AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056792


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056792.t1 MTR_8g030680 99.261 541 4 0 1 541 1 541 0.0 1102
MS.gene056792.t1 MTR_8g030680 99.560 455 2 0 87 541 1 455 0.0 929
MS.gene056792.t1 MTR_7g077800 81.025 527 98 2 15 540 12 537 0.0 885
MS.gene056792.t1 MTR_6g463340 71.236 518 145 3 20 536 23 537 0.0 760
MS.gene056792.t1 MTR_7g077800 81.364 440 80 2 15 453 12 450 0.0 732
MS.gene056792.t1 MTR_7g077800 82.000 400 70 2 142 540 1 399 0.0 674
MS.gene056792.t1 MTR_6g463340 72.390 431 116 2 107 536 1 429 0.0 640
MS.gene056792.t1 MTR_7g077800 77.628 371 81 2 15 384 12 381 0.0 587
MS.gene056792.t1 MTR_7g405780 50.000 500 245 3 25 522 30 526 1.41e-172 499
MS.gene056792.t1 MTR_7g405780 49.793 482 237 3 25 504 30 508 5.16e-166 481
MS.gene056792.t1 MTR_1g116953 45.041 484 259 4 40 520 30 509 6.99e-148 435
MS.gene056792.t1 MTR_7g405780 49.070 430 214 3 25 452 30 456 7.33e-144 422
MS.gene056792.t1 MTR_7g405780 48.946 427 213 3 25 449 30 453 3.14e-142 418
MS.gene056792.t1 MTR_1g100980 26.149 348 184 12 241 539 47 370 1.60e-22 99.8
MS.gene056792.t1 MTR_3g109932 31.959 194 117 5 348 541 161 339 1.23e-20 93.6
MS.gene056792.t1 MTR_3g109932 35.897 156 85 5 348 503 161 301 4.68e-20 91.7
MS.gene056792.t1 MTR_1g008280 31.500 200 118 6 338 537 155 335 2.75e-19 90.1
MS.gene056792.t1 MTR_1g008280 31.293 147 83 5 338 484 155 283 2.38e-13 71.2
MS.gene056792.t1 MTR_3g109968 33.333 111 71 2 431 541 25 132 2.50e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056792.t1 AT1G01650 73.978 538 134 2 6 537 2 539 0.0 835
MS.gene056792.t1 AT1G63690 74.125 514 131 1 23 536 25 536 0.0 790
MS.gene056792.t1 AT1G63690 73.930 514 132 1 23 536 25 536 0.0 789
MS.gene056792.t1 AT1G01650 76.574 397 92 1 142 537 1 397 0.0 635
MS.gene056792.t1 AT1G01650 76.574 397 92 1 142 537 1 397 0.0 635
MS.gene056792.t1 AT1G01650 76.574 397 92 1 142 537 1 397 0.0 635
MS.gene056792.t1 AT2G43070 47.338 526 272 3 8 530 11 534 1.69e-159 465
MS.gene056792.t1 AT2G43070 47.338 526 272 3 8 530 70 593 1.57e-158 465
MS.gene056792.t1 AT2G43070 46.992 532 271 4 8 530 11 540 6.08e-158 462
MS.gene056792.t1 AT2G43070 46.992 532 271 4 8 530 70 599 4.09e-157 462
MS.gene056792.t1 AT1G05820 43.811 509 279 3 31 537 30 533 3.35e-144 426
MS.gene056792.t1 AT1G05820 44.632 475 259 2 31 503 30 502 1.63e-139 413
MS.gene056792.t1 AT1G05820 45.477 398 210 3 142 537 1 393 4.13e-119 357
MS.gene056792.t1 AT1G05820 40.584 377 220 2 31 405 30 404 2.28e-90 284
MS.gene056792.t1 AT4G33410 26.074 326 177 11 241 519 47 355 1.37e-23 103
MS.gene056792.t1 AT2G03120 33.684 190 111 5 348 537 161 335 3.00e-22 98.6

Find 121 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATGAGGACAATGCCTTTC+TGG 0.135793 8.4:-66438673 None:intergenic
TGTGCTTGCTTCCTGTTTCT+TGG 0.229721 8.4:+66435637 MS.gene056792:CDS
CTTTCCTATATGACATCTTA+TGG 0.233407 8.4:+66436475 MS.gene056792:CDS
TTATACTTACCAAGTGTAAA+TGG 0.235488 8.4:-66437806 None:intergenic
GTTTGGTGTGTCTTTGGTTT+TGG 0.248253 8.4:+66433567 MS.gene056792:CDS
GTTACAGCATCATTGGTTTC+GGG 0.276829 8.4:+66436826 MS.gene056792:CDS
TGTACAAATTAATGTCATTC+TGG 0.277038 8.4:+66435666 MS.gene056792:CDS
GCTCACCAATGAGATCATTT+TGG 0.282959 8.4:+66434608 MS.gene056792:intron
GGTTACAGCATCATTGGTTT+CGG 0.284269 8.4:+66436825 MS.gene056792:CDS
ACCACGTTTGTTTGATCCTT+GGG 0.292106 8.4:+66436800 MS.gene056792:CDS
AGTCAAAATACCTTATTCTT+AGG 0.296947 8.4:-66434450 None:intergenic
ATATGTCGCTTTAAACTTGA+TGG 0.299572 8.4:+66437748 MS.gene056792:CDS
CATAGTATTTGCAGTGGTTT+GGG 0.300952 8.4:+66436034 MS.gene056792:CDS
GCATAGTATTTGCAGTGGTT+TGG 0.301464 8.4:+66436033 MS.gene056792:CDS
GTTTCTGTTTGGTGTGTCTT+TGG 0.311149 8.4:+66433561 MS.gene056792:CDS
TCAAATCATACCTTGAGATT+TGG 0.314981 8.4:-66436241 None:intergenic
TATGTGAAGATACCGTTCTT+TGG 0.317072 8.4:+66435972 MS.gene056792:CDS
CCAATAAGAAGCACATAAAA+TGG 0.329319 8.4:-66435265 None:intergenic
ATCAATGTTGGTTAATTGAT+TGG 0.335483 8.4:-66438708 None:intergenic
TGGGGTGGTTACAGCATCAT+TGG 0.340318 8.4:+66436819 MS.gene056792:CDS
AATGAAACTGATGTTGATAT+TGG 0.345185 8.4:+66434991 MS.gene056792:CDS
AATTCTTAGAATGGTTTCAT+TGG 0.353819 8.4:+66433507 None:intergenic
TTGTGAGAATAACTTTGTTC+TGG 0.354785 8.4:+66433636 MS.gene056792:CDS
ATTCTGGTTTCTTGAAGTTC+TGG 0.356705 8.4:+66435682 MS.gene056792:CDS
TTGTAGCAAGCCTAAGAATA+AGG 0.358188 8.4:+66434440 MS.gene056792:CDS
GTGCTTCTTATTGGTCTGCT+TGG 0.367692 8.4:+66435274 MS.gene056792:CDS
TTCTCACAACCAGGCCTTGT+TGG 0.376878 8.4:-66433622 None:intergenic
TTTCCTATATGACATCTTAT+GGG 0.378805 8.4:+66436476 MS.gene056792:CDS
TACCACGTTTGTTTGATCCT+TGG 0.389231 8.4:+66436799 MS.gene056792:CDS
TGGTTAACTTCTTCAATATG+AGG 0.390926 8.4:-66438688 None:intergenic
TATGGGTGTTCGTCTCTAAA+TGG 0.393668 8.4:+66436493 MS.gene056792:CDS
TTTCGGGGACATAATCTTAC+CGG 0.395970 8.4:+66436842 MS.gene056792:CDS
GTGTGGGCAATGACTGCTTA+TGG 0.406868 8.4:+66437414 MS.gene056792:CDS
TTGCTCAATAGCAGCTTCTC+TGG 0.407570 8.4:-66435301 None:intergenic
GTAGCATATGTGTTTCTGTT+TGG 0.410692 8.4:+66433550 MS.gene056792:CDS
ATTCTTAGAATGGTTTCATT+GGG 0.419905 8.4:+66433508 None:intergenic
TTAGGCTTGCTACAACAATC+AGG 0.422579 8.4:-66434432 None:intergenic
TTCATCAGCTATATTTGCCT+TGG 0.424615 8.4:-66434658 None:intergenic
CATGACAACTCTAGTATGAT+TGG 0.435387 8.4:-66434400 None:intergenic
CCACACCATCAATCCAAGTT+GGG 0.441766 8.4:-66434311 None:intergenic
AAAGTCCCAACTTGGATTGA+TGG 0.441839 8.4:+66434306 MS.gene056792:CDS
ACAAGATGCTGGATTAAACT+TGG 0.448478 8.4:+66435035 MS.gene056792:CDS
