Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056792.t1 | XP_003627574.2 | 99.3 | 541 | 4 | 0 | 1 | 541 | 1 | 541 | 0.00E+00 | 1076.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056792.t1 | Q0WMJ8 | 74.0 | 538 | 134 | 2 | 6 | 537 | 2 | 539 | 1.4e-234 | 813.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056792.t1 | G7LBR2 | 99.3 | 541 | 4 | 0 | 1 | 541 | 1 | 541 | 0.0e+00 | 1076.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056792 | MS.gene062100 | 0.801614 | 8.29E-49 | -1.69E-46 |
MS.gene056792 | MS.gene070614 | 0.802749 | 4.84E-49 | -1.69E-46 |
MS.gene056792 | MS.gene071822 | 0.810545 | 1.09E-50 | -1.69E-46 |
MS.gene056792 | MS.gene20110 | 0.832989 | 6.90E-56 | -1.69E-46 |
MS.gene056792 | MS.gene21461 | 0.804405 | 2.19E-49 | -1.69E-46 |
MS.gene056792 | MS.gene24908 | 0.801652 | 8.14E-49 | -1.69E-46 |
MS.gene056792 | MS.gene30774 | 0.829353 | 5.40E-55 | -1.69E-46 |
MS.gene056792 | MS.gene31397 | 0.812851 | 3.44E-51 | -1.69E-46 |
MS.gene056792 | MS.gene31464 | 0.811513 | 6.74E-51 | -1.69E-46 |
MS.gene056792 | MS.gene36313 | 0.818076 | 2.37E-52 | -1.69E-46 |
MS.gene056792 | MS.gene57509 | 0.824632 | 7.27E-54 | -1.69E-46 |
MS.gene056792 | MS.gene60171 | 0.816665 | 4.92E-52 | -1.69E-46 |
MS.gene056792 | MS.gene60681 | 0.813569 | 2.39E-51 | -1.69E-46 |
MS.gene056792 | MS.gene68999 | 0.803967 | 2.71E-49 | -1.69E-46 |
MS.gene056792 | MS.gene72268 | 0.803268 | 3.78E-49 | -1.69E-46 |
MS.gene056792 | MS.gene73250 | 0.805374 | 1.38E-49 | -1.69E-46 |
MS.gene056792 | MS.gene82701 | 0.816857 | 4.45E-52 | -1.69E-46 |
MS.gene056792 | MS.gene98206 | 0.834841 | 2.37E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene000340 | MS.gene056792 | PPI |
MS.gene056792 | MS.gene66501 | PPI |
MS.gene97784 | MS.gene056792 | PPI |
MS.gene54352 | MS.gene056792 | PPI |
MS.gene000692 | MS.gene056792 | PPI |
MS.gene056792 | MS.gene81179 | PPI |
MS.gene33224 | MS.gene056792 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056792.t1 | MTR_8g030680 | 99.261 | 541 | 4 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1102 |
MS.gene056792.t1 | MTR_8g030680 | 99.560 | 455 | 2 | 0 | 87 | 541 | 1 | 455 | 0.0 | 929 |
MS.gene056792.t1 | MTR_7g077800 | 81.025 | 527 | 98 | 2 | 15 | 540 | 12 | 537 | 0.0 | 885 |
MS.gene056792.t1 | MTR_6g463340 | 71.236 | 518 | 145 | 3 | 20 | 536 | 23 | 537 | 0.0 | 760 |
MS.gene056792.t1 | MTR_7g077800 | 81.364 | 440 | 80 | 2 | 15 | 453 | 12 | 450 | 0.0 | 732 |
MS.gene056792.t1 | MTR_7g077800 | 82.000 | 400 | 70 | 2 | 142 | 540 | 1 | 399 | 0.0 | 674 |
MS.gene056792.t1 | MTR_6g463340 | 72.390 | 431 | 116 | 2 | 107 | 536 | 1 | 429 | 0.0 | 640 |
MS.gene056792.t1 | MTR_7g077800 | 77.628 | 371 | 81 | 2 | 15 | 384 | 12 | 381 | 0.0 | 587 |
MS.gene056792.t1 | MTR_7g405780 | 50.000 | 500 | 245 | 3 | 25 | 522 | 30 | 526 | 1.41e-172 | 499 |
MS.gene056792.t1 | MTR_7g405780 | 49.793 | 482 | 237 | 3 | 25 | 504 | 30 | 508 | 5.16e-166 | 481 |
MS.gene056792.t1 | MTR_1g116953 | 45.041 | 484 | 259 | 4 | 40 | 520 | 30 | 509 | 6.99e-148 | 435 |
MS.gene056792.t1 | MTR_7g405780 | 49.070 | 430 | 214 | 3 | 25 | 452 | 30 | 456 | 7.33e-144 | 422 |
MS.gene056792.t1 | MTR_7g405780 | 48.946 | 427 | 213 | 3 | 25 | 449 | 30 | 453 | 3.14e-142 | 418 |
MS.gene056792.t1 | MTR_1g100980 | 26.149 | 348 | 184 | 12 | 241 | 539 | 47 | 370 | 1.60e-22 | 99.8 |
MS.gene056792.t1 | MTR_3g109932 | 31.959 | 194 | 117 | 5 | 348 | 541 | 161 | 339 | 1.23e-20 | 93.6 |
MS.gene056792.t1 | MTR_3g109932 | 35.897 | 156 | 85 | 5 | 348 | 503 | 161 | 301 | 4.68e-20 | 91.7 |
MS.gene056792.t1 | MTR_1g008280 | 31.500 | 200 | 118 | 6 | 338 | 537 | 155 | 335 | 2.75e-19 | 90.1 |
MS.gene056792.t1 | MTR_1g008280 | 31.293 | 147 | 83 | 5 | 338 | 484 | 155 | 283 | 2.38e-13 | 71.2 |
MS.gene056792.t1 | MTR_3g109968 | 33.333 | 111 | 71 | 2 | 431 | 541 | 25 | 132 | 2.50e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056792.t1 | AT1G01650 | 73.978 | 538 | 134 | 2 | 6 | 537 | 2 | 539 | 0.0 | 835 |
MS.gene056792.t1 | AT1G63690 | 74.125 | 514 | 131 | 1 | 23 | 536 | 25 | 536 | 0.0 | 790 |
MS.gene056792.t1 | AT1G63690 | 73.930 | 514 | 132 | 1 | 23 | 536 | 25 | 536 | 0.0 | 789 |
MS.gene056792.t1 | AT1G01650 | 76.574 | 397 | 92 | 1 | 142 | 537 | 1 | 397 | 0.0 | 635 |
MS.gene056792.t1 | AT1G01650 | 76.574 | 397 | 92 | 1 | 142 | 537 | 1 | 397 | 0.0 | 635 |
MS.gene056792.t1 | AT1G01650 | 76.574 | 397 | 92 | 1 | 142 | 537 | 1 | 397 | 0.0 | 635 |
MS.gene056792.t1 | AT2G43070 | 47.338 | 526 | 272 | 3 | 8 | 530 | 11 | 534 | 1.69e-159 | 465 |
MS.gene056792.t1 | AT2G43070 | 47.338 | 526 | 272 | 3 | 8 | 530 | 70 | 593 | 1.57e-158 | 465 |
MS.gene056792.t1 | AT2G43070 | 46.992 | 532 | 271 | 4 | 8 | 530 | 11 | 540 | 6.08e-158 | 462 |
MS.gene056792.t1 | AT2G43070 | 46.992 | 532 | 271 | 4 | 8 | 530 | 70 | 599 | 4.09e-157 | 462 |
MS.gene056792.t1 | AT1G05820 | 43.811 | 509 | 279 | 3 | 31 | 537 | 30 | 533 | 3.35e-144 | 426 |
MS.gene056792.t1 | AT1G05820 | 44.632 | 475 | 259 | 2 | 31 | 503 | 30 | 502 | 1.63e-139 | 413 |
MS.gene056792.t1 | AT1G05820 | 45.477 | 398 | 210 | 3 | 142 | 537 | 1 | 393 | 4.13e-119 | 357 |
MS.gene056792.t1 | AT1G05820 | 40.584 | 377 | 220 | 2 | 31 | 405 | 30 | 404 | 2.28e-90 | 284 |
MS.gene056792.t1 | AT4G33410 | 26.074 | 326 | 177 | 11 | 241 | 519 | 47 | 355 | 1.37e-23 | 103 |
MS.gene056792.t1 | AT2G03120 | 33.684 | 190 | 111 | 5 | 348 | 537 | 161 | 335 | 3.00e-22 | 98.6 |
Find 121 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATATGAGGACAATGCCTTTC+TGG | 0.135793 | 8.4:-66438673 | None:intergenic |
TGTGCTTGCTTCCTGTTTCT+TGG | 0.229721 | 8.4:+66435637 | MS.gene056792:CDS |
CTTTCCTATATGACATCTTA+TGG | 0.233407 | 8.4:+66436475 | MS.gene056792:CDS |
TTATACTTACCAAGTGTAAA+TGG | 0.235488 | 8.4:-66437806 | None:intergenic |
