Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07050.t1 | XP_003625965.2 | 93.7 | 1185 | 68 | 2 | 1 | 1185 | 103 | 1280 | 0.00E+00 | 2056.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07050.t1 | O04716 | 69.4 | 953 | 282 | 2 | 184 | 1127 | 325 | 1276 | 0.0e+00 | 1333.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07050.t1 | G7KST2 | 93.7 | 1185 | 68 | 2 | 1 | 1185 | 103 | 1280 | 0.0e+00 | 2056.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050408 | MS.gene07050 | 0.922793 | 6.19E-89 | -1.69E-46 |
| MS.gene052665 | MS.gene07050 | 0.80944 | 1.89E-50 | -1.69E-46 |
| MS.gene055861 | MS.gene07050 | -0.811119 | 8.21E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 258 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTTGCTTGGCTGTGATTT+TGG | 0.151082 | 7.1:-4746864 | MS.gene07050:CDS |
| GCCTCCTTTATTCTTCTTAC+AGG | 0.162950 | 7.1:-4746923 | MS.gene07050:CDS |
| GATCATCTGAAGAGAATTTA+TGG | 0.180715 | 7.1:-4749652 | MS.gene07050:CDS |
| ATTGGCGCCTTTGAATAATT+TGG | 0.206877 | 7.1:-4752084 | MS.gene07050:CDS |
| CCGCAACCGTTTAAGCTTCT+TGG | 0.211969 | 7.1:+4752451 | None:intergenic |
| GCTCAGAAGTTTCACTTTCT+AGG | 0.220678 | 7.1:-4751548 | MS.gene07050:CDS |
| AGAGTGGAAATGAAGTTAAT+AGG | 0.221825 | 7.1:-4752127 | MS.gene07050:CDS |
| ACGAAGTCACCTTTCTTTAC+AGG | 0.240867 | 7.1:-4745397 | MS.gene07050:CDS |
| TAATTCCAAATGTGGAATTC+TGG | 0.241545 | 7.1:-4749693 | MS.gene07050:CDS |
| TCCTGAAGCTGCATATTTAA+TGG | 0.259152 | 7.1:-4750282 | MS.gene07050:CDS |
| GGAAGCTGTTGCAGGTTTAA+AGG | 0.263336 | 7.1:-4749142 | MS.gene07050:intron |
| GACAAATTCCTCACAAAATC+TGG | 0.269200 | 7.1:+4751256 | None:intergenic |
| AACCAATGTGTTACGGCGTT+TGG | 0.270484 | 7.1:-4749231 | MS.gene07050:CDS |
| TATTATACGGCCGGAGTTAT+TGG | 0.272733 | 7.1:+4748045 | None:intergenic |
| CAACTTTGATTGGAAGAGTT+TGG | 0.276106 | 7.1:+4745038 | None:intergenic |
| GGAGAAGATTGAGTGGATTC+AGG | 0.297208 | 7.1:-4752483 | MS.gene07050:CDS |
| TCAAAAGGCACATTAATAGA+TGG | 0.309098 | 7.1:-4750323 | MS.gene07050:CDS |
| AGAAGAAGATATGGAATTAG+AGG | 0.319574 | 7.1:-4752258 | MS.gene07050:CDS |
| GCCATTAAATATGCAGCTTC+AGG | 0.319588 | 7.1:+4750281 | None:intergenic |
| TGGCACGGGTGCTCTCTTCT+AGG | 0.330298 | 7.1:-4748495 | MS.gene07050:intron |
| CAGATCTCTTATGTTGGTAT+TGG | 0.331238 | 7.1:-4747818 | MS.gene07050:CDS |
| CGCCGAAGCTCCATCTGTTC+AGG | 0.336095 | 7.1:+4750592 | None:intergenic |
| CTCATCAACCCAACTTTGAT+TGG | 0.337658 | 7.1:+4745028 | None:intergenic |
| AGCAGAAACGGAGAGTCTTC+AGG | 0.339726 | 7.1:-4749358 | MS.gene07050:CDS |
| TGCTCTCTATTATTTGAAAC+AGG | 0.349767 | 7.1:-4749515 | MS.gene07050:CDS |
| TTAAACCTGCAACAGCTTCC+TGG | 0.356135 | 7.1:+4749145 | None:intergenic |
| CCTGCGTGGTCTTGAACTTA+TGG | 0.357425 | 7.1:-4748288 | MS.gene07050:CDS |
| GGAATGTATTGATCTTTCTA+AGG | 0.363678 | 7.1:-4752504 | MS.gene07050:CDS |
| GTCTAGGACACCCTGTTCTT+AGG | 0.369436 | 7.1:-4747009 | MS.gene07050:CDS |
| CTCCTTCATGAGGTATTATA+CGG | 0.373099 | 7.1:+4748032 | None:intergenic |
| ATCTCCTGGACGCCTTCGTT+TGG | 0.373919 | 7.1:+4751312 | None:intergenic |
