AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049356


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049356.t1 MTR_3g095010 98.714 700 9 0 1 700 1 700 0.0 1421
MS.gene049356.t1 MTR_2g095440 30.345 580 372 10 59 632 21 574 5.17e-77 258
MS.gene049356.t1 MTR_2g095440 26.316 247 149 4 433 650 64 306 2.82e-19 92.4
MS.gene049356.t1 MTR_2g095440 30.943 530 344 7 106 632 4 514 1.64e-76 255
MS.gene049356.t1 MTR_2g095440 26.316 247 149 4 433 650 4 246 4.83e-19 91.7
MS.gene049356.t1 MTR_2g095440 31.002 529 343 7 107 632 11 520 2.71e-76 255
MS.gene049356.t1 MTR_2g095440 26.531 245 147 4 435 650 12 252 4.49e-19 91.7
MS.gene049356.t1 MTR_4g057795 30.540 537 351 7 99 632 57 574 6.74e-76 255
MS.gene049356.t1 MTR_4g057795 26.316 247 149 4 433 650 64 306 2.04e-19 93.2
MS.gene049356.t1 MTR_4g057795 31.410 468 306 6 168 632 9 464 1.68e-67 230
MS.gene049356.t1 MTR_4g057795 27.586 145 102 1 506 650 55 196 5.63e-14 75.5
MS.gene049356.t1 MTR_8g075040 28.922 612 368 14 83 656 184 766 1.93e-67 236
MS.gene049356.t1 MTR_7g018380 28.502 614 370 14 83 656 131 715 9.33e-67 233
MS.gene049356.t1 MTR_3g080970 29.189 555 364 10 97 636 166 706 1.42e-66 233
MS.gene049356.t1 MTR_1g066620 29.701 569 355 12 116 656 10 561 5.67e-65 225
MS.gene049356.t1 MTR_3g096300 31.383 188 87 6 422 583 21 192 6.42e-16 79.0
MS.gene049356.t1 MTR_8g442660 31.383 188 87 6 422 583 21 192 6.42e-16 79.0
MS.gene049356.t1 MTR_4g081190 28.063 253 147 9 405 634 971 1211 6.84e-15 79.3
MS.gene049356.t1 MTR_1g063170 27.236 246 152 8 430 650 1052 1295 1.40e-14 78.6
MS.gene049356.t1 MTR_8g022270 26.383 235 149 7 427 639 592 824 3.32e-14 77.0
MS.gene049356.t1 MTR_7g102070 26.016 246 155 8 430 650 1078 1321 5.72e-14 76.3
MS.gene049356.t1 MTR_1567s0010 29.353 201 123 6 448 630 241 440 6.71e-14 75.1
MS.gene049356.t1 MTR_3g093430 27.477 222 128 9 411 606 345 559 2.86e-12 70.9
MS.gene049356.t1 MTR_1g059830 29.231 195 111 7 437 606 384 576 3.80e-12 70.1
MS.gene049356.t1 MTR_1g025560 29.592 196 116 6 433 606 994 1189 1.19e-11 68.9
MS.gene049356.t1 MTR_5g029750 30.811 185 103 7 444 606 370 551 1.28e-11 68.9
MS.gene049356.t1 MTR_7g079540 27.826 230 128 6 432 624 85 313 2.96e-11 65.9
MS.gene049356.t1 MTR_3g437870 25.094 267 169 8 452 688 642 907 3.32e-11 67.4
MS.gene049356.t1 MTR_3g086430 28.079 203 124 6 444 626 1015 1215 7.93e-11 66.2
MS.gene049356.t1 MTR_1g114170 30.178 169 103 5 461 619 377 540 8.55e-11 65.5
MS.gene049356.t1 MTR_7g079540 28.251 223 122 6 432 617 85 306 9.48e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049356.t1 AT5G64840 78.955 708 125 6 1 700 1 692 0.0 1082
MS.gene049356.t1 AT5G09930 74.290 704 151 5 1 700 1 678 0.0 996
MS.gene049356.t1 AT5G60790 29.644 533 353 6 103 632 66 579 1.68e-72 246
MS.gene049356.t1 AT5G60790 26.016 246 151 4 433 650 69 311 6.27e-18 88.6
MS.gene049356.t1 AT1G64550 29.242 554 368 10 96 636 165 707 2.05e-69 241
MS.gene049356.t1 AT3G54540 28.242 563 360 12 106 638 163 711 1.87e-63 224
MS.gene049356.t1 AT3G54540 26.421 299 180 5 433 692 163 460 5.52e-24 107
MS.gene049356.t1 AT3G54540 28.242 563 360 12 106 638 163 711 1.87e-63 224
MS.gene049356.t1 AT3G54540 26.421 299 180 5 433 692 163 460 5.52e-24 107
MS.gene049356.t1 AT1G28010 26.961 204 123 6 447 628 389 588 6.88e-13 72.8
MS.gene049356.t1 AT1G28010 26.396 197 121 6 433 606 1006 1201 2.65e-11 67.8
MS.gene049356.t1 AT1G27940 25.778 225 137 8 428 628 155 373 6.96e-13 72.8
MS.gene049356.t1 AT1G27940 26.904 197 120 6 433 606 790 985 1.56e-12 71.6
MS.gene049356.t1 AT4G33460 31.500 200 98 9 433 606 40 226 8.29e-13 69.7
MS.gene049356.t1 AT1G27940 26.961 204 123 6 447 628 388 587 1.41e-12 72.0
MS.gene049356.t1 AT1G27940 26.904 197 120 6 433 606 1004 1199 2.99e-12 70.9
MS.gene049356.t1 AT4G25960 27.391 230 143 7 444 653 415 640 3.89e-12 70.5
MS.gene049356.t1 AT5G52860 25.547 274 177 6 452 699 49 321 4.74e-12 69.7
MS.gene049356.t1 AT3G28390 25.974 231 147 9 447 657 364 590 1.35e-11 68.6
MS.gene049356.t1 AT3G28345 23.132 281 188 10 430 686 356 632 2.23e-11 68.2
MS.gene049356.t1 AT1G65410 30.374 214 111 9 106 310 85 269 2.27e-11 66.2
MS.gene049356.t1 AT1G10680 27.322 183 112 5 444 606 375 556 3.61e-11 67.4
MS.gene049356.t1 AT3G28415 27.556 225 137 9 447 650 363 582 3.97e-11 67.4
MS.gene049356.t1 AT3G28415 27.556 225 137 9 447 650 355 574 4.07e-11 67.0
MS.gene049356.t1 AT1G10680 27.322 183 112 5 444 606 375 556 4.58e-11 67.0
MS.gene049356.t1 AT5G46540 23.140 242 146 6 408 628 1000 1222 4.81e-11 67.0

Find 169 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATTTGCAGTATTATT+TGG 0.118260 3.1:+75764117 MS.gene049356:intron
TTGGATTTGGCTTTCAATTT+AGG 0.142201 3.1:-75764202 None:intergenic
TACTTTACTAAAATTGATTA+TGG 0.188943 3.1:+75761271 MS.gene049356:CDS
ACCATCAACTCTACTTGTTT+TGG 0.234739 3.1:+75762634 MS.gene049356:CDS
ACGAGCTCAGGCTGTGAATT+TGG 0.235081 3.1:+75759612 MS.gene049356:CDS
AATGGAGGTTGCGGGGAAAT+TGG 0.247694 3.1:+75759504 MS.gene049356:CDS
GGAGTTGATGGGGAGGCTTT+TGG 0.263336 3.1:+75759567 MS.gene049356:CDS
GGTTAATTGGGAAGTGAAAA+AGG 0.267296 3.1:+75759282 MS.gene049356:CDS
CAGAAATTGGAAAGACTTCT+TGG 0.282365 3.1:+75760967 MS.gene049356:intron
GACGATATTAAAGGACTTCT+TGG 0.283294 3.1:+75761541 MS.gene049356:CDS
TACCTTTGACATCTTGGATT+TGG 0.289284 3.1:-75764215 None:intergenic
GAAGTTTACCTTTGACATCT+TGG 0.293270 3.1:-75764221 None:intergenic
GTGGGTTTAGTTGGTGTAAA+TGG 0.300569 3.1:+75759313 MS.gene049356:CDS
GGTTTGGAGGAACCGGATTC+GGG 0.308979 3.1:+75759370 MS.gene049356:CDS
TCCAAAACAAGTAGAGTTGA+TGG 0.315178 3.1:-75762635 None:intergenic
ACAGTTAGGAACTTGGATTT+TGG 0.319199 3.1:+75761075 MS.gene049356:CDS
ACCTCAAGCATTTCTTTAGA+AGG 0.324032 3.1:-75762683 None:intergenic
AGGTTTGGAGGAACCGGATT+CGG 0.327589 3.1:+75759369 MS.gene049356:CDS
TCGCCTTTGAAAGAATATAC+TGG 0.341499 3.1:-75760483 None:intergenic
TTAGGTGCCGGAGCAAGTTC+TGG 0.354938 3.1:+75760583 MS.gene049356:CDS
AACGGAAACAAATGAAAATC+AGG 0.359605 3.1:+75761016 MS.gene049356:CDS
GATGAGGATTATTGCAGGTT+TGG 0.363247 3.1:+75759354 MS.gene049356:CDS
TGTGAATGATTTGGAGTTGA+TGG 0.367327 3.1:+75759555 MS.gene049356:CDS
TTGATGCCTGAGCTTGGTTT+TGG 0.370792 3.1:+75759661 MS.gene049356:CDS
ACTTTACTAAAATTGATTAT+GGG 0.374049 3.1:+75761272 MS.gene049356:CDS
GTGTTAGTGTTGAAGGTGTT+GGG 0.375541 3.1:-75759019 None:intergenic
ACAGGCTGAGGCACTTGATC+TGG 0.376554 3.1:+75761468 MS.gene049356:intron
TAACTATTTCGAGCAGAATC+AGG 0.379580 3.1:+75761349 MS.gene049356:CDS
GAGTGCTTTCAAAGAGGAAA+TGG 0.382990 3.1:+75759486 MS.gene049356:CDS
TTCATTTGTTTCCGTTCAAA+TGG 0.384165 3.1:-75761009 None:intergenic
GGGGTTAGTGTTAGTGTTGA+AGG 0.391042 3.1:-75759026 None:intergenic
TTAATCACATTCCCCGAATC+CGG 0.391790 3.1:-75759382 None:intergenic
TGAGGGTTCTGTGAATGATT+TGG 0.394197 3.1:+75759546 MS.gene049356:CDS
ATTGCCATTCTTGGTCCAAA+TGG 0.399808 3.1:+75761236 MS.gene049356:CDS
AAAGAGGAAATGGAGGTTGC+GGG 0.405864 3.1:+75759496 MS.gene049356:CDS
