGTTCATAAATTATAAA+GGG | - | chr5.4:18012677-18012696 | MS.gene070112:intron | 10.0% |
| !!! | AAAAATAAAATCATGATTTT+GGG | - | chr5.4:18012180-18012199 | MS.gene070112:intron | 10.0% |
| !!! | ATAATAAAAAATGTCATTTT+TGG | + | chr5.4:18012838-18012857 | None:intergenic | 10.0% |
| !!! | TAAAAATAAAATCATGATTT+TGG | - | chr5.4:18012179-18012198 | MS.gene070112:intron | 10.0% |
| !!! | TAATTTTATTAATGTAAAGA+TGG | + | chr5.4:18011063-18011082 | None:intergenic | 10.0% |
| !!! | TATATATATATATTTTTAGG+CGG | - | chr5.4:18013739-18013758 | MS.gene070112:intron | 10.0% |
| !! | AAAATAATAAATGACAAACT+AGG | - | chr5.4:18011328-18011347 | MS.gene070112:intron | 15.0% |
| !! | CTATTGTTCATAAATTATAA+AGG | - | chr5.4:18012676-18012695 | MS.gene070112:intron | 15.0% |
| !! | GATTTCAGATAAAAATAATA+TGG | - | chr5.4:18012708-18012727 | MS.gene070112:intron | 15.0% |
| !! | TAAATTATAAAGGGTAAAAA+TGG | - | chr5.4:18012686-18012705 | MS.gene070112:intron | 15.0% |
| !!! | AAATGTTAACTAATTTTTCT+AGG | + | chr5.4:18014153-18014172 | None:intergenic | 15.0% |
| !!! | AATGTTAACTAATTTTTCTA+GGG | + | chr5.4:18014152-18014171 | None:intergenic | 15.0% |
| !!! | ATATATATATATTTTTAGGC+GGG | - | chr5.4:18013740-18013759 | MS.gene070112:intron | 15.0% |
| !!! | ATTTTAAAATGAAATGTTTG+TGG | - | chr5.4:18013594-18013613 | MS.gene070112:intron | 15.0% |
| !!! | GCAAAATCATTTTTTTTTTT+AGG | + | chr5.4:18010702-18010721 | None:intergenic | 15.0% |
| !!! | TCACTTTTTCAAATTATTTT+TGG | + | chr5.4:18013661-18013680 | None:intergenic | 15.0% |
| !!! | TCATAAAAACTTACTTATTT+TGG | - | chr5.4:18010822-18010841 | MS.gene070112:intron | 15.0% |
| !!! | TTGACAATATAACTTTTTAT+AGG | + | chr5.4:18012561-18012580 | None:intergenic | 15.0% |
| !! | AATAACACAATTTACACAAA+AGG | - | chr5.4:18011472-18011491 | MS.gene070112:intron | 20.0% |
| !! | CTAAAAAGTTGTTTAATTGT+AGG | - | chr5.4:18013218-18013237 | MS.gene070112:intron | 20.0% |
| !! | GGAAAAAATTAAAGTTGTAT+TGG | - | chr5.4:18012403-18012422 | MS.gene070112:intron | 20.0% |
| !! | TGAACAAGACAATATATATA+AGG | - | chr5.4:18014325-18014344 | MS.gene070112:intron | 20.0% |
| !! | TGCAGATAACTTATAATTTA+TGG | - | chr5.4:18011376-18011395 | MS.gene070112:intron | 20.0% |
| !! | TTATAGCTATCTCTATTTAT+GGG | + | chr5.4:18011696-18011715 | None:intergenic | 20.0% |
| !! | TTTACACAATAAGATATATG+AGG | - | chr5.4:18014218-18014237 | MS.gene070112:intron | 20.0% |
| !!! | AAAAATTACACATAAGTTGA+AGG | - | chr5.4:18011657-18011676 | MS.gene070112:intron | 20.0% |
| !!! | AGCAGAGATTTAAAATTAAA+CGG | + | chr5.4:18012148-18012167 | None:intergenic | 20.0% |
| !!! | AGTATGTGATTTTTTTTGTT+TGG | + | chr5.4:18010887-18010906 | None:intergenic | 20.0% |
| !!! | ATTTATAATTGACTCTTGAT+TGG | - | chr5.4:18014520-18014539 | MS.gene070112:CDS | 20.0% |
| !!! | TCTATCATATTTTCTTTGAA+GGG | - | chr5.4:18014591-18014610 | MS.gene070112:CDS | 20.0% |