GTTTGGTGTGTCTTTGGTTT+TGG | 0.248253 | 8.4:+66433567 | MS.gene056792:CDS |
GTTACAGCATCATTGGTTTC+GGG | 0.276829 | 8.4:+66436826 | MS.gene056792:CDS |
TGTACAAATTAATGTCATTC+TGG | 0.277038 | 8.4:+66435666 | MS.gene056792:CDS |
GCTCACCAATGAGATCATTT+TGG | 0.282959 | 8.4:+66434608 | MS.gene056792:intron |
GGTTACAGCATCATTGGTTT+CGG | 0.284269 | 8.4:+66436825 | MS.gene056792:CDS |
ACCACGTTTGTTTGATCCTT+GGG | 0.292106 | 8.4:+66436800 | MS.gene056792:CDS |
AGTCAAAATACCTTATTCTT+AGG | 0.296947 | 8.4:-66434450 | None:intergenic |
ATATGTCGCTTTAAACTTGA+TGG | 0.299572 | 8.4:+66437748 | MS.gene056792:CDS |
CATAGTATTTGCAGTGGTTT+GGG | 0.300952 | 8.4:+66436034 | MS.gene056792:CDS |
GCATAGTATTTGCAGTGGTT+TGG | 0.301464 | 8.4:+66436033 | MS.gene056792:CDS |
GTTTCTGTTTGGTGTGTCTT+TGG | 0.311149 | 8.4:+66433561 | MS.gene056792:CDS |
TCAAATCATACCTTGAGATT+TGG | 0.314981 | 8.4:-66436241 | None:intergenic |
TATGTGAAGATACCGTTCTT+TGG | 0.317072 | 8.4:+66435972 | MS.gene056792:CDS |
CCAATAAGAAGCACATAAAA+TGG | 0.329319 | 8.4:-66435265 | None:intergenic |
ATCAATGTTGGTTAATTGAT+TGG | 0.335483 | 8.4:-66438708 | None:intergenic |
TGGGGTGGTTACAGCATCAT+TGG | 0.340318 | 8.4:+66436819 | MS.gene056792:CDS |
AATGAAACTGATGTTGATAT+TGG | 0.345185 | 8.4:+66434991 | MS.gene056792:CDS |
AATTCTTAGAATGGTTTCAT+TGG | 0.353819 | 8.4:+66433507 | None:intergenic |
TTGTGAGAATAACTTTGTTC+TGG | 0.354785 | 8.4:+66433636 | MS.gene056792:CDS |
ATTCTGGTTTCTTGAAGTTC+TGG | 0.356705 | 8.4:+66435682 | MS.gene056792:CDS |
TTGTAGCAAGCCTAAGAATA+AGG | 0.358188 | 8.4:+66434440 | MS.gene056792:CDS |
GTGCTTCTTATTGGTCTGCT+TGG | 0.367692 | 8.4:+66435274 | MS.gene056792:CDS |
TTCTCACAACCAGGCCTTGT+TGG | 0.376878 | 8.4:-66433622 | None:intergenic |
TTTCCTATATGACATCTTAT+GGG | 0.378805 | 8.4:+66436476 | MS.gene056792:CDS |
TACCACGTTTGTTTGATCCT+TGG | 0.389231 | 8.4:+66436799 | MS.gene056792:CDS |
TGGTTAACTTCTTCAATATG+AGG | 0.390926 | 8.4:-66438688 | None:intergenic |
TATGGGTGTTCGTCTCTAAA+TGG | 0.393668 | 8.4:+66436493 | MS.gene056792:CDS |
TTTCGGGGACATAATCTTAC+CGG | 0.395970 | 8.4:+66436842 | MS.gene056792:CDS |
GTGTGGGCAATGACTGCTTA+TGG | 0.406868 | 8.4:+66437414 | MS.gene056792:CDS |
TTGCTCAATAGCAGCTTCTC+TGG | 0.407570 | 8.4:-66435301 | None:intergenic |
GTAGCATATGTGTTTCTGTT+TGG | 0.410692 | 8.4:+66433550 | MS.gene056792:CDS |
ATTCTTAGAATGGTTTCATT+GGG | 0.419905 | 8.4:+66433508 | None:intergenic |
TTAGGCTTGCTACAACAATC+AGG | 0.422579 | 8.4:-66434432 | None:intergenic |
TTCATCAGCTATATTTGCCT+TGG | 0.424615 | 8.4:-66434658 | None:intergenic |
CATGACAACTCTAGTATGAT+TGG | 0.435387 | 8.4:-66434400 | None:intergenic |
CCACACCATCAATCCAAGTT+GGG | 0.441766 | 8.4:-66434311 | None:intergenic |
AAAGTCCCAACTTGGATTGA+TGG | 0.441839 | 8.4:+66434306 | MS.gene056792:CDS |
ACAAGATGCTGGATTAAACT+TGG | 0.448478 | 8.4:+66435035 | MS.gene056792:CDS |
GTTGGTGTCGGTGCAAGATT+CGG | 0.451181 | 8.4:+66434348 | MS.gene056792:CDS |
GTACAGCATAACCAAGAAAC+AGG | 0.452241 | 8.4:-66435648 | None:intergenic |
CTCATTATAAATTATCGTAC+AGG | 0.453906 | 8.4:+66434699 | MS.gene056792:CDS |
ATCTTCACATATGTTTGTGC+AGG | 0.456906 | 8.4:-66435960 | None:intergenic |
GCAATGACTGCTTATGGTCT+AGG | 0.461735 | 8.4:+66437420 | MS.gene056792:CDS |
GTTATGCTTCCACAAGATGC+TGG | 0.462553 | 8.4:+66435024 | MS.gene056792:CDS |
ATACTCTCCACTTCGTCCAT+TGG | 0.465650 | 8.4:+66435200 | MS.gene056792:CDS |
TAAGGGTCTACAAACTTGTC+TGG | 0.469680 | 8.4:+66435814 | MS.gene056792:intron |
GTTAGGTCAAAGTCCCAACT+TGG | 0.470294 | 8.4:+66434298 | MS.gene056792:intron |
CTGGTTTCTTGAAGTTCTGG+TGG | 0.471891 | 8.4:+66435685 | MS.gene056792:CDS |
TTTCTCTGTACAGGTAGCTC+GGG | 0.478408 | 8.4:+66436734 | MS.gene056792:intron |
CCACTATCATCACGCTCTCA+TGG | 0.480266 | 8.4:-66436521 | None:intergenic |
GTAACAGCAAGTGTCAGATA+TGG | 0.481241 | 8.4:-66436002 | None:intergenic |
TATACTTACCAAGTGTAAAT+GGG | 0.486632 | 8.4:-66437805 | None:intergenic |
TCCACACCATCAATCCAAGT+TGG | 0.493462 | 8.4:-66434312 | None:intergenic |
GTGCACCAAAATGATCTCAT+TGG | 0.493592 | 8.4:-66434613 | None:intergenic |
CTATATAGAGCAAAGCTGGC+TGG | 0.507003 | 8.4:-66437781 | None:intergenic |
ACGATAATTTATAATGAGAA+TGG | 0.509940 | 8.4:-66434694 | None:intergenic |
AAAGTTGTTGTAGTTTCAGA+TGG | 0.512418 | 8.4:+66435928 | MS.gene056792:intron |
AATGAGAATGGCTGAAGCAC+CGG | 0.516902 | 8.4:-66434682 | None:intergenic |
GTCTGGCGGCTCTATTATCA+TGG | 0.517009 | 8.4:+66435831 | MS.gene056792:CDS |
ACACCCATAAGATGTCATAT+AGG | 0.520311 | 8.4:-66436479 | None:intergenic |
CCATGAGAGCGTGATGATAG+TGG | 0.524478 | 8.4:+66436521 | MS.gene056792:CDS |
GATGTTGTTCCAACAAGGCC+TGG | 0.526026 | 8.4:+66433613 | MS.gene056792:CDS |
GCAAAGAAGAACCTCCGAGC+TGG | 0.526351 | 8.4:+66437384 | MS.gene056792:CDS |
GGGACTATATAGAGCAAAGC+TGG | 0.526557 | 8.4:-66437785 | None:intergenic |
AAGTTTAATCCAGCATCTTG+TGG | 0.531321 | 8.4:-66435033 | None:intergenic |
GTCGCTTTAAACTTGATGGA+TGG | 0.538119 | 8.4:+66437752 | MS.gene056792:CDS |
GAAAATGCTACTACAAGTCC+CGG | 0.543526 | 8.4:-66436861 | None:intergenic |
AAGTGGAGAGTATAACTGTA+TGG | 0.543946 | 8.4:-66435190 | None:intergenic |
CAAGCATCATATGCATGGAT+TGG | 0.544368 | 8.4:+66436068 | MS.gene056792:CDS |
CGTGGTAACTTGAGAAGCAT+GGG | 0.546674 | 8.4:-66436783 | None:intergenic |
CACTGCAAATACTATGCAGA+AGG | 0.550804 | 8.4:-66436027 | None:intergenic |
AACGACAAGCATCATATGCA+TGG | 0.564749 | 8.4:+66436063 | MS.gene056792:CDS |
ACGTGGTAACTTGAGAAGCA+TGG | 0.564772 | 8.4:-66436784 | None:intergenic |
TTCGGGGACATAATCTTACC+GGG | 0.571328 | 8.4:+66436843 | MS.gene056792:CDS |
TGCAAGATTCGGTCCTACGT+TGG | 0.574301 | 8.4:+66434359 | MS.gene056792:CDS |
GCAAATATAGCTGATGAAGC+CGG | 0.576888 | 8.4:+66434663 | MS.gene056792:CDS |
CCACGTTTGTTTGATCCTTG+GGG | 0.578234 | 8.4:+66436801 | MS.gene056792:CDS |
CAATCATACTAGAGTTGTCA+TGG | 0.579681 | 8.4:+66434401 | MS.gene056792:CDS |
