Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070614.t1 | XP_013445563.1 | 97.6 | 753 | 15 | 2 | 1 | 750 | 1 | 753 | 0.00E+00 | 1477.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070614.t1 | Q9LID0 | 63.6 | 748 | 255 | 7 | 1 | 744 | 1 | 735 | 6.7e-280 | 964.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070614.t1 | A0A072TPZ6 | 97.6 | 753 | 15 | 2 | 1 | 750 | 1 | 753 | 0.0e+00 | 1477.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene070614.t1 | TR | SWI/SNF-SWI3 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056050 | MS.gene070614 | 0.809975 | 1.45E-50 | -1.69E-46 |
MS.gene056173 | MS.gene070614 | 0.802473 | 5.52E-49 | -1.69E-46 |
MS.gene056366 | MS.gene070614 | 0.826026 | 3.40E-54 | -1.69E-46 |
MS.gene056792 | MS.gene070614 | 0.802749 | 4.84E-49 | -1.69E-46 |
MS.gene057444 | MS.gene070614 | 0.820192 | 7.81E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070614.t1 | MTR_8g464450 | 97.610 | 753 | 15 | 2 | 1 | 750 | 1 | 753 | 0.0 | 1518 |
MS.gene070614.t1 | MTR_3g055090 | 85.346 | 737 | 101 | 4 | 17 | 750 | 15 | 747 | 0.0 | 1290 |
MS.gene070614.t1 | MTR_1g050535 | 52.755 | 726 | 304 | 8 | 53 | 746 | 99 | 817 | 0.0 | 746 |
MS.gene070614.t1 | MTR_1g050535 | 52.755 | 726 | 304 | 8 | 53 | 746 | 99 | 817 | 0.0 | 746 |
MS.gene070614.t1 | MTR_6g084700 | 51.719 | 698 | 311 | 7 | 47 | 729 | 101 | 787 | 0.0 | 730 |
MS.gene070614.t1 | MTR_3g054420 | 74.519 | 208 | 40 | 2 | 543 | 750 | 88 | 282 | 8.66e-97 | 301 |
MS.gene070614.t1 | MTR_3g113170 | 39.787 | 470 | 242 | 10 | 164 | 598 | 883 | 1346 | 3.74e-91 | 313 |
MS.gene070614.t1 | MTR_3g055020 | 75.000 | 204 | 35 | 3 | 548 | 750 | 256 | 444 | 4.70e-91 | 292 |
MS.gene070614.t1 | MTR_3g113170 | 39.787 | 470 | 242 | 10 | 164 | 598 | 883 | 1346 | 4.83e-91 | 313 |
MS.gene070614.t1 | MTR_1g023510 | 38.367 | 490 | 238 | 12 | 164 | 598 | 867 | 1347 | 3.24e-89 | 308 |
MS.gene070614.t1 | MTR_3g064370 | 30.263 | 456 | 284 | 13 | 163 | 603 | 29 | 465 | 5.95e-50 | 183 |
MS.gene070614.t1 | MTR_3g449620 | 32.599 | 454 | 254 | 15 | 163 | 592 | 29 | 454 | 5.21e-43 | 163 |
MS.gene070614.t1 | MTR_5g090300 | 32.379 | 454 | 255 | 15 | 163 | 592 | 29 | 454 | 8.66e-42 | 159 |
MS.gene070614.t1 | MTR_3g064370 | 28.358 | 402 | 260 | 11 | 216 | 603 | 1 | 388 | 5.00e-37 | 144 |
MS.gene070614.t1 | MTR_3g064370 | 29.428 | 367 | 232 | 9 | 163 | 515 | 29 | 382 | 3.23e-36 | 141 |
MS.gene070614.t1 | MTR_2g039160 | 26.412 | 549 | 269 | 20 | 164 | 597 | 8 | 536 | 6.95e-33 | 134 |
MS.gene070614.t1 | MTR_1g087420 | 48.462 | 130 | 30 | 2 | 98 | 227 | 1 | 93 | 1.81e-30 | 115 |
MS.gene070614.t1 | MTR_1g087430 | 48.447 | 161 | 29 | 2 | 99 | 259 | 29 | 135 | 2.66e-29 | 113 |
MS.gene070614.t1 | MTR_1g087400 | 55.000 | 100 | 24 | 1 | 161 | 260 | 2 | 80 | 7.80e-26 | 102 |
MS.gene070614.t1 | MTR_3g033000 | 23.778 | 450 | 273 | 15 | 187 | 602 | 33 | 446 | 2.11e-20 | 95.9 |
MS.gene070614.t1 | MTR_1g087410 | 36.207 | 174 | 42 | 3 | 30 | 203 | 20 | 124 | 4.00e-15 | 73.2 |
MS.gene070614.t1 | MTR_4g079105 | 54.667 | 75 | 31 | 2 | 108 | 179 | 16 | 90 | 2.10e-14 | 71.2 |
MS.gene070614.t1 | MTR_3g033000 | 24.190 | 401 | 233 | 16 | 187 | 552 | 33 | 397 | 2.35e-13 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070614.t1 | AT3G13682 | 63.431 | 752 | 258 | 7 | 1 | 748 | 1 | 739 | 0.0 | 963 |
MS.gene070614.t1 | AT3G10390 | 52.347 | 703 | 317 | 4 | 53 | 737 | 127 | 829 | 0.0 | 768 |
MS.gene070614.t1 | AT3G10390 | 52.347 | 703 | 317 | 4 | 53 | 737 | 127 | 829 | 0.0 | 768 |
MS.gene070614.t1 | AT3G10390 | 52.489 | 703 | 316 | 4 | 53 | 737 | 75 | 777 | 0.0 | 768 |
MS.gene070614.t1 | AT3G10390 | 52.489 | 703 | 316 | 4 | 53 | 737 | 75 | 777 | 0.0 | 766 |
MS.gene070614.t1 | AT1G62830 | 50.912 | 713 | 310 | 8 | 47 | 737 | 147 | 841 | 0.0 | 724 |
MS.gene070614.t1 | AT4G16310 | 36.364 | 495 | 255 | 10 | 161 | 600 | 617 | 1106 | 2.53e-85 | 296 |
MS.gene070614.t1 | AT4G16310 | 36.364 | 495 | 255 | 10 | 161 | 600 | 617 | 1106 | 2.53e-85 | 296 |
MS.gene070614.t1 | AT4G16310 | 36.364 | 495 | 255 | 10 | 161 | 600 | 617 | 1106 | 2.53e-85 | 296 |
MS.gene070614.t1 | AT4G16310 | 36.364 | 495 | 255 | 10 | 161 | 600 | 617 | 1106 | 2.53e-85 | 296 |
MS.gene070614.t1 | AT4G16310 | 36.364 | 495 | 255 | 10 | 161 | 600 | 617 | 1106 | 2.53e-85 | 296 |
MS.gene070614.t1 | AT1G65840 | 31.760 | 466 | 272 | 14 | 151 | 589 | 7 | 453 | 5.66e-53 | 191 |
MS.gene070614.t1 | AT3G59050 | 31.210 | 471 | 282 | 15 | 141 | 592 | 8 | 455 | 5.43e-50 | 183 |
MS.gene070614.t1 | AT2G43020 | 31.264 | 435 | 261 | 14 | 175 | 592 | 41 | 454 | 3.20e-46 | 172 |
MS.gene070614.t1 | AT4G29720 | 26.306 | 536 | 288 | 18 | 159 | 597 | 2 | 527 | 2.38e-29 | 123 |
MS.gene070614.t1 | AT5G13700 | 22.791 | 430 | 269 | 16 | 187 | 589 | 30 | 423 | 1.35e-17 | 87.0 |
Find 205 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATAATGGTCACATCAATTT+TGG | 0.086176 | 8.1:+49754051 | MS.gene070614:CDS |
TACGGTTACCACACTGTTTC+TGG | 0.149077 | 8.1:+49755047 | MS.gene070614:CDS |
GTTATTGGGGCTGGCCTTGC+TGG | 0.167272 | 8.1:+49754129 | MS.gene070614:CDS |
TGCTAACCCTTTAGCGGTTT+TGG | 0.210982 | 8.1:+49754308 | MS.gene070614:CDS |
TATGGAACTCAGGAAAATTA+TGG | 0.250272 | 8.1:+49754461 | MS.gene070614:CDS |
CTATATGCAAACTACTTCTT+TGG | 0.251699 | 8.1:-49756439 | None:intergenic |
GGTTGACGAAGGGACAAATT+AGG | 0.256396 | 8.1:+49753971 | MS.gene070614:CDS |
CAAATCTTTCAGCTGCCTAT+TGG | 0.265644 | 8.1:+49754625 | MS.gene070614:CDS |
GGAATCATATATTGGCTCTT+TGG | 0.266064 | 8.1:+49753929 | MS.gene070614:CDS |
TCCCCGTTCGGCTTGAATAA+AGG | 0.269156 | 8.1:-49754375 | None:intergenic |
