Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070692.t1 | XP_003613059.2 | 96.6 | 942 | 31 | 1 | 48 | 989 | 34 | 974 | 0.00E+00 | 1787.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070692.t1 | Q5H8A4 | 28.2 | 1025 | 551 | 27 | 48 | 967 | 27 | 971 | 1.8e-83 | 312.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070692.t1 | G7JXN2 | 96.6 | 942 | 31 | 1 | 48 | 989 | 34 | 974 | 0.0e+00 | 1787.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049343 | MS.gene070692 | 0.809647 | 1.71E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene070692 | 0.806406 | 8.35E-50 | -1.69E-46 |
| MS.gene050156 | MS.gene070692 | 0.82366 | 1.23E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene070692 | 0.805239 | 1.47E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene070692 | 0.861109 | 1.29E-63 | -1.69E-46 |
| MS.gene056366 | MS.gene070692 | 0.807039 | 6.14E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene070692 | 0.804567 | 2.03E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 193 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTTCAGGCCATGGTTTC+TGG | 0.008228 | 5.1:+22466356 | MS.gene070692:intron |
| TGAGAAACCATTTATTTATT+TGG | 0.133141 | 5.1:+22472833 | MS.gene070692:CDS |
| CACTCTCTGCTGAGCGTATT+TGG | 0.177295 | 5.1:+22463407 | None:intergenic |
| AAAGAAATATTGGTGTATTC+TGG | 0.191103 | 5.1:-22471311 | None:intergenic |
| CTTTAAGATTGGATGGAAAA+TGG | 0.199896 | 5.1:+22466539 | MS.gene070692:CDS |
| TCGCCATCGCGATCGCAATT+TGG | 0.202172 | 5.1:-22463699 | None:intergenic |
| TATTCAGATGACAATCTTAT+TGG | 0.215209 | 5.1:+22466428 | MS.gene070692:CDS |
| CCAATCAGTTTACTTGCTTT+TGG | 0.218692 | 5.1:+22470505 | MS.gene070692:CDS |
| TTCCTGTTTCAGTGCATTAA+TGG | 0.225681 | 5.1:+22468248 | MS.gene070692:intron |
| CCTCATCCTTGTCATTAGTA+TGG | 0.228455 | 5.1:+22470672 | MS.gene070692:CDS |
| CAACTGCATGCGTCTATATT+GGG | 0.233923 | 5.1:+22473042 | MS.gene070692:CDS |
| AAAAGATTCCTTATATGTTA+TGG | 0.249030 | 5.1:+22471335 | MS.gene070692:CDS |
| GACTGTTACAACTTTAGTTT+TGG | 0.252477 | 5.1:-22471052 | None:intergenic |
| AGTCACTCAACCTTCCTTTC+AGG | 0.252880 | 5.1:+22472598 | MS.gene070692:CDS |
| ATATGATCGACTCATCTTAA+TGG | 0.256904 | 5.1:+22465926 | MS.gene070692:CDS |
| GAAATTCTCAAGTCTCTTCT+TGG | 0.263762 | 5.1:+22472739 | MS.gene070692:CDS |
| CCATGGTTTCTGGAGCAATT+GGG | 0.275681 | 5.1:+22466366 | MS.gene070692:CDS |
| CCAACAAACCAGACAGTAAA+AGG | 0.280118 | 5.1:-22471086 | None:intergenic |
| CGCCATCGCGATCGCAATTT+GGG | 0.283634 | 5.1:-22463698 | None:intergenic |
| GCCATGGTTTCTGGAGCAAT+TGG | 0.291191 | 5.1:+22466365 | MS.gene070692:CDS |