| AGAATAAAGGAGGCCTGGTC+TGG | 0.374566 | 7.1:+4746932 | None:intergenic |
| TCGTAATTCATTGGTGGCTC+TGG | 0.380170 | 7.1:-4746077 | MS.gene07050:CDS |
| CCACCTATGGTTATGTCATT+AGG | 0.380822 | 7.1:+4746956 | None:intergenic |
| GGCGCGGTTCGTCTCCTATC+AGG | 0.381911 | 7.1:-4752430 | MS.gene07050:CDS |
| GTTGACTTCCCACCCATGTT+AGG | 0.382734 | 7.1:+4746899 | None:intergenic |
| ACCAATGTGTTACGGCGTTT+GGG | 0.383653 | 7.1:-4749230 | MS.gene07050:CDS |
| GAGTGGAAATGAAGTTAATA+GGG | 0.383967 | 7.1:-4752126 | MS.gene07050:CDS |
| ATTTCAAGGATGCCTTTGAT+TGG | 0.387401 | 7.1:-4748075 | MS.gene07050:CDS |
| TACAGGGCTTCGTTAGGTAT+TGG | 0.390031 | 7.1:-4747533 | MS.gene07050:intron |
| ACCTGACATGGAGCGGTTGC+TGG | 0.392250 | 7.1:-4748515 | MS.gene07050:CDS |
| CAAACTCTTCCAATCAAAGT+TGG | 0.392529 | 7.1:-4745037 | MS.gene07050:CDS |
| GAACGCCAGGAAGCTGTTGC+AGG | 0.394933 | 7.1:-4749150 | MS.gene07050:CDS |
| GCTACAAGCAGAGTCATTCT+TGG | 0.395732 | 7.1:-4750185 | MS.gene07050:CDS |
| CTTCCTCCAAGAAGCTTAAA+CGG | 0.396470 | 7.1:-4752457 | MS.gene07050:CDS |
| AACATTAACACCGTAGCTCT+TGG | 0.401484 | 7.1:+4745355 | None:intergenic |
| ATATCACGTGGAGTCAATAA+AGG | 0.405153 | 7.1:-4749172 | MS.gene07050:CDS |
| AGAATATGATTCAGCTTGTA+AGG | 0.405787 | 7.1:-4748002 | MS.gene07050:CDS |
| GCATCCCAGAATTCCACATT+TGG | 0.409996 | 7.1:+4749688 | None:intergenic |
| AGGACCTGTAAGAAGAATAA+AGG | 0.411814 | 7.1:+4746919 | None:intergenic |
| GCTCTGGATGAGCTTGGGCG+TGG | 0.413063 | 7.1:-4746061 | MS.gene07050:CDS |
| GGGAGCTTCATTTGTACATA+AGG | 0.416496 | 7.1:+4747048 | None:intergenic |
| GCCAGCAACCGCTCCATGTC+AGG | 0.418908 | 7.1:+4748514 | None:intergenic |
| ACATTAACACCGTAGCTCTT+GGG | 0.420561 | 7.1:+4745356 | None:intergenic |
| CATAAGGCCCCAACAAAACT+TGG | 0.422632 | 7.1:+4747064 | None:intergenic |
| AGCTTGAATTGCAGTATATG+AGG | 0.422859 | 7.1:-4750943 | MS.gene07050:CDS |
| TGATGATGAAGAAGAAGATA+TGG | 0.423869 | 7.1:-4752267 | MS.gene07050:CDS |
| GTTAATGTTGCTCGGTTAGC+TGG | 0.424808 | 7.1:-4745341 | MS.gene07050:intron |
| CTTGAGATGATCTAACAAAC+TGG | 0.428020 | 7.1:+4747961 | None:intergenic |
| CTTCATTTCCACTACCAACT+TGG | 0.428144 | 7.1:+4745426 | None:intergenic |
| AATTCCAAATGTGGAATTCT+GGG | 0.429851 | 7.1:-4749692 | MS.gene07050:CDS |
| AAGGTGTCACTCCTAAGAAC+AGG | 0.430782 | 7.1:+4746998 | None:intergenic |
| ATACGTGGCCTCGAATTCTC+TGG | 0.432996 | 7.1:+4745088 | None:intergenic |
| TCTTCTTCGCCAAGTTTGCT+TGG | 0.433375 | 7.1:-4746876 | MS.gene07050:CDS |
| AAATCACAGCCAAGCAAACT+TGG | 0.436638 | 7.1:+4746867 | None:intergenic |
| CAAATATCTCGAGATTCTCT+AGG | 0.439006 | 7.1:+4749386 | None:intergenic |
| TTTCAAGGATGCCTTTGATT+GGG | 0.441751 | 7.1:-4748074 | MS.gene07050:CDS |
| GGCATTTACAGGGCTTCGTT+AGG | 0.442920 | 7.1:-4747539 | MS.gene07050:intron |
| CTGGGATGCTGATAGAACTT+TGG | 0.443715 | 7.1:-4749674 | MS.gene07050:CDS |
| GCCAGCCATGATATTATCTC+TGG | 0.444404 | 7.1:+4746605 | None:intergenic |
| CTCTGGATGAGCTTGGGCGT+GGG | 0.447621 | 7.1:-4746060 | MS.gene07050:CDS |