GTACTCTTGCCACATCCATT+TGG 0.408591 3.1:-75761251 None:intergenic
TGGAGGAGTGACGATATTAA+AGG 0.411374 3.1:+75761532 MS.gene049356:CDS
AGTGTTGAAGGTGTTGGGTT+TGG 0.414116 3.1:-75759014 None:intergenic
GGTGAGAAAGTGGGTTTAGT+TGG 0.417873 3.1:+75759304 MS.gene049356:CDS
TCATCTAACAACAACAAATC+TGG 0.426653 3.1:-75760289 None:intergenic
CTCCGGTGAGGTCGAGGTGG+TGG 0.428069 3.1:-75758934 None:intergenic
TAGAGGAAGCTGCCGAGGAC+TGG 0.429062 3.1:+75761512 MS.gene049356:CDS
AGTGTTAGTGTTGAAGGTGT+TGG 0.429428 3.1:-75759020 None:intergenic
GGCAAATCTTACAATTGAAA+GGG 0.431561 3.1:+75761205 MS.gene049356:CDS
TATTGCAGGTTTGGAGGAAC+CGG 0.432241 3.1:+75759363 MS.gene049356:CDS
TTTGAAGTGAAGAATCGATT+GGG 0.440366 3.1:-75759046 None:intergenic
AGGATAACTTCACCGCTGAT+TGG 0.444666 3.1:-75761305 None:intergenic
AGAGAGTTGATAAGCAGGTT+AGG 0.447090 3.1:+75760565 MS.gene049356:CDS
ACGCAGATGAGGATTATTGC+AGG 0.447820 3.1:+75759349 MS.gene049356:CDS
TGATTCTGCTCGAAATAGTT+AGG 0.448814 3.1:-75761347 None:intergenic
CGATGAGATGAGTGTGGGAT+AGG 0.448984 3.1:-75758991 None:intergenic
TCAAGATCAAGGTGATTTGT+AGG 0.461063 3.1:-75760313 None:intergenic
GTCGAGGTGGTGGAGCTTTG+AGG 0.461557 3.1:-75758924 None:intergenic
CGTTTCGTCTGGTGTGAAGT+TGG 0.462519 3.1:+75759216 MS.gene049356:CDS
TCAGCGGTGAAGTTATCCTT+GGG 0.465273 3.1:+75761309 MS.gene049356:CDS
TGGAGAAGAATCTTGATGCC+AGG 0.465875 3.1:+75764137 MS.gene049356:CDS
TGTTGTAACAGTTAGGAACT+TGG 0.467480 3.1:+75761068 MS.gene049356:CDS
AGTTTCGTCCACGGCGGCTA+CGG 0.469289 3.1:-75759098 None:intergenic
ATCAGCGGTGAAGTTATCCT+TGG 0.477715 3.1:+75761308 MS.gene049356:CDS
TTAGTTGGTGTAAATGGTGC+GGG 0.479604 3.1:+75759319 MS.gene049356:CDS
CTTTGTCGTCAAGCTCAGCC+TGG 0.480481 3.1:-75764177 None:intergenic
ACATCCATTTGGACCAAGAA+TGG 0.482881 3.1:-75761240 None:intergenic
GGAGCTTCAAGCGTTTCGTC+TGG 0.483696 3.1:+75759205 MS.gene049356:CDS
TTCCCAGTATATTCTTTCAA+AGG 0.484954 3.1:+75760480 MS.gene049356:CDS
AGACGAAACGCTTGAAGCTC+CGG 0.485415 3.1:-75759203 None:intergenic
GAGGATTATTGCAGGTTTGG+AGG 0.486864 3.1:+75759357 MS.gene049356:CDS
TTTGCTTCAGAGACGAGCTC+AGG 0.488113 3.1:+75759600 MS.gene049356:CDS
ACGATATTAAAGGACTTCTT+GGG 0.489351 3.1:+75761542 MS.gene049356:CDS
CGCCTTTGAAAGAATATACT+GGG 0.490473 3.1:-75760482 None:intergenic
AGTTAAAGATGGCACTGTGC+AGG 0.495959 3.1:+75762929 MS.gene049356:CDS
AGGCAAATCTTACAATTGAA+AGG 0.498825 3.1:+75761204 MS.gene049356:CDS
GAAGATCTGTTGTAACAGTT+AGG 0.500389 3.1:+75761061 MS.gene049356:CDS
GGGTGTATCCAGGACATTTG+AGG 0.501010 3.1:+75760450 MS.gene049356:CDS
ATATTCTTTCAAAGGCGACT+TGG 0.503007 3.1:+75760488 MS.gene049356:CDS
ATAATTTCCCTCAAATGTCC+TGG 0.504858 3.1:-75760458 None:intergenic
CCGTGCTTCGACTGCTGAGA+AGG 0.506367 3.1:+75760606 MS.gene049356:CDS
GGATGAACCAACGAATCACT+TGG 0.511588 3.1:+75762655 MS.gene049356:CDS
GGTATATCCAAGTGATTCGT+TGG 0.512337 3.1:-75762662 None:intergenic
CTTCCACTGCTTCCACGCAC+AGG 0.512959 3.1:-75761042 None:intergenic
GTGAATGATTTGGAGTTGAT+GGG 0.513667 3.1:+75759556 MS.gene049356:CDS
TGAAGATTATCTTAACAAGC+AGG 0.517743 3.1:+75760351 MS.gene049356:CDS
ACTCAATTGTGTCAAGATCA+AGG 0.517929 3.1:-75760324 None:intergenic
GTGCAAAGAATTCAAAGAGA+TGG 0.519064 3.1:+75764399 MS.gene049356:CDS
GGCACTGTGCAGGATTATGC+TGG 0.519823 3.1:+75762939 MS.gene049356:CDS
ATCGTCACTCCTCCAGTCCT+CGG 0.521542 3.1:-75761524 None:intergenic
CAAAGAGGAAATGGAGGTTG+CGG 0.522263 3.1:+75759495 MS.gene049356:CDS
TGAATGCTCCGGTGAGGTCG+AGG 0.525529 3.1:-75758940 None:intergenic
GGTGTATCCAGGACATTTGA+GGG 0.529834 3.1:+75760451 MS.gene049356:CDS
CAAGCAAAACAGAAGTCTAA+AGG 0.530649 3.1:+75764377 MS.gene049356:CDS
TTCCCTGTGCGTGGAAGCAG+TGG 0.531912 3.1:+75761039 MS.gene049356:CDS
TCGTTCATCGACTGAAGTAT+CGG 0.532089 3.1:-75759155 None:intergenic
AGTAAGTTGATGCCTGAGCT+TGG 0.532687 3.1:+75759655 MS.gene049356:CDS
TGTAGAGGATTCCGATAGGT+TGG 0.537166 3.1:+75759684 MS.gene049356:CDS
AGCACGGCCAGAACTTGCTC+CGG 0.538120 3.1:-75760590 None:intergenic
AATTTGAGGTTTCGCCGAGT+AGG 0.539440 3.1:+75759443 MS.gene049356:CDS
AAAGTGCAGAAGGCGCTTGA+GGG 0.540064 3.1:+75759529 MS.gene049356:CDS
AAACTGACATGGGTGTATCC+AGG 0.548307 3.1:+75760440 MS.gene049356:CDS
ATCATGAGATACGGTGATAA+CGG 0.548364 3.1:-75762868 None:intergenic
CTCCACCACCTCGACCTCAC+CGG 0.548859 3.1:+75758932 MS.gene049356:CDS
GACAGTAGAGGAAGCTGCCG+AGG 0.548939 3.1:+75761507 MS.gene049356:CDS
TCTATTGAGTGGTGGTGAGA+AGG 0.550123 3.1:+75761606 MS.gene049356:CDS
GAAAGTGCAGAAGGCGCTTG+AGG 0.550395 3.1:+75759528 MS.gene049356:CDS
AGGAAGCTGCCGAGGACTGG+AGG 0.551231 3.1:+75761515 MS.gene049356:CDS
TGTGGGATAGGGTGCGTGGA+AGG 0.551650 3.1:-75758979 None:intergenic
TTGATAAGCAGGTTAGGTGC+CGG 0.551653 3.1:+75760571 MS.gene049356:CDS
AAGGAAGAAGCAAAAGATGC+AGG 0.553204 3.1:+75764346 MS.gene049356:CDS
TGAGGTTTCGCCGAGTAGGA+CGG 0.553445 3.1:+75759447 MS.gene049356:CDS
AGAGTGATTGAAGTTAAAGA+TGG 0.555267 3.1:+75762918 MS.gene049356:CDS
TGAAACACAGTATGCTGCAT+GGG 0.558064 3.1:+75760513 MS.gene049356:CDS
GGAGAAGAATCTTGATGCCA+GGG 0.558623 3.1:+75764138 MS.gene049356:CDS
AAACAAGAGAGTTGATAAGC+AGG 0.561228 3.1:+75760560 MS.gene049356:CDS
GTTTGGCGATGAGATGAGTG+TGG 0.563673 3.1:-75758997 None:intergenic
CGGGAAAGACGACGCAGATG+AGG 0.567288 3.1:+75759338 MS.gene049356:CDS
AAAAGAAGCAACCAACCTAT+CGG 0.568234 3.1:-75759695 None:intergenic
GTTTATGAGTGCTTTCAAAG+AGG 0.568928 3.1:+75759480 MS.gene049356:CDS
ACCATCCAACACAATGGAGT+TGG 0.573181 3.1:+75758901 None:intergenic
AAAATCAGGTTCCCTGTGCG+TGG 0.579340 3.1:+75761030 MS.gene049356:CDS
TCTACACCAAAACCAAGCTC+AGG 0.581292 3.1:-75759667 None:intergenic
TTGAAGTGAAGAATCGATTG+GGG 0.582917 3.1:-75759045 None:intergenic
TTCGTCCACGGCGGCTACGG+CGG 0.583554 3.1:-75759095 None:intergenic
TGCTTTCAAAGAGGAAATGG+AGG 0.585578 3.1:+75759489 MS.gene049356:CDS
TTCCACTGCTTCCACGCACA+GGG 0.589830 3.1:-75761041 None:intergenic
CGTAAAGTTTCTCTATTGAG+TGG 0.590268 3.1:+75761595 MS.gene049356:CDS
TTGATCTTGACACAATTGAG+TGG 0.591241 3.1:+75760326 MS.gene049356:CDS
AGCTACTGAAGTTTCGTCCA+CGG 0.592252 3.1:-75759107 None:intergenic
GGCACTTGATCTGGAAAAGA+CGG 0.593050 3.1:+75761477 MS.gene049356:CDS
AACAATAAACAATCTAACAC+CGG 0.593481 3.1:+75759184 MS.gene049356:CDS
TTTAGTTGGTGTAAATGGTG+CGG 0.595148 3.1:+75759318 MS.gene049356:CDS
CCTTCTCAGCAGTCGAAGCA+CGG 0.596601 3.1:-75760606 None:intergenic
GAAATTGGAGAAAGTGCAGA+AGG 0.599509 3.1:+75759519 MS.gene049356:CDS
TGAATCGAGAATGAATGCTC+CGG 0.603746 3.1:-75758951 None:intergenic
GATGAGATGAGTGTGGGATA+GGG 0.605531 3.1:-75758990 None:intergenic
AAAGTACCGATCATGAGATA+CGG 0.606013 3.1:-75762877 None:intergenic
TCTTCCCTCACCGTCCTACT+CGG 0.608929 3.1:-75759457 None:intergenic
AGCCAAATCCAAGATGTCAA+AGG 0.614850 3.1:+75764213 MS.gene049356:CDS
ATGATTTGGAGTTGATGGGG+AGG 0.619037 3.1:+75759560 MS.gene049356:CDS
TTTATCCGCCGTAGCCGCCG+TGG 0.619187 3.1:+75759090 MS.gene049356:CDS
GCAAATCTTACAATTGAAAG+GGG 0.619588 3.1:+75761206 MS.gene049356:CDS
TCGTGAGAAATGATAACCAT+CGG 0.626896 3.1:-75760379 None:intergenic