TAATTCAGGTTCAAAATTAA+TGG | 0.272612 | 8.1:-49754871 | None:intergenic |
AAGAGGCCTGATTTGGAATC+TGG | 0.272960 | 8.1:+49756073 | MS.gene070614:CDS |
GAAGGGACGGTTATTGTTAT+TGG | 0.282348 | 8.1:+49754114 | MS.gene070614:CDS |
AGCTGCAACTTTGTGGTATT+GGG | 0.287968 | 8.1:-49756208 | None:intergenic |
TCAATTGAGAGGATGGGTTT+TGG | 0.290843 | 8.1:+49754912 | MS.gene070614:CDS |
TGGGGCTGGCCTTGCTGGGT+TGG | 0.300615 | 8.1:+49754134 | MS.gene070614:CDS |
TTTATTCAAGAGGCCTGATT+TGG | 0.312443 | 8.1:+49756066 | MS.gene070614:CDS |
AAATCTTTCAGCTGCCTATT+GGG | 0.313650 | 8.1:+49754626 | MS.gene070614:CDS |
TGTTGTTAGGAATCATATAT+TGG | 0.316562 | 8.1:+49753921 | MS.gene070614:CDS |
GTTGTTGGGTCCTATATTCT+TGG | 0.318926 | 8.1:-49756029 | None:intergenic |
AAACCTAGGTTTGAAGCTAA+TGG | 0.326020 | 8.1:+49756315 | MS.gene070614:CDS |
AAGGGACGGTTATTGTTATT+GGG | 0.327212 | 8.1:+49754115 | MS.gene070614:CDS |
GGAAGCGATCCCCTTTCTTA+TGG | 0.332402 | 8.1:+49755797 | MS.gene070614:CDS |
TTCTTGGACAGGGACTTCTT+AGG | 0.333102 | 8.1:-49756013 | None:intergenic |
TCTGGGGTTGTCTCAGAATT+AGG | 0.333534 | 8.1:+49753874 | MS.gene070614:CDS |
AGAATGATTATGTTGTTGTT+AGG | 0.339614 | 8.1:+49753908 | MS.gene070614:CDS |
CTTGAGCATGAGATTAGATC+TGG | 0.343746 | 8.1:+49753856 | MS.gene070614:CDS |
AACCTAGGTTTGAAGCTAAT+GGG | 0.349959 | 8.1:+49756316 | MS.gene070614:CDS |
GACGTAATAGCTAGCATTGC+TGG | 0.353981 | 8.1:+49756367 | MS.gene070614:CDS |
TCAGGCACAGTGATACCTTT+AGG | 0.355103 | 8.1:-49755746 | None:intergenic |
TATCTCCTTGTAACTTTCTT+CGG | 0.357595 | 8.1:-49756173 | None:intergenic |
TTACTGAAGGAGATGAAAAT+AGG | 0.359455 | 8.1:+49756275 | MS.gene070614:CDS |
CTTCAGATGGATCTGTTTCA+AGG | 0.360488 | 8.1:+49753650 | MS.gene070614:CDS |
GTTGCTGATCACGGGTTAAC+TGG | 0.361982 | 8.1:-49755985 | None:intergenic |
CTTGGTGGGAGCGTAATTAC+TGG | 0.363012 | 8.1:+49754279 | MS.gene070614:CDS |
CTGGTACAAATTGATTGTAT+TGG | 0.363637 | 8.1:-49755770 | None:intergenic |
TGGTTATAAGGTTGTTGTTT+TGG | 0.368620 | 8.1:+49754182 | MS.gene070614:CDS |
GGGGAAGATCTGGACACATT+TGG | 0.371404 | 8.1:+49754978 | MS.gene070614:CDS |
GGGAACCGACTGTTCTTTGC+AGG | 0.371749 | 8.1:+49755884 | MS.gene070614:CDS |
GCCCTTTATTCAAGCCGAAC+GGG | 0.374137 | 8.1:+49754373 | MS.gene070614:CDS |
TATCCAAACTCTTATCAAAA+AGG | 0.375109 | 8.1:-49753735 | None:intergenic |
CCCCGTTCGGCTTGAATAAA+GGG | 0.392381 | 8.1:-49754374 | None:intergenic |
TTACGCTCCCACCAAGATCT+AGG | 0.393706 | 8.1:-49754272 | None:intergenic |
AAGCTGCAACTTTGTGGTAT+TGG | 0.395140 | 8.1:-49756209 | None:intergenic |
TCCAATCGTCTTACTTCATC+GGG | 0.395367 | 8.1:+49755130 | MS.gene070614:CDS |
TATATGCAAACTACTTCTTT+GGG | 0.396059 | 8.1:-49756438 | None:intergenic |
TGCTCAAGCAAAGCATTCAT+TGG | 0.396102 | 8.1:-49753841 | None:intergenic |
TCAGGATGATCCTTATGAAA+TGG | 0.402302 | 8.1:+49754650 | MS.gene070614:CDS |
CATGTTAGTGTGCAATCATC+TGG | 0.413221 | 8.1:+49755830 | MS.gene070614:CDS |
ACCTTATGCACCGTGCCTCT+TGG | 0.413478 | 8.1:+49754831 | MS.gene070614:CDS |
AAATTCCCAGATTCCAAATC+AGG | 0.417454 | 8.1:-49756079 | None:intergenic |
GCGATTCTGCAAATGACATT+TGG | 0.420369 | 8.1:+49756145 | MS.gene070614:CDS |
AAGTCCCTGTCCAAGAATAT+AGG | 0.421250 | 8.1:+49756019 | MS.gene070614:CDS |
AAGGGGATCGCTTCCCCATC+TGG | 0.423563 | 8.1:-49755789 | None:intergenic |
TTGCAGGTGAGGCCACTTGT+AGG | 0.423596 | 8.1:+49755900 | MS.gene070614:CDS |
CAAATTGATTGTATTGGATC+AGG | 0.423632 | 8.1:-49755764 | None:intergenic |
TTATCGACCGGCTCCCCGTT+CGG | 0.427986 | 8.1:-49754387 | None:intergenic |
TCCATATCTGATAGTGTTGA+CGG | 0.429199 | 8.1:-49754757 | None:intergenic |
TTCAGCTGCCTATTGGGATC+AGG | 0.430668 | 8.1:+49754632 | MS.gene070614:CDS |
TGGGTCCTATATTCTTGGAC+AGG | 0.433363 | 8.1:-49756024 | None:intergenic |
TCCAAGAGGCACGGTGCATA+AGG | 0.441287 | 8.1:-49754832 | None:intergenic |
TTATTGGGGCTGGCCTTGCT+GGG | 0.442326 | 8.1:+49754130 | MS.gene070614:CDS |
AATCAAATGTTCAAACTCCT+TGG | 0.448165 | 8.1:-49754004 | None:intergenic |
ATCATATATTGGCTCTTTGG+AGG | 0.451981 | 8.1:+49753932 | MS.gene070614:CDS |
GTTGACGAAGGGACAAATTA+GGG | 0.455104 | 8.1:+49753972 | MS.gene070614:CDS |
TGTCGTGCCAAAACCGCTAA+AGG | 0.456486 | 8.1:-49754315 | None:intergenic |
GAACGGGGAGCCGGTCGATA+AGG | 0.457646 | 8.1:+49754389 | MS.gene070614:CDS |
AGGATCATCCTGATCCCAAT+AGG | 0.458755 | 8.1:-49754640 | None:intergenic |
AAGTTTGCGGCCCTAGATCT+TGG | 0.458974 | 8.1:+49754261 | MS.gene070614:CDS |
ACGGTTATTGTTATTGGGGC+TGG | 0.459282 | 8.1:+49754120 | MS.gene070614:CDS |
ATGGAACTCAGGAAAATTAT+GGG | 0.459321 | 8.1:+49754462 | MS.gene070614:CDS |
ACCGTCCCTTCCGTCGCCTC+AGG | 0.459381 | 8.1:-49754102 | None:intergenic |
TAAGTTGCTTGATAAAGTTA+TGG | 0.461233 | 8.1:+49754443 | MS.gene070614:CDS |
AACTACTTCTTTGGGTCACC+GGG | 0.462636 | 8.1:-49756430 | None:intergenic |
GAGGGTGTTGAGATTATTGC+TGG | 0.462711 | 8.1:+49754783 | MS.gene070614:CDS |
CGGGTTGCGAGGTGATTGTT+CGG | 0.465694 | 8.1:-49756411 | None:intergenic |
AGGACCCAACAACGGTATCT+TGG | 0.467846 | 8.1:+49756039 | MS.gene070614:CDS |
TTAAGCGCTTTACTCATTGC+TGG | 0.468818 | 8.1:+49756340 | MS.gene070614:CDS |
ACCGTCAACACTATCAGATA+TGG | 0.473036 | 8.1:+49754756 | MS.gene070614:CDS |
TTCTCAGTTGCCTGAGGCGA+CGG | 0.473734 | 8.1:+49754092 | MS.gene070614:CDS |
AAAGGCTTGTGCAGCTTCAC+CGG | 0.474261 | 8.1:-49755096 | None:intergenic |
AAACTACTTCTTTGGGTCAC+CGG | 0.475677 | 8.1:-49756431 | None:intergenic |
TTTGATAAGAGTTTGGATAG+TGG | 0.476004 | 8.1:+49753739 | MS.gene070614:CDS |
TACAATCAATTTGTACCAGA+TGG | 0.476612 | 8.1:+49755774 | MS.gene070614:CDS |
CAGGATGATCCTTATGAAAT+GGG | 0.476783 | 8.1:+49754651 | MS.gene070614:CDS |
AGCATTGCTGGCTCCCGAAA+AGG | 0.477129 | 8.1:+49756379 | MS.gene070614:CDS |