GCAGAAAGTGTTGGTTCTCG+TGG | 0.579848 | 8.4:+66435575 | MS.gene056792:CDS |
CCCAACTTGGATTGATGGTG+TGG | 0.588257 | 8.4:+66434311 | MS.gene056792:CDS |
TGTTGGTTCTCGTGGTTACG+TGG | 0.588787 | 8.4:+66435583 | MS.gene056792:CDS |
TATATAGTCCCATTTACACT+TGG | 0.589134 | 8.4:+66437797 | MS.gene056792:CDS |
GGACAAGAGGAGAACCAGAA+AGG | 0.592548 | 8.4:+66438659 | MS.gene056792:CDS |
CTTCTGCATAGTATTTGCAG+TGG | 0.594852 | 8.4:+66436028 | MS.gene056792:CDS |
TCCGAGCTGGATACTTCGTG+TGG | 0.595477 | 8.4:+66437397 | MS.gene056792:CDS |
AATCTGCTGAAGATCAATGT+TGG | 0.596723 | 8.4:-66438720 | None:intergenic |
CGTTTGTTTGATCCTTGGGG+TGG | 0.597198 | 8.4:+66436804 | MS.gene056792:CDS |
TTGTCATTGGGAAAGAAGAG+AGG | 0.601284 | 8.4:+66438619 | MS.gene056792:CDS |
TCTTGTGGAAGCATAACAGC+AGG | 0.606664 | 8.4:-66435018 | None:intergenic |
TTACAGCATCATTGGTTTCG+GGG | 0.610146 | 8.4:+66436827 | MS.gene056792:CDS |
GGGTGTTCGTCTCTAAATGG+TGG | 0.611855 | 8.4:+66436496 | MS.gene056792:CDS |
TGTTCGCATACCAAATCTCA+AGG | 0.612517 | 8.4:+66436231 | MS.gene056792:CDS |
AGTATTTGCAGTGGTTTGGG+CGG | 0.612976 | 8.4:+66436037 | MS.gene056792:CDS |
AGCAAGTGTCAGATATGGAA+CGG | 0.613995 | 8.4:-66435997 | None:intergenic |
GAATATGTTGCAGAAAGTGT+TGG | 0.615196 | 8.4:+66435566 | MS.gene056792:CDS |
ACATCAACCAATGGACGAAG+TGG | 0.617248 | 8.4:-66435207 | None:intergenic |
TATGGAACGGCTCCAAAGAA+CGG | 0.619684 | 8.4:-66435984 | None:intergenic |
AAAATGTAGTTTCACAACCA+AGG | 0.628218 | 8.4:+66434641 | MS.gene056792:CDS |
ATGATGATGTTGTTCCAACA+AGG | 0.629797 | 8.4:+66433608 | MS.gene056792:CDS |
TTCTCTGTACAGGTAGCTCG+GGG | 0.629906 | 8.4:+66436735 | MS.gene056792:intron |
AACGCTGAATATGTTGGTGT+CGG | 0.629918 | 8.4:+66434336 | MS.gene056792:CDS |
CACATACAAAATAACTCCAT+AGG | 0.631134 | 8.4:+66435063 | MS.gene056792:CDS |
GGTGATAAGAGTGGAGAAGA+CGG | 0.633523 | 8.4:+66436756 | MS.gene056792:CDS |
ACTTCTGCAACATCAACCAA+TGG | 0.636639 | 8.4:-66435216 | None:intergenic |
CCCACACGAAGTATCCAGCT+CGG | 0.639630 | 8.4:-66437398 | None:intergenic |
TTAAACTTGATGGATGGACA+TGG | 0.640581 | 8.4:+66437758 | MS.gene056792:CDS |
GTAGCTCGGGGTGATAAGAG+TGG | 0.642633 | 8.4:+66436747 | MS.gene056792:CDS |
TTAAAGCGACATATGTGATG+AGG | 0.646719 | 8.4:-66437739 | None:intergenic |
GTGGAAAACGCTGAATATGT+TGG | 0.652967 | 8.4:+66434330 | MS.gene056792:CDS |
GGGTCTACAAACTTGTCTGG+CGG | 0.654727 | 8.4:+66435817 | MS.gene056792:intron |
CCGAGCTGGATACTTCGTGT+GGG | 0.658262 | 8.4:+66437398 | MS.gene056792:CDS |
ACAAAGTTATTCTCACAACC+AGG | 0.666217 | 8.4:-66433631 | None:intergenic |
ACTGCAAATACTATGCAGAA+GGG | 0.683125 | 8.4:-66436026 | None:intergenic |
CCCCAAGGATCAAACAAACG+TGG | 0.683397 | 8.4:-66436801 | None:intergenic |
GGCTTGCTACAACAATCAGG+AGG | 0.689982 | 8.4:-66434429 | None:intergenic |
ATGATGCTGTAACCACCCCA+AGG | 0.696121 | 8.4:-66436816 | None:intergenic |
ACACGAAGTATCCAGCTCGG+AGG | 0.740591 | 8.4:-66437395 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATGAAGAATAAAAAATT+TGG | - | chr8.4:66433664-66433683 | None:intergenic | 10.0% |
!! | TTCAACAAAAATAAAAATAA+GGG | - | chr8.4:66436630-66436649 | None:intergenic | 10.0% |
!!! | AAAAATCATTTTTTTAATTG+AGG | + | chr8.4:66433789-66433808 | MS.gene056792:intron | 10.0% |
!!! | AATTCTTTTATAATTGTTTT+TGG | + | chr8.4:66433841-66433860 | MS.gene056792:intron | 10.0% |
!!! | ATAAAATTATTCATCATTTT+TGG | - | chr8.4:66434835-66434854 | None:intergenic | 10.0% |
!!! | TGATATATAAATTACTTTTA+TGG | + | chr8.4:66435525-66435544 | MS.gene056792:intron | 10.0% |
!! | AAAACTCAATACTAATTATA+AGG | - | chr8.4:66436716-66436735 | None:intergenic | 15.0% |
!! | CTTCAACAAAAATAAAAATA+AGG | - | chr8.4:66436631-66436650 | None:intergenic | 15.0% |
!! | TCAACAAAAATAAAAATAAG+GGG | - | chr8.4:66436629-66436648 | None:intergenic | 15.0% |
!!! | ATATTATAAGCTATTTCAAT+AGG | + | chr8.4:66437162-66437181 | MS.gene056792:intron | 15.0% |
!!! | ATGTTTTTTTTATGATAAAG+AGG | + | chr8.4:66436951-66436970 | MS.gene056792:intron | 15.0% |
!!! | TGAATATTTAATTTATGCTA+TGG | + | chr8.4:66434902-66434921 | MS.gene056792:intron | 15.0% |
!!! | TTTTATTTTTGTTGAAGAAA+CGG | + | chr8.4:66436634-66436653 | MS.gene056792:intron | 15.0% |
!! | AAAAAAACATAAGTAACACA+AGG | - | chr8.4:66436941-66436960 | None:intergenic | 20.0% |
!! | AAAATGTTACTAAAAGTCTA+GGG | - | chr8.4:66436155-66436174 | None:intergenic | 20.0% |
!! | ACGATAATTTATAATGAGAA+TGG | - | chr8.4:66434697-66434716 | None:intergenic | 20.0% |
!! | ATGAACATACAAATATTAGA+GGG | - | chr8.4:66435788-66435807 | None:intergenic | 20.0% |
!! | CTATTCTTCAATGTATTATT+TGG | + | chr8.4:66437875-66437894 | MS.gene056792:intron | 20.0% |
!! | CTCATTTATTACAAAATAAC+CGG | + | chr8.4:66438091-66438110 | MS.gene056792:intron | 20.0% |
!! | GCATTTATAAACAGTTAAAT+CGG | + | chr8.4:66436341-66436360 | MS.gene056792:intron | 20.0% |
!! | TAAATATTCAACAGATTGAT+TGG | - | chr8.4:66434892-66434911 | None:intergenic | 20.0% |
!! | TAAGTTCTTAATTGCATATA+TGG | + | chr8.4:66438337-66438356 | MS.gene056792:intron | 20.0% |
!! | TATGAACATACAAATATTAG+AGG | - | chr8.4:66435789-66435808 | None:intergenic | 20.0% |
!! | TCAATTTGGATAGAAATAAT+AGG | - | chr8.4:66435904-66435923 | None:intergenic | 20.0% |
!! | TTAATTGAGGAAAGAAAAAT+TGG | + | chr8.4:66433802-66433821 | MS.gene056792:intron | 20.0% |
!! | TTTCAAATTTATGAGTAAGA+TGG | - | chr8.4:66437832-66437851 | None:intergenic | 20.0% |
!!! | ACCAATTTACAGTTTTTTTT+CGG | - | chr8.4:66438445-66438464 | None:intergenic | 20.0% |
!!! | AGAAAGTGTTTTTTATGTTA+AGG | + | chr8.4:66435461-66435480 | MS.gene056792:intron | 20.0% |
!!! | ATCATATCATTTTCAATAAC+AGG | - | chr8.4:66434110-66434129 | None:intergenic | 20.0% |
!!! | TCAATTTTTCTTGTAGTTAT+TGG | + | chr8.4:66437674-66437693 | MS.gene056792:intron | 20.0% |