| GAGGAATTTGTCAGGTGGCC+AGG | 0.448895 | 7.1:-4751245 | MS.gene07050:intron |
| GCAGGTTTCACAATTTCAAC+TGG | 0.449601 | 7.1:+4749784 | None:intergenic |
| TTGGTGGCTCTGGATGAGCT+TGG | 0.451279 | 7.1:-4746067 | MS.gene07050:CDS |
| TCAATCACCATCTTCCTGAT+AGG | 0.452754 | 7.1:+4752416 | None:intergenic |
| TTCACTGAGAAATTCTTCTC+TGG | 0.453880 | 7.1:+4750791 | None:intergenic |
| CAAAAGGCACATTAATAGAT+GGG | 0.457854 | 7.1:-4750322 | MS.gene07050:CDS |
| CTACAAGCAGAGTCATTCTT+GGG | 0.468134 | 7.1:-4750184 | MS.gene07050:CDS |
| CATGGATCTGAATCATTTCA+AGG | 0.469617 | 7.1:-4748089 | MS.gene07050:CDS |
| TAAAGGAAAGAGTAGCAATA+AGG | 0.469819 | 7.1:-4752210 | MS.gene07050:CDS |
| CTCAGTGAATGTAGAGAGAC+TGG | 0.470800 | 7.1:-4750777 | MS.gene07050:CDS |
| AAACTCTTCCAATCAAAGTT+GGG | 0.471127 | 7.1:-4745036 | MS.gene07050:CDS |
| ATGATTCGGAAGATGAAGAC+TGG | 0.471812 | 7.1:-4752322 | MS.gene07050:CDS |
| TGGTGGCTCTGGATGAGCTT+GGG | 0.474116 | 7.1:-4746066 | MS.gene07050:CDS |
| GCTCTATCTTGTCTGAGATC+AGG | 0.476786 | 7.1:-4749807 | MS.gene07050:CDS |
| CATGGAGCGGTTGCTGGCAC+GGG | 0.477706 | 7.1:-4748509 | MS.gene07050:CDS |
| ATCTAAGCAACTGCTCATCT+AGG | 0.478804 | 7.1:+4749488 | None:intergenic |
| ATTGACTCCACGTGATATAA+CGG | 0.479752 | 7.1:+4749177 | None:intergenic |
| CACCTGAACAGATGGAGCTT+CGG | 0.481803 | 7.1:-4750594 | MS.gene07050:CDS |
| GATGGTGATTGAGGAGAATG+AGG | 0.484439 | 7.1:-4752405 | MS.gene07050:CDS |
| GGCCTCGAATTCTCTGGACT+TGG | 0.484449 | 7.1:+4745094 | None:intergenic |
| ATCAGCCACTCGTAATTCAT+TGG | 0.488238 | 7.1:-4746086 | MS.gene07050:CDS |
| CTCTCATGCTGAATCTGAAA+GGG | 0.489062 | 7.1:-4747478 | MS.gene07050:CDS |
| ATTGCTAGTGATTACTATGA+AGG | 0.489400 | 7.1:-4747100 | MS.gene07050:CDS |
| ACATGGAGCGGTTGCTGGCA+CGG | 0.489449 | 7.1:-4748510 | MS.gene07050:CDS |
| TGTAGAGAGACTGGCTAGAA+AGG | 0.491181 | 7.1:-4750768 | MS.gene07050:intron |
| TAAAAGATGACTAAGCTGTC+TGG | 0.493182 | 7.1:+4748220 | None:intergenic |
| GTGCGCTCTGACATTTCACT+TGG | 0.493379 | 7.1:+4750233 | None:intergenic |
| TAAATATGCAGCTTCAGGAT+TGG | 0.495476 | 7.1:+4750286 | None:intergenic |
| TAATAAAGTGGTTCTGTATG+AGG | 0.495859 | 7.1:-4748348 | MS.gene07050:CDS |
| TTCAGATCCATGCTTACATC+AGG | 0.496298 | 7.1:+4748100 | None:intergenic |
| GGCCTGGTCTGGACCACCTA+TGG | 0.496477 | 7.1:+4746943 | None:intergenic |
| GAAGTTGTAGAGAGTGCTAA+AGG | 0.499551 | 7.1:-4752227 | MS.gene07050:CDS |
| GCAGAAACGGAGAGTCTTCA+GGG | 0.500501 | 7.1:-4749357 | MS.gene07050:intron |
| GTTCTTAGGAGTGACACCTT+AGG | 0.502432 | 7.1:-4746995 | MS.gene07050:CDS |
| ACCAGCTCCAGTAAAACATC+TGG | 0.503484 | 7.1:+4749583 | None:intergenic |
| TTTGACAGTACCTTCGTACC+AGG | 0.503746 | 7.1:+4752580 | None:intergenic |
| CAAGTTGGTAGTGGAAATGA+AGG | 0.504132 | 7.1:-4745425 | MS.gene07050:CDS |
| GACTGAAACACCTGAACAGA+TGG | 0.505373 | 7.1:-4750602 | MS.gene07050:CDS |
| TACTCAGTGCTGAAACAGAA+AGG | 0.506285 | 7.1:-4749756 | MS.gene07050:CDS |
| ACTGGCCTTTAGACGAAGCC+TGG | 0.508254 | 7.1:-4752598 | None:intergenic |
| TTCAGAAACTGCAACAATGC+TGG | 0.508469 | 7.1:-4746559 | MS.gene07050:intron |