ATCCAATCGTCTTACTTCAT+CGG | 0.478424 | 8.1:+49755129 | MS.gene070614:CDS |
ACTCGAATCAATTGAGAGGA+TGG | 0.479143 | 8.1:+49754905 | MS.gene070614:CDS |
TCATATATTGGCTCTTTGGA+GGG | 0.481204 | 8.1:+49753933 | MS.gene070614:CDS |
AGAGTATGAACCATAAGAAA+GGG | 0.481470 | 8.1:-49755807 | None:intergenic |
ATGAGAAGCAGATGTTTGAT+TGG | 0.483778 | 8.1:+49754562 | MS.gene070614:CDS |
GGACTTATTGCGCTTGTGGC+CGG | 0.486841 | 8.1:+49755077 | MS.gene070614:CDS |
TACCTCACTTGGTTCAGTCT+TGG | 0.488905 | 8.1:+49754500 | MS.gene070614:CDS |
GATTGGATCTGTGGTTTCAA+AGG | 0.490322 | 8.1:-49755114 | None:intergenic |
CACACTGTTTCTGGTGGCGC+AGG | 0.490701 | 8.1:+49755056 | MS.gene070614:CDS |
GAGAGTATGAACCATAAGAA+AGG | 0.491737 | 8.1:-49755808 | None:intergenic |
ATTAACCAAGATACCGTTGT+TGG | 0.492153 | 8.1:-49756044 | None:intergenic |
TTAACCAAGATACCGTTGTT+GGG | 0.494812 | 8.1:-49756043 | None:intergenic |
CGCAGGACTTATTGCGCTTG+TGG | 0.496869 | 8.1:+49755073 | MS.gene070614:CDS |
AATTCATGCTAACCCTTTAG+CGG | 0.497817 | 8.1:+49754302 | MS.gene070614:CDS |
GAATCTATTTCCTTATCGAC+CGG | 0.498377 | 8.1:-49754399 | None:intergenic |
GCACTTGATCAACCTGTTCA+CGG | 0.499582 | 8.1:-49756246 | None:intergenic |
GACTGCGGATCTTCTGAGAA+AGG | 0.502382 | 8.1:-49756118 | None:intergenic |
GCAACTCCTTCTTCTTCAGA+TGG | 0.503196 | 8.1:+49753637 | MS.gene070614:CDS |
TGCAGAATCGCTTTCGACTG+CGG | 0.505842 | 8.1:-49756133 | None:intergenic |
AATTTAGAATATGCAAATGC+TGG | 0.506486 | 8.1:+49754594 | MS.gene070614:CDS |
CACTTGATCAACCTGTTCAC+GGG | 0.507765 | 8.1:-49756245 | None:intergenic |
ACCCGATGAAGTAAGACGAT+TGG | 0.508363 | 8.1:-49755131 | None:intergenic |
AGGACAAGGTTGCTGATCAC+GGG | 0.510896 | 8.1:-49755993 | None:intergenic |
TTTGCAAGTGATACCTCACT+TGG | 0.512520 | 8.1:+49754489 | MS.gene070614:CDS |
TGATCACCACCCATTTCATA+AGG | 0.515455 | 8.1:-49754660 | None:intergenic |
CACTATCAGATATGGAAATG+AGG | 0.518253 | 8.1:+49754764 | MS.gene070614:CDS |
TAGGACAAGGTTGCTGATCA+CGG | 0.518479 | 8.1:-49755994 | None:intergenic |
AGTGTAAAGCTGCAACTTTG+TGG | 0.519253 | 8.1:-49756215 | None:intergenic |
GTCGTGCCAAAACCGCTAAA+GGG | 0.520176 | 8.1:-49754314 | None:intergenic |
ACAATCAATTTGTACCAGAT+GGG | 0.522386 | 8.1:+49755775 | MS.gene070614:CDS |
GCTCAAGCAAAGCATTCATT+GGG | 0.522520 | 8.1:-49753840 | None:intergenic |
CATTGGGAAACCAAGTGAAA+AGG | 0.523949 | 8.1:-49753824 | None:intergenic |
ATTCAAGCCGAACGGGGAGC+CGG | 0.525240 | 8.1:+49754380 | MS.gene070614:CDS |
AAAGCACCATGCATAGTGGC+TGG | 0.525462 | 8.1:-49755929 | None:intergenic |
CTCGAATCAATTGAGAGGAT+GGG | 0.526541 | 8.1:+49754906 | MS.gene070614:CDS |
TTGATAAAGTTATGGAACTC+AGG | 0.527973 | 8.1:+49754451 | MS.gene070614:CDS |
TGAGTATAAACTCTGCCGCC+AGG | 0.531196 | 8.1:-49754219 | None:intergenic |
ATCCCATTAGCTTCAAACCT+AGG | 0.532436 | 8.1:-49756318 | None:intergenic |
AGAGGCCTGATTTGGAATCT+GGG | 0.533383 | 8.1:+49756074 | MS.gene070614:CDS |
AATTAGGGAAACTGTGACCA+AGG | 0.533763 | 8.1:+49753987 | MS.gene070614:CDS |
TGAATAAAGGGCAATTGTCT+CGG | 0.534448 | 8.1:-49754362 | None:intergenic |
ATATATTGGCTCTTTGGAGG+GGG | 0.534556 | 8.1:+49753935 | MS.gene070614:CDS |
TACTCAGAAGGTAGGGAATG+AGG | 0.536162 | 8.1:+49754236 | MS.gene070614:CDS |
CTTTGGGTCACCGGGTTGCG+AGG | 0.537572 | 8.1:-49756422 | None:intergenic |
TGCCCTTTATTCAAGCCGAA+CGG | 0.538558 | 8.1:+49754372 | MS.gene070614:CDS |
AGAGTTTATACTCAGAAGGT+AGG | 0.540847 | 8.1:+49754228 | MS.gene070614:CDS |
ACAGATCCATCTGAAGAAGA+AGG | 0.548262 | 8.1:-49753643 | None:intergenic |
GCCTGAGGCGACGGAAGGGA+CGG | 0.549638 | 8.1:+49754101 | MS.gene070614:CDS |
CATATATTGGCTCTTTGGAG+GGG | 0.550345 | 8.1:+49753934 | MS.gene070614:CDS |
TACGCTCCCACCAAGATCTA+GGG | 0.552157 | 8.1:-49754271 | None:intergenic |
CAGTTGCCTGAGGCGACGGA+AGG | 0.552556 | 8.1:+49754096 | MS.gene070614:CDS |
TTGCGGCCCTAGATCTTGGT+GGG | 0.554431 | 8.1:+49754265 | MS.gene070614:CDS |
ATGCATGGTGCTTTCATGAG+TGG | 0.555512 | 8.1:+49755938 | MS.gene070614:CDS |
AGGGAATGAGGATAAGTTTG+CGG | 0.556544 | 8.1:+49754248 | MS.gene070614:CDS |
TTTGCGGCCCTAGATCTTGG+TGG | 0.559575 | 8.1:+49754264 | MS.gene070614:CDS |
AAGTAAGACGATTGGATCTG+TGG | 0.560027 | 8.1:-49755123 | None:intergenic |
CGATAAGGAAATAGATTCAA+AGG | 0.561482 | 8.1:+49754404 | MS.gene070614:CDS |
ATTCTGCAAATGACATTTGG+TGG | 0.561799 | 8.1:+49756148 | MS.gene070614:CDS |
AGGGACGGTTATTGTTATTG+GGG | 0.563624 | 8.1:+49754116 | MS.gene070614:CDS |
TTGAGCATGAGATTAGATCT+GGG | 0.564471 | 8.1:+49753857 | MS.gene070614:CDS |
CCCTTTATTCAAGCCGAACG+GGG | 0.565166 | 8.1:+49754374 | MS.gene070614:CDS |
TTGGAAGGTAGGAACCGTCC+TGG | 0.566335 | 8.1:+49754201 | MS.gene070614:CDS |
TCTTGGTTAATTTATTCAAG+AGG | 0.566827 | 8.1:+49756056 | MS.gene070614:CDS |
ACGAAAATAGTCATGATCGT+GGG | 0.568316 | 8.1:+49755009 | MS.gene070614:CDS |
GACAGGGACTTCTTAGGACA+AGG | 0.571305 | 8.1:-49756007 | None:intergenic |
GAGTTTATACTCAGAAGGTA+GGG | 0.571675 | 8.1:+49754229 | MS.gene070614:CDS |
CAATATCCAGCCACTATGCA+TGG | 0.572430 | 8.1:+49755923 | MS.gene070614:CDS |
ACTATCAGATATGGAAATGA+GGG | 0.572545 | 8.1:+49754765 | MS.gene070614:CDS |
CATGAAAGCACCATGCATAG+TGG | 0.574553 | 8.1:-49755933 | None:intergenic |
TTGATAAAAGCTATGTGTGA+AGG | 0.575558 | 8.1:+49754711 | MS.gene070614:CDS |
GCTTCTGAACAAAATTGCAA+TGG | 0.575771 | 8.1:+49754935 | MS.gene070614:CDS |
AACTCAGGAAAATTATGGGT+GGG | 0.576931 | 8.1:+49754466 | MS.gene070614:CDS |
CGGCAGAGTTTATACTCAGA+AGG | 0.577671 | 8.1:+49754224 | MS.gene070614:CDS |
GGGTCCTATATTCTTGGACA+GGG | 0.585909 | 8.1:-49756023 | None:intergenic |
CCGACTGTTCTTTGCAGGTG+AGG | 0.588042 | 8.1:+49755889 | MS.gene070614:CDS |