| !!! | TTCTATCATATTTTCTTTGA+AGG | - | chr5.4:18014590-18014609 | MS.gene070112:CDS | 20.0% |
| !!! | TTTTTCTAATCATCAAAGTT+TGG | - | chr5.4:18010513-18010532 | MS.gene070112:intron | 20.0% |
| ! | ACTCTTGCTTCATAAATTTA+TGG | + | chr5.4:18013280-18013299 | None:intergenic | 25.0% |
| ! | CTTATAGCTATCTCTATTTA+TGG | + | chr5.4:18011697-18011716 | None:intergenic | 25.0% |
| ! | TCAAATGAATGTAAATTGTG+TGG | + | chr5.4:18012009-18012028 | None:intergenic | 25.0% |
| !! | AATAAAATCATGATTTTGGG+TGG | - | chr5.4:18012183-18012202 | MS.gene070112:intron | 25.0% |
| !! | AGTCACATTTGATGATAAAA+TGG | - | chr5.4:18013963-18013982 | MS.gene070112:intron | 25.0% |
| !! | GCAGAGATTTAAAATTAAAC+GGG | + | chr5.4:18012147-18012166 | None:intergenic | 25.0% |
| !! | TAGACATACCATACTTTTAA+GGG | + | chr5.4:18013341-18013360 | None:intergenic | 25.0% |
| !! | TGTAAATATTTTCGACTTCT+AGG | + | chr5.4:18011200-18011219 | None:intergenic | 25.0% |
| !! | TTAGACATACCATACTTTTA+AGG | + | chr5.4:18013342-18013361 | None:intergenic | 25.0% |
| !! | TTGATGATAAAATGGCTATA+AGG | - | chr5.4:18013971-18013990 | MS.gene070112:intron | 25.0% |
| !! | TTTGACAAATTTTGAACTGA+AGG | - | chr5.4:18014616-18014635 | MS.gene070112:CDS | 25.0% |
| !!! | CATTTTTTTTTTTAGGAGAG+TGG | + | chr5.4:18010695-18010714 | None:intergenic | 25.0% |
| !!! | CTTTGATTTTGACAAAGTTT+TGG | + | chr5.4:18011914-18011933 | None:intergenic | 25.0% |
| !!! | GTCGTTTTCTTATAAAGTAA+GGG | + | chr5.4:18012324-18012343 | None:intergenic | 25.0% |
| !!! | TAGTAAAAGTGTTCAAGATA+TGG | + | chr5.4:18011794-18011813 | None:intergenic | 25.0% |
| !!! | TCTTTCTTATTTTGTCACAT+AGG | + | chr5.4:18011022-18011041 | None:intergenic | 25.0% |
| !!! | TGAAAAAGTGAAGTATTTTG+TGG | - | chr5.4:18013670-18013689 | MS.gene070112:intron | 25.0% |
| !!! | TGAATTGATTTTATCTCACA+TGG | - | chr5.4:18013822-18013841 | MS.gene070112:intron | 25.0% |
| !!! | TGTCGTTTTCTTATAAAGTA+AGG | + | chr5.4:18012325-18012344 | None:intergenic | 25.0% |
| !!! | TTACTTCTAGCTTTTTTTGA+AGG | + | chr5.4:18012888-18012907 | None:intergenic | 25.0% |
| !!! | TTCTTATGAAGTGTTTTAGA+TGG | - | chr5.4:18013107-18013126 | MS.gene070112:intron | 25.0% |
| AAAGCTAGAAGTAAGCTTAT+TGG | - | chr5.4:18012894-18012913 | MS.gene070112:intron | 30.0% | |
| AAATTGTGTGAGAGAAAAGT+TGG | - | chr5.4:18012363-18012382 | MS.gene070112:intron | 30.0% | |
| AATTTGGATATGTCAGAGAA+GGG | - | chr5.4:18013492-18013511 | MS.gene070112:intron | 30.0% | |
| ACATACTCTACTAGAAGAAA+TGG | - | chr5.4:18010900-18010919 | MS.gene070112:intron | 30.0% | |
| ACTCATAAATTGAGGTGTAT+CGG | + | chr5.4:18013304-18013323 | None:intergenic | 30.0% | |
| AGTTGTGTGGATATTTGTTT+AGG | - | chr5.4:18013178-18013197 | MS.gene070112:intron | 30.0% | |
| ATATGAGGTATACATGTTTG+TGG | - | chr5.4:18014233-18014252 | MS.gene070112:intron | 30.0% | |