| TCAGCACTGAGTAGTTTAGC+AGG | 0.508590 | 7.1:+4749766 | None:intergenic |
| GACAATTCAAAACTTTCTGA+AGG | 0.508600 | 7.1:+4746660 | None:intergenic |
| CAACCGTTTAAGCTTCTTGG+AGG | 0.510878 | 7.1:+4752454 | None:intergenic |
| CGTGGGACCTCAACGTCTGA+TGG | 0.511144 | 7.1:-4746043 | MS.gene07050:CDS |
| TGCCAAGTCCAGAGAATTCG+AGG | 0.511558 | 7.1:-4745096 | MS.gene07050:CDS |
| TGGAAAGGACACATACCTAT+TGG | 0.515871 | 7.1:-4747798 | MS.gene07050:CDS |
| TAAGAAGAATAAAGGAGGCC+TGG | 0.517562 | 7.1:+4746927 | None:intergenic |
| TGGTAGTGGAAATGAAGGTT+TGG | 0.520746 | 7.1:-4745420 | MS.gene07050:CDS |
| TCTTGCTTCAAAACCATACA+TGG | 0.521293 | 7.1:-4749425 | MS.gene07050:CDS |
| AAGGAACAAAGGAAATTACT+TGG | 0.522279 | 7.1:-4747941 | MS.gene07050:CDS |
| ATGGCATGCCAAGTTGGTAG+TGG | 0.522448 | 7.1:-4745434 | MS.gene07050:CDS |
| AGCTGTTAAGCTCTCACCAT+TGG | 0.522564 | 7.1:-4752102 | MS.gene07050:CDS |
| GCCAGAGATAATATCATGGC+TGG | 0.523474 | 7.1:-4746606 | MS.gene07050:CDS |
| TGATGATGATAATGATGATT+CGG | 0.524108 | 7.1:-4752336 | MS.gene07050:CDS |
| TCAATTAAACCAATGTGTTA+CGG | 0.526620 | 7.1:-4749238 | MS.gene07050:CDS |
| TTAGACGAAGCCTGGTACGA+AGG | 0.526731 | 7.1:-4752590 | None:intergenic |
| GATGCCAAACGAAGGCGTCC+AGG | 0.527682 | 7.1:-4751316 | MS.gene07050:CDS |
| GGCGCAGACAATGTTGCAAC+TGG | 0.527921 | 7.1:-4751602 | MS.gene07050:CDS |
| TTTCACTTGGATTGTTCTCA+CGG | 0.528806 | 7.1:+4750246 | None:intergenic |
| AAGCAGAGTCATTCTTGGGC+AGG | 0.530004 | 7.1:-4750180 | MS.gene07050:intron |
| TGTCTTCTAGGTTGTGAGAC+GGG | 0.530777 | 7.1:-4750363 | MS.gene07050:intron |
| ACAGCATCAAGAACCATGTA+TGG | 0.531206 | 7.1:+4749412 | None:intergenic |
| GGTTGATGAGATAATAGTCT+TGG | 0.531511 | 7.1:-4745015 | MS.gene07050:CDS |
| CAGTTGGTGTCTGCAACTGC+TGG | 0.534677 | 7.1:-4747387 | MS.gene07050:intron |
| GAGCTTCGGCGCAAGGAGAA+CGG | 0.534768 | 7.1:-4750580 | MS.gene07050:CDS |
| ATATTTGAGAATAGCAGAAA+CGG | 0.536056 | 7.1:-4749370 | MS.gene07050:CDS |
| TGTTGCAGTTTCTGAAAGCT+CGG | 0.537660 | 7.1:+4746566 | None:intergenic |
| ATATGCGCAGTGGTTTCAAA+AGG | 0.539354 | 7.1:-4750338 | MS.gene07050:CDS |
| AAATTATTCAAAGGCGCCAA+TGG | 0.539998 | 7.1:+4752086 | None:intergenic |
| TATCAGGAAGATGGTGATTG+AGG | 0.540522 | 7.1:-4752414 | MS.gene07050:CDS |
| GGCGCCTTTGAATAATTTGG+AGG | 0.541353 | 7.1:-4752081 | MS.gene07050:CDS |
| TCTCTCATGCTGAATCTGAA+AGG | 0.542042 | 7.1:-4747479 | MS.gene07050:CDS |
| AAGCTTCACTATAGATTGAT+CGG | 0.542729 | 7.1:+4744941 | None:intergenic |
| AGCGGACAGCCTGTAAAGAA+AGG | 0.544754 | 7.1:+4745388 | None:intergenic |
| CAAGGATGCCTTTGATTGGG+TGG | 0.545507 | 7.1:-4748071 | MS.gene07050:CDS |
| TCTTCTTACAGGTCCTAACA+TGG | 0.545833 | 7.1:-4746912 | MS.gene07050:CDS |
| CCAAGAAGCTTAAACGGTTG+CGG | 0.546594 | 7.1:-4752451 | MS.gene07050:CDS |
| TTTCTTTACAGGCTGTCCGC+TGG | 0.546981 | 7.1:-4745386 | MS.gene07050:CDS |
| ATTTGTCGCAGAATATTCCT+CGG | 0.547040 | 7.1:-4747763 | MS.gene07050:CDS |
| GGAGTCAATAAAGGAACGCC+AGG | 0.547592 | 7.1:-4749163 | MS.gene07050:CDS |
| CTATGACAGATCTCTTATGT+TGG | 0.552864 | 7.1:-4747824 | MS.gene07050:intron |