GATATACTTGCAGAAAACGT+GGG | 0.595731 | 8.1:+49755863 | MS.gene070614:CDS |
GGCAATCATAGCCTCCGTGT+TGG | 0.597313 | 8.1:-49753803 | None:intergenic |
TGATATACTTGCAGAAAACG+TGG | 0.598569 | 8.1:+49755862 | MS.gene070614:CDS |
AGTTGCCTGAGGCGACGGAA+GGG | 0.604727 | 8.1:+49754097 | MS.gene070614:CDS |
TTGCTGGGTTGGCTGCAGCG+AGG | 0.604891 | 8.1:+49754145 | MS.gene070614:CDS |
GGGTTGTCTCAGAATTAGGC+GGG | 0.606213 | 8.1:+49753878 | MS.gene070614:CDS |
GGTTACCACACTGTTTCTGG+TGG | 0.606726 | 8.1:+49755050 | MS.gene070614:CDS |
GTTAGGAGGTGGTTGACGAA+GGG | 0.608353 | 8.1:+49753961 | MS.gene070614:CDS |
TCGCTGCAGCCAACCCAGCA+AGG | 0.608445 | 8.1:-49754143 | None:intergenic |
CGAAAATAGTCATGATCGTG+GGG | 0.610184 | 8.1:+49755010 | MS.gene070614:CDS |
CAATCAATTTGTACCAGATG+GGG | 0.610975 | 8.1:+49755776 | MS.gene070614:CDS |
GGCTGGATATTGCCTACAAG+TGG | 0.610990 | 8.1:-49755912 | None:intergenic |
GAAAACTCGAATCAATTGAG+AGG | 0.612634 | 8.1:+49754901 | MS.gene070614:CDS |
CTCCAAGACTGAACCAAGTG+AGG | 0.615073 | 8.1:-49754502 | None:intergenic |
GTTTACTTCTCAGTTGCCTG+AGG | 0.615221 | 8.1:+49754086 | MS.gene070614:CDS |
CGAACAATCACCTCGCAACC+CGG | 0.615431 | 8.1:+49756412 | MS.gene070614:CDS |
TATAAACTCTGCCGCCAGGA+CGG | 0.618038 | 8.1:-49754215 | None:intergenic |
TGTTAGGAGGTGGTTGACGA+AGG | 0.619625 | 8.1:+49753960 | MS.gene070614:CDS |
GAACTCAGGAAAATTATGGG+TGG | 0.620564 | 8.1:+49754465 | MS.gene070614:CDS |
CAAGTGCAGCAAATTACTGA+AGG | 0.627123 | 8.1:+49756262 | MS.gene070614:CDS |
ACTCAAGAATTTATATGCGG+TGG | 0.627955 | 8.1:+49754527 | MS.gene070614:CDS |
TTTCAGAACTCCAAGAGGCA+CGG | 0.631927 | 8.1:-49754841 | None:intergenic |
AGGGTGTTGAGATTATTGCT+GGG | 0.635301 | 8.1:+49754784 | MS.gene070614:CDS |
AACGAAAATAGTCATGATCG+TGG | 0.635661 | 8.1:+49755008 | MS.gene070614:CDS |
CTGGCTCCCGAAAAGGAAGG+AGG | 0.640127 | 8.1:+49756386 | MS.gene070614:CDS |
TTGTCTCGGACTTTATGAAG+CGG | 0.650292 | 8.1:-49754348 | None:intergenic |
GGGGTTGTCTCAGAATTAGG+CGG | 0.650971 | 8.1:+49753877 | MS.gene070614:CDS |
CCTCACCTGCAAAGAACAGT+CGG | 0.652793 | 8.1:-49755889 | None:intergenic |
AATTATCGTAGTTACGACGA+GGG | 0.656144 | 8.1:+49753697 | MS.gene070614:CDS |
GAGTATGAACCATAAGAAAG+GGG | 0.659942 | 8.1:-49755806 | None:intergenic |
TTGCTGGCTCCCGAAAAGGA+AGG | 0.662888 | 8.1:+49756383 | MS.gene070614:CDS |
TGGTACCGAAGAAAGTTACA+AGG | 0.666856 | 8.1:+49756168 | MS.gene070614:CDS |
TGAGCATGAGATTAGATCTG+GGG | 0.673661 | 8.1:+49753858 | MS.gene070614:CDS |
GGGTGTTGAGATTATTGCTG+GGG | 0.673661 | 8.1:+49754785 | MS.gene070614:CDS |
GACACTCAAGAATTTATATG+CGG | 0.675104 | 8.1:+49754524 | MS.gene070614:CDS |
ATATACTTGCAGAAAACGTG+GGG | 0.688410 | 8.1:+49755864 | MS.gene070614:CDS |
GAATTATCGTAGTTACGACG+AGG | 0.695078 | 8.1:+49753696 | MS.gene070614:CDS |
GAAGGTAGGAACCGTCCTGG+CGG | 0.707193 | 8.1:+49754204 | MS.gene070614:CDS |
GGCAACTGAGAAGTAAACGA+CGG | 0.708462 | 8.1:-49754081 | None:intergenic |
CTGCGCCACCAGAAACAGTG+TGG | 0.728799 | 8.1:-49755055 | None:intergenic |
AAGAATATAGGACCCAACAA+CGG | 0.742770 | 8.1:+49756031 | MS.gene070614:CDS |
GATGATCCTTATGAAATGGG+TGG | 0.747125 | 8.1:+49754654 | MS.gene070614:CDS |
TATTCAGAAAGAAACCAACA+CGG | 0.760530 | 8.1:+49753789 | MS.gene070614:CDS |
TCAGAAAGAAACCAACACGG+AGG | 0.771882 | 8.1:+49753792 | MS.gene070614:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTTTATTTTTTTCTG+AGG | + | chr8.1:49755518-49755537 | MS.gene070614:intron | 10.0% |
!!! | CAATTTATATATTTTTCTAC+AGG | + | chr8.1:49755713-49755732 | MS.gene070614:intron | 15.0% |
!!! | TCACATGATTTTAATTTATT+TGG | + | chr8.1:49755402-49755421 | MS.gene070614:intron | 15.0% |
!! | CACTGTTAAAAAAAAAAATG+TGG | + | chr8.1:49755680-49755699 | MS.gene070614:intron | 20.0% |
!! | GGTTGTTCATTAAATTATAT+GGG | + | chr8.1:49755189-49755208 | MS.gene070614:intron | 20.0% |
!! | TGGTTGTTCATTAAATTATA+TGG | + | chr8.1:49755188-49755207 | MS.gene070614:intron | 20.0% |
!!! | TAATTCAGGTTCAAAATTAA+TGG | - | chr8.1:49754874-49754893 | None:intergenic | 20.0% |
!!! | TATGACTATCTTTTGTATAA+TGG | + | chr8.1:49754036-49754055 | MS.gene070614:CDS | 20.0% |
! | ATCAAATAACACCTAAAACA+GGG | - | chr8.1:49755243-49755262 | None:intergenic | 25.0% |
! | TAAGTTGCTTGATAAAGTTA+TGG | + | chr8.1:49754443-49754462 | MS.gene070614:CDS | 25.0% |
! | TATCAAATAACACCTAAAAC+AGG | - | chr8.1:49755244-49755263 | None:intergenic | 25.0% |
! | TATCCAAACTCTTATCAAAA+AGG | - | chr8.1:49753738-49753757 | None:intergenic | 25.0% |
! | TCATATTTGACAAAAAACCT+AGG | + | chr8.1:49756301-49756320 | MS.gene070614:CDS | 25.0% |
! | TCTTGGTTAATTTATTCAAG+AGG | + | chr8.1:49756056-49756075 | MS.gene070614:CDS | 25.0% |
! | TGTTGTTAGGAATCATATAT+TGG | + | chr8.1:49753921-49753940 | MS.gene070614:CDS | 25.0% |
!! | AATTTAGAATATGCAAATGC+TGG | + | chr8.1:49754594-49754613 | MS.gene070614:CDS | 25.0% |
!! | ACGGTCTTTTCATAAAAAAT+AGG | - | chr8.1:49754741-49754760 | None:intergenic | 25.0% |
!! | AGAATGATTATGTTGTTGTT+AGG | + | chr8.1:49753908-49753927 | MS.gene070614:CDS | 25.0% |
!! | ATAATGGTCACATCAATTTT+GGG | + | chr8.1:49754052-49754071 | MS.gene070614:CDS | 25.0% |
!! | TATAATGGTCACATCAATTT+TGG | + | chr8.1:49754051-49754070 | MS.gene070614:CDS | 25.0% |
!! | TGTGATTCATATTGATGATA+TGG | - | chr8.1:49755387-49755406 | None:intergenic | 25.0% |
!!! | GTTTTAGGTGTTATTTGATA+GGG | + | chr8.1:49755244-49755263 | MS.gene070614:intron | 25.0% |
!!! | TGTTTTAGGTGTTATTTGAT+AGG | + | chr8.1:49755243-49755262 | MS.gene070614:intron | 25.0% |
!!! | TTATTTTTTTCTGAGGCTTA+TGG | + | chr8.1:49755525-49755544 | MS.gene070614:intron | 25.0% |
!!! | TTGTACGATTTGATTTGATT+TGG | + | chr8.1:49755287-49755306 | MS.gene070614:intron | 25.0% |