GTTGGTGTCGGTGCAAGATT+CGG 0.451181 8.4:+66434348 MS.gene056792:CDS
GTACAGCATAACCAAGAAAC+AGG 0.452241 8.4:-66435648 None:intergenic
CTCATTATAAATTATCGTAC+AGG 0.453906 8.4:+66434699 MS.gene056792:CDS
ATCTTCACATATGTTTGTGC+AGG 0.456906 8.4:-66435960 None:intergenic
GCAATGACTGCTTATGGTCT+AGG 0.461735 8.4:+66437420 MS.gene056792:CDS
GTTATGCTTCCACAAGATGC+TGG 0.462553 8.4:+66435024 MS.gene056792:CDS
ATACTCTCCACTTCGTCCAT+TGG 0.465650 8.4:+66435200 MS.gene056792:CDS
TAAGGGTCTACAAACTTGTC+TGG 0.469680 8.4:+66435814 MS.gene056792:intron
GTTAGGTCAAAGTCCCAACT+TGG 0.470294 8.4:+66434298 MS.gene056792:intron
CTGGTTTCTTGAAGTTCTGG+TGG 0.471891 8.4:+66435685 MS.gene056792:CDS
TTTCTCTGTACAGGTAGCTC+GGG 0.478408 8.4:+66436734 MS.gene056792:intron
CCACTATCATCACGCTCTCA+TGG 0.480266 8.4:-66436521 None:intergenic
GTAACAGCAAGTGTCAGATA+TGG 0.481241 8.4:-66436002 None:intergenic
TATACTTACCAAGTGTAAAT+GGG 0.486632 8.4:-66437805 None:intergenic
TCCACACCATCAATCCAAGT+TGG 0.493462 8.4:-66434312 None:intergenic
GTGCACCAAAATGATCTCAT+TGG 0.493592 8.4:-66434613 None:intergenic
CTATATAGAGCAAAGCTGGC+TGG 0.507003 8.4:-66437781 None:intergenic
ACGATAATTTATAATGAGAA+TGG 0.509940 8.4:-66434694 None:intergenic
AAAGTTGTTGTAGTTTCAGA+TGG 0.512418 8.4:+66435928 MS.gene056792:intron
AATGAGAATGGCTGAAGCAC+CGG 0.516902 8.4:-66434682 None:intergenic
GTCTGGCGGCTCTATTATCA+TGG 0.517009 8.4:+66435831 MS.gene056792:CDS
ACACCCATAAGATGTCATAT+AGG 0.520311 8.4:-66436479 None:intergenic
CCATGAGAGCGTGATGATAG+TGG 0.524478 8.4:+66436521 MS.gene056792:CDS
GATGTTGTTCCAACAAGGCC+TGG 0.526026 8.4:+66433613 MS.gene056792:CDS
GCAAAGAAGAACCTCCGAGC+TGG 0.526351 8.4:+66437384 MS.gene056792:CDS
GGGACTATATAGAGCAAAGC+TGG 0.526557 8.4:-66437785 None:intergenic
AAGTTTAATCCAGCATCTTG+TGG 0.531321 8.4:-66435033 None:intergenic
GTCGCTTTAAACTTGATGGA+TGG 0.538119 8.4:+66437752 MS.gene056792:CDS
GAAAATGCTACTACAAGTCC+CGG 0.543526 8.4:-66436861 None:intergenic
AAGTGGAGAGTATAACTGTA+TGG 0.543946 8.4:-66435190 None:intergenic
CAAGCATCATATGCATGGAT+TGG 0.544368 8.4:+66436068 MS.gene056792:CDS
CGTGGTAACTTGAGAAGCAT+GGG 0.546674 8.4:-66436783 None:intergenic
CACTGCAAATACTATGCAGA+AGG 0.550804 8.4:-66436027 None:intergenic
AACGACAAGCATCATATGCA+TGG 0.564749 8.4:+66436063 MS.gene056792:CDS
ACGTGGTAACTTGAGAAGCA+TGG 0.564772 8.4:-66436784 None:intergenic
TTCGGGGACATAATCTTACC+GGG 0.571328 8.4:+66436843 MS.gene056792:CDS
TGCAAGATTCGGTCCTACGT+TGG 0.574301 8.4:+66434359 MS.gene056792:CDS
GCAAATATAGCTGATGAAGC+CGG 0.576888 8.4:+66434663 MS.gene056792:CDS
CCACGTTTGTTTGATCCTTG+GGG 0.578234 8.4:+66436801 MS.gene056792:CDS
CAATCATACTAGAGTTGTCA+TGG 0.579681 8.4:+66434401 MS.gene056792:CDS
GCAGAAAGTGTTGGTTCTCG+TGG 0.579848 8.4:+66435575 MS.gene056792:CDS
CCCAACTTGGATTGATGGTG+TGG 0.588257 8.4:+66434311 MS.gene056792:CDS
TGTTGGTTCTCGTGGTTACG+TGG 0.588787 8.4:+66435583 MS.gene056792:CDS
TATATAGTCCCATTTACACT+TGG 0.589134 8.4:+66437797 MS.gene056792:CDS
GGACAAGAGGAGAACCAGAA+AGG 0.592548 8.4:+66438659 MS.gene056792:CDS
CTTCTGCATAGTATTTGCAG+TGG 0.594852 8.4:+66436028 MS.gene056792:CDS
TCCGAGCTGGATACTTCGTG+TGG 0.595477 8.4:+66437397 MS.gene056792:CDS
AATCTGCTGAAGATCAATGT+TGG 0.596723 8.4:-66438720 None:intergenic
CGTTTGTTTGATCCTTGGGG+TGG 0.597198 8.4:+66436804 MS.gene056792:CDS
TTGTCATTGGGAAAGAAGAG+AGG 0.601284 8.4:+66438619 MS.gene056792:CDS
TCTTGTGGAAGCATAACAGC+AGG 0.606664 8.4:-66435018 None:intergenic
TTACAGCATCATTGGTTTCG+GGG 0.610146 8.4:+66436827 MS.gene056792:CDS
GGGTGTTCGTCTCTAAATGG+TGG 0.611855 8.4:+66436496 MS.gene056792:CDS
TGTTCGCATACCAAATCTCA+AGG 0.612517 8.4:+66436231 MS.gene056792:CDS
AGTATTTGCAGTGGTTTGGG+CGG 0.612976 8.4:+66436037 MS.gene056792:CDS
AGCAAGTGTCAGATATGGAA+CGG 0.613995 8.4:-66435997 None:intergenic
GAATATGTTGCAGAAAGTGT+TGG 0.615196 8.4:+66435566 MS.gene056792:CDS
ACATCAACCAATGGACGAAG+TGG 0.617248 8.4:-66435207 None:intergenic
TATGGAACGGCTCCAAAGAA+CGG 0.619684 8.4:-66435984 None:intergenic
AAAATGTAGTTTCACAACCA+AGG 0.628218 8.4:+66434641 MS.gene056792:CDS
ATGATGATGTTGTTCCAACA+AGG 0.629797 8.4:+66433608 MS.gene056792:CDS
TTCTCTGTACAGGTAGCTCG+GGG 0.629906 8.4:+66436735 MS.gene056792:intron
AACGCTGAATATGTTGGTGT+CGG 0.629918 8.4:+66434336 MS.gene056792:CDS
CACATACAAAATAACTCCAT+AGG 0.631134 8.4:+66435063 MS.gene056792:CDS
GGTGATAAGAGTGGAGAAGA+CGG 0.633523 8.4:+66436756 MS.gene056792:CDS
ACTTCTGCAACATCAACCAA+TGG 0.636639 8.4:-66435216 None:intergenic
CCCACACGAAGTATCCAGCT+CGG 0.639630 8.4:-66437398 None:intergenic
TTAAACTTGATGGATGGACA+TGG 0.640581 8.4:+66437758 MS.gene056792:CDS
GTAGCTCGGGGTGATAAGAG+TGG 0.642633 8.4:+66436747 MS.gene056792:CDS
TTAAAGCGACATATGTGATG+AGG 0.646719 8.4:-66437739 None:intergenic
GTGGAAAACGCTGAATATGT+TGG 0.652967 8.4:+66434330 MS.gene056792:CDS
GGGTCTACAAACTTGTCTGG+CGG 0.654727 8.4:+66435817 MS.gene056792:intron
CCGAGCTGGATACTTCGTGT+GGG 0.658262 8.4:+66437398 MS.gene056792:CDS
ACAAAGTTATTCTCACAACC+AGG 0.666217 8.4:-66433631 None:intergenic
ACTGCAAATACTATGCAGAA+GGG 0.683125 8.4:-66436026 None:intergenic
CCCCAAGGATCAAACAAACG+TGG 0.683397 8.4:-66436801 None:intergenic
GGCTTGCTACAACAATCAGG+AGG 0.689982 8.4:-66434429 None:intergenic
ATGATGCTGTAACCACCCCA+AGG 0.696121 8.4:-66436816 None:intergenic
ACACGAAGTATCCAGCTCGG+AGG 0.740591 8.4:-66437395 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATGAAGAATAAAAAATT+TGG - chr8.4:66433664-66433683 None:intergenic 10.0%
!! TTCAACAAAAATAAAAATAA+GGG - chr8.4:66436630-66436649 None:intergenic 10.0%
!!! AAAAATCATTTTTTTAATTG+AGG + chr8.4:66433789-66433808 MS.gene056792:intron 10.0%