| CATTGTCACATGTTTGAATT+GGG | + | chr5.4:18013058-18013077 | None:intergenic | 30.0% | |
| CTATGAATACTGAAATTAGC+AGG | - | chr5.4:18013022-18013041 | MS.gene070112:intron | 30.0% | |
| CTTCTTTCATTCAAGAAACT+AGG | - | chr5.4:18010469-18010488 | MS.gene070112:intron | 30.0% | |
| GATGCTTAAGTAATGTCTTT+GGG | - | chr5.4:18010844-18010863 | MS.gene070112:intron | 30.0% | |
| GCTAATATATGTTGTGCTTT+AGG | - | chr5.4:18011827-18011846 | MS.gene070112:intron | 30.0% | |
| TACAATGAATGCGAACAATT+TGG | - | chr5.4:18013476-18013495 | MS.gene070112:intron | 30.0% | |
| TAGAAGTTCCCTTAAAAGTA+TGG | - | chr5.4:18013330-18013349 | MS.gene070112:intron | 30.0% | |
| ! | AAGATGTGTTTTACCTTTCA+TGG | + | chr5.4:18014457-18014476 | None:intergenic | 30.0% |
| ! | AATATATGTTGTGCTTTAGG+AGG | - | chr5.4:18011830-18011849 | MS.gene070112:intron | 30.0% |
| ! | ACAAATTTTGAACTGAAGGA+TGG | - | chr5.4:18014620-18014639 | MS.gene070112:CDS | 30.0% |
| ! | ACAAGACACAAATCAAGTTT+TGG | + | chr5.4:18011751-18011770 | None:intergenic | 30.0% |
| ! | TATTTTGTCACATAGGCTTA+CGG | + | chr5.4:18011015-18011034 | None:intergenic | 30.0% |
| !! | AAAACTTGATTTGTGTCTTG+TGG | - | chr5.4:18011750-18011769 | MS.gene070112:intron | 30.0% |
| !! | AAGTGAAGTATTTTGTGGAT+AGG | - | chr5.4:18013675-18013694 | MS.gene070112:intron | 30.0% |
| !! | AAGTGACACTCATTTTGAAA+CGG | - | chr5.4:18012469-18012488 | MS.gene070112:intron | 30.0% |
| !! | ATATATGTTGTGCTTTAGGA+GGG | - | chr5.4:18011831-18011850 | MS.gene070112:intron | 30.0% |
| !! | TACTTTTAAGGGAACTTCTA+CGG | + | chr5.4:18013330-18013349 | None:intergenic | 30.0% |
| !!! | CGACTTGAATCACTTTTTTA+GGG | - | chr5.4:18013784-18013803 | MS.gene070112:intron | 30.0% |
| !!! | GATTTTGACAAAGTTTTGGA+TGG | + | chr5.4:18011910-18011929 | None:intergenic | 30.0% |
| !!! | TCGACTTGAATCACTTTTTT+AGG | - | chr5.4:18013783-18013802 | MS.gene070112:intron | 30.0% |
| AAAGAGAGCTAGTTGAGAAA+TGG | - | chr5.4:18014370-18014389 | MS.gene070112:intron | 35.0% | |
| AAGAGAGCTAGTTGAGAAAT+GGG | - | chr5.4:18014371-18014390 | MS.gene070112:intron | 35.0% | |
| AATACTGTGTGAAATAGCGT+TGG | - | chr5.4:18012757-18012776 | MS.gene070112:intron | 35.0% | |
| AGATTTAACCATTGCCCTAA+GGG | + | chr5.4:18010734-18010753 | None:intergenic | 35.0% | |
| ATACTGTGTGAAATAGCGTT+GGG | - | chr5.4:18012758-18012777 | MS.gene070112:intron | 35.0% | |
| ATCATGGGAACTTTGCTTAA+AGG | - | chr5.4:18012964-18012983 | MS.gene070112:intron | 35.0% | |
| ATTGCACACAGATTAAGGAA+TGG | - | chr5.4:18012259-18012278 | MS.gene070112:intron | 35.0% | |
| CAAACTTATTGAAGCCATCA+AGG | - | chr5.4:18010618-18010637 | MS.gene070112:CDS | 35.0% | |
| CAATTTGGATATGTCAGAGA+AGG | - | chr5.4:18013491-18013510 | MS.gene070112:intron | 35.0% | |
| CATTCATTGTAGCAGTACAT+CGG | + | chr5.4:18013467-18013486 | None:intergenic | 35.0% | |
| GACTTTCTTTCTTCCATGAA+AGG | - | chr5.4:18014441-18014460 | MS.gene070112:CDS | 35.0% | |