| TGATTCGGAAGATGAAGACT+GGG | 0.552892 | 7.1:-4752321 | MS.gene07050:CDS |
| TCGTTATGATGATGATGAAG+AGG | 0.552933 | 7.1:-4752525 | MS.gene07050:CDS |
| GTACGTAGCGTGCAGTGTCG+TGG | 0.553211 | 7.1:-4745868 | MS.gene07050:CDS |
| TTTGAAATGGATGCACATGT+AGG | 0.554093 | 7.1:-4750974 | MS.gene07050:CDS |
| CTCTTATGTTGGTATTGGAA+AGG | 0.556055 | 7.1:-4747813 | MS.gene07050:CDS |
| GAGCACTAAAATCGTTATTG+TGG | 0.557499 | 7.1:+4749629 | None:intergenic |
| CATTAACACCGTAGCTCTTG+GGG | 0.557755 | 7.1:+4745357 | None:intergenic |
| ATTGGCTTCCACCCAATCAA+AGG | 0.558713 | 7.1:+4748063 | None:intergenic |
| AGAGAATTCGAGGCCACGTA+TGG | 0.559797 | 7.1:-4745086 | MS.gene07050:CDS |
| TTCGTCTCCTATCAGGAAGA+TGG | 0.560569 | 7.1:-4752423 | MS.gene07050:CDS |
| AGTGAAACTTCTGAGCTTCG+CGG | 0.561044 | 7.1:+4751555 | None:intergenic |
| GCACAAGCTTGCTTGTCACT+CGG | 0.561258 | 7.1:-4748266 | MS.gene07050:CDS |
| AACCATAGGTGGTCCAGACC+AGG | 0.561685 | 7.1:-4746945 | MS.gene07050:CDS |
| TACAAAGGCACTCTTTCCTA+AGG | 0.561689 | 7.1:+4746979 | None:intergenic |
| TTTGTCGCAGAATATTCCTC+GGG | 0.561787 | 7.1:-4747762 | MS.gene07050:CDS |
| ACAGATGGAGCTTCGGCGCA+AGG | 0.563478 | 7.1:-4750587 | MS.gene07050:CDS |
| AGCCACTCGTAATTCATTGG+TGG | 0.564226 | 7.1:-4746083 | MS.gene07050:CDS |
| TTCATGAGGTATTATACGGC+CGG | 0.565363 | 7.1:+4748036 | None:intergenic |
| TGGAAGGAATGCTAATAAAG+TGG | 0.565708 | 7.1:-4748360 | MS.gene07050:CDS |
| GAATTAACTCATTCACTAGA+GGG | 0.566090 | 7.1:+4749710 | None:intergenic |
| GCTCACATGGCATGCCAAGT+TGG | 0.566170 | 7.1:-4745440 | MS.gene07050:CDS |
| TACATCTATGCTAAAAGTCT+AGG | 0.570534 | 7.1:-4747025 | MS.gene07050:CDS |
| GGAATTAACTCATTCACTAG+AGG | 0.571162 | 7.1:+4749709 | None:intergenic |
| GGAGAACGGCTCTAAAGATA+AGG | 0.572138 | 7.1:-4750566 | MS.gene07050:intron |
| GGTACTTGCCCCAAGAGCTA+CGG | 0.572527 | 7.1:-4745365 | MS.gene07050:CDS |
| ACTCAGTGCTGAAACAGAAA+GGG | 0.573892 | 7.1:-4749755 | MS.gene07050:CDS |
| TCCCAAACGCCGTAACACAT+TGG | 0.574302 | 7.1:+4749229 | None:intergenic |
| TTTCTAAGGAGAAGATTGAG+TGG | 0.576427 | 7.1:-4752490 | MS.gene07050:CDS |
| AAAGGTCTGTCTCGCTCACA+TGG | 0.577448 | 7.1:-4745453 | MS.gene07050:intron |
| ATGGTGATTGAGGAGAATGA+GGG | 0.579087 | 7.1:-4752404 | MS.gene07050:CDS |
| AGCTTTCTGAAGCACAGAAG+TGG | 0.579708 | 7.1:+4745121 | None:intergenic |
| GCTACGGTGTTAATGTTGCT+CGG | 0.580069 | 7.1:-4745349 | MS.gene07050:CDS |
| GAATGAGTTAATTCCAAATG+TGG | 0.581557 | 7.1:-4749701 | MS.gene07050:CDS |
| GCTTGAATTGCAGTATATGA+GGG | 0.582237 | 7.1:-4750942 | MS.gene07050:intron |
| CGTTCTGTATTTACCATACG+TGG | 0.582471 | 7.1:+4745073 | None:intergenic |
| TTCTCTGGAAAACCACAATG+AGG | 0.585216 | 7.1:+4750806 | None:intergenic |
| AGAAGTGCACTCTCAGCACT+TGG | 0.585933 | 7.1:-4749541 | MS.gene07050:CDS |
| GCGCCTTTGAATAATTTGGA+GGG | 0.587149 | 7.1:-4752080 | MS.gene07050:intron |
| GGAAGAGACTGCTAAAGTCA+TGG | 0.587236 | 7.1:-4749209 | MS.gene07050:CDS |
| ACAAAACTTGGTCTGCATGT+TGG | 0.587327 | 7.1:+4747076 | None:intergenic |