AAAGTTTCTCTATTGAGTGG+TGG 0.627890 3.1:+75761598 MS.gene049356:CDS
ATCAGGCTGAGAAAGAAGCA+AGG 0.628611 3.1:+75764327 MS.gene049356:intron
ATTCTTGGTCCAAATGGATG+TGG 0.633025 3.1:+75761242 MS.gene049356:CDS
TGAGTGTGGGATAGGGTGCG+TGG 0.633289 3.1:-75758983 None:intergenic
TAACAAGCAGGATGTGCCGA+TGG 0.633293 3.1:+75760363 MS.gene049356:CDS
ATTGGAAAGACTTCTTGGAG+AGG 0.634177 3.1:+75760972 MS.gene049356:CDS
GCAATACATTATGCTCCCCA+AGG 0.635416 3.1:-75761325 None:intergenic
GTTTGGAGGAACCGGATTCG+GGG 0.635581 3.1:+75759371 MS.gene049356:CDS
TGGCAGATGAGGATGTGTCT+TGG 0.636187 3.1:+75759727 MS.gene049356:CDS
TAGTAGAGAAGCCATTTGAA+CGG 0.638546 3.1:+75760998 MS.gene049356:CDS
TTCGCCGAGTAGGACGGTGA+GGG 0.642046 3.1:+75759453 MS.gene049356:CDS
GACGGTGCTTGAGACAGTAG+AGG 0.647160 3.1:+75761495 MS.gene049356:CDS
TTAGTGGTGGATGGCAGATG+AGG 0.647334 3.1:+75759716 MS.gene049356:CDS
TTTCGCCGAGTAGGACGGTG+AGG 0.648524 3.1:+75759452 MS.gene049356:CDS
TTTGGCGATGAGATGAGTGT+GGG 0.650568 3.1:-75758996 None:intergenic
TTGGTGTAGAGGATTCCGAT+AGG 0.651148 3.1:+75759680 MS.gene049356:CDS
TGAATGATTTGGAGTTGATG+GGG 0.654862 3.1:+75759557 MS.gene049356:CDS
TTATCACCGTATCTCATGAT+CGG 0.661904 3.1:+75762871 MS.gene049356:CDS
ACCTTCTAAAGAAATGCTTG+AGG 0.662881 3.1:+75762682 MS.gene049356:CDS
TTGAAACACAGTATGCTGCA+TGG 0.664460 3.1:+75760512 MS.gene049356:CDS
GGAGGCAATAAATGAGTACG+AGG 0.667247 3.1:+75762842 MS.gene049356:intron
AAGAGGAAATGGAGGTTGCG+GGG 0.668229 3.1:+75759497 MS.gene049356:CDS
CGAGAATGAATGCTCCGGTG+AGG 0.684460 3.1:-75758946 None:intergenic
CAGCGGTGAAGTTATCCTTG+GGG 0.685607 3.1:+75761310 MS.gene049356:CDS
GGTTTAGAGAAGCCAATCAG+CGG 0.693977 3.1:+75761293 MS.gene049356:CDS
ATGCTCCGGTGAGGTCGAGG+TGG 0.714725 3.1:-75758937 None:intergenic
AAAATTGTGGAAACTGACAT+GGG 0.723967 3.1:+75760430 MS.gene049356:CDS
GAGGCAATAAATGAGTACGA+GGG 0.751118 3.1:+75762843 MS.gene049356:CDS
TACTGAAGTTTCGTCCACGG+CGG 0.754126 3.1:-75759104 None:intergenic
ACTTCAGTCGATGAACGACG+CGG 0.772804 3.1:+75759160 MS.gene049356:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATAAATCAATATTAGT+CGG - chr3.1:75762813-75762832 None:intergenic 10.0%
!! GATTTATCATTTAAAAATAA+CGG - chr3.1:75760100-75760119 None:intergenic 10.0%
!! TCAAAAAAAAAGAAAATATT+AGG - chr3.1:75762767-75762786 None:intergenic 10.0%
!! TTAAATGATAAATCAATAAA+GGG + chr3.1:75760106-75760125 MS.gene049356:intron 10.0%
!! TTTAAATGATAAATCAATAA+AGG + chr3.1:75760105-75760124 MS.gene049356:intron 10.0%
!!! AAACATTAATTTTTACAATA+CGG - chr3.1:75760890-75760909 None:intergenic 10.0%
!!! TTTTTTTTACTAAAATTAAG+GGG + chr3.1:75763728-75763747 MS.gene049356:intron 10.0%
!! AAAAAGAATACAAATGATTA+TGG + chr3.1:75760044-75760063 MS.gene049356:intron 15.0%
!! AAGTATATTTAAACAATCTA+TGG - chr3.1:75763021-75763040 None:intergenic 15.0%
!! AATATTAGAAAAACTTACAA+AGG + chr3.1:75759241-75759260 MS.gene049356:CDS 15.0%
!! ACTTTACTAAAATTGATTAT+GGG + chr3.1:75761272-75761291 MS.gene049356:CDS 15.0%
!! AGTATATTTAAACAATCTAT+GGG - chr3.1:75763020-75763039 None:intergenic 15.0%
!! ATATTCATTATATACAAAAC+TGG - chr3.1:75764031-75764050 None:intergenic 15.0%
!! ATGATTTATTCCTAATAAAA+AGG + chr3.1:75762112-75762131 MS.gene049356:intron 15.0%
!! TACTTTACTAAAATTGATTA+TGG + chr3.1:75761271-75761290 MS.gene049356:CDS 15.0%
!! TATTTAAGTGACTAATATTA+AGG - chr3.1:75760807-75760826 None:intergenic 15.0%
!! TGATTTATTCCTAATAAAAA+GGG + chr3.1:75762113-75762132 MS.gene049356:intron 15.0%
!! TTTAAAGAAATTTAAGAAAC+AGG + chr3.1:75761893-75761912 MS.gene049356:intron 15.0%
!!! ATTGATTTATTTGAAAAATC+AGG + chr3.1:75764310-75764329 MS.gene049356:intron 15.0%
!!! TAAATGTATTTGACAATTTT+GGG + chr3.1:75761999-75762018 MS.gene049356:intron 15.0%
!!! TTCTTAAATTTCTTTAAAGA+CGG - chr3.1:75761891-75761910 None:intergenic 15.0%
!!! TTCTTTTAAGTAAATAACAT+AGG - chr3.1:75760925-75760944 None:intergenic 15.0%
!! AAATTAAAACAGAATACATC+AGG - chr3.1:75763386-75763405 None:intergenic 20.0%
!! AATGATTATGGTTAGTAATT+AGG + chr3.1:75760056-75760075 MS.gene049356:intron 20.0%
!! ATTGCAATTTACAACTATTT+CGG - chr3.1:75760859-75760878 None:intergenic 20.0%
!! CATGTTTGTTTATTGTTATA+GGG + chr3.1:75764074-75764093 MS.gene049356:intron 20.0%
!! TAAATTATACCCTCAAAATT+AGG - chr3.1:75763912-75763931 None:intergenic 20.0%
!! TGAAAATTTGCAGTATTATT+TGG + chr3.1:75764117-75764136 MS.gene049356:intron 20.0%
!! TGAACATTAAATACAGATAA+AGG - chr3.1:75762730-75762749 None:intergenic 20.0%
!! TTGAATCATTCAATGAAAAA+TGG - chr3.1:75763971-75763990 None:intergenic 20.0%
!!! AAAAACGCAATTTTCATATT+TGG - chr3.1:75759415-75759434 None:intergenic 20.0%
!!! AAAGATTTTCAAAATGTCTA+AGG - chr3.1:75761837-75761856 None:intergenic 20.0%
!!! AAAGTTTTGAAATGAAGAAT+TGG - chr3.1:75761418-75761437 None:intergenic 20.0%
!!! ATTAATTTTTACAATACGGA+AGG - chr3.1:75760886-75760905 None:intergenic 20.0%
!!! CCATATTTTACTTTTTGAAA+GGG - chr3.1:75763498-75763517 None:intergenic 20.0%
!!! GTAAATGTATTTGACAATTT+TGG + chr3.1:75761998-75762017 MS.gene049356:intron 20.0%
!!! TATCATTTAAAAATAACGGA+CGG - chr3.1:75760096-75760115 None:intergenic 20.0%
!!! TCATTTTAAAGATACTTCAA+AGG - chr3.1:75761868-75761887 None:intergenic 20.0%
!!! TCCATATTTTACTTTTTGAA+AGG - chr3.1:75763499-75763518 None:intergenic 20.0%
!!! TGATGTATTCTGTTTTAATT+TGG + chr3.1:75763385-75763404 MS.gene049356:intron 20.0%
! AAAAGAAAATATTAGGCTGA+TGG - chr3.1:75762760-75762779 None:intergenic 25.0%
! AAAGAAAATATTAGGCTGAT+GGG - chr3.1:75762759-75762778 None:intergenic 25.0%
! AAATAAAGTGAAGAAATCTG+AGG - chr3.1:75763340-75763359 None:intergenic 25.0%
! AAATAACTTAGACGATCAAA+AGG + chr3.1:75763660-75763679 MS.gene049356:intron 25.0%
! AAATCTAGTTGTTGTCTAAA+AGG - chr3.1:75760012-75760031 None:intergenic 25.0%
! AACAATAAACAAACATGCAT+TGG - chr3.1:75764071-75764090 None:intergenic 25.0%
! AACAATAAACAATCTAACAC+CGG + chr3.1:75759184-75759203 MS.gene049356:CDS 25.0%
! AATAAAGTGAAGAAATCTGA+GGG - chr3.1:75763339-75763358 None:intergenic 25.0%
! AATCTAGTTGTTGTCTAAAA+GGG - chr3.1:75760011-75760030 None:intergenic 25.0%
! ACTTAAATAACCCAAAAATG+CGG + chr3.1:75760818-75760837 MS.gene049356:intron 25.0%
! AGTATATTGTGTATGTGTAT+AGG + chr3.1:75759793-75759812 MS.gene049356:intron 25.0%
! ATATAATGCAACACTATTAG+GGG + chr3.1:75762554-75762573 MS.gene049356:intron 25.0%
! ATGTAAAATTCCTATCACAA+AGG - chr3.1:75763413-75763432 None:intergenic 25.0%
! CATATAATGCAACACTATTA+GGG + chr3.1:75762553-75762572 MS.gene049356:intron 25.0%
! CATGTAATACTAATGATCAA+TGG - chr3.1:75763116-75763135 None:intergenic 25.0%
! CCCTTTCAAAAAGTAAAATA+TGG + chr3.1:75763495-75763514 MS.gene049356:intron 25.0%
! CTTAAACTTTGTTAGACATA+TGG - chr3.1:75760781-75760800 None:intergenic 25.0%
! GCATGTTTGTTTATTGTTAT+AGG + chr3.1:75764073-75764092 MS.gene049356:intron 25.0%
! GGTAAGAAAAAAAAATGAGA+CGG - chr3.1:75762709-75762728 None:intergenic 25.0%
! TATATGCATTTAGTGAGAAA+GGG - chr3.1:75762539-75762558 None:intergenic 25.0%
! TCAACTATGTACAAAAATTG+TGG + chr3.1:75760417-75760436 MS.gene049356:CDS 25.0%