!!! AATTCTTTTATAATTGTTTT+TGG + chr8.4:66433841-66433860 MS.gene056792:intron 10.0%
!!! ATAAAATTATTCATCATTTT+TGG - chr8.4:66434835-66434854 None:intergenic 10.0%
!!! TGATATATAAATTACTTTTA+TGG + chr8.4:66435525-66435544 MS.gene056792:intron 10.0%
!! AAAACTCAATACTAATTATA+AGG - chr8.4:66436716-66436735 None:intergenic 15.0%
!! CTTCAACAAAAATAAAAATA+AGG - chr8.4:66436631-66436650 None:intergenic 15.0%
!! TCAACAAAAATAAAAATAAG+GGG - chr8.4:66436629-66436648 None:intergenic 15.0%
!!! ATATTATAAGCTATTTCAAT+AGG + chr8.4:66437162-66437181 MS.gene056792:intron 15.0%
!!! ATGTTTTTTTTATGATAAAG+AGG + chr8.4:66436951-66436970 MS.gene056792:intron 15.0%
!!! TGAATATTTAATTTATGCTA+TGG + chr8.4:66434902-66434921 MS.gene056792:intron 15.0%
!!! TTTTATTTTTGTTGAAGAAA+CGG + chr8.4:66436634-66436653 MS.gene056792:intron 15.0%
!! AAAAAAACATAAGTAACACA+AGG - chr8.4:66436941-66436960 None:intergenic 20.0%
!! AAAATGTTACTAAAAGTCTA+GGG - chr8.4:66436155-66436174 None:intergenic 20.0%
!! ACGATAATTTATAATGAGAA+TGG - chr8.4:66434697-66434716 None:intergenic 20.0%
!! ATGAACATACAAATATTAGA+GGG - chr8.4:66435788-66435807 None:intergenic 20.0%
!! CTATTCTTCAATGTATTATT+TGG + chr8.4:66437875-66437894 MS.gene056792:intron 20.0%
!! CTCATTTATTACAAAATAAC+CGG + chr8.4:66438091-66438110 MS.gene056792:intron 20.0%
!! GCATTTATAAACAGTTAAAT+CGG + chr8.4:66436341-66436360 MS.gene056792:intron 20.0%
!! TAAATATTCAACAGATTGAT+TGG - chr8.4:66434892-66434911 None:intergenic 20.0%
!! TAAGTTCTTAATTGCATATA+TGG + chr8.4:66438337-66438356 MS.gene056792:intron 20.0%
!! TATGAACATACAAATATTAG+AGG - chr8.4:66435789-66435808 None:intergenic 20.0%
!! TCAATTTGGATAGAAATAAT+AGG - chr8.4:66435904-66435923 None:intergenic 20.0%
!! TTAATTGAGGAAAGAAAAAT+TGG + chr8.4:66433802-66433821 MS.gene056792:intron 20.0%
!! TTTCAAATTTATGAGTAAGA+TGG - chr8.4:66437832-66437851 None:intergenic 20.0%
!!! ACCAATTTACAGTTTTTTTT+CGG - chr8.4:66438445-66438464 None:intergenic 20.0%
!!! AGAAAGTGTTTTTTATGTTA+AGG + chr8.4:66435461-66435480 MS.gene056792:intron 20.0%
!!! ATCATATCATTTTCAATAAC+AGG - chr8.4:66434110-66434129 None:intergenic 20.0%
!!! TCAATTTTTCTTGTAGTTAT+TGG + chr8.4:66437674-66437693 MS.gene056792:intron 20.0%
!!! TTATTTTGACATTAAAACGT+AGG - chr8.4:66437199-66437218 None:intergenic 20.0%
!!! TTGAACTTTCTGTTTTTTAA+GGG + chr8.4:66433872-66433891 MS.gene056792:intron 20.0%
!!! TTTGAACTTTCTGTTTTTTA+AGG + chr8.4:66433871-66433890 MS.gene056792:intron 20.0%
! AAACGGAGATTATAGTAAAA+TGG + chr8.4:66436651-66436670 MS.gene056792:intron 25.0%
! AACGGAGATTATAGTAAAAT+GGG + chr8.4:66436652-66436671 MS.gene056792:intron 25.0%
! AAGAAAAATTGAAGTGATGA+CGG - chr8.4:66437666-66437685 None:intergenic 25.0%
! AAGATAAAGTGAAGAAAGAA+TGG + chr8.4:66435377-66435396 MS.gene056792:intron 25.0%
! AATCAATTAACCAACATTGA+TGG + chr8.4:66438710-66438729 MS.gene056792:CDS 25.0%
! AATGAAACTGATGTTGATAT+TGG + chr8.4:66434991-66435010 MS.gene056792:CDS 25.0%
! AATTCAACGAATAACACATA+TGG - chr8.4:66437705-66437724 None:intergenic 25.0%
! ACCAAGATAGATTATAGAAA+CGG - chr8.4:66437106-66437125 None:intergenic 25.0%
! ACCGAAAAAAAACTGTAAAT+TGG + chr8.4:66438441-66438460 MS.gene056792:intron 25.0%
! AGTCAAAATACCTTATTCTT+AGG - chr8.4:66434453-66434472 None:intergenic 25.0%
! ATCTCCATGTAAAAAAGAAT+AGG + chr8.4:66437265-66437284 MS.gene056792:intron 25.0%
! ATTATTTGGTTGTGTTCTAT+TGG + chr8.4:66437889-66437908 MS.gene056792:intron 25.0%
! ATTCAACGAATAACACATAT+GGG - chr8.4:66437704-66437723 None:intergenic 25.0%
! ATTGTGCTGTATAATGTTAA+CGG + chr8.4:66437308-66437327 MS.gene056792:intron 25.0%
! CAAAAATAAAAATAAGGGGA+AGG - chr8.4:66436625-66436644 None:intergenic 25.0%
! CTCATTATAAATTATCGTAC+AGG + chr8.4:66434699-66434718 MS.gene056792:CDS 25.0%
! GAAAATGTTACTAAAAGTCT+AGG - chr8.4:66436156-66436175 None:intergenic 25.0%
! GATCATACAATATATGTATG+TGG + chr8.4:66436904-66436923 MS.gene056792:intron 25.0%
! GTATGATACACATATGATTT+GGG + chr8.4:66437442-66437461 MS.gene056792:intron 25.0%
! TATGATACACATATGATTTG+GGG + chr8.4:66437443-66437462 MS.gene056792:intron 25.0%
! TGTAAAAAAGAATAGGTACA+TGG + chr8.4:66437272-66437291 MS.gene056792:intron 25.0%
! TGTACAAATTAATGTCATTC+TGG + chr8.4:66435666-66435685 MS.gene056792:CDS 25.0%
! TGTATGTTCATATGCTTTAA+GGG + chr8.4:66435797-66435816 MS.gene056792:intron 25.0%
! TTAGAAAATAGAGTGTAGTT+AGG + chr8.4:66434150-66434169 MS.gene056792:intron 25.0%
! TTCTTAATTGCATATATGGA+TGG + chr8.4:66438341-66438360 MS.gene056792:intron 25.0%
! TTGTATGTTCATATGCTTTA+AGG + chr8.4:66435796-66435815 MS.gene056792:intron 25.0%
! TTTCCTATATGACATCTTAT+GGG + chr8.4:66436476-66436495 MS.gene056792:CDS 25.0%
! TTTGGTAGAACTTATGAAAA+TGG + chr8.4:66433940-66433959 MS.gene056792:intron 25.0%
! TTTGTCAATTAGTGATCTTT+AGG + chr8.4:66434799-66434818 MS.gene056792:intron 25.0%
!! AAGTAAACTTTTATGCAATG+TGG + chr8.4:66434253-66434272 MS.gene056792:intron 25.0%
!! ATTCGTTGAATTTTATATGC+AGG + chr8.4:66437713-66437732 MS.gene056792:intron 25.0%
!! TATCTTTTAGTGTGAAAGAT+TGG - chr8.4:66435363-66435382 None:intergenic 25.0%
!! TTATCTACAATGCTTGATTT+TGG + chr8.4:66436579-66436598 MS.gene056792:intron 25.0%
!! TTTGAAAGTGTAAACACATA+TGG + chr8.4:66437845-66437864 MS.gene056792:intron 25.0%
!!! AGTTGTTTTTACAATTGAAG+AGG + chr8.4:66437045-66437064 MS.gene056792:intron 25.0%
!!! TAAATTACTTTTATGGTTGC+AGG + chr8.4:66435532-66435551 MS.gene056792:intron 25.0%
!!! TGATTTTAGTTTCCAATAGA+TGG + chr8.4:66438393-66438412 MS.gene056792:intron 25.0%
!!! TGTACCTATTCTTTTTTACA+TGG - chr8.4:66437272-66437291 None:intergenic 25.0%
!!! TTACTTGTTTTTGATACTCT+TGG + chr8.4:66436292-66436311 MS.gene056792:intron 25.0%