AATCAAATGTTCAAACTCCT+TGG | - | chr8.1:49754007-49754026 | None:intergenic | 30.0% | |
AATTGTGAGCTAGAAATTGA+GGG | - | chr8.1:49755563-49755582 | None:intergenic | 30.0% | |
ACAATCAATTTGTACCAGAT+GGG | + | chr8.1:49755775-49755794 | MS.gene070614:CDS | 30.0% | |
ACTATCAGATATGGAAATGA+GGG | + | chr8.1:49754765-49754784 | MS.gene070614:CDS | 30.0% | |
AGAGTATGAACCATAAGAAA+GGG | - | chr8.1:49755810-49755829 | None:intergenic | 30.0% | |
ATGGAACTCAGGAAAATTAT+GGG | + | chr8.1:49754462-49754481 | MS.gene070614:CDS | 30.0% | |
CAAATTGATTGTATTGGATC+AGG | - | chr8.1:49755767-49755786 | None:intergenic | 30.0% | |
CGATAAGGAAATAGATTCAA+AGG | + | chr8.1:49754404-49754423 | MS.gene070614:CDS | 30.0% | |
CTGGTACAAATTGATTGTAT+TGG | - | chr8.1:49755773-49755792 | None:intergenic | 30.0% | |
CTTACCATGTGAAACTTATT+TGG | + | chr8.1:49755451-49755470 | MS.gene070614:intron | 30.0% | |
GACACTCAAGAATTTATATG+CGG | + | chr8.1:49754524-49754543 | MS.gene070614:CDS | 30.0% | |
TAATTGTGAGCTAGAAATTG+AGG | - | chr8.1:49755564-49755583 | None:intergenic | 30.0% | |
TACAATCAATTTGTACCAGA+TGG | + | chr8.1:49755774-49755793 | MS.gene070614:CDS | 30.0% | |
TATCTCCTTGTAACTTTCTT+CGG | - | chr8.1:49756176-49756195 | None:intergenic | 30.0% | |
TATGGAACTCAGGAAAATTA+TGG | + | chr8.1:49754461-49754480 | MS.gene070614:CDS | 30.0% | |
TATTCAGAAAGAAACCAACA+CGG | + | chr8.1:49753789-49753808 | MS.gene070614:CDS | 30.0% | |
TCAAATAACACCTAAAACAG+GGG | - | chr8.1:49755242-49755261 | None:intergenic | 30.0% | |
TTACTGAAGGAGATGAAAAT+AGG | + | chr8.1:49756275-49756294 | MS.gene070614:CDS | 30.0% | |
TTGATAAAAGCTATGTGTGA+AGG | + | chr8.1:49754711-49754730 | MS.gene070614:CDS | 30.0% | |
TTGATAAAGTTATGGAACTC+AGG | + | chr8.1:49754451-49754470 | MS.gene070614:CDS | 30.0% | |
TTTGATAAGAGTTTGGATAG+TGG | + | chr8.1:49753739-49753758 | MS.gene070614:CDS | 30.0% | |
! | TAATGGTCACATCAATTTTG+GGG | + | chr8.1:49754053-49754072 | MS.gene070614:CDS | 30.0% |
! | TGACCTTTTTGATAAGAGTT+TGG | + | chr8.1:49753732-49753751 | MS.gene070614:CDS | 30.0% |
!! | ACAGGTATTTTTCAACCTAA+AGG | + | chr8.1:49755731-49755750 | MS.gene070614:intron | 30.0% |
!!! | GGGGAGTTCTTTTTATTTTA+CGG | + | chr8.1:49755029-49755048 | MS.gene070614:CDS | 30.0% |
!!! | TATAAGGTTGTTGTTTTGGA+AGG | + | chr8.1:49754186-49754205 | MS.gene070614:CDS | 30.0% |
!!! | TGGTTATAAGGTTGTTGTTT+TGG | + | chr8.1:49754182-49754201 | MS.gene070614:CDS | 30.0% |
AAATAACACCTAAAACAGGG+GGG | - | chr8.1:49755240-49755259 | None:intergenic | 35.0% | |
AAATCTTTCAGCTGCCTATT+GGG | + | chr8.1:49754626-49754645 | MS.gene070614:CDS | 35.0% | |
AAATTCCCAGATTCCAAATC+AGG | - | chr8.1:49756082-49756101 | None:intergenic | 35.0% | |
AACGAAAATAGTCATGATCG+TGG | + | chr8.1:49755008-49755027 | MS.gene070614:CDS | 35.0% | |
AACTCAGGAAAATTATGGGT+GGG | + | chr8.1:49754466-49754485 | MS.gene070614:CDS | 35.0% | |
AAGAATATAGGACCCAACAA+CGG | + | chr8.1:49756031-49756050 | MS.gene070614:CDS | 35.0% | |
AATTATCGTAGTTACGACGA+GGG | + | chr8.1:49753697-49753716 | MS.gene070614:CDS | 35.0% | |
AATTCATGCTAACCCTTTAG+CGG | + | chr8.1:49754302-49754321 | MS.gene070614:CDS | 35.0% | |
ACGAAAATAGTCATGATCGT+GGG | + | chr8.1:49755009-49755028 | MS.gene070614:CDS | 35.0% | |
ACTCAAGAATTTATATGCGG+TGG | + | chr8.1:49754527-49754546 | MS.gene070614:CDS | 35.0% | |
AGAGTTTATACTCAGAAGGT+AGG | + | chr8.1:49754228-49754247 | MS.gene070614:CDS | 35.0% | |
ATATACTTGCAGAAAACGTG+GGG | + | chr8.1:49755864-49755883 | MS.gene070614:CDS | 35.0% | |
ATCCAATCGTCTTACTTCAT+CGG | + | chr8.1:49755129-49755148 | MS.gene070614:CDS | 35.0% | |
ATCGCCAAATAAGTTTCACA+TGG | - | chr8.1:49755458-49755477 | None:intergenic | 35.0% | |
ATGAGAAGCAGATGTTTGAT+TGG | + | chr8.1:49754562-49754581 | MS.gene070614:CDS | 35.0% | |
ATTAACCAAGATACCGTTGT+TGG | - | chr8.1:49756047-49756066 | None:intergenic | 35.0% | |
ATTCTGCAAATGACATTTGG+TGG | + | chr8.1:49756148-49756167 | MS.gene070614:CDS | 35.0% | |
ATTGTGAGCTAGAAATTGAG+GGG | - | chr8.1:49755562-49755581 | None:intergenic | 35.0% | |
CAAATAACACCTAAAACAGG+GGG | - | chr8.1:49755241-49755260 | None:intergenic | 35.0% | |
CAATCAATTTGTACCAGATG+GGG | + | chr8.1:49755776-49755795 | MS.gene070614:CDS | 35.0% | |
CACTATCAGATATGGAAATG+AGG | + | chr8.1:49754764-49754783 | MS.gene070614:CDS | 35.0% | |
CAGGATGATCCTTATGAAAT+GGG | + | chr8.1:49754651-49754670 | MS.gene070614:CDS | 35.0% | |
GAAAACTCGAATCAATTGAG+AGG | + | chr8.1:49754901-49754920 | MS.gene070614:CDS | 35.0% | |
GAATCTATTTCCTTATCGAC+CGG | - | chr8.1:49754402-49754421 | None:intergenic | 35.0% | |
GAGTATGAACCATAAGAAAG+GGG | - | chr8.1:49755809-49755828 | None:intergenic | 35.0% | |
GAGTTTATACTCAGAAGGTA+GGG | + | chr8.1:49754229-49754248 | MS.gene070614:CDS | 35.0% | |
GATATACTTGCAGAAAACGT+GGG | + | chr8.1:49755863-49755882 | MS.gene070614:CDS | 35.0% | |
GCTTCTGAACAAAATTGCAA+TGG | + | chr8.1:49754935-49754954 | MS.gene070614:CDS | 35.0% | |
TCAGGATGATCCTTATGAAA+TGG | + | chr8.1:49754650-49754669 | MS.gene070614:CDS | 35.0% | |
TGAATAAAGGGCAATTGTCT+CGG | - | chr8.1:49754365-49754384 | None:intergenic | 35.0% | |
TGATATACTTGCAGAAAACG+TGG | + | chr8.1:49755862-49755881 | MS.gene070614:CDS | 35.0% | |
TTAACCAAGATACCGTTGTT+GGG | - | chr8.1:49756046-49756065 | None:intergenic | 35.0% | |
TTGAGCATGAGATTAGATCT+GGG | + | chr8.1:49753857-49753876 | MS.gene070614:CDS | 35.0% | |
TTTATTCAAGAGGCCTGATT+TGG | + | chr8.1:49756066-49756085 | MS.gene070614:CDS | 35.0% | |
! | AAACCTAGGTTTGAAGCTAA+TGG | + | chr8.1:49756315-49756334 | MS.gene070614:CDS | 35.0% |
! | AACCTAGGTTTGAAGCTAAT+GGG | + | chr8.1:49756316-49756335 | MS.gene070614:CDS | 35.0% |