! TCAGATTTCTTCACTTTATT+TGG + chr3.1:75763339-75763358 MS.gene049356:intron 25.0%
! TGAATGATTCAATAGACATA+TGG + chr3.1:75763979-75763998 MS.gene049356:intron 25.0%
! TGATTTATAATTCTTCTACC+AGG + chr3.1:75762821-75762840 MS.gene049356:intron 25.0%
! TTAAGAAAATTGAGGAATGA+GGG - chr3.1:75763218-75763237 None:intergenic 25.0%
! TTAAGAAACAGGAACTAAAA+TGG + chr3.1:75761904-75761923 MS.gene049356:intron 25.0%
! TTATATATCTAGTGCTATGA+TGG + chr3.1:75760755-75760774 MS.gene049356:intron 25.0%
! TTATATGCATTTAGTGAGAA+AGG - chr3.1:75762540-75762559 None:intergenic 25.0%
!! AATCTCAATCCTTATGATTT+TGG - chr3.1:75760728-75760747 None:intergenic 25.0%
!! ATATTGTTCCATGTTTTACT+AGG + chr3.1:75762580-75762599 MS.gene049356:intron 25.0%
!! ATCTCAATCCTTATGATTTT+GGG - chr3.1:75760727-75760746 None:intergenic 25.0%
!! CAGATTTCTTCACTTTATTT+GGG + chr3.1:75763340-75763359 MS.gene049356:intron 25.0%
!!! AGCTTATTTCTATGATTGAA+TGG + chr3.1:75761713-75761732 MS.gene049356:intron 25.0%
!!! AGTCAAAAGTACTCATTAAA+TGG + chr3.1:75760685-75760704 MS.gene049356:intron 25.0%
!!! ATCATTTAAAAATAACGGAC+GGG - chr3.1:75760095-75760114 None:intergenic 25.0%
!!! GTATTACATGTGTTTTTTGT+TGG + chr3.1:75763126-75763145 MS.gene049356:intron 25.0%
!!! GTCAAAAGTACTCATTAAAT+GGG + chr3.1:75760686-75760705 MS.gene049356:intron 25.0%
!!! TTTTTTTTCAACAGCATATC+TGG + chr3.1:75763448-75763467 MS.gene049356:intron 25.0%
AAAAATTGTGGAAACTGACA+TGG + chr3.1:75760429-75760448 MS.gene049356:CDS 30.0%
AAAACAGAATACATCAGGTA+GGG - chr3.1:75763381-75763400 None:intergenic 30.0%
AAAATTGTGGAAACTGACAT+GGG + chr3.1:75760430-75760449 MS.gene049356:CDS 30.0%
AAACTATTTACATGCTTCCA+TGG + chr3.1:75762464-75762483 MS.gene049356:intron 30.0%
AAACTTCTGTGAAACTCATA+TGG + chr3.1:75764237-75764256 MS.gene049356:intron 30.0%
AACGGAAACAAATGAAAATC+AGG + chr3.1:75761016-75761035 MS.gene049356:CDS 30.0%
AATCATCATTTGCATCTAGA+TGG - chr3.1:75763180-75763199 None:intergenic 30.0%
ACGATATTAAAGGACTTCTT+GGG + chr3.1:75761542-75761561 MS.gene049356:CDS 30.0%
AGAGTGATTGAAGTTAAAGA+TGG + chr3.1:75762918-75762937 MS.gene049356:CDS 30.0%
AGGCAAATCTTACAATTGAA+AGG + chr3.1:75761204-75761223 MS.gene049356:CDS 30.0%
CAGCAATATCATCTAATTTG+CGG - chr3.1:75761807-75761826 None:intergenic 30.0%
CATTCAATGAAAAATGGCTT+CGG - chr3.1:75763965-75763984 None:intergenic 30.0%
GCAAATCTTACAATTGAAAG+GGG + chr3.1:75761206-75761225 MS.gene049356:CDS 30.0%
GCATATAATGCAACACTATT+AGG + chr3.1:75762552-75762571 MS.gene049356:intron 30.0%
GGCAAATCTTACAATTGAAA+GGG + chr3.1:75761205-75761224 MS.gene049356:CDS 30.0%
GTATATGTGACAACAGAAAT+TGG + chr3.1:75760954-75760973 MS.gene049356:intron 30.0%
GTTAAGAAAATTGAGGAATG+AGG - chr3.1:75763219-75763238 None:intergenic 30.0%
GTTAATTGGGAAGTGAAAAA+GGG + chr3.1:75759283-75759302 MS.gene049356:CDS 30.0%
TAAAACAGAATACATCAGGT+AGG - chr3.1:75763382-75763401 None:intergenic 30.0%
TCAGTCTTTCATTTCATAAG+TGG + chr3.1:75763564-75763583 MS.gene049356:intron 30.0%
TCATCTAACAACAACAAATC+TGG - chr3.1:75760292-75760311 None:intergenic 30.0%
TCCTAATAAAAAGGGAAATG+TGG + chr3.1:75762121-75762140 MS.gene049356:intron 30.0%
TCTGTTGTCACATATACATA+AGG - chr3.1:75760951-75760970 None:intergenic 30.0%
TCTTTCATTTCATAAGTGGA+AGG + chr3.1:75763568-75763587 MS.gene049356:intron 30.0%
TGAAGATTATCTTAACAAGC+AGG + chr3.1:75760351-75760370 MS.gene049356:CDS 30.0%
TTCATTTGTTTCCGTTCAAA+TGG - chr3.1:75761012-75761031 None:intergenic 30.0%
TTCCCAGTATATTCTTTCAA+AGG + chr3.1:75760480-75760499 MS.gene049356:CDS 30.0%
TTGACTGAGAAAATGCTATT+TGG + chr3.1:75761381-75761400 MS.gene049356:intron 30.0%
TTTATAATTCTTCTACCAGG+AGG + chr3.1:75762824-75762843 MS.gene049356:intron 30.0%
TTTCATAAGTGGAAGGATAT+AGG + chr3.1:75763575-75763594 MS.gene049356:intron 30.0%
! ACCACATTTCCCTTTTTATT+AGG - chr3.1:75762125-75762144 None:intergenic 30.0%
! AGCAATATCATCTAATTTGC+GGG - chr3.1:75761806-75761825 None:intergenic 30.0%
! CAATTTTCTCAAATCAGTGT+CGG - chr3.1:75759868-75759887 None:intergenic 30.0%
! CTAGATGCAAATGATGATTT+TGG + chr3.1:75763181-75763200 MS.gene049356:intron 30.0%
! TAATTTGGTTCCTTTGTGAT+AGG + chr3.1:75763400-75763419 MS.gene049356:intron 30.0%
! TTTGAAGTGAAGAATCGATT+GGG - chr3.1:75759049-75759068 None:intergenic 30.0%
!! AAAAACTTACAAAGGTGTCA+CGG + chr3.1:75759249-75759268 MS.gene049356:CDS 30.0%
!! ATAACCAATGTTACTTTGCA+AGG + chr3.1:75760176-75760195 MS.gene049356:intron 30.0%
!! GATTCTTCTTCAACTTGTTT+TGG + chr3.1:75761976-75761995 MS.gene049356:intron 30.0%
!! TTGGATTTGGCTTTCAATTT+AGG - chr3.1:75764205-75764224 None:intergenic 30.0%
!!! GACACTTTGTTTTCAATTTC+AGG + chr3.1:75760264-75760283 MS.gene049356:intron 30.0%
!!! GGTTTTGAAAGAGGTTAATT+GGG + chr3.1:75759270-75759289 MS.gene049356:CDS 30.0%
!!! TGTGTTTTTTGTTGGATTCT+TGG + chr3.1:75763134-75763153 MS.gene049356:intron 30.0%
!!! TTTTGAAGTGAAGAATCGAT+TGG - chr3.1:75759050-75759069 None:intergenic 30.0%
AAAAGAAGCAACCAACCTAT+CGG - chr3.1:75759698-75759717 None:intergenic 35.0%
AAAGTTTCTCTATTGAGTGG+TGG + chr3.1:75761598-75761617 MS.gene049356:CDS 35.0%
AAATGAAGAATTGGAACCGA+TGG - chr3.1:75761409-75761428 None:intergenic 35.0%
AATCAATATTAGTCGGTCCT+TGG - chr3.1:75762806-75762825 None:intergenic 35.0%
ACCTCAAGCATTTCTTTAGA+AGG - chr3.1:75762686-75762705 None:intergenic 35.0%
ACTCAATTGTGTCAAGATCA+AGG - chr3.1:75760327-75760346 None:intergenic 35.0%
ATAATTTCCCTCAAATGTCC+TGG - chr3.1:75760461-75760480 None:intergenic 35.0%
ATATTCTTTCAAAGGCGACT+TGG + chr3.1:75760488-75760507 MS.gene049356:CDS 35.0%
ATCATGAGATACGGTGATAA+CGG - chr3.1:75762871-75762890 None:intergenic 35.0%
ATGGGACACAAAAAAGCTAA+TGG - chr3.1:75763002-75763021 None:intergenic 35.0%
CAAGCAAAACAGAAGTCTAA+AGG + chr3.1:75764377-75764396 MS.gene049356:CDS 35.0%
CAGAAATTGGAAAGACTTCT+TGG + chr3.1:75760967-75760986 MS.gene049356:intron 35.0%
CCAATTCTCCCAAAATCATA+AGG + chr3.1:75760716-75760735 MS.gene049356:intron 35.0%
CGTAAAGTTTCTCTATTGAG+TGG + chr3.1:75761595-75761614 MS.gene049356:CDS 35.0%
GAAGATCTGTTGTAACAGTT+AGG + chr3.1:75761061-75761080 MS.gene049356:CDS 35.0%
GAAGTTTACCTTTGACATCT+TGG - chr3.1:75764224-75764243 None:intergenic 35.0%
GACGATATTAAAGGACTTCT+TGG + chr3.1:75761541-75761560 MS.gene049356:CDS 35.0%
GCGGATAGTTAAGAAAATTG+AGG - chr3.1:75763226-75763245 None:intergenic 35.0%
GGAGAAAAAATTGCCATTCT+TGG + chr3.1:75761227-75761246 MS.gene049356:CDS 35.0%
GGTTAATTGGGAAGTGAAAA+AGG + chr3.1:75759282-75759301 MS.gene049356:CDS 35.0%
GTGCAAAGAATTCAAAGAGA+TGG + chr3.1:75764399-75764418 MS.gene049356:CDS 35.0%
GTTCATAATCTAAGTTGCAC+TGG + chr3.1:75763847-75763866 MS.gene049356:intron 35.0%
GTTTATGAGTGCTTTCAAAG+AGG + chr3.1:75759480-75759499 MS.gene049356:CDS 35.0%
TAACTATTTCGAGCAGAATC+AGG + chr3.1:75761349-75761368 MS.gene049356:CDS 35.0%
TAATGAAGTGAACAGTCTTG+TGG + chr3.1:75763523-75763542 MS.gene049356:intron 35.0%
TACACCTTGCAAAGTAACAT+TGG - chr3.1:75760183-75760202 None:intergenic 35.0%