!!! TTTATGTGTGATTTTGATCT+TGG + chr8.4:66433706-66433725 MS.gene056792:intron 25.0%
AAAATGTAGTTTCACAACCA+AGG + chr8.4:66434641-66434660 MS.gene056792:CDS 30.0%
AAAGTTGTTGTAGTTTCAGA+TGG + chr8.4:66435928-66435947 MS.gene056792:intron 30.0%
ACATAAAAAACACTTTCTCC+CGG - chr8.4:66435459-66435478 None:intergenic 30.0%
AGATAGAGACAAACAATAAC+CGG + chr8.4:66435437-66435456 MS.gene056792:intron 30.0%
ATACTCTTGGATTTAAGAAC+AGG + chr8.4:66436305-66436324 MS.gene056792:intron 30.0%
ATACTTCCGAACTAACTATA+GGG + chr8.4:66438244-66438263 MS.gene056792:intron 30.0%
ATATTGCTTGACTATCATTC+AGG + chr8.4:66436177-66436196 MS.gene056792:intron 30.0%
ATCTACAACAACAAACTTCA+AGG - chr8.4:66435869-66435888 None:intergenic 30.0%
CACATACAAAATAACTCCAT+AGG + chr8.4:66435063-66435082 MS.gene056792:CDS 30.0%
CATAAAATACATCTCCACAT+AGG + chr8.4:66437242-66437261 MS.gene056792:intron 30.0%
CTTCACGACAAAATTAGAAA+CGG - chr8.4:66437594-66437613 None:intergenic 30.0%
CTTTCCTATATGACATCTTA+TGG + chr8.4:66436475-66436494 MS.gene056792:CDS 30.0%
GAAAGAAAAATTGGACTGTT+TGG + chr8.4:66433811-66433830 MS.gene056792:intron 30.0%
GGTATGATACACATATGATT+TGG + chr8.4:66437441-66437460 MS.gene056792:intron 30.0%
GTCATGTAAATCATAATTGC+AGG + chr8.4:66438589-66438608 MS.gene056792:intron 30.0%
GTTGCATTTGGTAAATTCTA+TGG - chr8.4:66434487-66434506 None:intergenic 30.0%
TAAAAATCCACGTAGATGTT+TGG + chr8.4:66438141-66438160 MS.gene056792:intron 30.0%
TAGAGACGGAAAAATAAAAG+TGG - chr8.4:66437639-66437658 None:intergenic 30.0%
TATACTTCCGAACTAACTAT+AGG + chr8.4:66438243-66438262 MS.gene056792:intron 30.0%
TATACTTCTTTCTCTGTATC+AGG + chr8.4:66436428-66436447 MS.gene056792:intron 30.0%
TATTGCTTGACTATCATTCA+GGG + chr8.4:66436178-66436197 MS.gene056792:intron 30.0%
TCAAATCATACCTTGAGATT+TGG - chr8.4:66436244-66436263 None:intergenic 30.0%
TCTACATTATTGCCATCTAT+TGG - chr8.4:66438408-66438427 None:intergenic 30.0%
TCTGCAAATGTATTGTCTTA+TGG + chr8.4:66434217-66434236 MS.gene056792:intron 30.0%
TGACATTAAAACGTAGGTAA+TGG - chr8.4:66437193-66437212 None:intergenic 30.0%
TGCTAACAAAATGTTCTGTT+AGG + chr8.4:66434281-66434300 MS.gene056792:intron 30.0%
TGGTTAACTTCTTCAATATG+AGG - chr8.4:66438691-66438710 None:intergenic 30.0%
TGTACATGCAATAGAACAAA+GGG - chr8.4:66435152-66435171 None:intergenic 30.0%
TTATGATAAAGAGGACGTTT+GGG + chr8.4:66436960-66436979 MS.gene056792:intron 30.0%
TTGTACATGCAATAGAACAA+AGG - chr8.4:66435153-66435172 None:intergenic 30.0%
TTGTGAGAATAACTTTGTTC+TGG + chr8.4:66433636-66433655 MS.gene056792:CDS 30.0%
TTTATGATAAAGAGGACGTT+TGG + chr8.4:66436959-66436978 MS.gene056792:intron 30.0%
! AGATGTATTTTATGGACGTT+TGG - chr8.4:66437236-66437255 None:intergenic 30.0%
! ATGTTTCTAATCTTCACTTG+TGG + chr8.4:66437506-66437525 MS.gene056792:intron 30.0%
! CCAATAAGAAGCACATAAAA+TGG - chr8.4:66435268-66435287 None:intergenic 30.0%
! CCATTTTATGTGCTTCTTAT+TGG + chr8.4:66435265-66435284 MS.gene056792:CDS 30.0%
! CTATGTGGAGATGTATTTTA+TGG - chr8.4:66437244-66437263 None:intergenic 30.0%
! TAGTTAGCACAGCATTATTT+TGG - chr8.4:66438059-66438078 None:intergenic 30.0%
! TATTGAGTTTTTCTCTGTAC+AGG + chr8.4:66436725-66436744 MS.gene056792:intron 30.0%
! TGAAGTGTTAGATGGAAAAT+TGG + chr8.4:66437609-66437628 MS.gene056792:intron 30.0%
! TTGTAGTAGCATTTTCACTA+AGG + chr8.4:66436868-66436887 MS.gene056792:CDS 30.0%
! TTGTGAAACTACATTTTCCT+CGG - chr8.4:66434638-66434657 None:intergenic 30.0%
!! AATATGATCGGTTCACATTT+TGG + chr8.4:66437957-66437976 MS.gene056792:intron 30.0%
!! ACTACTTTTACAGGTATGAT+TGG + chr8.4:66437358-66437377 MS.gene056792:intron 30.0%
!! ATATGTCGCTTTAAACTTGA+TGG + chr8.4:66437748-66437767 MS.gene056792:CDS 30.0%
!! ATTTTTAGAAAGCATGGAGA+AGG - chr8.4:66438128-66438147 None:intergenic 30.0%
!! CTATTGACAACTACTTTTAC+AGG + chr8.4:66437349-66437368 MS.gene056792:intron 30.0%
!! GTTTGTTGTTGTAGATTATG+AGG + chr8.4:66435873-66435892 MS.gene056792:intron 30.0%
!! TAAGTTCTTCTGAGACTATT+TGG + chr8.4:66433922-66433941 MS.gene056792:intron 30.0%
!! TTAGTGATCTTTAGGATCAT+AGG + chr8.4:66434807-66434826 MS.gene056792:intron 30.0%
!! TTTTCTTTTGATTCCAACGT+AGG - chr8.4:66434375-66434394 None:intergenic 30.0%
!! TTTTTAGAAAGCATGGAGAA+GGG - chr8.4:66438127-66438146 None:intergenic 30.0%
AAGTTTAATCCAGCATCTTG+TGG - chr8.4:66435036-66435055 None:intergenic 35.0%
AATTGAGCATACATCACACA+AGG - chr8.4:66434073-66434092 None:intergenic 35.0%
ACAAAGTTATTCTCACAACC+AGG - chr8.4:66433634-66433653 None:intergenic 35.0%
ACAAGATGCTGGATTAAACT+TGG + chr8.4:66435035-66435054 MS.gene056792:CDS 35.0%
ACACCCATAAGATGTCATAT+AGG - chr8.4:66436482-66436501 None:intergenic 35.0%
ACTGCAAATACTATGCAGAA+GGG - chr8.4:66436029-66436048 None:intergenic 35.0%
AGAAAAATTGGACTGTTTGG+TGG + chr8.4:66433814-66433833 MS.gene056792:intron 35.0%
AGTAACACAAGGTGAATAGA+AGG - chr8.4:66436930-66436949 None:intergenic 35.0%
ATCTTCACATATGTTTGTGC+AGG - chr8.4:66435963-66435982 None:intergenic 35.0%
ATGTGAACCGATCATATTGA+TGG - chr8.4:66437955-66437974 None:intergenic 35.0%
ATTGCTATGTCATAGTCACA+TGG - chr8.4:66438520-66438539 None:intergenic 35.0%
CAATCATACTAGAGTTGTCA+TGG + chr8.4:66434401-66434420 MS.gene056792:CDS 35.0%
CAATTCAGTAACGTTGCATT+TGG - chr8.4:66434499-66434518 None:intergenic 35.0%
CATAGTATTTGCAGTGGTTT+GGG + chr8.4:66436034-66436053 MS.gene056792:CDS 35.0%
CATGACAACTCTAGTATGAT+TGG - chr8.4:66434403-66434422 None:intergenic 35.0%
GAAAAATTGGACTGTTTGGT+GGG + chr8.4:66433815-66433834 MS.gene056792:intron 35.0%
GAGAAAGTTGAACATACCTA+TGG - chr8.4:66435082-66435101 None:intergenic 35.0%