! | AAGGGACGGTTATTGTTATT+GGG | + | chr8.1:49754115-49754134 | MS.gene070614:CDS | 35.0% |
! | AGTTTTCTTGCAGGTAATTC+AGG | - | chr8.1:49754888-49754907 | None:intergenic | 35.0% |
! | GAGAGTATGAACCATAAGAA+AGG | - | chr8.1:49755811-49755830 | None:intergenic | 35.0% |
! | GGTTTTTCCACATGTGTTTT+GGG | + | chr8.1:49754956-49754975 | MS.gene070614:CDS | 35.0% |
! | GTTTTTCCACATGTGTTTTG+GGG | + | chr8.1:49754957-49754976 | MS.gene070614:CDS | 35.0% |
! | TCCATATCTGATAGTGTTGA+CGG | - | chr8.1:49754760-49754779 | None:intergenic | 35.0% |
! | TGGTTTTTCCACATGTGTTT+TGG | + | chr8.1:49754955-49754974 | MS.gene070614:CDS | 35.0% |
!! | ATCATATATTGGCTCTTTGG+AGG | + | chr8.1:49753932-49753951 | MS.gene070614:CDS | 35.0% |
!! | GCTTTTGTCGTTTGGTTATA+AGG | + | chr8.1:49754170-49754189 | MS.gene070614:CDS | 35.0% |
!! | GGAATCATATATTGGCTCTT+TGG | + | chr8.1:49753929-49753948 | MS.gene070614:CDS | 35.0% |
!! | TCATATATTGGCTCTTTGGA+GGG | + | chr8.1:49753933-49753952 | MS.gene070614:CDS | 35.0% |
!! | TCTTGGAGTTCTGAAAAAGA+AGG | + | chr8.1:49754848-49754867 | MS.gene070614:CDS | 35.0% |
!! | TTTTTCCACATGTGTTTTGG+GGG | + | chr8.1:49754958-49754977 | MS.gene070614:CDS | 35.0% |
!!! | ATTGATTCGAGTTTTCTTGC+AGG | - | chr8.1:49754897-49754916 | None:intergenic | 35.0% |
!!! | TTCTTTTTCAGAACTCCAAG+AGG | - | chr8.1:49754849-49754868 | None:intergenic | 35.0% |
AAGCTGCAACTTTGTGGTAT+TGG | - | chr8.1:49756212-49756231 | None:intergenic | 40.0% | |
AAGTAAGACGATTGGATCTG+TGG | - | chr8.1:49755126-49755145 | None:intergenic | 40.0% | |
AAGTCCCTGTCCAAGAATAT+AGG | + | chr8.1:49756019-49756038 | MS.gene070614:CDS | 40.0% | |
AATAACACCTAAAACAGGGG+GGG | - | chr8.1:49755239-49755258 | None:intergenic | 40.0% | |
AATTAGGGAAACTGTGACCA+AGG | + | chr8.1:49753987-49754006 | MS.gene070614:CDS | 40.0% | |
ACAGATCCATCTGAAGAAGA+AGG | - | chr8.1:49753646-49753665 | None:intergenic | 40.0% | |
ACCGTCAACACTATCAGATA+TGG | + | chr8.1:49754756-49754775 | MS.gene070614:CDS | 40.0% | |
ACTCGAATCAATTGAGAGGA+TGG | + | chr8.1:49754905-49754924 | MS.gene070614:CDS | 40.0% | |
AGCTGCAACTTTGTGGTATT+GGG | - | chr8.1:49756211-49756230 | None:intergenic | 40.0% | |
AGGGAATGAGGATAAGTTTG+CGG | + | chr8.1:49754248-49754267 | MS.gene070614:CDS | 40.0% | |
AGTGTAAAGCTGCAACTTTG+TGG | - | chr8.1:49756218-49756237 | None:intergenic | 40.0% | |
CAAATCTTTCAGCTGCCTAT+TGG | + | chr8.1:49754625-49754644 | MS.gene070614:CDS | 40.0% | |
CAAGTGCAGCAAATTACTGA+AGG | + | chr8.1:49756262-49756281 | MS.gene070614:CDS | 40.0% | |
CATGTTAGTGTGCAATCATC+TGG | + | chr8.1:49755830-49755849 | MS.gene070614:CDS | 40.0% | |
CATTGGGAAACCAAGTGAAA+AGG | - | chr8.1:49753827-49753846 | None:intergenic | 40.0% | |
CGAAAATAGTCATGATCGTG+GGG | + | chr8.1:49755010-49755029 | MS.gene070614:CDS | 40.0% | |
CTCGAATCAATTGAGAGGAT+GGG | + | chr8.1:49754906-49754925 | MS.gene070614:CDS | 40.0% | |
CTTCAGATGGATCTGTTTCA+AGG | + | chr8.1:49753650-49753669 | MS.gene070614:CDS | 40.0% | |
CTTGAGCATGAGATTAGATC+TGG | + | chr8.1:49753856-49753875 | MS.gene070614:CDS | 40.0% | |
GAACAACCACAATAAGAGAG+AGG | - | chr8.1:49755177-49755196 | None:intergenic | 40.0% | |
GAACTCAGGAAAATTATGGG+TGG | + | chr8.1:49754465-49754484 | MS.gene070614:CDS | 40.0% | |
GAAGGGACGGTTATTGTTAT+TGG | + | chr8.1:49754114-49754133 | MS.gene070614:CDS | 40.0% | |
GAATTATCGTAGTTACGACG+AGG | + | chr8.1:49753696-49753715 | MS.gene070614:CDS | 40.0% | |
GATGATCCTTATGAAATGGG+TGG | + | chr8.1:49754654-49754673 | MS.gene070614:CDS | 40.0% | |
GATTGGATCTGTGGTTTCAA+AGG | - | chr8.1:49755117-49755136 | None:intergenic | 40.0% | |
GCGATTCTGCAAATGACATT+TGG | + | chr8.1:49756145-49756164 | MS.gene070614:CDS | 40.0% | |
GTTGACGAAGGGACAAATTA+GGG | + | chr8.1:49753972-49753991 | MS.gene070614:CDS | 40.0% | |
GTTGTTGGGTCCTATATTCT+TGG | - | chr8.1:49756032-49756051 | None:intergenic | 40.0% | |
TCACATGGTAAGCAAGTGAA+TGG | - | chr8.1:49755443-49755462 | None:intergenic | 40.0% | |
TCCAATCGTCTTACTTCATC+GGG | + | chr8.1:49755130-49755149 | MS.gene070614:CDS | 40.0% | |
TGAGCATGAGATTAGATCTG+GGG | + | chr8.1:49753858-49753877 | MS.gene070614:CDS | 40.0% | |
TGATCACCACCCATTTCATA+AGG | - | chr8.1:49754663-49754682 | None:intergenic | 40.0% | |
TTAAGCGCTTTACTCATTGC+TGG | + | chr8.1:49756340-49756359 | MS.gene070614:CDS | 40.0% | |
TTGTCTCGGACTTTATGAAG+CGG | - | chr8.1:49754351-49754370 | None:intergenic | 40.0% | |
TTGTGAGCTAGAAATTGAGG+GGG | - | chr8.1:49755561-49755580 | None:intergenic | 40.0% | |
TTTGCAAGTGATACCTCACT+TGG | + | chr8.1:49754489-49754508 | MS.gene070614:CDS | 40.0% | |
! | AAGGTACCTCTCTCTTATTG+TGG | + | chr8.1:49755168-49755187 | MS.gene070614:intron | 40.0% |
! | AGGGACGGTTATTGTTATTG+GGG | + | chr8.1:49754116-49754135 | MS.gene070614:CDS | 40.0% |
! | ATCCCATTAGCTTCAAACCT+AGG | - | chr8.1:49756321-49756340 | None:intergenic | 40.0% |
! | CACTATTTTATCCCGTGAAC+AGG | + | chr8.1:49756234-49756253 | MS.gene070614:CDS | 40.0% |
! | GATCATTGTTTTCTTGCTGG+AGG | + | chr8.1:49754678-49754697 | MS.gene070614:CDS | 40.0% |
! | GCACTTTGACTTATGATGCA+TGG | + | chr8.1:49755493-49755512 | MS.gene070614:intron | 40.0% |
! | GCTATGATTGCCTTTTCACT+TGG | + | chr8.1:49753814-49753833 | MS.gene070614:CDS | 40.0% |
! | GCTCAAGCAAAGCATTCATT+GGG | - | chr8.1:49753843-49753862 | None:intergenic | 40.0% |
! | GGTGATCATTGTTTTCTTGC+TGG | + | chr8.1:49754675-49754694 | MS.gene070614:CDS | 40.0% |
! | GTTTTCTTGCTGGAGGAAAT+TGG | + | chr8.1:49754685-49754704 | MS.gene070614:CDS | 40.0% |
! | TGCTCAAGCAAAGCATTCAT+TGG | - | chr8.1:49753844-49753863 | None:intergenic | 40.0% |