| GTACCTAATGACATAACCAT+AGG | 0.587761 | 7.1:-4746959 | MS.gene07050:CDS |
| ACAATTCAAAACTTTCTGAA+GGG | 0.588284 | 7.1:+4746661 | None:intergenic |
| CATGAAAGCAGGGATGCTAG+TGG | 0.591004 | 7.1:-4748380 | MS.gene07050:intron |
| GATGTTTCGAAGTACCGCTA+TGG | 0.592163 | 7.1:+4752552 | None:intergenic |
| TTACAGGTCCTAACATGGGT+GGG | 0.593036 | 7.1:-4746907 | MS.gene07050:CDS |
| GCTTTCTGAAGCACAGAAGT+GGG | 0.593242 | 7.1:+4745122 | None:intergenic |
| CATAAGTTCAAGACCACGCA+GGG | 0.593320 | 7.1:+4748289 | None:intergenic |
| AGGTCTTCCTGATGTAAGCA+TGG | 0.593997 | 7.1:-4748107 | MS.gene07050:CDS |
| GGCCGTATAATACCTCATGA+AGG | 0.595756 | 7.1:-4748034 | MS.gene07050:CDS |
| GAAATGTCAGAGCGCACCTA+CGG | 0.597696 | 7.1:-4750227 | MS.gene07050:CDS |
| TGCTGTATTGGAGAATGTTG+TGG | 0.597856 | 7.1:-4752291 | MS.gene07050:CDS |
| AAATATCTCGAGATTCTCTA+GGG | 0.598045 | 7.1:+4749387 | None:intergenic |
| TGTCTTGGTACAGAGATCGC+AGG | 0.600238 | 7.1:-4751339 | MS.gene07050:intron |
| TCTTTGTCAACTCCTTCATG+AGG | 0.601102 | 7.1:+4748022 | None:intergenic |
| GCAGTTAGAAAGACATCTGA+CGG | 0.602012 | 7.1:-4751623 | MS.gene07050:intron |
| CAAAGTTACCTGACATGGAG+CGG | 0.602545 | 7.1:-4748522 | MS.gene07050:CDS |
| CTCAGACAAGATAGAGCACA+AGG | 0.604443 | 7.1:+4749813 | None:intergenic |
| AAAAGGCACATTAATAGATG+GGG | 0.608960 | 7.1:-4750321 | MS.gene07050:CDS |
| AGATTATCTCAAAGATCCCA+AGG | 0.613826 | 7.1:-4745812 | MS.gene07050:intron |
| TCACCCTCCAAATTATTCAA+AGG | 0.615135 | 7.1:+4752077 | None:intergenic |
| CTTACAGGTCCTAACATGGG+TGG | 0.616004 | 7.1:-4746908 | MS.gene07050:CDS |
| TTTCGAAATTCTAGCGTGTG+AGG | 0.617291 | 7.1:+4748553 | None:intergenic |
| GGTTATGTCATTAGGTACAA+AGG | 0.618898 | 7.1:+4746964 | None:intergenic |
| AGTGCACTCTCAGCACTTGG+TGG | 0.620015 | 7.1:-4749538 | MS.gene07050:CDS |
| GGCTTGTCCATCAGACGTTG+AGG | 0.620456 | 7.1:+4746036 | None:intergenic |
| CAGTTTGTTAGATCATCTCA+AGG | 0.621088 | 7.1:-4747960 | MS.gene07050:CDS |
| ACGCAAGAAAACTGCTAGCA+CGG | 0.621770 | 7.1:-4744911 | MS.gene07050:CDS |
| CTTCTTACAGGTCCTAACAT+GGG | 0.624245 | 7.1:-4746911 | MS.gene07050:CDS |
| TAGGGAGAGCAACCTCATTG+TGG | 0.625346 | 7.1:-4750818 | MS.gene07050:CDS |
| TAGATCATCTCAAGGAACAA+AGG | 0.627293 | 7.1:-4747952 | MS.gene07050:CDS |
| ATTATCAAAGTTACCTGACA+TGG | 0.627362 | 7.1:-4748527 | MS.gene07050:CDS |
| GGGTGCCAGAGATAATATCA+TGG | 0.627710 | 7.1:-4746610 | MS.gene07050:CDS |
| TGCAAGACCGTTATATCACG+TGG | 0.628002 | 7.1:-4749184 | MS.gene07050:CDS |
| GCGGAGCGCAAATCTTTCAG+AGG | 0.631888 | 7.1:+4751574 | None:intergenic |
| AGACCACTGAAAACAGCACA+TGG | 0.633212 | 7.1:+4749445 | None:intergenic |
| TCACACTCAGTGGAAGCAGT+TGG | 0.633973 | 7.1:-4747403 | MS.gene07050:CDS |
| TGGGTGGAAGCCAATAACTC+CGG | 0.636891 | 7.1:-4748055 | MS.gene07050:CDS |
| ATGTCTTCTAGGTTGTGAGA+CGG | 0.636937 | 7.1:-4750364 | MS.gene07050:intron |
| GCTCTTGGGGCAAGTACCAG+CGG | 0.638844 | 7.1:+4745370 | None:intergenic |
| GTCTTGGTACAGAGATCGCA+GGG | 0.639706 | 7.1:-4751338 | MS.gene07050:intron |
| ACCTGTAAGAAGAATAAAGG+AGG | 0.640334 | 7.1:+4746922 | None:intergenic |