GAGACAATAAAGAGTTGTGT+TGG + chr8.4:66437984-66438003 MS.gene056792:intron 35.0%
GATAGAGACAAACAATAACC+GGG + chr8.4:66435438-66435457 MS.gene056792:intron 35.0%
GATTGGCATGAAAAGAAACT+AGG - chr8.4:66435346-66435365 None:intergenic 35.0%
GCCGTTTCTATAATCTATCT+TGG + chr8.4:66437102-66437121 MS.gene056792:intron 35.0%
GGTTCAACCATCAATATGAT+CGG + chr8.4:66437945-66437964 MS.gene056792:intron 35.0%
GTATAACTGTATGGACACTT+AGG - chr8.4:66435184-66435203 None:intergenic 35.0%
TAAATGAAGAGATGATGCCT+CGG - chr8.4:66436275-66436294 None:intergenic 35.0%
TACTTCCGAACTAACTATAG+GGG + chr8.4:66438245-66438264 MS.gene056792:intron 35.0%
TAGATGGCAATAATGTAGAC+TGG + chr8.4:66438409-66438428 MS.gene056792:intron 35.0%
TAGATTATAGAAACGGCTCA+TGG - chr8.4:66437099-66437118 None:intergenic 35.0%
TAGTAAAATGGGAACACAAG+TGG + chr8.4:66436663-66436682 MS.gene056792:intron 35.0%
TATACTTCCAAACATCTACG+TGG - chr8.4:66438151-66438170 None:intergenic 35.0%
TATGTGAAGATACCGTTCTT+TGG + chr8.4:66435972-66435991 MS.gene056792:CDS 35.0%
TTAAAGCGACATATGTGATG+AGG - chr8.4:66437742-66437761 None:intergenic 35.0%
TTCATCAGCTATATTTGCCT+TGG - chr8.4:66434661-66434680 None:intergenic 35.0%
TTCTTTCTCTGTATCAGGTT+GGG + chr8.4:66436433-66436452 MS.gene056792:intron 35.0%
TTGCTATGTCATAGTCACAT+GGG - chr8.4:66438519-66438538 None:intergenic 35.0%
TTGTAGCAAGCCTAAGAATA+AGG + chr8.4:66434440-66434459 MS.gene056792:CDS 35.0%
TTTCTAATCTTCACTTGTGG+AGG + chr8.4:66437509-66437528 MS.gene056792:intron 35.0%
TTTGCTTGCTTAGAAACTGT+TGG + chr8.4:66433737-66433756 MS.gene056792:intron 35.0%
! AAGTGGAGAGTATAACTGTA+TGG - chr8.4:66435193-66435212 None:intergenic 35.0%
! AGTAGCATTTTCACTAAGGT+TGG + chr8.4:66436872-66436891 MS.gene056792:intron 35.0%
! ATAGCTTTGCTGGATACTAA+TGG + chr8.4:66436380-66436399 MS.gene056792:intron 35.0%
! ATGATGATGTTGTTCCAACA+AGG + chr8.4:66433608-66433627 MS.gene056792:CDS 35.0%
! CAACAACTTTGCTGTCAATT+TGG - chr8.4:66435918-66435937 None:intergenic 35.0%
! CCAACCTGAATAAATGCTTT+TGG + chr8.4:66436690-66436709 MS.gene056792:intron 35.0%
! CTCAAGATTTTATGGACAAG+AGG + chr8.4:66438646-66438665 MS.gene056792:CDS 35.0%
! CTTTTACAGGTATGATTGGT+TGG + chr8.4:66437362-66437381 MS.gene056792:intron 35.0%
! GAAAGTGTAAACACATATGG+TGG + chr8.4:66437848-66437867 MS.gene056792:intron 35.0%
! GAATATGTTGCAGAAAGTGT+TGG + chr8.4:66435566-66435585 MS.gene056792:CDS 35.0%
! GTAGCATATGTGTTTCTGTT+TGG + chr8.4:66433550-66433569 MS.gene056792:CDS 35.0%
! GTTTGGAAGTATACTTGACA+GGG + chr8.4:66438158-66438177 MS.gene056792:intron 35.0%
! TGAGCAAGAGAAGCTTTTAA+AGG + chr8.4:66435317-66435336 MS.gene056792:CDS 35.0%
! TGTTTGGAAGTATACTTGAC+AGG + chr8.4:66438157-66438176 MS.gene056792:intron 35.0%
! TTAAACTTGATGGATGGACA+TGG + chr8.4:66437758-66437777 MS.gene056792:CDS 35.0%
! TTTGTCCAGAAGTATACTTC+TGG + chr8.4:66438193-66438212 MS.gene056792:intron 35.0%
! TTTTACATGGAGATCCTATG+TGG - chr8.4:66437259-66437278 None:intergenic 35.0%
! TTTTTGCATTGGAGGAATAG+AGG + chr8.4:66435712-66435731 MS.gene056792:CDS 35.0%
!! AAGGCCAAAAGCATTTATTC+AGG - chr8.4:66436697-66436716 None:intergenic 35.0%
!! ACGTGGATTTTTAGAAAGCA+TGG - chr8.4:66438134-66438153 None:intergenic 35.0%
!! ACTTTTCAAGATGGTTTGTG+AGG + chr8.4:66434966-66434985 MS.gene056792:CDS 35.0%
!! ATTCTGGTTTCTTGAAGTTC+TGG + chr8.4:66435682-66435701 MS.gene056792:CDS 35.0%
!! CCAAAAGCATTTATTCAGGT+TGG - chr8.4:66436693-66436712 None:intergenic 35.0%
!! CTGTACAGAACTTTTCAAGA+TGG + chr8.4:66434957-66434976 MS.gene056792:intron 35.0%
!! TTTTAGAAAGCATGGAGAAG+GGG - chr8.4:66438126-66438145 None:intergenic 35.0%
!! TTTTGTCGTGAAGTGTTAGA+TGG + chr8.4:66437601-66437620 MS.gene056792:intron 35.0%
!!! AGAAGTGTTTTTGTGGCTTA+TGG + chr8.4:66435233-66435252 MS.gene056792:CDS 35.0%
!!! ATGTTGCAGAAGTGTTTTTG+TGG + chr8.4:66435226-66435245 MS.gene056792:CDS 35.0%
!!! CAGTTTTTTTTCGGTACTCA+AGG - chr8.4:66438436-66438455 None:intergenic 35.0%
!!! GTTTTAAGAGATAGCTTTGC+TGG + chr8.4:66436370-66436389 MS.gene056792:intron 35.0%
AAAGTCCCAACTTGGATTGA+TGG + chr8.4:66434306-66434325 MS.gene056792:CDS 40.0%
AAATGAAGAGATGATGCCTC+GGG - chr8.4:66436274-66436293 None:intergenic 40.0%
AACGACAAGCATCATATGCA+TGG + chr8.4:66436063-66436082 MS.gene056792:CDS 40.0%
AACGCTGAATATGTTGGTGT+CGG + chr8.4:66434336-66434355 MS.gene056792:CDS 40.0%
ACCACGTTTGTTTGATCCTT+GGG + chr8.4:66436800-66436819 MS.gene056792:CDS 40.0%
ACTTCTGCAACATCAACCAA+TGG - chr8.4:66435219-66435238 None:intergenic 40.0%
AGCAAGTGTCAGATATGGAA+CGG - chr8.4:66436000-66436019 None:intergenic 40.0%
ATATGAGGACAATGCCTTTC+TGG - chr8.4:66438676-66438695 None:intergenic 40.0%
ATGGGATGATAACACAACGA+CGG - chr8.4:66438501-66438520 None:intergenic 40.0%
CAAGCATCATATGCATGGAT+TGG + chr8.4:66436068-66436087 MS.gene056792:CDS 40.0%
CACTGCAAATACTATGCAGA+AGG - chr8.4:66436030-66436049 None:intergenic 40.0%
CTTCTGCATAGTATTTGCAG+TGG + chr8.4:66436028-66436047 MS.gene056792:CDS 40.0%
CTTCTTTCTCTGTATCAGGT+TGG + chr8.4:66436432-66436451 MS.gene056792:intron 40.0%
CTTTGCTGGATACTAATGGA+TGG + chr8.4:66436384-66436403 MS.gene056792:intron 40.0%
GAAAATGCTACTACAAGTCC+CGG - chr8.4:66436864-66436883 None:intergenic 40.0%
GAATGGATGCAATAATCGCA+AGG + chr8.4:66435394-66435413 MS.gene056792:intron 40.0%
GAGAGCTTATGTCGTGTTTA+TGG - chr8.4:66437077-66437096 None:intergenic 40.0%
GCAAATATAGCTGATGAAGC+CGG + chr8.4:66434663-66434682 MS.gene056792:CDS 40.0%
GCATAGTATTTGCAGTGGTT+TGG + chr8.4:66436033-66436052 MS.gene056792:CDS 40.0%
GTAACAGCAAGTGTCAGATA+TGG - chr8.4:66436005-66436024 None:intergenic 40.0%
GTACAGCATAACCAAGAAAC+AGG - chr8.4:66435651-66435670 None:intergenic 40.0%