!!! | TTATTTTGACATTAAAACGT+AGG | - | chr8.4:66437199-66437218 | None:intergenic | 20.0% |
!!! | TTGAACTTTCTGTTTTTTAA+GGG | + | chr8.4:66433872-66433891 | MS.gene056792:intron | 20.0% |
!!! | TTTGAACTTTCTGTTTTTTA+AGG | + | chr8.4:66433871-66433890 | MS.gene056792:intron | 20.0% |
! | AAACGGAGATTATAGTAAAA+TGG | + | chr8.4:66436651-66436670 | MS.gene056792:intron | 25.0% |
! | AACGGAGATTATAGTAAAAT+GGG | + | chr8.4:66436652-66436671 | MS.gene056792:intron | 25.0% |
! | AAGAAAAATTGAAGTGATGA+CGG | - | chr8.4:66437666-66437685 | None:intergenic | 25.0% |
! | AAGATAAAGTGAAGAAAGAA+TGG | + | chr8.4:66435377-66435396 | MS.gene056792:intron | 25.0% |
! | AATCAATTAACCAACATTGA+TGG | + | chr8.4:66438710-66438729 | MS.gene056792:CDS | 25.0% |
! | AATGAAACTGATGTTGATAT+TGG | + | chr8.4:66434991-66435010 | MS.gene056792:CDS | 25.0% |
! | AATTCAACGAATAACACATA+TGG | - | chr8.4:66437705-66437724 | None:intergenic | 25.0% |
! | ACCAAGATAGATTATAGAAA+CGG | - | chr8.4:66437106-66437125 | None:intergenic | 25.0% |
! | ACCGAAAAAAAACTGTAAAT+TGG | + | chr8.4:66438441-66438460 | MS.gene056792:intron | 25.0% |
! | AGTCAAAATACCTTATTCTT+AGG | - | chr8.4:66434453-66434472 | None:intergenic | 25.0% |
! | ATCTCCATGTAAAAAAGAAT+AGG | + | chr8.4:66437265-66437284 | MS.gene056792:intron | 25.0% |
! | ATTATTTGGTTGTGTTCTAT+TGG | + | chr8.4:66437889-66437908 | MS.gene056792:intron | 25.0% |
! | ATTCAACGAATAACACATAT+GGG | - | chr8.4:66437704-66437723 | None:intergenic | 25.0% |
! | ATTGTGCTGTATAATGTTAA+CGG | + | chr8.4:66437308-66437327 | MS.gene056792:intron | 25.0% |
! | CAAAAATAAAAATAAGGGGA+AGG | - | chr8.4:66436625-66436644 | None:intergenic | 25.0% |
! | CTCATTATAAATTATCGTAC+AGG | + | chr8.4:66434699-66434718 | MS.gene056792:CDS | 25.0% |
! | GAAAATGTTACTAAAAGTCT+AGG | - | chr8.4:66436156-66436175 | None:intergenic | 25.0% |
! | GATCATACAATATATGTATG+TGG | + | chr8.4:66436904-66436923 | MS.gene056792:intron | 25.0% |
! | GTATGATACACATATGATTT+GGG | + | chr8.4:66437442-66437461 | MS.gene056792:intron | 25.0% |
! | TATGATACACATATGATTTG+GGG | + | chr8.4:66437443-66437462 | MS.gene056792:intron | 25.0% |
! | TGTAAAAAAGAATAGGTACA+TGG | + | chr8.4:66437272-66437291 | MS.gene056792:intron | 25.0% |
! | TGTACAAATTAATGTCATTC+TGG | + | chr8.4:66435666-66435685 | MS.gene056792:CDS | 25.0% |
! | TGTATGTTCATATGCTTTAA+GGG | + | chr8.4:66435797-66435816 | MS.gene056792:intron | 25.0% |
! | TTAGAAAATAGAGTGTAGTT+AGG | + | chr8.4:66434150-66434169 | MS.gene056792:intron | 25.0% |
! | TTCTTAATTGCATATATGGA+TGG | + | chr8.4:66438341-66438360 | MS.gene056792:intron | 25.0% |
! | TTGTATGTTCATATGCTTTA+AGG | + | chr8.4:66435796-66435815 | MS.gene056792:intron | 25.0% |
! | TTTCCTATATGACATCTTAT+GGG | + | chr8.4:66436476-66436495 | MS.gene056792:CDS | 25.0% |
! | TTTGGTAGAACTTATGAAAA+TGG | + | chr8.4:66433940-66433959 | MS.gene056792:intron | 25.0% |
! | TTTGTCAATTAGTGATCTTT+AGG | + | chr8.4:66434799-66434818 | MS.gene056792:intron | 25.0% |
!! | AAGTAAACTTTTATGCAATG+TGG | + | chr8.4:66434253-66434272 | MS.gene056792:intron | 25.0% |
!! | ATTCGTTGAATTTTATATGC+AGG | + | chr8.4:66437713-66437732 | MS.gene056792:intron | 25.0% |
!! | TATCTTTTAGTGTGAAAGAT+TGG | - | chr8.4:66435363-66435382 | None:intergenic | 25.0% |
!! | TTATCTACAATGCTTGATTT+TGG | + | chr8.4:66436579-66436598 | MS.gene056792:intron | 25.0% |
!! | TTTGAAAGTGTAAACACATA+TGG | + | chr8.4:66437845-66437864 | MS.gene056792:intron | 25.0% |
!!! | AGTTGTTTTTACAATTGAAG+AGG | + | chr8.4:66437045-66437064 | MS.gene056792:intron | 25.0% |
!!! | TAAATTACTTTTATGGTTGC+AGG | + | chr8.4:66435532-66435551 | MS.gene056792:intron | 25.0% |
!!! | TGATTTTAGTTTCCAATAGA+TGG | + | chr8.4:66438393-66438412 | MS.gene056792:intron | 25.0% |
!!! | TGTACCTATTCTTTTTTACA+TGG | - | chr8.4:66437272-66437291 | None:intergenic | 25.0% |
!!! | TTACTTGTTTTTGATACTCT+TGG | + | chr8.4:66436292-66436311 | MS.gene056792:intron | 25.0% |
!!! | TTTATGTGTGATTTTGATCT+TGG | + | chr8.4:66433706-66433725 | MS.gene056792:intron | 25.0% |
AAAATGTAGTTTCACAACCA+AGG | + | chr8.4:66434641-66434660 | MS.gene056792:CDS | 30.0% | |
AAAGTTGTTGTAGTTTCAGA+TGG | + | chr8.4:66435928-66435947 | MS.gene056792:intron | 30.0% | |
ACATAAAAAACACTTTCTCC+CGG | - | chr8.4:66435459-66435478 | None:intergenic | 30.0% | |
AGATAGAGACAAACAATAAC+CGG | + | chr8.4:66435437-66435456 | MS.gene056792:intron | 30.0% | |
ATACTCTTGGATTTAAGAAC+AGG | + | chr8.4:66436305-66436324 | MS.gene056792:intron | 30.0% | |
ATACTTCCGAACTAACTATA+GGG | + | chr8.4:66438244-66438263 | MS.gene056792:intron | 30.0% | |
ATATTGCTTGACTATCATTC+AGG | + | chr8.4:66436177-66436196 | MS.gene056792:intron | 30.0% | |
ATCTACAACAACAAACTTCA+AGG | - | chr8.4:66435869-66435888 | None:intergenic | 30.0% | |
CACATACAAAATAACTCCAT+AGG | + | chr8.4:66435063-66435082 | MS.gene056792:CDS | 30.0% | |
CATAAAATACATCTCCACAT+AGG | + | chr8.4:66437242-66437261 | MS.gene056792:intron | 30.0% | |
CTTCACGACAAAATTAGAAA+CGG | - | chr8.4:66437594-66437613 | None:intergenic | 30.0% | |
CTTTCCTATATGACATCTTA+TGG | + | chr8.4:66436475-66436494 | MS.gene056792:CDS | 30.0% | |
GAAAGAAAAATTGGACTGTT+TGG | + | chr8.4:66433811-66433830 | MS.gene056792:intron | 30.0% | |
GGTATGATACACATATGATT+TGG | + | chr8.4:66437441-66437460 | MS.gene056792:intron | 30.0% | |
GTCATGTAAATCATAATTGC+AGG | + | chr8.4:66438589-66438608 | MS.gene056792:intron | 30.0% | |
GTTGCATTTGGTAAATTCTA+TGG | - | chr8.4:66434487-66434506 | None:intergenic | 30.0% | |
TAAAAATCCACGTAGATGTT+TGG | + | chr8.4:66438141-66438160 | MS.gene056792:intron | 30.0% | |
TAGAGACGGAAAAATAAAAG+TGG | - | chr8.4:66437639-66437658 | None:intergenic | 30.0% | |
TATACTTCCGAACTAACTAT+AGG | + | chr8.4:66438243-66438262 | MS.gene056792:intron | 30.0% | |
TATACTTCTTTCTCTGTATC+AGG | + | chr8.4:66436428-66436447 | MS.gene056792:intron | 30.0% | |