TACCTTTGACATCTTGGATT+TGG - chr3.1:75764218-75764237 None:intergenic 35.0%
TAGTAGAGAAGCCATTTGAA+CGG + chr3.1:75760998-75761017 MS.gene049356:CDS 35.0%
TATATCAGCATTACAGCCTA+TGG - chr3.1:75760159-75760178 None:intergenic 35.0%
TCACGAAGTTACTATCAACA+TGG - chr3.1:75763935-75763954 None:intergenic 35.0%
TCAGGTAGGGACTAATAATT+TGG - chr3.1:75763368-75763387 None:intergenic 35.0%
TCCAAAACAAGTAGAGTTGA+TGG - chr3.1:75762638-75762657 None:intergenic 35.0%
TCGTGAGAAATGATAACCAT+CGG - chr3.1:75760382-75760401 None:intergenic 35.0%
TGATTCTGCTCGAAATAGTT+AGG - chr3.1:75761350-75761369 None:intergenic 35.0%
TGTTGTAACAGTTAGGAACT+TGG + chr3.1:75761068-75761087 MS.gene049356:CDS 35.0%
TTATCACCGTATCTCATGAT+CGG + chr3.1:75762871-75762890 MS.gene049356:CDS 35.0%
TTGAAGTGAAGAATCGATTG+GGG - chr3.1:75759048-75759067 None:intergenic 35.0%
TTGATCTTGACACAATTGAG+TGG + chr3.1:75760326-75760345 MS.gene049356:CDS 35.0%
! AACACTACTACCGCATTTTT+GGG - chr3.1:75760831-75760850 None:intergenic 35.0%
! ACAGTTAGGAACTTGGATTT+TGG + chr3.1:75761075-75761094 MS.gene049356:CDS 35.0%
! ACCATCAACTCTACTTGTTT+TGG + chr3.1:75762634-75762653 MS.gene049356:CDS 35.0%
! ACCTTCTAAAGAAATGCTTG+AGG + chr3.1:75762682-75762701 MS.gene049356:CDS 35.0%
! ATGACGGTTACCTAATTTTG+AGG + chr3.1:75763899-75763918 MS.gene049356:intron 35.0%
! ATGGCTATGATGATGTTAAG+AGG + chr3.1:75761923-75761942 MS.gene049356:intron 35.0%
! CGCCTTTGAAAGAATATACT+GGG - chr3.1:75760485-75760504 None:intergenic 35.0%
! GAGTTTGAATGTGAAAGTGT+TGG + chr3.1:75760231-75760250 MS.gene049356:intron 35.0%
! GTGAATGATTTGGAGTTGAT+GGG + chr3.1:75759556-75759575 MS.gene049356:CDS 35.0%
! TCAAGATCAAGGTGATTTGT+AGG - chr3.1:75760316-75760335 None:intergenic 35.0%
! TCGCCTTTGAAAGAATATAC+TGG - chr3.1:75760486-75760505 None:intergenic 35.0%
! TGACGGTTACCTAATTTTGA+GGG + chr3.1:75763900-75763919 MS.gene049356:intron 35.0%
! TGTGAATGATTTGGAGTTGA+TGG + chr3.1:75759555-75759574 MS.gene049356:CDS 35.0%
! TTGCCTTGTTGAAAAGTTTC+TGG - chr3.1:75761190-75761209 None:intergenic 35.0%
! TTGCTATTAAGCTCTCTTAG+TGG + chr3.1:75763758-75763777 MS.gene049356:intron 35.0%
! TTTAGTTGGTGTAAATGGTG+CGG + chr3.1:75759318-75759337 MS.gene049356:CDS 35.0%
!! AAAATGCTATTTGGTGCCAT+CGG + chr3.1:75761390-75761409 MS.gene049356:intron 35.0%
!! AAACAAGAGAGTTGATAAGC+AGG + chr3.1:75760560-75760579 MS.gene049356:CDS 35.0%
!! AAAGTACCGATCATGAGATA+CGG - chr3.1:75762880-75762899 None:intergenic 35.0%
!! ATGTGTTCCATTTTTCGTCA+AGG + chr3.1:75763872-75763891 MS.gene049356:intron 35.0%
!! CCTTATGATTTTGGGAGAAT+TGG - chr3.1:75760719-75760738 None:intergenic 35.0%
!! TGAATGATTTGGAGTTGATG+GGG + chr3.1:75759557-75759576 MS.gene049356:CDS 35.0%
!!! ACTTAGTTTTGACACTTGAG+AGG + chr3.1:75763691-75763710 MS.gene049356:intron 35.0%
!!! CGGTTTTGAAAGAGGTTAAT+TGG + chr3.1:75759269-75759288 MS.gene049356:CDS 35.0%
!!! CTTAGTTTTGACACTTGAGA+GGG + chr3.1:75763692-75763711 MS.gene049356:intron 35.0%
!!! GAAAATTGCGTTTTTGAGTC+AGG + chr3.1:75759420-75759439 MS.gene049356:CDS 35.0%
!!! GTTTTTGAGTCAGGAATTTG+AGG + chr3.1:75759429-75759448 MS.gene049356:CDS 35.0%
AAAACTCTGTATCCGATCCA+AGG + chr3.1:75762786-75762805 MS.gene049356:intron 40.0%
AAGGAAGAAGCAAAAGATGC+AGG + chr3.1:75764346-75764365 MS.gene049356:CDS 40.0%
ACACAAAAAAGCTAATGGCG+GGG - chr3.1:75762997-75763016 None:intergenic 40.0%
ACATCCATTTGGACCAAGAA+TGG - chr3.1:75761243-75761262 None:intergenic 40.0%
AGAGATGAGAGGTAAAACAG+AGG - chr3.1:75762210-75762229 None:intergenic 40.0%
AGATTGGACGTGTCTTCAAT+TGG + chr3.1:75759940-75759959 MS.gene049356:intron 40.0%
AGCCAAATCCAAGATGTCAA+AGG + chr3.1:75764213-75764232 MS.gene049356:CDS 40.0%
AGTGAAAAAGGGTGAGAAAG+TGG + chr3.1:75759294-75759313 MS.gene049356:CDS 40.0%
ATATAGAGAGAGAGAGAGAG+AGG - chr3.1:75762240-75762259 None:intergenic 40.0%
ATATTAGTCGGTCCTTGGAT+CGG - chr3.1:75762801-75762820 None:intergenic 40.0%
ATCAACCATCTCAATGTTCG+AGG - chr3.1:75761959-75761978 None:intergenic 40.0%
ATCCATACACCTGCATTCTT+TGG + chr3.1:75762026-75762045 MS.gene049356:intron 40.0%
ATGAAATGCCCAAAGAATGC+AGG - chr3.1:75762038-75762057 None:intergenic 40.0%
ATGAACAAGATCGCCAAGAA+GGG - chr3.1:75763255-75763274 None:intergenic 40.0%
ATTCTTGGTCCAAATGGATG+TGG + chr3.1:75761242-75761261 MS.gene049356:CDS 40.0%
ATTGCCATTCTTGGTCCAAA+TGG + chr3.1:75761236-75761255 MS.gene049356:CDS 40.0%
ATTGGAAAGACTTCTTGGAG+AGG + chr3.1:75760972-75760991 MS.gene049356:CDS 40.0%
CAACATGTTAGTGTCGTGAT+CGG - chr3.1:75759842-75759861 None:intergenic 40.0%
CATACAGCCTTGACGAAAAA+TGG - chr3.1:75763882-75763901 None:intergenic 40.0%
CTGTGAAACTCATATGGATG+AGG + chr3.1:75764243-75764262 MS.gene049356:intron 40.0%
GACACAAAAAAGCTAATGGC+GGG - chr3.1:75762998-75763017 None:intergenic 40.0%
GAGGCAATAAATGAGTACGA+GGG + chr3.1:75762843-75762862 MS.gene049356:CDS 40.0%
GAGTGCTTTCAAAGAGGAAA+TGG + chr3.1:75759486-75759505 MS.gene049356:CDS 40.0%
GATAGTTGAAGCAGGTTAAC+TGG + chr3.1:75763058-75763077 MS.gene049356:intron 40.0%
GATGAGGATTATTGCAGGTT+TGG + chr3.1:75759354-75759373 MS.gene049356:CDS 40.0%
GATTCAGAGATAGTTGAAGC+AGG + chr3.1:75763050-75763069 MS.gene049356:intron 40.0%
GGACACAAAAAAGCTAATGG+CGG - chr3.1:75762999-75763018 None:intergenic 40.0%
GGTATATCCAAGTGATTCGT+TGG - chr3.1:75762665-75762684 None:intergenic 40.0%
GTGAAAAAGGGTGAGAAAGT+GGG + chr3.1:75759295-75759314 MS.gene049356:CDS 40.0%
TACAGCCTATGGTTAACCAT+AGG - chr3.1:75760148-75760167 None:intergenic 40.0%
TATAGAGAGAGAGAGAGAGA+GGG - chr3.1:75762239-75762258 None:intergenic 40.0%
TATTAAGCTCTCTTAGTGGC+AGG + chr3.1:75763762-75763781 MS.gene049356:intron 40.0%
TCCATACACCTGCATTCTTT+GGG + chr3.1:75762027-75762046 MS.gene049356:intron 40.0%
TGAAACACAGTATGCTGCAT+GGG + chr3.1:75760513-75760532 MS.gene049356:CDS 40.0%
TGAATCGAGAATGAATGCTC+CGG - chr3.1:75758954-75758973 None:intergenic 40.0%
TGAGGGTTCTGTGAATGATT+TGG + chr3.1:75759546-75759565 MS.gene049356:CDS 40.0%
TGCTTTCAAAGAGGAAATGG+AGG + chr3.1:75759489-75759508 MS.gene049356:CDS 40.0%
TGGAGGAGTGACGATATTAA+AGG + chr3.1:75761532-75761551 MS.gene049356:CDS 40.0%
TGGTGGTATTGCAAATTGCA+TGG + chr3.1:75759973-75759992 MS.gene049356:intron 40.0%
TTAATCACATTCCCCGAATC+CGG - chr3.1:75759385-75759404 None:intergenic 40.0%
TTGAAACACAGTATGCTGCA+TGG + chr3.1:75760512-75760531 MS.gene049356:CDS 40.0%
TTGATTTAGTCAACAGGCTG+AGG + chr3.1:75761456-75761475 MS.gene049356:intron 40.0%
! AGACATATGGTGATGCTGTA+AGG + chr3.1:75763992-75764011 MS.gene049356:intron 40.0%
! AGTGTTAGTGTTGAAGGTGT+TGG - chr3.1:75759023-75759042 None:intergenic 40.0%
! ATCAATAAAGGGCACACCTT+AGG + chr3.1:75760117-75760136 MS.gene049356:intron 40.0%
! CAACACTACTACCGCATTTT+TGG - chr3.1:75760832-75760851 None:intergenic 40.0%
! GAAATTGGAGAAAGTGCAGA+AGG + chr3.1:75759519-75759538 MS.gene049356:CDS 40.0%
! GACATATGGTGATGCTGTAA+GGG + chr3.1:75763993-75764012 MS.gene049356:intron 40.0%
! GTGCCAGAAACTTTTCAACA+AGG + chr3.1:75761184-75761203 MS.gene049356:intron 40.0%