| GCATTGTCACATGTTTGAAT+TGG | + | chr5.4:18013059-18013078 | None:intergenic | 35.0% | |
| GGATGCTTAAGTAATGTCTT+TGG | - | chr5.4:18010843-18010862 | MS.gene070112:intron | 35.0% | |
| GTTTCCTACCTTCAGAATTT+GGG | - | chr5.4:18013899-18013918 | MS.gene070112:intron | 35.0% | |
| GTTTGTGGCAGTTGTTTATA+TGG | - | chr5.4:18014248-18014267 | MS.gene070112:intron | 35.0% | |
| TACGGAACACTCATAAATTG+AGG | + | chr5.4:18013312-18013331 | None:intergenic | 35.0% | |
| TACTTCAACGTCCAGATATA+GGG | - | chr5.4:18010422-18010441 | MS.gene070112:CDS | 35.0% | |
| TAGATTTAACCATTGCCCTA+AGG | + | chr5.4:18010735-18010754 | None:intergenic | 35.0% | |
| TATTGGTAGGAGAATAGTGA+AGG | - | chr5.4:18010369-18010388 | MS.gene070112:CDS | 35.0% | |
| TGAAGTCACAAAAACTTACG+AGG | - | chr5.4:18011980-18011999 | MS.gene070112:intron | 35.0% | |
| TTAAGCAAAGTTCCCATGAT+TGG | + | chr5.4:18012964-18012983 | None:intergenic | 35.0% | |
| TTAGTTGTCCCTACATGAAA+TGG | - | chr5.4:18011287-18011306 | MS.gene070112:intron | 35.0% | |
| TTCAAGTGAAAGAAGTTGTG+TGG | - | chr5.4:18013165-18013184 | MS.gene070112:intron | 35.0% | |
| TTCCTTAATCTGTGTGCAAT+TGG | + | chr5.4:18012259-18012278 | None:intergenic | 35.0% | |
| TTTCATGTAGGGACAACTAA+TGG | + | chr5.4:18011287-18011306 | None:intergenic | 35.0% | |
| ! | CGTAAGTTTTTGTGACTTCA+GGG | + | chr5.4:18011980-18011999 | None:intergenic | 35.0% |
| ! | TAATTGACTCTTGATTGGTG+TGG | - | chr5.4:18014525-18014544 | MS.gene070112:CDS | 35.0% |
| ! | TCGTAAGTTTTTGTGACTTC+AGG | + | chr5.4:18011981-18012000 | None:intergenic | 35.0% |
| ! | TTGGTACTGTCATTTCATCA+CGG | + | chr5.4:18012819-18012838 | None:intergenic | 35.0% |
| !! | AAGAAAGTCTTGTTCGGATA+TGG | + | chr5.4:18014430-18014449 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+TGG | + | chr5.4:18012233-18012252 | None:intergenic | 35.0% |
| !! | AAGTAATGTCTTTGGGACAT+TGG | - | chr5.4:18010851-18010870 | MS.gene070112:intron | 35.0% |
| !! | GGAAGAAAGAAAGTCTTGTT+CGG | + | chr5.4:18014436-18014455 | None:intergenic | 35.0% |
| !!! | CAAAGTTTTGGATGGTCATA+TGG | + | chr5.4:18011902-18011921 | None:intergenic | 35.0% |
| !!! | GACACTCATTTTGAAATGGA+GGG | + | chr5.4:18012229-18012248 | None:intergenic | 35.0% |
| ACCTCTTCTCCTTAAACCTT+CGG | + | chr5.4:18013419-18013438 | None:intergenic | 40.0% | |
| AGCCAATTGCACACAGATTA+AGG | - | chr5.4:18012254-18012273 | MS.gene070112:intron | 40.0% | |
| AGCTCCAATCATCCAATCAT+GGG | - | chr5.4:18012949-18012968 | MS.gene070112:intron | 40.0% | |
| AGTCACAAAAACTTACGAGG+AGG | - | chr5.4:18011983-18012002 | MS.gene070112:intron | 40.0% | |
| AGTTCCCATGATTGGATGAT+TGG | + | chr5.4:18012956-18012975 | None:intergenic | 40.0% | |
| CAACAAGACAGTAGGATAAG+TGG | + | chr5.4:18011943-18011962 | None:intergenic | 40.0% | |
| CGTTTCCTACCTTCAGAATT+TGG | - | chr5.4:18013898-18013917 | MS.gene070112:intron | 40.0% | |