GTGCACCAAAATGATCTCAT+TGG - chr8.4:66434616-66434635 None:intergenic 40.0%
GTGGAAAACGCTGAATATGT+TGG + chr8.4:66434330-66434349 MS.gene056792:CDS 40.0%
GTTGGAACAGTCAAGAGATT+TGG + chr8.4:66433755-66433774 MS.gene056792:intron 40.0%
TAAGGGTCTACAAACTTGTC+TGG + chr8.4:66435814-66435833 MS.gene056792:intron 40.0%
TACCACGTTTGTTTGATCCT+TGG + chr8.4:66436799-66436818 MS.gene056792:CDS 40.0%
TATGGGTGTTCGTCTCTAAA+TGG + chr8.4:66436493-66436512 MS.gene056792:CDS 40.0%
TGTTCGCATACCAAATCTCA+AGG + chr8.4:66436231-66436250 MS.gene056792:CDS 40.0%
TTGTCATTGGGAAAGAAGAG+AGG + chr8.4:66438619-66438638 MS.gene056792:CDS 40.0%
TTTCGGGGACATAATCTTAC+CGG + chr8.4:66436842-66436861 MS.gene056792:CDS 40.0%
! GAGGCGATCTCAAGATTTTA+TGG + chr8.4:66438638-66438657 MS.gene056792:CDS 40.0%
! GCTCACCAATGAGATCATTT+TGG + chr8.4:66434608-66434627 MS.gene056792:intron 40.0%
! GTCGCTTTAAACTTGATGGA+TGG + chr8.4:66437752-66437771 MS.gene056792:CDS 40.0%
! TAAGAACAGGTGTTGTGCAT+GGG + chr8.4:66436318-66436337 MS.gene056792:intron 40.0%
! TCCAGAAGTATACTTCTGGA+GGG + chr8.4:66438197-66438216 MS.gene056792:intron 40.0%
! TTAAGAACAGGTGTTGTGCA+TGG + chr8.4:66436317-66436336 MS.gene056792:intron 40.0%
! TTTAGAAAGCATGGAGAAGG+GGG - chr8.4:66438125-66438144 None:intergenic 40.0%
! TTTTCTCTGTACAGGTAGCT+CGG + chr8.4:66436733-66436752 MS.gene056792:intron 40.0%
! TTTTTGTGGCTTATGGCTGT+TGG + chr8.4:66435240-66435259 MS.gene056792:CDS 40.0%
!! GGTTACAGCATCATTGGTTT+CGG + chr8.4:66436825-66436844 MS.gene056792:CDS 40.0%
!! GTGATGACGGAAATTAGAGA+CGG - chr8.4:66437653-66437672 None:intergenic 40.0%
!! GTTACAGCATCATTGGTTTC+GGG + chr8.4:66436826-66436845 MS.gene056792:CDS 40.0%
!! GTTTCTGTTTGGTGTGTCTT+TGG + chr8.4:66433561-66433580 MS.gene056792:CDS 40.0%
!! TTACAGCATCATTGGTTTCG+GGG + chr8.4:66436827-66436846 MS.gene056792:CDS 40.0%
!! TTAGGCTTGCTACAACAATC+AGG - chr8.4:66434435-66434454 None:intergenic 40.0%
!!! CTGGTGGTTCTTTTTTGCAT+TGG + chr8.4:66435701-66435720 MS.gene056792:CDS 40.0%
!!! GCAGGCACTTTTTTGTCATT+GGG + chr8.4:66438607-66438626 MS.gene056792:intron 40.0%
!!! GTGGTTCTTTTTTGCATTGG+AGG + chr8.4:66435704-66435723 MS.gene056792:CDS 40.0%
!!! GTTTGGTGTGTCTTTGGTTT+TGG + chr8.4:66433567-66433586 MS.gene056792:CDS 40.0%
!!! TGCAGGCACTTTTTTGTCAT+TGG + chr8.4:66438606-66438625 MS.gene056792:intron 40.0%
AATGAAGAGATGATGCCTCG+GGG - chr8.4:66436273-66436292 None:intergenic 45.0%
AATGAGAATGGCTGAAGCAC+CGG - chr8.4:66434685-66434704 None:intergenic 45.0%
ACATCAACCAATGGACGAAG+TGG - chr8.4:66435210-66435229 None:intergenic 45.0%
ACGTGGTAACTTGAGAAGCA+TGG - chr8.4:66436787-66436806 None:intergenic 45.0%
ATACTCTCCACTTCGTCCAT+TGG + chr8.4:66435200-66435219 MS.gene056792:CDS 45.0%
ATGATTTGAAAGTTCCCCCG+AGG + chr8.4:66436255-66436274 MS.gene056792:intron 45.0%
CCACACCATCAATCCAAGTT+GGG - chr8.4:66434314-66434333 None:intergenic 45.0%
CCACGTTTGTTTGATCCTTG+GGG + chr8.4:66436801-66436820 MS.gene056792:CDS 45.0%
CCATGCAGCGAGTTTATTTC+GGG - chr8.4:66438286-66438305 None:intergenic 45.0%
CCCATCCCCTATAGTTAGTT+CGG - chr8.4:66438253-66438272 None:intergenic 45.0%
CCGAACTAACTATAGGGGAT+GGG + chr8.4:66438250-66438269 MS.gene056792:intron 45.0%
CCTTTGCACTGTTCATGCAA+AGG - chr8.4:66437927-66437946 None:intergenic 45.0%
CCTTTGCATGAACAGTGCAA+AGG + chr8.4:66437924-66437943 MS.gene056792:intron 45.0%
CTATATAGAGCAAAGCTGGC+TGG - chr8.4:66437784-66437803 None:intergenic 45.0%
GCAATGACTGCTTATGGTCT+AGG + chr8.4:66437420-66437439 MS.gene056792:CDS 45.0%
GCCATGCAGCGAGTTTATTT+CGG - chr8.4:66438287-66438306 None:intergenic 45.0%
GGGACTATATAGAGCAAAGC+TGG - chr8.4:66437788-66437807 None:intergenic 45.0%
GGTGATAAGAGTGGAGAAGA+CGG + chr8.4:66436756-66436775 MS.gene056792:CDS 45.0%
GTTAGGTCAAAGTCCCAACT+TGG + chr8.4:66434298-66434317 MS.gene056792:intron 45.0%
GTTATGCTTCCACAAGATGC+TGG + chr8.4:66435024-66435043 MS.gene056792:CDS 45.0%
TATGGAACGGCTCCAAAGAA+CGG - chr8.4:66435987-66436006 None:intergenic 45.0%
TCCACACCATCAATCCAAGT+TGG - chr8.4:66434315-66434334 None:intergenic 45.0%
TCCGAACTAACTATAGGGGA+TGG + chr8.4:66438249-66438268 MS.gene056792:intron 45.0%
TTCGGGGACATAATCTTACC+GGG + chr8.4:66436843-66436862 MS.gene056792:CDS 45.0%
TTGCTCAATAGCAGCTTCTC+TGG - chr8.4:66435304-66435323 None:intergenic 45.0%
TTTCTCTGTACAGGTAGCTC+GGG + chr8.4:66436734-66436753 MS.gene056792:intron 45.0%
! AAGAACAGGTGTTGTGCATG+GGG + chr8.4:66436319-66436338 MS.gene056792:intron 45.0%
! AGTATTTGCAGTGGTTTGGG+CGG + chr8.4:66436037-66436056 MS.gene056792:CDS 45.0%
! CGTGGTAACTTGAGAAGCAT+GGG - chr8.4:66436786-66436805 None:intergenic 45.0%
! CTCTAGCTCATTCAACTCTC+AGG - chr8.4:66438309-66438328 None:intergenic 45.0%
! CTGGTTTCTTGAAGTTCTGG+TGG + chr8.4:66435685-66435704 MS.gene056792:CDS 45.0%
! GTCCAGAAGTATACTTCTGG+AGG + chr8.4:66438196-66438215 MS.gene056792:intron 45.0%
! GTGCTTCTTATTGGTCTGCT+TGG + chr8.4:66435274-66435293 MS.gene056792:CDS 45.0%
! TCTTGTGGAAGCATAACAGC+AGG - chr8.4:66435021-66435040 None:intergenic 45.0%
! TGTGCTTGCTTCCTGTTTCT+TGG + chr8.4:66435637-66435656 MS.gene056792:CDS 45.0%
! TTAGAAAGCATGGAGAAGGG+GGG - chr8.4:66438124-66438143 None:intergenic 45.0%
!!! TTTTTTTTTTAATGATTTTT+GGG + chr8.4:66434751-66434770 MS.gene056792:intron 5.0%
!!! TTTTTTTTTTTAATGATTTT+TGG + chr8.4:66434750-66434769 MS.gene056792:intron 5.0%
ATGAAGAGATGATGCCTCGG+GGG - chr8.4:66436272-66436291 None:intergenic 50.0%
ATGATGCTGTAACCACCCCA+AGG - chr8.4:66436819-66436838 None:intergenic 50.0%
CCACTATCATCACGCTCTCA+TGG - chr8.4:66436524-66436543 None:intergenic 50.0%