! GTGGGTTTAGTTGGTGTAAA+TGG + chr3.1:75759313-75759332 MS.gene049356:CDS 40.0%
! GTTCCATGTTTTACTAGGCA+CGG + chr3.1:75762585-75762604 MS.gene049356:intron 40.0%
! TCGTTCATCGACTGAAGTAT+CGG - chr3.1:75759158-75759177 None:intergenic 40.0%
! TCTTGGCAAGATTTTGCTTC+AGG + chr3.1:75759744-75759763 MS.gene049356:CDS 40.0%
! TTAGTTGGTGTAAATGGTGC+GGG + chr3.1:75759319-75759338 MS.gene049356:CDS 40.0%
! TTGGTTGCTTCTTTTAGTGG+TGG + chr3.1:75759703-75759722 MS.gene049356:CDS 40.0%
! TTTTCGTCAAGGCTGTATGA+CGG + chr3.1:75763883-75763902 MS.gene049356:intron 40.0%
!! AAGGGAAATGTGGTGCTATT+AGG + chr3.1:75762131-75762150 MS.gene049356:intron 40.0%
!! AGAGAGTTGATAAGCAGGTT+AGG + chr3.1:75760565-75760584 MS.gene049356:CDS 40.0%
!! AGGTTGGTTGCTTCTTTTAG+TGG + chr3.1:75759700-75759719 MS.gene049356:CDS 40.0%
!! CTTCAATTGGAAGTGTCTAG+TGG + chr3.1:75759953-75759972 MS.gene049356:intron 40.0%
!! CTTCTGTTTTGCTTGCTGAA+AGG - chr3.1:75764372-75764391 None:intergenic 40.0%
!! GCTGACTTGATTTAGTCAAC+AGG + chr3.1:75761450-75761469 MS.gene049356:intron 40.0%
!! GTGTTAGTGTTGAAGGTGTT+GGG - chr3.1:75759022-75759041 None:intergenic 40.0%
!! TTGCTTCTTTTAGTGGTGGA+TGG + chr3.1:75759707-75759726 MS.gene049356:CDS 40.0%
!!! GAACTTGGATTTTGGCTTTG+AGG + chr3.1:75761083-75761102 MS.gene049356:CDS 40.0%
!!! GCTGGCTTTTTGCAAATTCA+TGG + chr3.1:75762607-75762626 MS.gene049356:CDS 40.0%
AAACTGACATGGGTGTATCC+AGG + chr3.1:75760440-75760459 MS.gene049356:CDS 45.0%
AAAGAGGAAATGGAGGTTGC+GGG + chr3.1:75759496-75759515 MS.gene049356:CDS 45.0%
ACCATCTCAATGTTCGAGGT+TGG - chr3.1:75761955-75761974 None:intergenic 45.0%
ACGCAGATGAGGATTATTGC+AGG + chr3.1:75759349-75759368 MS.gene049356:CDS 45.0%
AGCTACTGAAGTTTCGTCCA+CGG - chr3.1:75759110-75759129 None:intergenic 45.0%
AGGATAACTTCACCGCTGAT+TGG - chr3.1:75761308-75761327 None:intergenic 45.0%
AGTTAAAGATGGCACTGTGC+AGG + chr3.1:75762929-75762948 MS.gene049356:CDS 45.0%
ATCAGCGGTGAAGTTATCCT+TGG + chr3.1:75761308-75761327 MS.gene049356:CDS 45.0%
ATCAGGCTGAGAAAGAAGCA+AGG + chr3.1:75764327-75764346 MS.gene049356:intron 45.0%
ATTAGGTTCTCACCATGGCA+GGG + chr3.1:75762148-75762167 MS.gene049356:intron 45.0%
CAAAGAGGAAATGGAGGTTG+CGG + chr3.1:75759495-75759514 MS.gene049356:CDS 45.0%
CATGCTTCCATGGTACTCTT+CGG + chr3.1:75762474-75762493 MS.gene049356:intron 45.0%
CGTACTCATTTATTGCCTCC+TGG - chr3.1:75762842-75762861 None:intergenic 45.0%
CTGCACCTATGGTTAACCAT+AGG + chr3.1:75760140-75760159 MS.gene049356:intron 45.0%
GAGAGCTTAATAGCAACAGC+TGG - chr3.1:75763754-75763773 None:intergenic 45.0%
GAGGATTATTGCAGGTTTGG+AGG + chr3.1:75759357-75759376 MS.gene049356:CDS 45.0%
GATAGCAAATACGCCTGTGA+GGG + chr3.1:75763625-75763644 MS.gene049356:intron 45.0%
GATGAACAAGATCGCCAAGA+AGG - chr3.1:75763256-75763275 None:intergenic 45.0%
GATGAGATGAGTGTGGGATA+GGG - chr3.1:75758993-75759012 None:intergenic 45.0%
GCAATACATTATGCTCCCCA+AGG - chr3.1:75761328-75761347 None:intergenic 45.0%
GCGGGTAAAGAAGCAATTCT+CGG - chr3.1:75761788-75761807 None:intergenic 45.0%
GGAGAAGAATCTTGATGCCA+GGG + chr3.1:75764138-75764157 MS.gene049356:CDS 45.0%
GGAGGCAATAAATGAGTACG+AGG + chr3.1:75762842-75762861 MS.gene049356:intron 45.0%
GGATGAACCAACGAATCACT+TGG + chr3.1:75762655-75762674 MS.gene049356:CDS 45.0%
GGCACTTGATCTGGAAAAGA+CGG + chr3.1:75761477-75761496 MS.gene049356:CDS 45.0%
GGTGTATCCAGGACATTTGA+GGG + chr3.1:75760451-75760470 MS.gene049356:CDS 45.0%
GGTTTAGAGAAGCCAATCAG+CGG + chr3.1:75761293-75761312 MS.gene049356:CDS 45.0%
GTACTCTTGCCACATCCATT+TGG - chr3.1:75761254-75761273 None:intergenic 45.0%
GTCGAGTCTGTATTGGAGAT+TGG + chr3.1:75759924-75759943 MS.gene049356:intron 45.0%
TATTAGGTTCTCACCATGGC+AGG + chr3.1:75762147-75762166 MS.gene049356:intron 45.0%
TATTGCAGGTTTGGAGGAAC+CGG + chr3.1:75759363-75759382 MS.gene049356:CDS 45.0%
TCAGCGGTGAAGTTATCCTT+GGG + chr3.1:75761309-75761328 MS.gene049356:CDS 45.0%
TCCAACCTCGAACATTGAGA+TGG + chr3.1:75761951-75761970 MS.gene049356:intron 45.0%
TCTACACCAAAACCAAGCTC+AGG - chr3.1:75759670-75759689 None:intergenic 45.0%
TCTCTTAGTGGCAGGATTCA+GGG + chr3.1:75763770-75763789 MS.gene049356:intron 45.0%
TGAACAAGATCGCCAAGAAG+GGG - chr3.1:75763254-75763273 None:intergenic 45.0%
TGATAGCAAATACGCCTGTG+AGG + chr3.1:75763624-75763643 MS.gene049356:intron 45.0%
TGGAGAAGAATCTTGATGCC+AGG + chr3.1:75764137-75764156 MS.gene049356:CDS 45.0%
TGTAGAGGATTCCGATAGGT+TGG + chr3.1:75759684-75759703 MS.gene049356:CDS 45.0%
TTAACCATAGGTGCAGCCTA+AGG - chr3.1:75760136-75760155 None:intergenic 45.0%
TTGATAAGCAGGTTAGGTGC+CGG + chr3.1:75760571-75760590 MS.gene049356:CDS 45.0%
TTGGTGTAGAGGATTCCGAT+AGG + chr3.1:75759680-75759699 MS.gene049356:CDS 45.0%
TTTGGCGATGAGATGAGTGT+GGG - chr3.1:75758999-75759018 None:intergenic 45.0%
! AAAAAAGCTAATGGCGGGGA+GGG - chr3.1:75762993-75763012 None:intergenic 45.0%
! AATTTGAGGTTTCGCCGAGT+AGG + chr3.1:75759443-75759462 MS.gene049356:CDS 45.0%
! GACTGCTGAGAAGGTATATG+TGG + chr3.1:75760615-75760634 MS.gene049356:intron 45.0%
! GGGGTTAGTGTTAGTGTTGA+AGG - chr3.1:75759029-75759048 None:intergenic 45.0%
! GGTGAGAAAGTGGGTTTAGT+TGG + chr3.1:75759304-75759323 MS.gene049356:CDS 45.0%
! GTGCTATTAGGTTCTCACCA+TGG + chr3.1:75762143-75762162 MS.gene049356:intron 45.0%
! TAGTCCTTTTGATCCCTCAC+AGG - chr3.1:75763641-75763660 None:intergenic 45.0%
! TCTATTGAGTGGTGGTGAGA+AGG + chr3.1:75761606-75761625 MS.gene049356:CDS 45.0%
! TGTCAGTGTCGAGTCTGTAT+TGG + chr3.1:75759917-75759936 MS.gene049356:intron 45.0%
! TTGATGCCTGAGCTTGGTTT+TGG + chr3.1:75759661-75759680 MS.gene049356:CDS 45.0%
!! AGTAAGTTGATGCCTGAGCT+TGG + chr3.1:75759655-75759674 MS.gene049356:CDS 45.0%
!! AGTGTTGAAGGTGTTGGGTT+TGG - chr3.1:75759017-75759036 None:intergenic 45.0%
!! ATGATTTGGAGTTGATGGGG+AGG + chr3.1:75759560-75759579 MS.gene049356:CDS 45.0%
!! CAATTGGAAGTGTCTAGTGG+TGG + chr3.1:75759956-75759975 MS.gene049356:intron 45.0%
!! GTTGTATCCGAAGAGTACCA+TGG - chr3.1:75762484-75762503 None:intergenic 45.0%
!!! AGGTGTCACGGTTTTGAAAG+AGG + chr3.1:75759261-75759280 MS.gene049356:CDS 45.0%
!!! TGAGCTTGGTTTTGGTGTAG+AGG + chr3.1:75759669-75759688 MS.gene049356:CDS 45.0%
!!! TTTTTTTTTACTAAAATTAA+GGG + chr3.1:75763727-75763746 MS.gene049356:intron 5.0%
!!! TTTTTTTTTTACTAAAATTA+AGG + chr3.1:75763726-75763745 MS.gene049356:intron 5.0%
AAAATCAGGTTCCCTGTGCG+TGG + chr3.1:75761030-75761049 MS.gene049356:CDS 50.0%
AAGAGGAAATGGAGGTTGCG+GGG + chr3.1:75759497-75759516 MS.gene049356:CDS 50.0%
AATGGAGGTTGCGGGGAAAT+TGG + chr3.1:75759504-75759523 MS.gene049356:CDS 50.0%
ACGAGCTCAGGCTGTGAATT+TGG + chr3.1:75759612-75759631 MS.gene049356:CDS 50.0%
ACTTCAGTCGATGAACGACG+CGG + chr3.1:75759160-75759179 MS.gene049356:CDS 50.0%
AGACGAAACGCTTGAAGCTC+CGG - chr3.1:75759206-75759225 None:intergenic 50.0%
AGGTTTGGAGGAACCGGATT+CGG + chr3.1:75759369-75759388 MS.gene049356:CDS 50.0%
CAGCCGTGCCTAGTAAAACA+TGG - chr3.1:75762591-75762610 None:intergenic 50.0%
CAGCGGTGAAGTTATCCTTG+GGG + chr3.1:75761310-75761329 MS.gene049356:CDS 50.0%