| GAGAAATGGGAGAAACTTAC+TGG | - | chr5.4:18014384-18014403 | MS.gene070112:CDS | 40.0% | |
| GAGCTAGCTAGGTAGATTTA+CGG | + | chr5.4:18012934-18012953 | None:intergenic | 40.0% | |
| GATATGTCAGAGAAGGGAAA+GGG | - | chr5.4:18013498-18013517 | MS.gene070112:intron | 40.0% | |
| GATGTAAGTGAAAGGGATGT+TGG | + | chr5.4:18014013-18014032 | None:intergenic | 40.0% | |
| GCTATCTCTATTTATGGGCT+AGG | + | chr5.4:18011691-18011710 | None:intergenic | 40.0% | |
| GGCTATAAGGAAAGCAATTG+AGG | - | chr5.4:18013984-18014003 | MS.gene070112:intron | 40.0% | |
| GTACTTCAACGTCCAGATAT+AGG | - | chr5.4:18010421-18010440 | MS.gene070112:CDS | 40.0% | |
| TAGCTCCAATCATCCAATCA+TGG | - | chr5.4:18012948-18012967 | MS.gene070112:intron | 40.0% | |
| TCAGTATCAAGCCCTATATC+TGG | + | chr5.4:18010436-18010455 | None:intergenic | 40.0% | |
| TCAGTATTCATAGTTGTGCG+AGG | + | chr5.4:18013015-18013034 | None:intergenic | 40.0% | |
| TCATCAAATGTGACTCTTCC+TGG | + | chr5.4:18013958-18013977 | None:intergenic | 40.0% | |
| TCGAAAATGAACTCCAGACA+TGG | + | chr5.4:18010575-18010594 | None:intergenic | 40.0% | |
| TGTCCCTACATGAAATGGTT+GGG | - | chr5.4:18011292-18011311 | MS.gene070112:intron | 40.0% | |
| TGTGAGAGAAAAGTTGGAGA+GGG | - | chr5.4:18012369-18012388 | MS.gene070112:intron | 40.0% | |
| TTGGAGAGGGTAAAGTTGAA+AGG | - | chr5.4:18012382-18012401 | MS.gene070112:intron | 40.0% | |
| TTGTCCCTACATGAAATGGT+TGG | - | chr5.4:18011291-18011310 | MS.gene070112:intron | 40.0% | |
| ! | AAAGAGCAAGGTTCTAGTTG+TGG | - | chr5.4:18010333-18010352 | MS.gene070112:CDS | 40.0% |
| ! | AAGAGCAAGGTTCTAGTTGT+GGG | - | chr5.4:18010334-18010353 | MS.gene070112:CDS | 40.0% |
| ! | AGCATCAAAGCTTTATCCAG+AGG | - | chr5.4:18014649-18014668 | MS.gene070112:CDS | 40.0% |
| ! | CTTTGAGTGAGGATGTTTTC+TGG | + | chr5.4:18014354-18014373 | None:intergenic | 40.0% |
| ! | GTGAAGGCAAGTTTAGAACA+AGG | - | chr5.4:18010385-18010404 | MS.gene070112:CDS | 40.0% |
| ! | TGTCTTGTTGCCTCAAAGAT+TGG | - | chr5.4:18011953-18011972 | MS.gene070112:intron | 40.0% |
| !! | GTTGTTATTTGCACCATGTC+TGG | - | chr5.4:18010559-18010578 | MS.gene070112:intron | 40.0% |
| !!! | CGACACTCATTTTGAAATGG+AGG | + | chr5.4:18012230-18012249 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr5.4:18012473-18012492 | MS.gene070112:intron | 40.0% |
| !!! | TGACACTCATTTTGAAACGG+AGG | - | chr5.4:18012472-18012491 | MS.gene070112:intron | 40.0% |
| AAGGTTGTTCTCTATGGCGA+CGG | - | chr5.4:18014105-18014124 | MS.gene070112:intron | 45.0% | |
| ACTTCAGGGTCCAATCTTTG+AGG | + | chr5.4:18011966-18011985 | None:intergenic | 45.0% | |
| AGCCCCAACCATTTCATGTA+GGG | + | chr5.4:18011298-18011317 | None:intergenic | 45.0% | |
| ATCTGGACGTTGAAGTACGT+AGG | + | chr5.4:18010419-18010438 | None:intergenic | 45.0% | |
| ATTGGTGTGGAATGCAGGTT+TGG | - | chr5.4:18014538-18014557 | MS.gene070112:CDS | 45.0% | |