TATTGCTTGACTATCATTCA+GGG | + | chr8.4:66436178-66436197 | MS.gene056792:intron | 30.0% | |
TCAAATCATACCTTGAGATT+TGG | - | chr8.4:66436244-66436263 | None:intergenic | 30.0% | |
TCTACATTATTGCCATCTAT+TGG | - | chr8.4:66438408-66438427 | None:intergenic | 30.0% | |
TCTGCAAATGTATTGTCTTA+TGG | + | chr8.4:66434217-66434236 | MS.gene056792:intron | 30.0% | |
TGACATTAAAACGTAGGTAA+TGG | - | chr8.4:66437193-66437212 | None:intergenic | 30.0% | |
TGCTAACAAAATGTTCTGTT+AGG | + | chr8.4:66434281-66434300 | MS.gene056792:intron | 30.0% | |
TGGTTAACTTCTTCAATATG+AGG | - | chr8.4:66438691-66438710 | None:intergenic | 30.0% | |
TGTACATGCAATAGAACAAA+GGG | - | chr8.4:66435152-66435171 | None:intergenic | 30.0% | |
TTATGATAAAGAGGACGTTT+GGG | + | chr8.4:66436960-66436979 | MS.gene056792:intron | 30.0% | |
TTGTACATGCAATAGAACAA+AGG | - | chr8.4:66435153-66435172 | None:intergenic | 30.0% | |
TTGTGAGAATAACTTTGTTC+TGG | + | chr8.4:66433636-66433655 | MS.gene056792:CDS | 30.0% | |
TTTATGATAAAGAGGACGTT+TGG | + | chr8.4:66436959-66436978 | MS.gene056792:intron | 30.0% | |
! | AGATGTATTTTATGGACGTT+TGG | - | chr8.4:66437236-66437255 | None:intergenic | 30.0% |
! | ATGTTTCTAATCTTCACTTG+TGG | + | chr8.4:66437506-66437525 | MS.gene056792:intron | 30.0% |
! | CCAATAAGAAGCACATAAAA+TGG | - | chr8.4:66435268-66435287 | None:intergenic | 30.0% |
! | CCATTTTATGTGCTTCTTAT+TGG | + | chr8.4:66435265-66435284 | MS.gene056792:CDS | 30.0% |
! | CTATGTGGAGATGTATTTTA+TGG | - | chr8.4:66437244-66437263 | None:intergenic | 30.0% |
! | TAGTTAGCACAGCATTATTT+TGG | - | chr8.4:66438059-66438078 | None:intergenic | 30.0% |
! | TATTGAGTTTTTCTCTGTAC+AGG | + | chr8.4:66436725-66436744 | MS.gene056792:intron | 30.0% |
! | TGAAGTGTTAGATGGAAAAT+TGG | + | chr8.4:66437609-66437628 | MS.gene056792:intron | 30.0% |
! | TTGTAGTAGCATTTTCACTA+AGG | + | chr8.4:66436868-66436887 | MS.gene056792:CDS | 30.0% |
! | TTGTGAAACTACATTTTCCT+CGG | - | chr8.4:66434638-66434657 | None:intergenic | 30.0% |
!! | AATATGATCGGTTCACATTT+TGG | + | chr8.4:66437957-66437976 | MS.gene056792:intron | 30.0% |
!! | ACTACTTTTACAGGTATGAT+TGG | + | chr8.4:66437358-66437377 | MS.gene056792:intron | 30.0% |
!! | ATATGTCGCTTTAAACTTGA+TGG | + | chr8.4:66437748-66437767 | MS.gene056792:CDS | 30.0% |
!! | ATTTTTAGAAAGCATGGAGA+AGG | - | chr8.4:66438128-66438147 | None:intergenic | 30.0% |
!! | CTATTGACAACTACTTTTAC+AGG | + | chr8.4:66437349-66437368 | MS.gene056792:intron | 30.0% |
!! | GTTTGTTGTTGTAGATTATG+AGG | + | chr8.4:66435873-66435892 | MS.gene056792:intron | 30.0% |
!! | TAAGTTCTTCTGAGACTATT+TGG | + | chr8.4:66433922-66433941 | MS.gene056792:intron | 30.0% |
!! | TTAGTGATCTTTAGGATCAT+AGG | + | chr8.4:66434807-66434826 | MS.gene056792:intron | 30.0% |
!! | TTTTCTTTTGATTCCAACGT+AGG | - | chr8.4:66434375-66434394 | None:intergenic | 30.0% |
!! | TTTTTAGAAAGCATGGAGAA+GGG | - | chr8.4:66438127-66438146 | None:intergenic | 30.0% |
AAGTTTAATCCAGCATCTTG+TGG | - | chr8.4:66435036-66435055 | None:intergenic | 35.0% | |
AATTGAGCATACATCACACA+AGG | - | chr8.4:66434073-66434092 | None:intergenic | 35.0% | |
ACAAAGTTATTCTCACAACC+AGG | - | chr8.4:66433634-66433653 | None:intergenic | 35.0% | |
ACAAGATGCTGGATTAAACT+TGG | + | chr8.4:66435035-66435054 | MS.gene056792:CDS | 35.0% | |
ACACCCATAAGATGTCATAT+AGG | - | chr8.4:66436482-66436501 | None:intergenic | 35.0% | |
ACTGCAAATACTATGCAGAA+GGG | - | chr8.4:66436029-66436048 | None:intergenic | 35.0% | |
AGAAAAATTGGACTGTTTGG+TGG | + | chr8.4:66433814-66433833 | MS.gene056792:intron | 35.0% | |
AGTAACACAAGGTGAATAGA+AGG | - | chr8.4:66436930-66436949 | None:intergenic | 35.0% | |
ATCTTCACATATGTTTGTGC+AGG | - | chr8.4:66435963-66435982 | None:intergenic | 35.0% | |
ATGTGAACCGATCATATTGA+TGG | - | chr8.4:66437955-66437974 | None:intergenic | 35.0% | |
ATTGCTATGTCATAGTCACA+TGG | - | chr8.4:66438520-66438539 | None:intergenic | 35.0% | |
CAATCATACTAGAGTTGTCA+TGG | + | chr8.4:66434401-66434420 | MS.gene056792:CDS | 35.0% | |
CAATTCAGTAACGTTGCATT+TGG | - | chr8.4:66434499-66434518 | None:intergenic | 35.0% | |
CATAGTATTTGCAGTGGTTT+GGG | + | chr8.4:66436034-66436053 | MS.gene056792:CDS | 35.0% | |
CATGACAACTCTAGTATGAT+TGG | - | chr8.4:66434403-66434422 | None:intergenic | 35.0% | |
GAAAAATTGGACTGTTTGGT+GGG | + | chr8.4:66433815-66433834 | MS.gene056792:intron | 35.0% | |
GAGAAAGTTGAACATACCTA+TGG | - | chr8.4:66435082-66435101 | None:intergenic | 35.0% | |
GAGACAATAAAGAGTTGTGT+TGG | + | chr8.4:66437984-66438003 | MS.gene056792:intron | 35.0% | |
GATAGAGACAAACAATAACC+GGG | + | chr8.4:66435438-66435457 | MS.gene056792:intron | 35.0% | |
GATTGGCATGAAAAGAAACT+AGG | - | chr8.4:66435346-66435365 | None:intergenic | 35.0% | |
GCCGTTTCTATAATCTATCT+TGG | + | chr8.4:66437102-66437121 | MS.gene056792:intron | 35.0% | |
GGTTCAACCATCAATATGAT+CGG | + | chr8.4:66437945-66437964 | MS.gene056792:intron | 35.0% | |
GTATAACTGTATGGACACTT+AGG | - | chr8.4:66435184-66435203 | None:intergenic | 35.0% | |
TAAATGAAGAGATGATGCCT+CGG | - | chr8.4:66436275-66436294 | None:intergenic | 35.0% | |
TACTTCCGAACTAACTATAG+GGG | + | chr8.4:66438245-66438264 | MS.gene056792:intron | 35.0% | |
TAGATGGCAATAATGTAGAC+TGG | + | chr8.4:66438409-66438428 | MS.gene056792:intron | 35.0% | |
TAGATTATAGAAACGGCTCA+TGG | - | chr8.4:66437099-66437118 | None:intergenic | 35.0% | |
TAGTAAAATGGGAACACAAG+TGG | + | chr8.4:66436663-66436682 | MS.gene056792:intron | 35.0% | |
TATACTTCCAAACATCTACG+TGG | - | chr8.4:66438151-66438170 | None:intergenic | 35.0% | |
TATGTGAAGATACCGTTCTT+TGG | + | chr8.4:66435972-66435991 | MS.gene056792:CDS | 35.0% | |
TTAAAGCGACATATGTGATG+AGG | - | chr8.4:66437742-66437761 | None:intergenic | 35.0% | |
TTCATCAGCTATATTTGCCT+TGG | - | chr8.4:66434661-66434680 | None:intergenic | 35.0% | |