CGATGAGATGAGTGTGGGAT+AGG - chr3.1:75758994-75759013 None:intergenic 50.0%
CGTTTCGTCTGGTGTGAAGT+TGG + chr3.1:75759216-75759235 MS.gene049356:CDS 50.0%
CTCTCTTAGTGGCAGGATTC+AGG + chr3.1:75763769-75763788 MS.gene049356:intron 50.0%
GAACAAGATCGCCAAGAAGG+GGG - chr3.1:75763253-75763272 None:intergenic 50.0%
GCCCAAAGAATGCAGGTGTA+TGG - chr3.1:75762031-75762050 None:intergenic 50.0%
GGAAAAAGAGCTTGAACGCC+AGG + chr3.1:75764159-75764178 MS.gene049356:CDS 50.0%
GGGTGTATCCAGGACATTTG+AGG + chr3.1:75760450-75760469 MS.gene049356:CDS 50.0%
GTTTGGCGATGAGATGAGTG+TGG - chr3.1:75759000-75759019 None:intergenic 50.0%
TAACAAGCAGGATGTGCCGA+TGG + chr3.1:75760363-75760382 MS.gene049356:CDS 50.0%
TACGCCTGTGAGGGATCAAA+AGG + chr3.1:75763634-75763653 MS.gene049356:intron 50.0%
TACTGAAGTTTCGTCCACGG+CGG - chr3.1:75759107-75759126 None:intergenic 50.0%
TAGTGGCAGGATTCAGGGAA+GGG + chr3.1:75763775-75763794 MS.gene049356:intron 50.0%
TGGCAGATGAGGATGTGTCT+TGG + chr3.1:75759727-75759746 MS.gene049356:CDS 50.0%
TTAGTGGCAGGATTCAGGGA+AGG + chr3.1:75763774-75763793 MS.gene049356:intron 50.0%
TTCTCACCATGGCAGGGTTT+GGG + chr3.1:75762154-75762173 MS.gene049356:intron 50.0%
TTTGCTTCAGAGACGAGCTC+AGG + chr3.1:75759600-75759619 MS.gene049356:CDS 50.0%
! AAAAAGCTAATGGCGGGGAG+GGG - chr3.1:75762992-75763011 None:intergenic 50.0%
! CAAAAAAGCTAATGGCGGGG+AGG - chr3.1:75762994-75763013 None:intergenic 50.0%
! CATGTTTTACTAGGCACGGC+TGG + chr3.1:75762589-75762608 MS.gene049356:intron 50.0%
! GCGTTCAAGCTCTTTTTCCC+TGG - chr3.1:75764158-75764177 None:intergenic 50.0%
!! AAAGTGCAGAAGGCGCTTGA+GGG + chr3.1:75759529-75759548 MS.gene049356:CDS 50.0%
!! TTAGTGGTGGATGGCAGATG+AGG + chr3.1:75759716-75759735 MS.gene049356:CDS 50.0%
ATCGTCACTCCTCCAGTCCT+CGG - chr3.1:75761527-75761546 None:intergenic 55.0%
CACACCTTAGGCTGCACCTA+TGG + chr3.1:75760129-75760148 MS.gene049356:intron 55.0%
CCTTCTCAGCAGTCGAAGCA+CGG - chr3.1:75760609-75760628 None:intergenic 55.0%
CGAGAATGAATGCTCCGGTG+AGG - chr3.1:75758949-75758968 None:intergenic 55.0%
CTTTGTCGTCAAGCTCAGCC+TGG - chr3.1:75764180-75764199 None:intergenic 55.0%
GACGGTGCTTGAGACAGTAG+AGG + chr3.1:75761495-75761514 MS.gene049356:CDS 55.0%
GAGGGAGAGAGAGAGATGAG+AGG - chr3.1:75762221-75762240 None:intergenic 55.0%
GGAGCTTCAAGCGTTTCGTC+TGG + chr3.1:75759205-75759224 MS.gene049356:CDS 55.0%
GGCACTGTGCAGGATTATGC+TGG + chr3.1:75762939-75762958 MS.gene049356:CDS 55.0%
GGTTTGGAGGAACCGGATTC+GGG + chr3.1:75759370-75759389 MS.gene049356:CDS 55.0%
GTTCTCACCATGGCAGGGTT+TGG + chr3.1:75762153-75762172 MS.gene049356:intron 55.0%
GTTTGGAGGAACCGGATTCG+GGG + chr3.1:75759371-75759390 MS.gene049356:CDS 55.0%
TATCCGCTTTGCCCCCTTCT+TGG + chr3.1:75763239-75763258 MS.gene049356:intron 55.0%
TCTCACCATGGCAGGGTTTG+GGG + chr3.1:75762155-75762174 MS.gene049356:intron 55.0%
TCTTCCCTCACCGTCCTACT+CGG - chr3.1:75759460-75759479 None:intergenic 55.0%
TGAGGTTTCGCCGAGTAGGA+CGG + chr3.1:75759447-75759466 MS.gene049356:CDS 55.0%
TTCCACTGCTTCCACGCACA+GGG - chr3.1:75761044-75761063 None:intergenic 55.0%
! AAAAGCTAATGGCGGGGAGG+GGG - chr3.1:75762991-75763010 None:intergenic 55.0%
! ACAGGCTGAGGCACTTGATC+TGG + chr3.1:75761468-75761487 MS.gene049356:intron 55.0%
!! GAAAGTGCAGAAGGCGCTTG+AGG + chr3.1:75759528-75759547 MS.gene049356:CDS 55.0%
!! TTAGGTGCCGGAGCAAGTTC+TGG + chr3.1:75760583-75760602 MS.gene049356:CDS 55.0%
!!! GGAGTTGATGGGGAGGCTTT+TGG + chr3.1:75759567-75759586 MS.gene049356:CDS 55.0%
ACCATGGCAGGGTTTGGGGA+AGG + chr3.1:75762159-75762178 MS.gene049356:intron 60.0%
AGTTTCGTCCACGGCGGCTA+CGG - chr3.1:75759101-75759120 None:intergenic 60.0%
CCATGGCAGGGTTTGGGGAA+GGG + chr3.1:75762160-75762179 MS.gene049356:intron 60.0%
CCGTGCTTCGACTGCTGAGA+AGG + chr3.1:75760606-75760625 MS.gene049356:CDS 60.0%
CGGGAAAGACGACGCAGATG+AGG + chr3.1:75759338-75759357 MS.gene049356:CDS 60.0%
CTTCCACTGCTTCCACGCAC+AGG - chr3.1:75761045-75761064 None:intergenic 60.0%
GACAGTAGAGGAAGCTGCCG+AGG + chr3.1:75761507-75761526 MS.gene049356:CDS 60.0%
GGCAGGATTCAGGGAAGGGT+GGG + chr3.1:75763779-75763798 MS.gene049356:intron 60.0%
TAGAGGAAGCTGCCGAGGAC+TGG + chr3.1:75761512-75761531 MS.gene049356:CDS 60.0%
TCGCCAAGAAGGGGGCAAAG+CGG - chr3.1:75763245-75763264 None:intergenic 60.0%
TGAATGCTCCGGTGAGGTCG+AGG - chr3.1:75758943-75758962 None:intergenic 60.0%
TGAGTGTGGGATAGGGTGCG+TGG - chr3.1:75758986-75759005 None:intergenic 60.0%
TGGCAGGATTCAGGGAAGGG+TGG + chr3.1:75763778-75763797 MS.gene049356:intron 60.0%
TGTGGGATAGGGTGCGTGGA+AGG - chr3.1:75758982-75759001 None:intergenic 60.0%
TTCCCTGTGCGTGGAAGCAG+TGG + chr3.1:75761039-75761058 MS.gene049356:CDS 60.0%
TTCGCCGAGTAGGACGGTGA+GGG + chr3.1:75759453-75759472 MS.gene049356:CDS 60.0%
TTTCGCCGAGTAGGACGGTG+AGG + chr3.1:75759452-75759471 MS.gene049356:CDS 60.0%
! AAAGCTAATGGCGGGGAGGG+GGG - chr3.1:75762990-75763009 None:intergenic 60.0%
! AGCACGGCCAGAACTTGCTC+CGG - chr3.1:75760593-75760612 None:intergenic 60.0%
!! GTCGAGGTGGTGGAGCTTTG+AGG - chr3.1:75758927-75758946 None:intergenic 60.0%
AGGAAGCTGCCGAGGACTGG+AGG + chr3.1:75761515-75761534 MS.gene049356:CDS 65.0%
ATGCTCCGGTGAGGTCGAGG+TGG - chr3.1:75758940-75758959 None:intergenic 65.0%
CCCTTCCCCAAACCCTGCCA+TGG - chr3.1:75762163-75762182 None:intergenic 65.0%
CTCCACCACCTCGACCTCAC+CGG + chr3.1:75758932-75758951 MS.gene049356:CDS 65.0%
TTTATCCGCCGTAGCCGCCG+TGG + chr3.1:75759090-75759109 MS.gene049356:CDS 65.0%
! AAGCTAATGGCGGGGAGGGG+GGG - chr3.1:75762989-75763008 None:intergenic 65.0%
CTCCGGTGAGGTCGAGGTGG+TGG - chr3.1:75758937-75758956 None:intergenic 70.0%
TTCGTCCACGGCGGCTACGG+CGG - chr3.1:75759098-75759117 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 75758914 75764427 75758914 ID=MS.gene049356
chr3.1 mRNA 75758914 75764427 75758914 ID=MS.gene049356.t1;Parent=MS.gene049356
chr3.1 exon 75758914 75759765 75758914 ID=MS.gene049356.t1.exon1;Parent=MS.gene049356.t1
chr3.1 CDS 75758914 75759765 75758914 ID=cds.MS.gene049356.t1;Parent=MS.gene049356.t1
chr3.1 exon 75760286 75760627 75760286 ID=MS.gene049356.t1.exon2;Parent=MS.gene049356.t1
chr3.1 CDS 75760286 75760627 75760286 ID=cds.MS.gene049356.t1;Parent=MS.gene049356.t1
chr3.1 exon 75760970 75761110 75760970 ID=MS.gene049356.t1.exon3;Parent=MS.gene049356.t1
chr3.1 CDS 75760970 75761110 75760970 ID=cds.MS.gene049356.t1;Parent=MS.gene049356.t1
chr3.1 exon 75761191 75761370 75761191 ID=MS.gene049356.t1.exon4;Parent=MS.gene049356.t1
chr3.1 CDS 75761191 75761370 75761191 ID=cds.MS.gene049356.t1;Parent=MS.gene049356.t1
chr3.1 exon 75761472 75761627 75761472 ID=MS.gene049356.t1.exon5;Parent=MS.gene049356.t1
chr3.1 CDS 75761472 75761627 75761472 ID=cds.MS.gene049356.t1;Parent=MS.gene049356.t1
chr3.1 exon 75762602 75762703 75762602 ID=MS.gene049356.t1.exon6;Parent=MS.gene049356.t1
chr3.1 CDS 75762602 75762703 75762602 ID=cds.MS.gene049356.t1;Parent=MS.gene049356.t1
chr3.1 exon 75762843 75762971 75762843 ID=MS.gene049356.t1.exon7;Parent=MS.gene049356.t1