CCCCAAGGATCAAACAAACG+TGG - chr8.4:66436804-66436823 None:intergenic 50.0%
CCCGAAATAAACTCGCTGCA+TGG + chr8.4:66438283-66438302 MS.gene056792:intron 50.0%
CGTTTGTTTGATCCTTGGGG+TGG + chr8.4:66436804-66436823 MS.gene056792:CDS 50.0%
GATGTTGTTCCAACAAGGCC+TGG + chr8.4:66433613-66433632 MS.gene056792:CDS 50.0%
GGACAAGAGGAGAACCAGAA+AGG + chr8.4:66438659-66438678 MS.gene056792:CDS 50.0%
GGGTCTACAAACTTGTCTGG+CGG + chr8.4:66435817-66435836 MS.gene056792:intron 50.0%
GGGTGTTCGTCTCTAAATGG+TGG + chr8.4:66436496-66436515 MS.gene056792:CDS 50.0%
GTCTGGCGGCTCTATTATCA+TGG + chr8.4:66435831-66435850 MS.gene056792:CDS 50.0%
GTGTGGGCAATGACTGCTTA+TGG + chr8.4:66437414-66437433 MS.gene056792:CDS 50.0%
TCCAAGAGATGTCAGCTGCT+TGG - chr8.4:66438468-66438487 None:intergenic 50.0%
TCCAAGCAGCTGACATCTCT+TGG + chr8.4:66438464-66438483 MS.gene056792:intron 50.0%
TGGGGTGGTTACAGCATCAT+TGG + chr8.4:66436819-66436838 MS.gene056792:CDS 50.0%
TTCTCTGTACAGGTAGCTCG+GGG + chr8.4:66436735-66436754 MS.gene056792:intron 50.0%
! CCATGAGAGCGTGATGATAG+TGG + chr8.4:66436521-66436540 MS.gene056792:CDS 50.0%
! GCCCTCCAGAAGTATACTTC+TGG - chr8.4:66438201-66438220 None:intergenic 50.0%
! TGCAAGATTCGGTCCTACGT+TGG + chr8.4:66434359-66434378 MS.gene056792:CDS 50.0%
! TTCTCACAACCAGGCCTTGT+TGG - chr8.4:66433625-66433644 None:intergenic 50.0%
!! CCCAACTTGGATTGATGGTG+TGG + chr8.4:66434311-66434330 MS.gene056792:CDS 50.0%
!! GAGATCATTTTGGTGCACCG+AGG + chr8.4:66434618-66434637 MS.gene056792:CDS 50.0%
!! GCAGAAAGTGTTGGTTCTCG+TGG + chr8.4:66435575-66435594 MS.gene056792:CDS 50.0%
!! GGCTTGCTACAACAATCAGG+AGG - chr8.4:66434432-66434451 None:intergenic 50.0%
!! GTTGGTGTCGGTGCAAGATT+CGG + chr8.4:66434348-66434367 MS.gene056792:CDS 50.0%
!! TGTTGGTTCTCGTGGTTACG+TGG + chr8.4:66435583-66435602 MS.gene056792:CDS 50.0%
!!! GGTGTGTCTTTGGTTTTGGC+TGG + chr8.4:66433571-66433590 MS.gene056792:CDS 50.0%
CCGAGCTGGATACTTCGTGT+GGG + chr8.4:66437398-66437417 MS.gene056792:CDS 55.0%
GCAAAGAAGAACCTCCGAGC+TGG + chr8.4:66437384-66437403 MS.gene056792:CDS 55.0%
GTAGCTCGGGGTGATAAGAG+TGG + chr8.4:66436747-66436766 MS.gene056792:CDS 55.0%
TCCGAGCTGGATACTTCGTG+TGG + chr8.4:66437397-66437416 MS.gene056792:CDS 55.0%
! ACACGAAGTATCCAGCTCGG+AGG - chr8.4:66437398-66437417 None:intergenic 55.0%
! CCCACACGAAGTATCCAGCT+CGG - chr8.4:66437401-66437420 None:intergenic 55.0%
AGGGGAAGGAAGCAGCGTCA+AGG - chr8.4:66436611-66436630 None:intergenic 60.0%
GGAGAAGGGGGGAGAAGCTC+CGG - chr8.4:66438113-66438132 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 66433517 66438729 66433517 ID=MS.gene056792
chr8.4 mRNA 66433517 66438729 66433517 ID=MS.gene056792.t1;Parent=MS.gene056792
chr8.4 exon 66433517 66433657 66433517 ID=MS.gene056792.t1.exon1;Parent=MS.gene056792.t1
chr8.4 CDS 66433517 66433657 66433517 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66434303 66434461 66434303 ID=MS.gene056792.t1.exon2;Parent=MS.gene056792.t1
chr8.4 CDS 66434303 66434461 66434303 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66434609 66434720 66434609 ID=MS.gene056792.t1.exon3;Parent=MS.gene056792.t1
chr8.4 CDS 66434609 66434720 66434609 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66434965 66435084 66434965 ID=MS.gene056792.t1.exon4;Parent=MS.gene056792.t1
chr8.4 CDS 66434965 66435084 66434965 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66435187 66435338 66435187 ID=MS.gene056792.t1.exon5;Parent=MS.gene056792.t1
chr8.4 CDS 66435187 66435338 66435187 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66435554 66435733 66435554 ID=MS.gene056792.t1.exon6;Parent=MS.gene056792.t1
chr8.4 CDS 66435554 66435733 66435554 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66435818 66435852 66435818 ID=MS.gene056792.t1.exon7;Parent=MS.gene056792.t1
chr8.4 CDS 66435818 66435852 66435818 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66435941 66436103 66435941 ID=MS.gene056792.t1.exon8;Parent=MS.gene056792.t1
chr8.4 CDS 66435941 66436103 66435941 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66436199 66436252 66436199 ID=MS.gene056792.t1.exon9;Parent=MS.gene056792.t1
chr8.4 CDS 66436199 66436252 66436199 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66436450 66436542 66436450 ID=MS.gene056792.t1.exon10;Parent=MS.gene056792.t1
chr8.4 CDS 66436450 66436542 66436450 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66436747 66436889 66436747 ID=MS.gene056792.t1.exon11;Parent=MS.gene056792.t1
chr8.4 CDS 66436747 66436889 66436747 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66437371 66437441 66437371 ID=MS.gene056792.t1.exon12;Parent=MS.gene056792.t1
chr8.4 CDS 66437371 66437441 66437371 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66437735 66437818 66437735 ID=MS.gene056792.t1.exon13;Parent=MS.gene056792.t1
chr8.4 CDS 66437735 66437818 66437735 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
chr8.4 exon 66438611 66438729 66438611 ID=MS.gene056792.t1.exon14;Parent=MS.gene056792.t1
chr8.4 CDS 66438611 66438729 66438611 ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1
Gene Sequence

>MS.gene056792