TTCTTTCTCTGTATCAGGTT+GGG | + | chr8.4:66436433-66436452 | MS.gene056792:intron | 35.0% | |
TTGCTATGTCATAGTCACAT+GGG | - | chr8.4:66438519-66438538 | None:intergenic | 35.0% | |
TTGTAGCAAGCCTAAGAATA+AGG | + | chr8.4:66434440-66434459 | MS.gene056792:CDS | 35.0% | |
TTTCTAATCTTCACTTGTGG+AGG | + | chr8.4:66437509-66437528 | MS.gene056792:intron | 35.0% | |
TTTGCTTGCTTAGAAACTGT+TGG | + | chr8.4:66433737-66433756 | MS.gene056792:intron | 35.0% | |
! | AAGTGGAGAGTATAACTGTA+TGG | - | chr8.4:66435193-66435212 | None:intergenic | 35.0% |
! | AGTAGCATTTTCACTAAGGT+TGG | + | chr8.4:66436872-66436891 | MS.gene056792:intron | 35.0% |
! | ATAGCTTTGCTGGATACTAA+TGG | + | chr8.4:66436380-66436399 | MS.gene056792:intron | 35.0% |
! | ATGATGATGTTGTTCCAACA+AGG | + | chr8.4:66433608-66433627 | MS.gene056792:CDS | 35.0% |
! | CAACAACTTTGCTGTCAATT+TGG | - | chr8.4:66435918-66435937 | None:intergenic | 35.0% |
! | CCAACCTGAATAAATGCTTT+TGG | + | chr8.4:66436690-66436709 | MS.gene056792:intron | 35.0% |
! | CTCAAGATTTTATGGACAAG+AGG | + | chr8.4:66438646-66438665 | MS.gene056792:CDS | 35.0% |
! | CTTTTACAGGTATGATTGGT+TGG | + | chr8.4:66437362-66437381 | MS.gene056792:intron | 35.0% |
! | GAAAGTGTAAACACATATGG+TGG | + | chr8.4:66437848-66437867 | MS.gene056792:intron | 35.0% |
! | GAATATGTTGCAGAAAGTGT+TGG | + | chr8.4:66435566-66435585 | MS.gene056792:CDS | 35.0% |
! | GTAGCATATGTGTTTCTGTT+TGG | + | chr8.4:66433550-66433569 | MS.gene056792:CDS | 35.0% |
! | GTTTGGAAGTATACTTGACA+GGG | + | chr8.4:66438158-66438177 | MS.gene056792:intron | 35.0% |
! | TGAGCAAGAGAAGCTTTTAA+AGG | + | chr8.4:66435317-66435336 | MS.gene056792:CDS | 35.0% |
! | TGTTTGGAAGTATACTTGAC+AGG | + | chr8.4:66438157-66438176 | MS.gene056792:intron | 35.0% |
! | TTAAACTTGATGGATGGACA+TGG | + | chr8.4:66437758-66437777 | MS.gene056792:CDS | 35.0% |
! | TTTGTCCAGAAGTATACTTC+TGG | + | chr8.4:66438193-66438212 | MS.gene056792:intron | 35.0% |
! | TTTTACATGGAGATCCTATG+TGG | - | chr8.4:66437259-66437278 | None:intergenic | 35.0% |
! | TTTTTGCATTGGAGGAATAG+AGG | + | chr8.4:66435712-66435731 | MS.gene056792:CDS | 35.0% |
!! | AAGGCCAAAAGCATTTATTC+AGG | - | chr8.4:66436697-66436716 | None:intergenic | 35.0% |
!! | ACGTGGATTTTTAGAAAGCA+TGG | - | chr8.4:66438134-66438153 | None:intergenic | 35.0% |
!! | ACTTTTCAAGATGGTTTGTG+AGG | + | chr8.4:66434966-66434985 | MS.gene056792:CDS | 35.0% |
!! | ATTCTGGTTTCTTGAAGTTC+TGG | + | chr8.4:66435682-66435701 | MS.gene056792:CDS | 35.0% |
!! | CCAAAAGCATTTATTCAGGT+TGG | - | chr8.4:66436693-66436712 | None:intergenic | 35.0% |
!! | CTGTACAGAACTTTTCAAGA+TGG | + | chr8.4:66434957-66434976 | MS.gene056792:intron | 35.0% |
!! | TTTTAGAAAGCATGGAGAAG+GGG | - | chr8.4:66438126-66438145 | None:intergenic | 35.0% |
!! | TTTTGTCGTGAAGTGTTAGA+TGG | + | chr8.4:66437601-66437620 | MS.gene056792:intron | 35.0% |
!!! | AGAAGTGTTTTTGTGGCTTA+TGG | + | chr8.4:66435233-66435252 | MS.gene056792:CDS | 35.0% |
!!! | ATGTTGCAGAAGTGTTTTTG+TGG | + | chr8.4:66435226-66435245 | MS.gene056792:CDS | 35.0% |
!!! | CAGTTTTTTTTCGGTACTCA+AGG | - | chr8.4:66438436-66438455 | None:intergenic | 35.0% |
!!! | GTTTTAAGAGATAGCTTTGC+TGG | + | chr8.4:66436370-66436389 | MS.gene056792:intron | 35.0% |
AAAGTCCCAACTTGGATTGA+TGG | + | chr8.4:66434306-66434325 | MS.gene056792:CDS | 40.0% | |
AAATGAAGAGATGATGCCTC+GGG | - | chr8.4:66436274-66436293 | None:intergenic | 40.0% | |
AACGACAAGCATCATATGCA+TGG | + | chr8.4:66436063-66436082 | MS.gene056792:CDS | 40.0% | |
AACGCTGAATATGTTGGTGT+CGG | + | chr8.4:66434336-66434355 | MS.gene056792:CDS | 40.0% | |
ACCACGTTTGTTTGATCCTT+GGG | + | chr8.4:66436800-66436819 | MS.gene056792:CDS | 40.0% | |
ACTTCTGCAACATCAACCAA+TGG | - | chr8.4:66435219-66435238 | None:intergenic | 40.0% | |
AGCAAGTGTCAGATATGGAA+CGG | - | chr8.4:66436000-66436019 | None:intergenic | 40.0% | |
ATATGAGGACAATGCCTTTC+TGG | - | chr8.4:66438676-66438695 | None:intergenic | 40.0% | |
ATGGGATGATAACACAACGA+CGG | - | chr8.4:66438501-66438520 | None:intergenic | 40.0% | |
CAAGCATCATATGCATGGAT+TGG | + | chr8.4:66436068-66436087 | MS.gene056792:CDS | 40.0% | |
CACTGCAAATACTATGCAGA+AGG | - | chr8.4:66436030-66436049 | None:intergenic | 40.0% | |
CTTCTGCATAGTATTTGCAG+TGG | + | chr8.4:66436028-66436047 | MS.gene056792:CDS | 40.0% | |
CTTCTTTCTCTGTATCAGGT+TGG | + | chr8.4:66436432-66436451 | MS.gene056792:intron | 40.0% | |
CTTTGCTGGATACTAATGGA+TGG | + | chr8.4:66436384-66436403 | MS.gene056792:intron | 40.0% | |
GAAAATGCTACTACAAGTCC+CGG | - | chr8.4:66436864-66436883 | None:intergenic | 40.0% | |
GAATGGATGCAATAATCGCA+AGG | + | chr8.4:66435394-66435413 | MS.gene056792:intron | 40.0% | |
GAGAGCTTATGTCGTGTTTA+TGG | - | chr8.4:66437077-66437096 | None:intergenic | 40.0% | |
GCAAATATAGCTGATGAAGC+CGG | + | chr8.4:66434663-66434682 | MS.gene056792:CDS | 40.0% | |
GCATAGTATTTGCAGTGGTT+TGG | + | chr8.4:66436033-66436052 | MS.gene056792:CDS | 40.0% | |
GTAACAGCAAGTGTCAGATA+TGG | - | chr8.4:66436005-66436024 | None:intergenic | 40.0% | |
GTACAGCATAACCAAGAAAC+AGG | - | chr8.4:66435651-66435670 | None:intergenic | 40.0% | |
GTGCACCAAAATGATCTCAT+TGG | - | chr8.4:66434616-66434635 | None:intergenic | 40.0% | |
GTGGAAAACGCTGAATATGT+TGG | + | chr8.4:66434330-66434349 | MS.gene056792:CDS | 40.0% | |
GTTGGAACAGTCAAGAGATT+TGG | + | chr8.4:66433755-66433774 | MS.gene056792:intron | 40.0% | |
TAAGGGTCTACAAACTTGTC+TGG | + | chr8.4:66435814-66435833 | MS.gene056792:intron | 40.0% | |
TACCACGTTTGTTTGATCCT+TGG | + | chr8.4:66436799-66436818 | MS.gene056792:CDS | 40.0% | |
TATGGGTGTTCGTCTCTAAA+TGG | + | chr8.4:66436493-66436512 | MS.gene056792:CDS | 40.0% | |
TGTTCGCATACCAAATCTCA+AGG | + | chr8.4:66436231-66436250 | MS.gene056792:CDS | 40.0% | |
TTGTCATTGGGAAAGAAGAG+AGG | + | chr8.4:66438619-66438638 | MS.gene056792:CDS | 40.0% | |