! | TGGTACCGAAGAAAGTTACA+AGG | + | chr8.1:49756168-49756187 | MS.gene070614:CDS | 40.0% |
!! | AGGGTGTTGAGATTATTGCT+GGG | + | chr8.1:49754784-49754803 | MS.gene070614:CDS | 40.0% |
!! | ATATATTGGCTCTTTGGAGG+GGG | + | chr8.1:49753935-49753954 | MS.gene070614:CDS | 40.0% |
!! | CAATTGAGAGGATGGGTTTT+GGG | + | chr8.1:49754913-49754932 | MS.gene070614:CDS | 40.0% |
!! | CATATATTGGCTCTTTGGAG+GGG | + | chr8.1:49753934-49753953 | MS.gene070614:CDS | 40.0% |
!! | TCAATTGAGAGGATGGGTTT+TGG | + | chr8.1:49754912-49754931 | MS.gene070614:CDS | 40.0% |
!! | TTTTCCACATGTGTTTTGGG+GGG | + | chr8.1:49754959-49754978 | MS.gene070614:CDS | 40.0% |
!!! | AGGTTGTTGTTTTGGAAGGT+AGG | + | chr8.1:49754190-49754209 | MS.gene070614:CDS | 40.0% |
!!! | CGGGTTTTGAACACTCTAAA+AGG | + | chr8.1:49755149-49755168 | MS.gene070614:CDS | 40.0% |
ACCCGATGAAGTAAGACGAT+TGG | - | chr8.1:49755134-49755153 | None:intergenic | 45.0% | |
AGGATCATCCTGATCCCAAT+AGG | - | chr8.1:49754643-49754662 | None:intergenic | 45.0% | |
ATGCATGGTGCTTTCATGAG+TGG | + | chr8.1:49755938-49755957 | MS.gene070614:CDS | 45.0% | |
CAATATCCAGCCACTATGCA+TGG | + | chr8.1:49755923-49755942 | MS.gene070614:CDS | 45.0% | |
CACTTGATCAACCTGTTCAC+GGG | - | chr8.1:49756248-49756267 | None:intergenic | 45.0% | |
CGGCAGAGTTTATACTCAGA+AGG | + | chr8.1:49754224-49754243 | MS.gene070614:CDS | 45.0% | |
GACGTAATAGCTAGCATTGC+TGG | + | chr8.1:49756367-49756386 | MS.gene070614:CDS | 45.0% | |
GCAACTCCTTCTTCTTCAGA+TGG | + | chr8.1:49753637-49753656 | MS.gene070614:CDS | 45.0% | |
GCACTTGATCAACCTGTTCA+CGG | - | chr8.1:49756249-49756268 | None:intergenic | 45.0% | |
GGCAACTGAGAAGTAAACGA+CGG | - | chr8.1:49754084-49754103 | None:intergenic | 45.0% | |
GGGGAAGGAAAATGTGCAAA+AGG | - | chr8.1:49755220-49755239 | None:intergenic | 45.0% | |
GGGTCCTATATTCTTGGACA+GGG | - | chr8.1:49756026-49756045 | None:intergenic | 45.0% | |
GGTTGACGAAGGGACAAATT+AGG | + | chr8.1:49753971-49753990 | MS.gene070614:CDS | 45.0% | |
GTTTACTTCTCAGTTGCCTG+AGG | + | chr8.1:49754086-49754105 | MS.gene070614:CDS | 45.0% | |
TACCTCACTTGGTTCAGTCT+TGG | + | chr8.1:49754500-49754519 | MS.gene070614:CDS | 45.0% | |
TACGGTTACCACACTGTTTC+TGG | + | chr8.1:49755047-49755066 | MS.gene070614:CDS | 45.0% | |
TACTCAGAAGGTAGGGAATG+AGG | + | chr8.1:49754236-49754255 | MS.gene070614:CDS | 45.0% | |
TAGGACAAGGTTGCTGATCA+CGG | - | chr8.1:49755997-49756016 | None:intergenic | 45.0% | |
TCAGAAAGAAACCAACACGG+AGG | + | chr8.1:49753792-49753811 | MS.gene070614:CDS | 45.0% | |
TCAGGCACAGTGATACCTTT+AGG | - | chr8.1:49755749-49755768 | None:intergenic | 45.0% | |
TGCCCTTTATTCAAGCCGAA+CGG | + | chr8.1:49754372-49754391 | MS.gene070614:CDS | 45.0% | |
TGGGTCCTATATTCTTGGAC+AGG | - | chr8.1:49756027-49756046 | None:intergenic | 45.0% | |
TGGTAAGCAAGTGAATGGAG+AGG | - | chr8.1:49755438-49755457 | None:intergenic | 45.0% | |
TGTGAGCTAGAAATTGAGGG+GGG | - | chr8.1:49755560-49755579 | None:intergenic | 45.0% | |
TTCTTGGACAGGGACTTCTT+AGG | - | chr8.1:49756016-49756035 | None:intergenic | 45.0% | |
TTTCAGAACTCCAAGAGGCA+CGG | - | chr8.1:49754844-49754863 | None:intergenic | 45.0% | |
! | ACGGTTATTGTTATTGGGGC+TGG | + | chr8.1:49754120-49754139 | MS.gene070614:CDS | 45.0% |
! | TCTGGGGTTGTCTCAGAATT+AGG | + | chr8.1:49753874-49753893 | MS.gene070614:CDS | 45.0% |
! | TGCTAACCCTTTAGCGGTTT+TGG | + | chr8.1:49754308-49754327 | MS.gene070614:CDS | 45.0% |
! | TTCGGTTCCTCCTTCCTTTT+CGG | - | chr8.1:49756396-49756415 | None:intergenic | 45.0% |
!! | AAGAGGCCTGATTTGGAATC+TGG | + | chr8.1:49756073-49756092 | MS.gene070614:CDS | 45.0% |
!! | AGAGGCCTGATTTGGAATCT+GGG | + | chr8.1:49756074-49756093 | MS.gene070614:CDS | 45.0% |
!! | CATGAAAGCACCATGCATAG+TGG | - | chr8.1:49755936-49755955 | None:intergenic | 45.0% |
!! | GAGGGTGTTGAGATTATTGC+TGG | + | chr8.1:49754783-49754802 | MS.gene070614:CDS | 45.0% |
!! | GGGTGTTGAGATTATTGCTG+GGG | + | chr8.1:49754785-49754804 | MS.gene070614:CDS | 45.0% |
!! | TTCAATAAAAAAATATTTAA+TGG | - | chr8.1:49755600-49755619 | None:intergenic | 5.0% |
AAAGGCTTGTGCAGCTTCAC+CGG | - | chr8.1:49755099-49755118 | None:intergenic | 50.0% | |
AAGTTTGCGGCCCTAGATCT+TGG | + | chr8.1:49754261-49754280 | MS.gene070614:CDS | 50.0% | |
AGGACAAGGTTGCTGATCAC+GGG | - | chr8.1:49755996-49756015 | None:intergenic | 50.0% | |
AGGACCCAACAACGGTATCT+TGG | + | chr8.1:49756039-49756058 | MS.gene070614:CDS | 50.0% | |
CCCTTTATTCAAGCCGAACG+GGG | + | chr8.1:49754374-49754393 | MS.gene070614:CDS | 50.0% | |
CCTCACCTGCAAAGAACAGT+CGG | - | chr8.1:49755892-49755911 | None:intergenic | 50.0% | |
CTCCAAGACTGAACCAAGTG+AGG | - | chr8.1:49754505-49754524 | None:intergenic | 50.0% | |
GACAGGGACTTCTTAGGACA+AGG | - | chr8.1:49756010-49756029 | None:intergenic | 50.0% | |
GCCCTTTATTCAAGCCGAAC+GGG | + | chr8.1:49754373-49754392 | MS.gene070614:CDS | 50.0% | |
GGAAGCGATCCCCTTTCTTA+TGG | + | chr8.1:49755797-49755816 | MS.gene070614:CDS | 50.0% | |
GGCTGGATATTGCCTACAAG+TGG | - | chr8.1:49755915-49755934 | None:intergenic | 50.0% | |
GGGGAAGATCTGGACACATT+TGG | + | chr8.1:49754978-49754997 | MS.gene070614:CDS | 50.0% | |
GGGGTTGTCTCAGAATTAGG+CGG | + | chr8.1:49753877-49753896 | MS.gene070614:CDS | 50.0% | |
GGGTTGTCTCAGAATTAGGC+GGG | + | chr8.1:49753878-49753897 | MS.gene070614:CDS | 50.0% | |
GTCGTGCCAAAACCGCTAAA+GGG | - | chr8.1:49754317-49754336 | None:intergenic | 50.0% | |
GTTAGGAGGTGGTTGACGAA+GGG | + | chr8.1:49753961-49753980 | MS.gene070614:CDS | 50.0% | |
TACGCTCCCACCAAGATCTA+GGG | - | chr8.1:49754274-49754293 | None:intergenic | 50.0% | |
TATAAACTCTGCCGCCAGGA+CGG | - | chr8.1:49754218-49754237 | None:intergenic | 50.0% | |