chr3.1 CDS 75762843 75762971 75762843 ID=cds.MS.gene049356.t1;Parent=MS.gene049356.t1
chr3.1 exon 75764130 75764234 75764130 ID=MS.gene049356.t1.exon8;Parent=MS.gene049356.t1
chr3.1 CDS 75764130 75764234 75764130 ID=cds.MS.gene049356.t1;Parent=MS.gene049356.t1
chr3.1 exon 75764332 75764427 75764332 ID=MS.gene049356.t1.exon9;Parent=MS.gene049356.t1
chr3.1 CDS 75764332 75764427 75764332 ID=cds.MS.gene049356.t1;Parent=MS.gene049356.t1
Gene Sequence

>MS.gene049356

ATGGAGTTGGCCTCAAAGCTCCACCACCTCGACCTCACCGGAGCATTCATTCTCGATTCACGACGCCTTCCACGCACCCTATCCCACACTCATCTCATCGCCAAACCCAACACCTTCAACACTAACACTAACCCCAATCGATTCTTCACTTCAAAAAAACTCAATCATACTTCACGTTTATCCGCCGTAGCCGCCGTGGACGAAACTTCAGTAGCTGAAGACGATATCGAGTCACTATTTACCGATACTTCAGTCGATGAACGACGCGGTAACAATAAACAATCTAACACCGGAGCTTCAAGCGTTTCGTCTGGTGTGAAGTTGGAAAATATTAGAAAAACTTACAAAGGTGTCACGGTTTTGAAAGAGGTTAATTGGGAAGTGAAAAAGGGTGAGAAAGTGGGTTTAGTTGGTGTAAATGGTGCGGGAAAGACGACGCAGATGAGGATTATTGCAGGTTTGGAGGAACCGGATTCGGGGAATGTGATTAAAGCGAAACCAAATATGAAAATTGCGTTTTTGAGTCAGGAATTTGAGGTTTCGCCGAGTAGGACGGTGAGGGAAGAGTTTATGAGTGCTTTCAAAGAGGAAATGGAGGTTGCGGGGAAATTGGAGAAAGTGCAGAAGGCGCTTGAGGGTTCTGTGAATGATTTGGAGTTGATGGGGAGGCTTTTGGATGAGTTTGATTTGCTTCAGAGACGAGCTCAGGCTGTGAATTTGGATGTTGTTGATTCGAAGATAAGTAAGTTGATGCCTGAGCTTGGTTTTGGTGTAGAGGATTCCGATAGGTTGGTTGCTTCTTTTAGTGGTGGATGGCAGATGAGGATGTGTCTTGGCAAGATTTTGCTTCAGGTATATTGCACAGCATGCTGATATTATAGTATATTGTGTATGTGTATAGGACTATGAACATGAAATGCAGACACCGATCACGACACTAACATGTTGATACCGACACTGATTTGAGAAAATTGAATAATTGAATGAAAGTACATTGTTCATGTGTCAGTGTCGAGTCTGTATTGGAGATTGGACGTGTCTTCAATTGGAAGTGTCTAGTGGTGGTATTGCAAATTGCATGGTGATTGTGTGTTCCCTTTTAGACAACAACTAGATTTTTCAACAGAAAAAAAAAGAATACAAATGATTATGGTTAGTAATTAGGAAGATAATCTTTACCCGTCCGTTATTTTTAAATGATAAATCAATAAAGGGCACACCTTAGGCTGCACCTATGGTTAACCATAGGCTGTAATGCTGATATAACCAATGTTACTTTGCAAGGTGTATATTGATGAATCGTTGATAATGTTATGTGAGTTTGAATGTGAAAGTGTTGGTGATATGAATGACACTTTGTTTTCAATTTCAGGAACCAGATTTGTTGTTGTTAGATGAGCCTACAAATCACCTTGATCTTGACACAATTGAGTGGCTTGAAGATTATCTTAACAAGCAGGATGTGCCGATGGTTATCATTTCTCACGACAGAGCTTTTCTCGATCAACTATGTACAAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATTTGAGGGAAATTATTCCCAGTATATTCTTTCAAAGGCGACTTGGATTGAAACACAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAACAAACAAGAGAGTTGATAAGCAGGTTAGGTGCCGGAGCAAGTTCTGGCCGTGCTTCGACTGCTGAGAAGGTATATGTGGTCAACTATTTAATTTAGATATAACATTACTTGTACAAAATGTTAACAAGTCAAAAGTACTCATTAAATGGGTCAAGAACCAATTCTCCCAAAATCATAAGGATTGAGATTCATGAATTTATATATCTAGTGCTATGATGGCCATATGTCTAACAAAGTTTAAGTGACCTTAATATTAGTCACTTAAATAACCCAAAAATGCGGTAGTAGTGTTGATTACCGAAATAGTTGTAAATTGCAATGCATCCTTCCGTATTGTAAAAATTAATGTTTTGTTGTTCACTTCCTATGTTATTTACTTAAAAGAATTTCCTTATGTATATGTGACAACAGAAATTGGAAAGACTTCTTGGAGAGGAACTAGTAGAGAAGCCATTTGAACGGAAACAAATGAAAATCAGGTTCCCTGTGCGTGGAAGCAGTGGAAGATCTGTTGTAACAGTTAGGAACTTGGATTTTGGCTTTGAGGATAAAGTGAGTTAGCGTAATATTTTTATGTAAAAAGTAGTGTTAAAATGTTAAAGAAATCATCTGATCACGTTTTTCTGTGCCAGAAACTTTTCAACAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTCTTGGTCCAAATGGATGTGGCAAGAGTACTTTACTAAAATTGATTATGGGTTTAGAGAAGCCAATCAGCGGTGAAGTTATCCTTGGGGAGCATAATGTATTGCCTAACTATTTCGAGCAGAATCAGGTTCACTACTTTGACTGAGAAAATGCTATTTGGTGCCATCGGTTCCAATTCTTCATTTCAAAACTTTTATATTTTTAGTGCTGACTTGATTTAGTCAACAGGCTGAGGCACTTGATCTGGAAAAGACGGTGCTTGAGACAGTAGAGGAAGCTGCCGAGGACTGGAGGAGTGACGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGATCGTAAAGTTTCTCTATTGAGTGGTGGTGAGAAGGTAATTAATTAATTTCTAGATTTGTGTTTTCTTTTTCAGTTGACATTCAGTTAGCATTTGCGAACAAATGTAACATTCAAGTTCTAGCTTATTTCTATGATTGAATGGTTCGTTTTTTCAACATCAAGTTTGTAATTCATTATGTAATTAGTTTTAACCGAGAATTGCTTCTTTACCCGCAAATTAGATGATATTGCTGTTAAATGCCTTAGACATTTTGAAAATCTTTTTTGCTCTCCTTTGAAGTATCTTTAAAATGACCGTCTTTAAAGAAATTTAAGAAACAGGAACTAAAATGGCTATGATGATGTTAAGAGGCATAATCCAACCTCGAACATTGAGATGGTTGATTCTTCTTCAACTTGTTTTGGTAAATGTATTTGACAATTTTGGGAGATATCCATACACCTGCATTCTTTGGGCATTTCATGTATTGTAGAGTCAAGTATAATATACACACACAAATTCTTTAACTTCATTAGACATGATTTATTCCTAATAAAAAGGGAAATGTGGTGCTATTAGGTTCTCACCATGGCAGGGTTTGGGGAAGGGTCAAACTCATTGTGTTATAAAGCTCCTCTGTTTTACCTCTCATCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCTATATGTATATATATATATCTATATGTGTATATATATATATATCTATATGTGTATATATATATATCTATATGTGTATATATATCTATATATATATATATATATATATATATATATATATATATATATATCTATGTATGTATATATAATTAAACTATTTACATGCTTCCATGGTACTCTTCGGATACAACAATAGCTTTGCTAGTTTTATTGAAATGTTCTTCCCTTTCTCACTAAATGCATATAATGCAACACTATTAGGGGTTTATATTGTTCCATGTTTTACTAGGCACGGCTGGCTTTTTGCAAATTCATGGTAAAACCATCAACTCTACTTGTTTTGGATGAACCAACGAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGTCCGTCTCATTTTTTTTTCTTACCTTTATCTGTATTTAATGTTCACTGTCACCCATCAGCCTAATATTTTCTTTTTTTTTGAAAACTCTGTATCCGATCCAAGGACCGACTAATATTGATTTATAATTCTTCTACCAGGAGGCAATAAATGAGTACGAGGGCACCGTTATCACCGTATCTCATGATCGGTACTTTATAAAGCAGATAGTTAATAGAGTGATTGAAGTTAAAGATGGCACTGTGCAGGATTATGCTGGAGATTACAATGTAAGTCAATCAATCCCCCCCTCCCCGCCATTAGCTTTTTTGTGTCCCATAGATTGTTTAAATATACTTTTTTTGAAAGATTCAGAGATAGTTGAAGCAGGTTAACTGGATACTATTCTTGATACAATTTGTTTTAGTCATCCATTGATCATTAGTATTACATGTGTTTTTTGTTGGATTCTTGGCGATATTTCAATGTTCAATACCATCTAGATGCAAATGATGATTTTGGATGCTTGACTTCCCTCATTCCTCAATTTTCTTAACTATCCGCTTTGCCCCCTTCTTGGCGATCTTGTTCATCACTAGTCTCATTTCTCACATCTTATTATAAAGTTTGAGTAAAACTGTAAAACTCTTTTTTCCCTCAGATTTCTTCACTTTATTTGGGTTCCAAATTATTAGTCCCTACCTGATGTATTCTGTTTTAATTTGGTTCCTTTGTGATAGGAATTTTACATTTTCGACAGCATATCTTTTTTTTCAACAGCATATCTGGAAAGTGTAATTGAGTTTTTTTTTTCCCTTTCAAAAAGTAAAATATGGAGTAATAATGAAGTGAACAGTCTTGTGGATGCTTTGCTCAATTTGTTCAGTCTTTCATTTCATAAGTGGAAGGATATAGGAAGCAGTATAAAAGTGAGTATAAGAATGATAGCAAATACGCCTGTGAGGGATCAAAAGGACTAAATAACTTAGACGATCAAAAGGACAAAATAACTTAGTTTTGACACTTGAGAGGGTCAACAATAGTTTTTTTTTTTACTAAAATTAAGGGGCCAGCTGTTGCTATTAAGCTCTCTTAGTGGCAGGATTCAGGGAAGGGTGGGTCTATTGTGAGTTTATTGTAGATAACTTTATCTTGTATATTAGATGTTCATAATCTAAGTTGCACTGGACATGTGTTCCATTTTTCGTCAAGGCTGTATGACGGTTACCTAATTTTGAGGGTATAATTTACCATGTTGATAGTAACTTCGTGATCATTTTCCGAAGCCATTTTTCATTGAATGATTCAATAGACATATGGTGATGCTGTAAGGGAAAAATATCTATCCAGTTTTGTATATAATGAATATGAATGCAACATGATCAGCCAATGCATGTTTGTTTATTGTTATAGGGTTCTAACAAAAGTTTGAATCTGAAAATTTGCAGTATTATTTGGAGAAGAATCTTGATGCCAGGGAAAAAGAGCTTGAACGCCAGGCTGAGCTTGACGACAAAGCTCCTAAATTGAAAGCCAAATCCAAGATGTCAAAGGTAAACTTCTGTGAAACTCATATGGATGAGGTGTTAAATAGTATTGAAGAGCTTTTATGATAGATTATAAATTTTATTGATTTATTTGAAAAATCAGGCTGAGAAAGAAGCAAGGAAGAAGCAAAAGATGCAGGCCTTTCAGCAAGCAAAACAGAAGTCTAAAGGTGCAAAGAATTCAAAGAGATGGAATTAA

Protein sequence

>MS.gene049356.t1

MELASKLHHLDLTGAFILDSRRLPRTLSHTHLIAKPNTFNTNTNPNRFFTSKKLNHTSRLSAVAAVDETSVAEDDIESLFTDTSVDERRGNNKQSNTGASSVSSGVKLENIRKTYKGVTVLKEVNWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDSGNVIKAKPNMKIAFLSQEFEVSPSRTVREEFMSAFKEEMEVAGKLEKVQKALEGSVNDLELMGRLLDEFDLLQRRAQAVNLDVVDSKISKLMPELGFGVEDSDRLVASFSGGWQMRMCLGKILLQEPDLLLLDEPTNHLDLDTIEWLEDYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYILSKATWIETQYAAWEKQQKEIEQTRELISRLGAGASSGRASTAEKKLERLLGEELVEKPFERKQMKIRFPVRGSSGRSVVTVRNLDFGFEDKKLFNKANLTIERGEKIAILGPNGCGKSTLLKLIMGLEKPISGEVILGEHNVLPNYFEQNQAEALDLEKTVLETVEEAAEDWRSDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYEGTVITVSHDRYFIKQIVNRVIEVKDGTVQDYAGDYNYYLEKNLDAREKELERQAELDDKAPKLKAKSKMSKAEKEARKKQKMQAFQQAKQKSKGAKNSKRWN