| CCTACCTTCAGAATTTGGGA+TGG | - | chr5.4:18013903-18013922 | MS.gene070112:intron | 45.0% | |
| GAAACTAGGTGCTCATCTTG+TGG | - | chr5.4:18010483-18010502 | MS.gene070112:intron | 45.0% | |
| GAAATGGTTGGGGCTATGTT+TGG | - | chr5.4:18011303-18011322 | MS.gene070112:intron | 45.0% | |
| GGATATGTCAGAGAAGGGAA+AGG | - | chr5.4:18013497-18013516 | MS.gene070112:intron | 45.0% | |
| GGTAGATGCTGTGAAACTAG+TGG | - | chr5.4:18010534-18010553 | MS.gene070112:intron | 45.0% | |
| GTCCCTACATGAAATGGTTG+GGG | - | chr5.4:18011293-18011312 | MS.gene070112:intron | 45.0% | |
| GTGTGAGAGAAAAGTTGGAG+AGG | - | chr5.4:18012368-18012387 | MS.gene070112:intron | 45.0% | |
| GTTGGTTGGATGCATTCGTT+AGG | + | chr5.4:18013386-18013405 | None:intergenic | 45.0% | |
| TAATGGTAGAGGTTGTGGAG+AGG | - | chr5.4:18013524-18013543 | MS.gene070112:intron | 45.0% | |
| TAGCCCCAACCATTTCATGT+AGG | + | chr5.4:18011299-18011318 | None:intergenic | 45.0% | |
| TATGGCGACGGTAATGTCAA+AGG | - | chr5.4:18014117-18014136 | MS.gene070112:intron | 45.0% | |
| TCATTGTAGCAGTACATCGG+TGG | + | chr5.4:18013464-18013483 | None:intergenic | 45.0% | |
| TCCCATTTGAGAGAGGTTAC+CGG | + | chr5.4:18014064-18014083 | None:intergenic | 45.0% | |
| TCTTGATTGGTGTGGAATGC+AGG | - | chr5.4:18014533-18014552 | MS.gene070112:CDS | 45.0% | |
| TGGCGGAGATGTAAGTGAAA+GGG | + | chr5.4:18014020-18014039 | None:intergenic | 45.0% | |
| TTGGATGATTGGAGCTAGCT+AGG | + | chr5.4:18012945-18012964 | None:intergenic | 45.0% | |
| TTGGCGGAGATGTAAGTGAA+AGG | + | chr5.4:18014021-18014040 | None:intergenic | 45.0% | |
| TTTGCTAACCAGTGCCCTTA+GGG | - | chr5.4:18010717-18010736 | MS.gene070112:CDS | 45.0% | |
| ! | AGAGCAAGGTTCTAGTTGTG+GGG | - | chr5.4:18010335-18010354 | MS.gene070112:CDS | 45.0% |
| ! | AGAGTGTTCCCATTTGAGAG+AGG | + | chr5.4:18014071-18014090 | None:intergenic | 45.0% |
| ! | CAACTAGCTCTCTTTGAGTG+AGG | + | chr5.4:18014365-18014384 | None:intergenic | 45.0% |
| ! | CCATCCCAAATTCTGAAGGT+AGG | + | chr5.4:18013906-18013925 | None:intergenic | 45.0% |
| ! | TGAGTGAGGATGTTTTCTGG+TGG | + | chr5.4:18014351-18014370 | None:intergenic | 45.0% |
| ! | TTCAGAATTTGGGATGGACC+CGG | - | chr5.4:18013909-18013928 | MS.gene070112:intron | 45.0% |
| ! | TTTTGCTAACCAGTGCCCTT+AGG | - | chr5.4:18010716-18010735 | MS.gene070112:CDS | 45.0% |
| !! | CTTTGAGGCAACAAGACAGT+AGG | + | chr5.4:18011951-18011970 | None:intergenic | 45.0% |
| AAAGTAGCCCGCGAAACAGT+TGG | + | chr5.4:18014040-18014059 | None:intergenic | 50.0% | |
| AATGCAGGTTTGGACCTTGC+AGG | - | chr5.4:18014548-18014567 | MS.gene070112:CDS | 50.0% | |
| AGAAATGCCCCACTGCTACT+TGG | + | chr5.4:18014574-18014593 | None:intergenic | 50.0% | |
| AGGTAGGAAACGCTAGTGGA+AGG | + | chr5.4:18013890-18013909 | None:intergenic | 50.0% | |
| AGTGCATGTCCCATAAGAGC+CGG | + | chr5.4:18013931-18013950 | None:intergenic | 50.0% | |