TCTTCCCCCCAAAACACATG+TGG | - | chr8.1:49754966-49754985 | None:intergenic | 50.0% | |
TGAGTATAAACTCTGCCGCC+AGG | - | chr8.1:49754222-49754241 | None:intergenic | 50.0% | |
TGCAGAATCGCTTTCGACTG+CGG | - | chr8.1:49756136-49756155 | None:intergenic | 50.0% | |
TGTCGTGCCAAAACCGCTAA+AGG | - | chr8.1:49754318-49754337 | None:intergenic | 50.0% | |
TGTTAGGAGGTGGTTGACGA+AGG | + | chr8.1:49753960-49753979 | MS.gene070614:CDS | 50.0% | |
TTACGCTCCCACCAAGATCT+AGG | - | chr8.1:49754275-49754294 | None:intergenic | 50.0% | |
TTCAGCTGCCTATTGGGATC+AGG | + | chr8.1:49754632-49754651 | MS.gene070614:CDS | 50.0% | |
TTTGGAGGGGGAATGTTAGG+AGG | + | chr8.1:49753947-49753966 | MS.gene070614:CDS | 50.0% | |
! | AAAGCACCATGCATAGTGGC+TGG | - | chr8.1:49755932-49755951 | None:intergenic | 50.0% |
! | CCCCGTTCGGCTTGAATAAA+GGG | - | chr8.1:49754377-49754396 | None:intergenic | 50.0% |
! | CTCTTTGGAGGGGGAATGTT+AGG | + | chr8.1:49753944-49753963 | MS.gene070614:CDS | 50.0% |
! | CTTGGTGGGAGCGTAATTAC+TGG | + | chr8.1:49754279-49754298 | MS.gene070614:CDS | 50.0% |
! | GACTGCGGATCTTCTGAGAA+AGG | - | chr8.1:49756121-49756140 | None:intergenic | 50.0% |
! | GTTGCTGATCACGGGTTAAC+TGG | - | chr8.1:49755988-49756007 | None:intergenic | 50.0% |
! | TCCCCGTTCGGCTTGAATAA+AGG | - | chr8.1:49754378-49754397 | None:intergenic | 50.0% |
! | TCGGTTCCTCCTTCCTTTTC+GGG | - | chr8.1:49756395-49756414 | None:intergenic | 50.0% |
! | TTTCCTTCCCCCCCTGTTTT+AGG | + | chr8.1:49755229-49755248 | MS.gene070614:intron | 50.0% |
!! | GGTTACCACACTGTTTCTGG+TGG | + | chr8.1:49755050-49755069 | MS.gene070614:CDS | 50.0% |
!!! | TGTGTTTTGGGGGGAAGATC+TGG | + | chr8.1:49754968-49754987 | MS.gene070614:CDS | 50.0% |
ACACCTAAAACAGGGGGGGA+AGG | - | chr8.1:49755235-49755254 | None:intergenic | 55.0% | |
ACCTTATGCACCGTGCCTCT+TGG | + | chr8.1:49754831-49754850 | MS.gene070614:CDS | 55.0% | |
CCGACTGTTCTTTGCAGGTG+AGG | + | chr8.1:49755889-49755908 | MS.gene070614:CDS | 55.0% | |
CGAACAATCACCTCGCAACC+CGG | + | chr8.1:49756412-49756431 | MS.gene070614:CDS | 55.0% | |
CGCAGGACTTATTGCGCTTG+TGG | + | chr8.1:49755073-49755092 | MS.gene070614:CDS | 55.0% | |
CGGGTTGCGAGGTGATTGTT+CGG | - | chr8.1:49756414-49756433 | None:intergenic | 55.0% | |
GGACTTATTGCGCTTGTGGC+CGG | + | chr8.1:49755077-49755096 | MS.gene070614:CDS | 55.0% | |
GGCAATCATAGCCTCCGTGT+TGG | - | chr8.1:49753806-49753825 | None:intergenic | 55.0% | |
GGGAACCGACTGTTCTTTGC+AGG | + | chr8.1:49755884-49755903 | MS.gene070614:CDS | 55.0% | |
TTCTCAGTTGCCTGAGGCGA+CGG | + | chr8.1:49754092-49754111 | MS.gene070614:CDS | 55.0% | |
TTGCAGGTGAGGCCACTTGT+AGG | + | chr8.1:49755900-49755919 | MS.gene070614:CDS | 55.0% | |
TTGCGGCCCTAGATCTTGGT+GGG | + | chr8.1:49754265-49754284 | MS.gene070614:CDS | 55.0% | |
TTGGAAGGTAGGAACCGTCC+TGG | + | chr8.1:49754201-49754220 | MS.gene070614:CDS | 55.0% | |
TTTGCGGCCCTAGATCTTGG+TGG | + | chr8.1:49754264-49754283 | MS.gene070614:CDS | 55.0% | |
! | GCGAGGCAGCTTTTGTCGTT+TGG | + | chr8.1:49754162-49754181 | MS.gene070614:CDS | 55.0% |
! | TCCAAGAGGCACGGTGCATA+AGG | - | chr8.1:49754835-49754854 | None:intergenic | 55.0% |
!! | AGCATTGCTGGCTCCCGAAA+AGG | + | chr8.1:49756379-49756398 | MS.gene070614:CDS | 55.0% |
!! | TTATTGGGGCTGGCCTTGCT+GGG | + | chr8.1:49754130-49754149 | MS.gene070614:CDS | 55.0% |
!! | TTGCTGGCTCCCGAAAAGGA+AGG | + | chr8.1:49756383-49756402 | MS.gene070614:CDS | 55.0% |
AAGGGGATCGCTTCCCCATC+TGG | - | chr8.1:49755792-49755811 | None:intergenic | 60.0% | |
AGTTGCCTGAGGCGACGGAA+GGG | + | chr8.1:49754097-49754116 | MS.gene070614:CDS | 60.0% | |
ATTCAAGCCGAACGGGGAGC+CGG | + | chr8.1:49754380-49754399 | MS.gene070614:CDS | 60.0% | |
CTGCGCCACCAGAAACAGTG+TGG | - | chr8.1:49755058-49755077 | None:intergenic | 60.0% | |
CTGGCTCCCGAAAAGGAAGG+AGG | + | chr8.1:49756386-49756405 | MS.gene070614:CDS | 60.0% | |
GAAGGTAGGAACCGTCCTGG+CGG | + | chr8.1:49754204-49754223 | MS.gene070614:CDS | 60.0% | |
GGAGGGGGAATGTTAGGAGG+TGG | + | chr8.1:49753950-49753969 | MS.gene070614:CDS | 60.0% | |
! | TTATCGACCGGCTCCCCGTT+CGG | - | chr8.1:49754390-49754409 | None:intergenic | 60.0% |
!! | CACACTGTTTCTGGTGGCGC+AGG | + | chr8.1:49755056-49755075 | MS.gene070614:CDS | 60.0% |
!! | GTTATTGGGGCTGGCCTTGC+TGG | + | chr8.1:49754129-49754148 | MS.gene070614:CDS | 60.0% |
CAGTTGCCTGAGGCGACGGA+AGG | + | chr8.1:49754096-49754115 | MS.gene070614:CDS | 65.0% | |
CTTTGGGTCACCGGGTTGCG+AGG | - | chr8.1:49756425-49756444 | None:intergenic | 65.0% | |
GAACGGGGAGCCGGTCGATA+AGG | + | chr8.1:49754389-49754408 | MS.gene070614:CDS | 65.0% | |
TCGCTGCAGCCAACCCAGCA+AGG | - | chr8.1:49754146-49754165 | None:intergenic | 65.0% | |
!! | TTGCTGGGTTGGCTGCAGCG+AGG | + | chr8.1:49754145-49754164 | MS.gene070614:CDS | 65.0% |
ACCGTCCCTTCCGTCGCCTC+AGG | - | chr8.1:49754105-49754124 | None:intergenic | 70.0% | |
GCCTGAGGCGACGGAAGGGA+CGG | + | chr8.1:49754101-49754120 | MS.gene070614:CDS | 70.0% | |
!! | TGGGGCTGGCCTTGCTGGGT+TGG | + | chr8.1:49754134-49754153 | MS.gene070614:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 49753634 | 49756450 | 49753634 | ID=MS.gene070614 |
chr8.1 | mRNA | 49753634 | 49756450 | 49753634 | ID=MS.gene070614.t1;Parent=MS.gene070614 |
chr8.1 | exon | 49753634 | 49755170 | 49753634 | ID=MS.gene070614.t1.exon1;Parent=MS.gene070614.t1 |
chr8.1 | CDS | 49753634 | 49755170 | 49753634 | ID=cds.MS.gene070614.t1;Parent=MS.gene070614.t1 |
chr8.1 | exon | 49755735 | 49756450 | 49755735 | ID=MS.gene070614.t1.exon2;Parent=MS.gene070614.t1 |
chr8.1 | CDS | 49755735 | 49756450 | 49755735 | ID=cds.MS.gene070614.t1;Parent=MS.gene070614.t1 |
Gene Sequence |
Protein sequence |