TTTCGGGGACATAATCTTAC+CGG | + | chr8.4:66436842-66436861 | MS.gene056792:CDS | 40.0% | |
! | GAGGCGATCTCAAGATTTTA+TGG | + | chr8.4:66438638-66438657 | MS.gene056792:CDS | 40.0% |
! | GCTCACCAATGAGATCATTT+TGG | + | chr8.4:66434608-66434627 | MS.gene056792:intron | 40.0% |
! | GTCGCTTTAAACTTGATGGA+TGG | + | chr8.4:66437752-66437771 | MS.gene056792:CDS | 40.0% |
! | TAAGAACAGGTGTTGTGCAT+GGG | + | chr8.4:66436318-66436337 | MS.gene056792:intron | 40.0% |
! | TCCAGAAGTATACTTCTGGA+GGG | + | chr8.4:66438197-66438216 | MS.gene056792:intron | 40.0% |
! | TTAAGAACAGGTGTTGTGCA+TGG | + | chr8.4:66436317-66436336 | MS.gene056792:intron | 40.0% |
! | TTTAGAAAGCATGGAGAAGG+GGG | - | chr8.4:66438125-66438144 | None:intergenic | 40.0% |
! | TTTTCTCTGTACAGGTAGCT+CGG | + | chr8.4:66436733-66436752 | MS.gene056792:intron | 40.0% |
! | TTTTTGTGGCTTATGGCTGT+TGG | + | chr8.4:66435240-66435259 | MS.gene056792:CDS | 40.0% |
!! | GGTTACAGCATCATTGGTTT+CGG | + | chr8.4:66436825-66436844 | MS.gene056792:CDS | 40.0% |
!! | GTGATGACGGAAATTAGAGA+CGG | - | chr8.4:66437653-66437672 | None:intergenic | 40.0% |
!! | GTTACAGCATCATTGGTTTC+GGG | + | chr8.4:66436826-66436845 | MS.gene056792:CDS | 40.0% |
!! | GTTTCTGTTTGGTGTGTCTT+TGG | + | chr8.4:66433561-66433580 | MS.gene056792:CDS | 40.0% |
!! | TTACAGCATCATTGGTTTCG+GGG | + | chr8.4:66436827-66436846 | MS.gene056792:CDS | 40.0% |
!! | TTAGGCTTGCTACAACAATC+AGG | - | chr8.4:66434435-66434454 | None:intergenic | 40.0% |
!!! | CTGGTGGTTCTTTTTTGCAT+TGG | + | chr8.4:66435701-66435720 | MS.gene056792:CDS | 40.0% |
!!! | GCAGGCACTTTTTTGTCATT+GGG | + | chr8.4:66438607-66438626 | MS.gene056792:intron | 40.0% |
!!! | GTGGTTCTTTTTTGCATTGG+AGG | + | chr8.4:66435704-66435723 | MS.gene056792:CDS | 40.0% |
!!! | GTTTGGTGTGTCTTTGGTTT+TGG | + | chr8.4:66433567-66433586 | MS.gene056792:CDS | 40.0% |
!!! | TGCAGGCACTTTTTTGTCAT+TGG | + | chr8.4:66438606-66438625 | MS.gene056792:intron | 40.0% |
AATGAAGAGATGATGCCTCG+GGG | - | chr8.4:66436273-66436292 | None:intergenic | 45.0% | |
AATGAGAATGGCTGAAGCAC+CGG | - | chr8.4:66434685-66434704 | None:intergenic | 45.0% | |
ACATCAACCAATGGACGAAG+TGG | - | chr8.4:66435210-66435229 | None:intergenic | 45.0% | |
ACGTGGTAACTTGAGAAGCA+TGG | - | chr8.4:66436787-66436806 | None:intergenic | 45.0% | |
ATACTCTCCACTTCGTCCAT+TGG | + | chr8.4:66435200-66435219 | MS.gene056792:CDS | 45.0% | |
ATGATTTGAAAGTTCCCCCG+AGG | + | chr8.4:66436255-66436274 | MS.gene056792:intron | 45.0% | |
CCACACCATCAATCCAAGTT+GGG | - | chr8.4:66434314-66434333 | None:intergenic | 45.0% | |
CCACGTTTGTTTGATCCTTG+GGG | + | chr8.4:66436801-66436820 | MS.gene056792:CDS | 45.0% | |
CCATGCAGCGAGTTTATTTC+GGG | - | chr8.4:66438286-66438305 | None:intergenic | 45.0% | |
CCCATCCCCTATAGTTAGTT+CGG | - | chr8.4:66438253-66438272 | None:intergenic | 45.0% | |
CCGAACTAACTATAGGGGAT+GGG | + | chr8.4:66438250-66438269 | MS.gene056792:intron | 45.0% | |
CCTTTGCACTGTTCATGCAA+AGG | - | chr8.4:66437927-66437946 | None:intergenic | 45.0% | |
CCTTTGCATGAACAGTGCAA+AGG | + | chr8.4:66437924-66437943 | MS.gene056792:intron | 45.0% | |
CTATATAGAGCAAAGCTGGC+TGG | - | chr8.4:66437784-66437803 | None:intergenic | 45.0% | |
GCAATGACTGCTTATGGTCT+AGG | + | chr8.4:66437420-66437439 | MS.gene056792:CDS | 45.0% | |
GCCATGCAGCGAGTTTATTT+CGG | - | chr8.4:66438287-66438306 | None:intergenic | 45.0% | |
GGGACTATATAGAGCAAAGC+TGG | - | chr8.4:66437788-66437807 | None:intergenic | 45.0% | |
GGTGATAAGAGTGGAGAAGA+CGG | + | chr8.4:66436756-66436775 | MS.gene056792:CDS | 45.0% | |
GTTAGGTCAAAGTCCCAACT+TGG | + | chr8.4:66434298-66434317 | MS.gene056792:intron | 45.0% | |
GTTATGCTTCCACAAGATGC+TGG | + | chr8.4:66435024-66435043 | MS.gene056792:CDS | 45.0% | |
TATGGAACGGCTCCAAAGAA+CGG | - | chr8.4:66435987-66436006 | None:intergenic | 45.0% | |
TCCACACCATCAATCCAAGT+TGG | - | chr8.4:66434315-66434334 | None:intergenic | 45.0% | |
TCCGAACTAACTATAGGGGA+TGG | + | chr8.4:66438249-66438268 | MS.gene056792:intron | 45.0% | |
TTCGGGGACATAATCTTACC+GGG | + | chr8.4:66436843-66436862 | MS.gene056792:CDS | 45.0% | |
TTGCTCAATAGCAGCTTCTC+TGG | - | chr8.4:66435304-66435323 | None:intergenic | 45.0% | |
TTTCTCTGTACAGGTAGCTC+GGG | + | chr8.4:66436734-66436753 | MS.gene056792:intron | 45.0% | |
! | AAGAACAGGTGTTGTGCATG+GGG | + | chr8.4:66436319-66436338 | MS.gene056792:intron | 45.0% |
! | AGTATTTGCAGTGGTTTGGG+CGG | + | chr8.4:66436037-66436056 | MS.gene056792:CDS | 45.0% |
! | CGTGGTAACTTGAGAAGCAT+GGG | - | chr8.4:66436786-66436805 | None:intergenic | 45.0% |
! | CTCTAGCTCATTCAACTCTC+AGG | - | chr8.4:66438309-66438328 | None:intergenic | 45.0% |
! | CTGGTTTCTTGAAGTTCTGG+TGG | + | chr8.4:66435685-66435704 | MS.gene056792:CDS | 45.0% |
! | GTCCAGAAGTATACTTCTGG+AGG | + | chr8.4:66438196-66438215 | MS.gene056792:intron | 45.0% |
! | GTGCTTCTTATTGGTCTGCT+TGG | + | chr8.4:66435274-66435293 | MS.gene056792:CDS | 45.0% |
! | TCTTGTGGAAGCATAACAGC+AGG | - | chr8.4:66435021-66435040 | None:intergenic | 45.0% |
! | TGTGCTTGCTTCCTGTTTCT+TGG | + | chr8.4:66435637-66435656 | MS.gene056792:CDS | 45.0% |
! | TTAGAAAGCATGGAGAAGGG+GGG | - | chr8.4:66438124-66438143 | None:intergenic | 45.0% |
!!! | TTTTTTTTTTAATGATTTTT+GGG | + | chr8.4:66434751-66434770 | MS.gene056792:intron | 5.0% |
!!! | TTTTTTTTTTTAATGATTTT+TGG | + | chr8.4:66434750-66434769 | MS.gene056792:intron | 5.0% |
ATGAAGAGATGATGCCTCGG+GGG | - | chr8.4:66436272-66436291 | None:intergenic | 50.0% | |
ATGATGCTGTAACCACCCCA+AGG | - | chr8.4:66436819-66436838 | None:intergenic | 50.0% | |
CCACTATCATCACGCTCTCA+TGG | - | chr8.4:66436524-66436543 | None:intergenic | 50.0% | |
CCCCAAGGATCAAACAAACG+TGG | - | chr8.4:66436804-66436823 | None:intergenic | 50.0% | |