ATGGTTTCATTGGGAGTTATATATAGTAATATTGTAGCATATGTGTTTCTGTTTGGTGTGTCTTTGGTTTTGGCTGGTGATATAGTTCATCATGATGATGTTGTTCCAACAAGGCCTGGTTGTGAGAATAACTTTGTTCTGGTACCAAATTTTTTATTCTTCATATATGAATTGTTTAAAAAAATGTTTTTTATGTGTGATTTTGATCTTGGTTTTGTTTTTTGCTTGCTTAGAAACTGTTGGAACAGTCAAGAGATTTGGAAATCATAGTAAAAAATCATTTTTTTAATTGAGGAAAGAAAAATTGGACTGTTTGGTGGGATTAATTCTTTTATAATTGTTTTTGGTACTTGATTTGAACTTTCTGTTTTTTAAGGGCTAATTGAATTGACTTATTTACTAATATAAGTTCTTCTGAGACTATTTGGTAGAACTTATGAAAATGGCTTTTGACATGTCAATATGTTGTTTTCAGCTTATTTTCATAGATTCTCTAAAATAGTTTAAGAAAGCAACTTATAGCTTATATCAAAATGACTAGACTTTATTTTATCCTTGTGTGATGTATGCTCAATTAAAATTCTCTTTCTCCTGTTATTGAAAATGATATGATTGCTTGAATTTTAGATTTTTTTAGAAAATAGAGTGTAGTTAGGTAATTAGAACAGTATATTTCATGTACTGACTCTGAGAAACAAAATCTGCAAATGTATTGTCTTATGGTTTCTTGAATTTGAAGTAAACTTTTATGCAATGTGGTCTGTTGCTAACAAAATGTTCTGTTAGGTCAAAGTCCCAACTTGGATTGATGGTGTGGAAAACGCTGAATATGTTGGTGTCGGTGCAAGATTCGGTCCTACGTTGGAATCAAAAGAAAAACATGCCAATCATACTAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTAGCAAGCCTAAGAATAAGGTATTTTGACTTCATTTTTAAACCATAGAATTTACCAAATGCAACGTTACTGAATTGTGAAGCATCGTTGTCTTGATCGAAAGCTTTATTATTTGAAAGTATTTTGTTAATCTGTTATTTATTTGTTTTGCTTTTCACTATTGTTAGCTCACCAATGAGATCATTTTGGTGCACCGAGGAAAATGTAGTTTCACAACCAAGGCAAATATAGCTGATGAAGCCGGTGCTTCAGCCATTCTCATTATAAATTATCGTACAGGTGTTTTATGTGTTTTTGCTTTGTTCTGATTTTTTTTTTTAATGATTTTTGGGATCTTATATTATATTTTGTTCTTCATTTGTCAATTAGTGATCTTTAGGATCATAGGTGCCAAAAATGATGAATAATTTTATTCATTGTTTGTTATTAGATTAAACAGAGAAATTTCCAATCAATCTGTTGAATATTTAATTTATGCTATGGTGTTTATTTTAAGAAACGATTGTATATTGTTACTGTACAGAACTTTTCAAGATGGTTTGTGAGGAAAATGAAACTGATGTTGATATTGGAATACCTGCTGTTATGCTTCCACAAGATGCTGGATTAAACTTGGAAAGACACATACAAAATAACTCCATAGGTATGTTCAACTTTCTCAGAAGTGTCACTAATGTTGTAATTTGTTGTTGCTTTATGTTTTGACACCCTTTGTTCTATTGCATGTACAATTCTTGCTCCTAAGTGTCCATACAGTTATACTCTCCACTTCGTCCATTGGTTGATGTTGCAGAAGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTTTATGTGCTTCTTATTGGTCTGCTTGGACTGCCAGAGAAGCTGCTATTGAGCAAGAGAAGCTTTTAAAGGTTACCTAGTTTCTTTTCATGCCAATCTTTCACACTAAAAGATAAAGTGAAGAAAGAATGGATGCAATAATCGCAAGGATAAGATATTTGCTTTAGCAAGATAGAGACAAACAATAACCGGGAGAAAGTGTTTTTTATGTTAAGGAGTATTTCTGCTTATATTTATAAACTCGTTAATTTGATTACTGATATATAAATTACTTTTATGGTTGCAGGATGCTTCAGATGAATATGTTGCAGAAAGTGTTGGTTCTCGTGGTTACGTGGAAATCAGTACTACAGCAGCAATTTTATTTGTTGTGCTTGCTTCCTGTTTCTTGGTTATGCTGTACAAATTAATGTCATTCTGGTTTCTTGAAGTTCTGGTGGTTCTTTTTTGCATTGGAGGAATAGAGGTGAGTTACTCTTGTTTTCAACTTTGTTCATGTTGATTAAAGTTTGTCTCTCCCTCTAATATTTGTATGTTCATATGCTTTAAGGGTCTACAAACTTGTCTGGCGGCTCTATTATCATGGTAAGTCGTTTATCCTTGAAGTTTGTTGTTGTAGATTATGAGGTTTGTCCTATTATTTCTATCCAAATTGACAGCAAAGTTGTTGTAGTTTCAGATGGTTTCAATATCCTGCACAAACATATGTGAAGATACCGTTCTTTGGAGCCGTTCCATATCTGACACTTGCTGTTACTCCCTTCTGCATAGTATTTGCAGTGGTTTGGGCGGTTAAACGACAAGCATCATATGCATGGATTGGTCAAGATATTCTTGTAAGAATTGTTTTATTATTGTCACTTTATCATTTAGTTAAAAAAAATCCCTAGACTTTTAGTAACATTTTCTATATTGCTTGACTATCATTCAGGGTATTGCATTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTCAAGGTATGATTTGAAAGTTCCCCCGAGGCATCATCTCTTCATTTACTTGTTTTTGATACTCTTGGATTTAAGAACAGGTGTTGTGCATGGGGCATTTATAAACAGTTAAATCGGCAAAATGTTTTAAGAGATAGCTTTGCTGGATACTAATGGATGGTTAGTATGAAAGACACTGAAATATACTTCTTTCTCTGTATCAGGTTGGGACTGTTCTTCTCAGTTGTGCTTTCCTATATGACATCTTATGGGTGTTCGTCTCTAAATGGTGGTTCCATGAGAGCGTGATGATAGTGGTGAGTGTTTTGAATAAAGCTCTCTCTTCTCTACTGTTATCTACAATGCTTGATTTTGGTCTTAACCTTGACGCTGCTTCCTTCCCCTTATTTTTATTTTTGTTGAAGAAACGGAGATTATAGTAAAATGGGAACACAAGTGGTTTTCCAACCTGAATAAATGCTTTTGGCCTTATAATTAGTATTGAGTTTTTCTCTGTACAGGTAGCTCGGGGTGATAAGAGTGGAGAAGACGGTATTCCCATGCTTCTCAAGTTACCACGTTTGTTTGATCCTTGGGGTGGTTACAGCATCATTGGTTTCGGGGACATAATCTTACCGGGACTTGTAGTAGCATTTTCACTAAGGTTGGTCATCTATTGATCATACAATATATGTATGTGGCCTTCTATTCACCTTGTGTTACTTATGTTTTTTTTATGATAAAGAGGACGTTTGGGTAGATATATTTTTCAAGTGCTTATTCAATATGTGATTATTATTATTATTACAGAAAAGTATAAGTTGTTTTTACAATTGAAGAGGAAACAACCATAAACACGACATAAGCTCTCCATGAGCCGTTTCTATAATCTATCTTGGTGAGCTTATGAAAATAAGTTGAAAGCAGCTCATTAACATATTATAAGCTATTTCAATAGGCTCTTCCATTACCTACGTTTTAATGTCAAAATAAACTCATATGCTCTTCCAAACGTCCATAAAATACATCTCCACATAGGATCTCCATGTAAAAAAGAATAGGTACATGGAGAAAACAATTGCATTGTGCTGTATAATGTTAACGGTTCGCGAACTTTACTAGTCTATTGACAACTACTTTTACAGGTATGATTGGTTGGCAAAGAAGAACCTCCGAGCTGGATACTTCGTGTGGGCAATGACTGCTTATGGTCTAGGTATGATACACATATGATTTGGGGATAACATTCATGACAAAATGTGAATGTATACTGTTTACTCATGTTTCTAATCTTCACTTGTGGAGGTGTCTAACAGCAAAAGTTACGACAGTGACGAAAATTTCGAGATGAAAAAAATATGAAATCCGTTTCTAATTTTGTCGTGAAGTGTTAGATGGAAAATTGGATGACCACTTTTATTTTTCCGTCTCTAATTTCCGTCATCACTTCAATTTTTCTTGTAGTTATTGGCTTTCCCATATGTGTTATTCGTTGAATTTTATATGCAGGTCTCCTCATCACATATGTCGCTTTAAACTTGATGGATGGACATGGCCAGCCAGCTTTGCTCTATATAGTCCCATTTACACTTGGTAAGTATAACCATCTTACTCATAAATTTGAAAGTGTAAACACATATGGTGGCATTCTATTCTTCAATGTATTATTTGGTTGTGTTCTATTGGTTGTTCAAGTTGCCTTTGCATGAACAGTGCAAAGGTTCAACCATCAATATGATCGGTTCACATTTTGGTCTCGAGACAATAAAGAGTTGTGTTGGACAGATTACAACAAATATAAAATTTTGTTGAATCATTCTGCAAGATGTACCAAAATAATGCTGTGCTAACTATATGTTGTGTTACTCATTTATTACAAAATAACCGGAGCTTCTCCCCCCTTCTCCATGCTTTCTAAAAATCCACGTAGATGTTTGGAAGTATACTTGACAGGGAAAAACTGTGTTTTTGTCCAGAAGTATACTTCTGGAGGGCAAAAATCTGTTTTTATCAGAAGTATACTTCCGAACTAACTATAGGGGATGGGAAAAGAAGCTCCCGAAATAAACTCGCTGCATGGCCTGAGAGTTGAATGAGCTAGAGTTACAAAATAAGTTCTTAATTGCATATATGGATGGATGCAGATAAAGAAGTAAAATGCTTTTACTGATTTTAGTTTCCAATAGATGGCAATAATGTAGACTGGTCCTTGAGTACCGAAAAAAAACTGTAAATTGGTCCAAGCAGCTGACATCTCTTGGACAAAACTTGACCGTCGTTGTGTTATCATCCCATGTGACTATGACATAGCAATAGCATACATTTATTTATTGCATGACATGAAAACTATTTTCTGAAACATTGTCATGTAAATCATAATTGCAGGCACTTTTTTGTCATTGGGAAAGAAGAGAGGCGATCTCAAGATTTTATGGACAAGAGGAGAACCAGAAAGGCATTGTCCTCATATTGAAGAAGTTAACCAATCAATTAACCAACATTGA

Protein sequence

>MS.gene056792.t1

MVSLGVIYSNIVAYVFLFGVSLVLAGDIVHHDDVVPTRPGCENNFVLVKVPTWIDGVENAEYVGVGARFGPTLESKEKHANHTRVVMADPPDCCSKPKNKLTNEIILVHRGKCSFTTKANIADEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQDAGLNLERHIQNNSIVSIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAIEQEKLLKDASDEYVAESVGSRGYVEISTTAAILFVVLASCFLVMLYKLMSFWFLEVLVVLFCIGGIEGLQTCLAALLSCFRWFQYPAQTYVKIPFFGAVPYLTLAVTPFCIVFAVVWAVKRQASYAWIGQDILGIALIITVLQIVRIPNLKVGTVLLSCAFLYDILWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKLPRLFDPWGGYSIIGFGDIILPGLVVAFSLRYDWLAKKNLRAGYFVWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGDLKILWTRGEPERHCPHIEEVNQSINQH