| ATGCGTGTGTATTGCACCTC+TGG | + | chr5.4:18014668-18014687 | None:intergenic | 50.0% | |
| ATGGGACATGCACTTGAACC+AGG | - | chr5.4:18013937-18013956 | MS.gene070112:intron | 50.0% | |
| ATGTCAGAGAAGGGAAAGGG+TGG | - | chr5.4:18013501-18013520 | MS.gene070112:intron | 50.0% | |
| CAAGGATGCAGAGAACGTCA+AGG | - | chr5.4:18010636-18010655 | MS.gene070112:CDS | 50.0% | |
| CGGGACAAGGTTGTTCTCTA+TGG | - | chr5.4:18014099-18014118 | MS.gene070112:intron | 50.0% | |
| CTAGGTGCTCATCTTGTGGA+AGG | - | chr5.4:18010487-18010506 | MS.gene070112:intron | 50.0% | |
| CTGAAGGTAGGAAACGCTAG+TGG | + | chr5.4:18013894-18013913 | None:intergenic | 50.0% | |
| GACGTTCTCTGCATCCTTGA+TGG | + | chr5.4:18010635-18010654 | None:intergenic | 50.0% | |
| GAGAAGGGAAAGGGTGGTAA+TGG | - | chr5.4:18013507-18013526 | MS.gene070112:intron | 50.0% | |
| GCCGAAGGTTTAAGGAGAAG+AGG | - | chr5.4:18013415-18013434 | MS.gene070112:intron | 50.0% | |
| GCCGGTAACCTCTCTCAAAT+GGG | - | chr5.4:18014060-18014079 | MS.gene070112:intron | 50.0% | |
| GGGTCCATCCCAAATTCTGA+AGG | + | chr5.4:18013910-18013929 | None:intergenic | 50.0% | |
| GGTTGGATGCATTCGTTAGG+TGG | + | chr5.4:18013383-18013402 | None:intergenic | 50.0% | |
| GGTTGTGGAGAGGTGAACAA+AGG | - | chr5.4:18013534-18013553 | MS.gene070112:intron | 50.0% | |
| GGTTGTTGAAGACACTCGTG+TGG | - | chr5.4:18013555-18013574 | MS.gene070112:intron | 50.0% | |
| TAGAGAACAACCTTGTCCCG+TGG | + | chr5.4:18014099-18014118 | None:intergenic | 50.0% | |
| TGCCGGTAACCTCTCTCAAA+TGG | - | chr5.4:18014059-18014078 | MS.gene070112:intron | 50.0% | |
| TGGGAACACTCTTTCCTCCA+CGG | - | chr5.4:18014079-18014098 | MS.gene070112:intron | 50.0% | |
| ! | AGAGGTGCAATACACACGCA+TGG | - | chr5.4:18014667-18014686 | MS.gene070112:CDS | 50.0% |
| ! | AGCAAGGTTCTAGTTGTGGG+GGG | - | chr5.4:18010337-18010356 | MS.gene070112:CDS | 50.0% |
| ! | GAGCAAGGTTCTAGTTGTGG+GGG | - | chr5.4:18010336-18010355 | MS.gene070112:CDS | 50.0% |
| !! | GGAAAGGGTGGTAATGGTAG+AGG | - | chr5.4:18013513-18013532 | MS.gene070112:intron | 50.0% |
| !! | GGGGTACTGGGTATATTGGT+AGG | - | chr5.4:18010356-18010375 | MS.gene070112:CDS | 50.0% |
| !! | GGTGGTAATGGTAGAGGTTG+TGG | - | chr5.4:18013519-18013538 | MS.gene070112:intron | 50.0% |
| !! | TTCTAGTTGTGGGGGGTACT+GGG | - | chr5.4:18010344-18010363 | MS.gene070112:CDS | 50.0% |
| AACCAGTGCCCTTAGGGCAA+TGG | - | chr5.4:18010723-18010742 | MS.gene070112:CDS | 55.0% | |
| ACTCTTTCCTCCACGGGACA+AGG | - | chr5.4:18014086-18014105 | MS.gene070112:intron | 55.0% | |
| AGAACAACCTTGTCCCGTGG+AGG | + | chr5.4:18014096-18014115 | None:intergenic | 55.0% | |
| ATCTCCGCCAACTGTTTCGC+GGG | - | chr5.4:18014030-18014049 | MS.gene070112:intron | 55.0% | |
| CATCTCCGCCAACTGTTTCG+CGG | - | chr5.4:18014029-18014048 | MS.gene070112:intron | 55.0% | |
| CGAATGCATCCAACCAACCG+CGG | - | chr5.4:18013388-18013407 | MS.gene070112:intron | 55.0% | |