| CCTAATGACATAACCATAGG+TGG | 0.642373 | 7.1:-4746956 | MS.gene07050:CDS |
| GAGTTTATTTCAGCCCTGCG+TGG | 0.642478 | 7.1:-4748302 | MS.gene07050:CDS |
| AAAGCAGGGATGCTAGTGGA+AGG | 0.642520 | 7.1:-4748376 | MS.gene07050:intron |
| CCATAAGTTCAAGACCACGC+AGG | 0.655964 | 7.1:+4748288 | None:intergenic |
| ATCGCAGGGATGCCAAACGA+AGG | 0.657353 | 7.1:-4751324 | MS.gene07050:CDS |
| GGAGTTCAAGTCAAAACACA+TGG | 0.657430 | 7.1:-4751132 | MS.gene07050:CDS |
| TTTGTGAGGAATTTGTCAGG+TGG | 0.659493 | 7.1:-4751250 | MS.gene07050:CDS |
| GGGAGAAGAAAGTCCCAAAG+AGG | 0.662744 | 7.1:-4752384 | MS.gene07050:CDS |
| TTTGTGAACATCACACTCAG+TGG | 0.665331 | 7.1:-4747413 | MS.gene07050:CDS |
| AAATTCCTCACAAAATCTGG+AGG | 0.671639 | 7.1:+4751259 | None:intergenic |
| AGCCACCAATGAATTACGAG+TGG | 0.674310 | 7.1:+4746081 | None:intergenic |
| CACGTATGGTAAATACAGAA+CGG | 0.676522 | 7.1:-4745072 | MS.gene07050:CDS |
| AAGCTTAAACGGTTGCGGCG+CGG | 0.676658 | 7.1:-4752446 | MS.gene07050:CDS |
| AGGTGTCACTCCTAAGAACA+GGG | 0.676676 | 7.1:+4746999 | None:intergenic |
| GATTCGGAAGATGAAGACTG+GGG | 0.682741 | 7.1:-4752320 | MS.gene07050:CDS |
| ATTCGGAAGATGAAGACTGG+GGG | 0.689165 | 7.1:-4752319 | MS.gene07050:CDS |
| TTTGGTGAATGCAGAAACAA+TGG | 0.691100 | 7.1:-4751157 | MS.gene07050:intron |
| GAGACGGGAAATATGCGCAG+TGG | 0.691857 | 7.1:-4750348 | MS.gene07050:CDS |
| TGTTAATAATTTGAGCTGCG+AGG | 0.692395 | 7.1:-4744973 | MS.gene07050:CDS |
| GAACGTCTCTCATAATCCCG+AGG | 0.697284 | 7.1:+4747746 | None:intergenic |
| GGTGAATGCAGAAACAATGG+TGG | 0.700703 | 7.1:-4751154 | MS.gene07050:intron |
| ATCAACTACACAAACACCGT+AGG | 0.705252 | 7.1:+4750211 | None:intergenic |
| GTGAATGCAGAAACAATGGT+GGG | 0.716883 | 7.1:-4751153 | MS.gene07050:intron |
| ACTGTCAAATCGTTCCATAG+CGG | 0.743883 | 7.1:-4752566 | MS.gene07050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 4744905 | 4752608 | 4744905 | ID=MS.gene07050 |
| chr7.1 | mRNA | 4744905 | 4752608 | 4744905 | ID=MS.gene07050.t1;Parent=MS.gene07050 |
| chr7.1 | exon | 4752081 | 4752608 | 4752081 | ID=MS.gene07050.t1.exon1;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4752081 | 4752608 | 4752081 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4751545 | 4751641 | 4751545 | ID=MS.gene07050.t1.exon2;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4751545 | 4751641 | 4751545 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4751246 | 4751348 | 4751246 | ID=MS.gene07050.t1.exon3;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4751246 | 4751348 | 4751246 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4751112 | 4751165 | 4751112 | ID=MS.gene07050.t1.exon4;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4751112 | 4751165 | 4751112 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4750943 | 4751017 | 4750943 | ID=MS.gene07050.t1.exon5;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4750943 | 4751017 | 4750943 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4750769 | 4750837 | 4750769 | ID=MS.gene07050.t1.exon6;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4750769 | 4750837 | 4750769 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4750567 | 4750650 | 4750567 | ID=MS.gene07050.t1.exon7;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4750567 | 4750650 | 4750567 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4750181 | 4750375 | 4750181 | ID=MS.gene07050.t1.exon8;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4750181 | 4750375 | 4750181 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4749358 | 4749860 | 4749358 | ID=MS.gene07050.t1.exon9;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4749358 | 4749860 | 4749358 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4749143 | 4749272 | 4749143 | ID=MS.gene07050.t1.exon10;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4749143 | 4749272 | 4749143 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4748496 | 4748587 | 4748496 | ID=MS.gene07050.t1.exon11;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4748496 | 4748587 | 4748496 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4748213 | 4748391 | 4748213 | ID=MS.gene07050.t1.exon12;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4748213 | 4748391 | 4748213 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4747931 | 4748133 | 4747931 | ID=MS.gene07050.t1.exon13;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4747931 | 4748133 | 4747931 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4747736 | 4747837 | 4747736 | ID=MS.gene07050.t1.exon14;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4747736 | 4747837 | 4747736 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4747388 | 4747550 | 4747388 | ID=MS.gene07050.t1.exon15;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4747388 | 4747550 | 4747388 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4746859 | 4747148 | 4746859 | ID=MS.gene07050.t1.exon16;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4746859 | 4747148 | 4746859 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4746560 | 4746697 | 4746560 | ID=MS.gene07050.t1.exon17;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4746560 | 4746697 | 4746560 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4746031 | 4746110 | 4746031 | ID=MS.gene07050.t1.exon18;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4746031 | 4746110 | 4746031 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4745813 | 4745912 | 4745813 | ID=MS.gene07050.t1.exon19;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4745813 | 4745912 | 4745813 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4745342 | 4745471 | 4745342 | ID=MS.gene07050.t1.exon20;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4745342 | 4745471 | 4745342 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| chr7.1 | exon | 4744905 | 4745149 | 4744905 | ID=MS.gene07050.t1.exon21;Parent=MS.gene07050.t1 |
| chr7.1 | CDS | 4744905 | 4745149 | 4744905 | ID=cds.MS.gene07050.t1;Parent=MS.gene07050.t1 |
| Gene Sequence |
| Protein sequence |