CCCGAAATAAACTCGCTGCA+TGG | + | chr8.4:66438283-66438302 | MS.gene056792:intron | 50.0% | |
CGTTTGTTTGATCCTTGGGG+TGG | + | chr8.4:66436804-66436823 | MS.gene056792:CDS | 50.0% | |
GATGTTGTTCCAACAAGGCC+TGG | + | chr8.4:66433613-66433632 | MS.gene056792:CDS | 50.0% | |
GGACAAGAGGAGAACCAGAA+AGG | + | chr8.4:66438659-66438678 | MS.gene056792:CDS | 50.0% | |
GGGTCTACAAACTTGTCTGG+CGG | + | chr8.4:66435817-66435836 | MS.gene056792:intron | 50.0% | |
GGGTGTTCGTCTCTAAATGG+TGG | + | chr8.4:66436496-66436515 | MS.gene056792:CDS | 50.0% | |
GTCTGGCGGCTCTATTATCA+TGG | + | chr8.4:66435831-66435850 | MS.gene056792:CDS | 50.0% | |
GTGTGGGCAATGACTGCTTA+TGG | + | chr8.4:66437414-66437433 | MS.gene056792:CDS | 50.0% | |
TCCAAGAGATGTCAGCTGCT+TGG | - | chr8.4:66438468-66438487 | None:intergenic | 50.0% | |
TCCAAGCAGCTGACATCTCT+TGG | + | chr8.4:66438464-66438483 | MS.gene056792:intron | 50.0% | |
TGGGGTGGTTACAGCATCAT+TGG | + | chr8.4:66436819-66436838 | MS.gene056792:CDS | 50.0% | |
TTCTCTGTACAGGTAGCTCG+GGG | + | chr8.4:66436735-66436754 | MS.gene056792:intron | 50.0% | |
! | CCATGAGAGCGTGATGATAG+TGG | + | chr8.4:66436521-66436540 | MS.gene056792:CDS | 50.0% |
! | GCCCTCCAGAAGTATACTTC+TGG | - | chr8.4:66438201-66438220 | None:intergenic | 50.0% |
! | TGCAAGATTCGGTCCTACGT+TGG | + | chr8.4:66434359-66434378 | MS.gene056792:CDS | 50.0% |
! | TTCTCACAACCAGGCCTTGT+TGG | - | chr8.4:66433625-66433644 | None:intergenic | 50.0% |
!! | CCCAACTTGGATTGATGGTG+TGG | + | chr8.4:66434311-66434330 | MS.gene056792:CDS | 50.0% |
!! | GAGATCATTTTGGTGCACCG+AGG | + | chr8.4:66434618-66434637 | MS.gene056792:CDS | 50.0% |
!! | GCAGAAAGTGTTGGTTCTCG+TGG | + | chr8.4:66435575-66435594 | MS.gene056792:CDS | 50.0% |
!! | GGCTTGCTACAACAATCAGG+AGG | - | chr8.4:66434432-66434451 | None:intergenic | 50.0% |
!! | GTTGGTGTCGGTGCAAGATT+CGG | + | chr8.4:66434348-66434367 | MS.gene056792:CDS | 50.0% |
!! | TGTTGGTTCTCGTGGTTACG+TGG | + | chr8.4:66435583-66435602 | MS.gene056792:CDS | 50.0% |
!!! | GGTGTGTCTTTGGTTTTGGC+TGG | + | chr8.4:66433571-66433590 | MS.gene056792:CDS | 50.0% |
CCGAGCTGGATACTTCGTGT+GGG | + | chr8.4:66437398-66437417 | MS.gene056792:CDS | 55.0% | |
GCAAAGAAGAACCTCCGAGC+TGG | + | chr8.4:66437384-66437403 | MS.gene056792:CDS | 55.0% | |
GTAGCTCGGGGTGATAAGAG+TGG | + | chr8.4:66436747-66436766 | MS.gene056792:CDS | 55.0% | |
TCCGAGCTGGATACTTCGTG+TGG | + | chr8.4:66437397-66437416 | MS.gene056792:CDS | 55.0% | |
! | ACACGAAGTATCCAGCTCGG+AGG | - | chr8.4:66437398-66437417 | None:intergenic | 55.0% |
! | CCCACACGAAGTATCCAGCT+CGG | - | chr8.4:66437401-66437420 | None:intergenic | 55.0% |
AGGGGAAGGAAGCAGCGTCA+AGG | - | chr8.4:66436611-66436630 | None:intergenic | 60.0% | |
GGAGAAGGGGGGAGAAGCTC+CGG | - | chr8.4:66438113-66438132 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 66433517 | 66438729 | 66433517 | ID=MS.gene056792 |
chr8.4 | mRNA | 66433517 | 66438729 | 66433517 | ID=MS.gene056792.t1;Parent=MS.gene056792 |
chr8.4 | exon | 66433517 | 66433657 | 66433517 | ID=MS.gene056792.t1.exon1;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66433517 | 66433657 | 66433517 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66434303 | 66434461 | 66434303 | ID=MS.gene056792.t1.exon2;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66434303 | 66434461 | 66434303 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66434609 | 66434720 | 66434609 | ID=MS.gene056792.t1.exon3;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66434609 | 66434720 | 66434609 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66434965 | 66435084 | 66434965 | ID=MS.gene056792.t1.exon4;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66434965 | 66435084 | 66434965 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66435187 | 66435338 | 66435187 | ID=MS.gene056792.t1.exon5;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66435187 | 66435338 | 66435187 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66435554 | 66435733 | 66435554 | ID=MS.gene056792.t1.exon6;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66435554 | 66435733 | 66435554 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66435818 | 66435852 | 66435818 | ID=MS.gene056792.t1.exon7;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66435818 | 66435852 | 66435818 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66435941 | 66436103 | 66435941 | ID=MS.gene056792.t1.exon8;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66435941 | 66436103 | 66435941 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66436199 | 66436252 | 66436199 | ID=MS.gene056792.t1.exon9;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66436199 | 66436252 | 66436199 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66436450 | 66436542 | 66436450 | ID=MS.gene056792.t1.exon10;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66436450 | 66436542 | 66436450 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66436747 | 66436889 | 66436747 | ID=MS.gene056792.t1.exon11;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66436747 | 66436889 | 66436747 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66437371 | 66437441 | 66437371 | ID=MS.gene056792.t1.exon12;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66437371 | 66437441 | 66437371 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66437735 | 66437818 | 66437735 | ID=MS.gene056792.t1.exon13;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66437735 | 66437818 | 66437735 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
chr8.4 | exon | 66438611 | 66438729 | 66438611 | ID=MS.gene056792.t1.exon14;Parent=MS.gene056792.t1 |
chr8.4 | CDS | 66438611 | 66438729 | 66438611 | ID=cds.MS.gene056792.t1;Parent=MS.gene056792.t1 |
Gene Sequence |
Protein sequence |