| CTTGCAGGCCAAGTAGCAGT+GGG | - | chr5.4:18014563-18014582 | MS.gene070112:CDS | 55.0% | |
| GGGAACACTCTTTCCTCCAC+GGG | - | chr5.4:18014080-18014099 | MS.gene070112:intron | 55.0% | |
| GTGCATGTCCCATAAGAGCC+GGG | + | chr5.4:18013930-18013949 | None:intergenic | 55.0% | |
| TGAAGACACTCGTGTGGTCG+TGG | - | chr5.4:18013561-18013580 | MS.gene070112:intron | 55.0% | |
| TTGCAGGCCAAGTAGCAGTG+GGG | - | chr5.4:18014564-18014583 | MS.gene070112:CDS | 55.0% | |
| ! | AACCATTGCCCTAAGGGCAC+TGG | + | chr5.4:18010728-18010747 | None:intergenic | 55.0% |
| ! | GTTCTAGTTGTGGGGGGTAC+TGG | - | chr5.4:18010343-18010362 | MS.gene070112:CDS | 55.0% |
| ! | TGTTTCGCGGGCTACTTTGC+CGG | - | chr5.4:18014042-18014061 | MS.gene070112:intron | 55.0% |
| !! | GTGGGGGGTACTGGGTATAT+TGG | - | chr5.4:18010352-18010371 | MS.gene070112:CDS | 55.0% |
| ATGCATCCAACCAACCGCGG+CGG | - | chr5.4:18013391-18013410 | MS.gene070112:intron | 60.0% | |
| CCTTGCAGGCCAAGTAGCAG+TGG | - | chr5.4:18014562-18014581 | MS.gene070112:CDS | 60.0% | |
| GGGATGGACCCGGCTCTTAT+GGG | - | chr5.4:18013919-18013938 | MS.gene070112:intron | 60.0% | |
| GTAGCCCGCGAAACAGTTGG+CGG | + | chr5.4:18014037-18014056 | None:intergenic | 60.0% | |
| TGGGATGGACCCGGCTCTTA+TGG | - | chr5.4:18013918-18013937 | MS.gene070112:intron | 60.0% | |
| TTAAACCTTCGGCTCCGCCG+CGG | + | chr5.4:18013408-18013427 | None:intergenic | 60.0% | |
| ! | CCACTGCTACTTGGCCTGCA+AGG | + | chr5.4:18014565-18014584 | None:intergenic | 60.0% |
| GCGGCGGAGCCGAAGGTTTA+AGG | - | chr5.4:18013407-18013426 | MS.gene070112:intron | 65.0% | |
| ACCAACCGCGGCGGAGCCGA+AGG | - | chr5.4:18013400-18013419 | MS.gene070112:intron | 75.0% | |
| ACCTTCGGCTCCGCCGCGGT+TGG | + | chr5.4:18013404-18013423 | None:intergenic | 75.0% | |
| TCGGCTCCGCCGCGGTTGGT+TGG | + | chr5.4:18013400-18013419 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 18010325 | 18014715 | 18010325 | ID=MS.gene070112 |
| chr5.4 | mRNA | 18010325 | 18014715 | 18010325 | ID=MS.gene070112.t1;Parent=MS.gene070112 |
| chr5.4 | exon | 18014383 | 18014715 | 18014383 | ID=MS.gene070112.t1.exon1;Parent=MS.gene070112.t1 |
| chr5.4 | CDS | 18014383 | 18014715 | 18014383 | ID=cds.MS.gene070112.t1;Parent=MS.gene070112.t1 |
| chr5.4 | exon | 18010902 | 18011142 | 18010902 | ID=MS.gene070112.t1.exon2;Parent=MS.gene070112.t1 |
| chr5.4 | CDS | 18010902 | 18011142 | 18010902 | ID=cds.MS.gene070112.t1;Parent=MS.gene070112.t1 |
| chr5.4 | exon | 18010578 | 18010781 | 18010578 | ID=MS.gene070112.t1.exon3;Parent=MS.gene070112.t1 |
| chr5.4 | CDS | 18010578 | 18010781 | 18010578 | ID=cds.MS.gene070112.t1;Parent=MS.gene070112.t1 |
| chr5.4 | exon | 18010325 | 18010485 | 18010325 | ID=MS.gene070112.t1.exon4;Parent=MS.gene070112.t1 |
| chr5.4 | CDS | 18010325 | 18010485 | 18010325 | ID=cds.MS.gene070112.t1;Parent=MS.gene070112.t1 |
| Gene Sequence |
| Protein sequence |