| GTTACCAGAGGTGGAAATTC+TGG | 0.291522 | 5.1:+22472715 | MS.gene070692:CDS |
| CTCTCAAATGATTGACTCTC+TGG | 0.292816 | 5.1:+22469325 | MS.gene070692:CDS |
| GACCATGGAATGACGGAAAA+TGG | 0.293403 | 5.1:+22468827 | MS.gene070692:CDS |
| AAAGATTCCTTATATGTTAT+GGG | 0.301056 | 5.1:+22471336 | MS.gene070692:CDS |
| TCAGGAATAACAAACTAATT+TGG | 0.302672 | 5.1:-22470852 | None:intergenic |
| AACCACTTCTCTCCGGTTAC+AGG | 0.303054 | 5.1:+22463576 | MS.gene070692:CDS |
| CTTCACTACTTCATCCATTT+CGG | 0.305497 | 5.1:-22468283 | None:intergenic |
| AGACGCTCCAAATAAATAAA+TGG | 0.308728 | 5.1:-22472840 | None:intergenic |
| GCAACTGCATGCGTCTATAT+TGG | 0.309592 | 5.1:+22473041 | MS.gene070692:CDS |
| ACTAAAGTTGTAACAGTCAT+TGG | 0.313749 | 5.1:+22471057 | MS.gene070692:CDS |
| GTCGGCAAACACTATTGTTT+TGG | 0.324265 | 5.1:+22472804 | MS.gene070692:CDS |
| TTGGATGGTGATTGCTGTTA+TGG | 0.336784 | 5.1:-22463510 | None:intergenic |
| TACTACTGTTATAGCTGTAT+TGG | 0.342510 | 5.1:+22471203 | MS.gene070692:CDS |
| CTGGTAGTCAATATATAAAC+TGG | 0.344237 | 5.1:+22470965 | MS.gene070692:CDS |
| GTTGCTCAATGTTCAAATCT+TGG | 0.345477 | 5.1:+22471431 | MS.gene070692:CDS |
| GCAGCACAATTCTTTAAGAT+TGG | 0.347911 | 5.1:+22466528 | MS.gene070692:intron |
| AACAGTAGTAATTCCAATAA+TGG | 0.348370 | 5.1:-22471190 | None:intergenic |
| CATGCACCCCATAACATATA+AGG | 0.354422 | 5.1:-22471343 | None:intergenic |
| GGAGGCAGAGACGCTTCATT+TGG | 0.361603 | 5.1:-22463729 | None:intergenic |
| ACCTTTGCATTCACTAATTG+TGG | 0.372511 | 5.1:-22470127 | None:intergenic |
| TTCTCCAGAATTTCCACCTC+TGG | 0.380052 | 5.1:-22472719 | None:intergenic |
| GATCATCAACTGCTTTGTTA+AGG | 0.380916 | 5.1:-22470792 | None:intergenic |
| TGATCAAGGGAAGACACTTC+TGG | 0.381403 | 5.1:+22468341 | MS.gene070692:CDS |
| GGCTTCAAAACTTTCCGAAA+TGG | 0.384174 | 5.1:+22468269 | MS.gene070692:CDS |
| TTGGATCATGTTGGTCATAT+TGG | 0.390897 | 5.1:+22468146 | MS.gene070692:CDS |
| AAAGGTAGAGACCGATGAAT+TGG | 0.392232 | 5.1:-22463529 | None:intergenic |
| GTCATATTGGTGGACGCAAC+AGG | 0.395190 | 5.1:+22468159 | MS.gene070692:CDS |
| ACGTGGCTGAAGTTATTTCC+TGG | 0.396459 | 5.1:+22466579 | MS.gene070692:CDS |
| CATGGTTTCTGGAGCAATTG+GGG | 0.397776 | 5.1:+22466367 | MS.gene070692:CDS |
| AAATTTGTACAAGACAATTC+AGG | 0.399155 | 5.1:-22470072 | None:intergenic |
| GCTTCCATAAAAGCCTTGTT+TGG | 0.403306 | 5.1:-22466128 | None:intergenic |
| GGTGCCTACTTCAGCCCTCC+AGG | 0.403766 | 5.1:-22470205 | None:intergenic |
| AACAAAGGCATTGCATTAAT+AGG | 0.406997 | 5.1:-22471408 | None:intergenic |
| CCTTTGCATTCACTAATTGT+GGG | 0.408476 | 5.1:-22470126 | None:intergenic |
| AGGTGTTATTTACCTGTAAC+CGG | 0.414486 | 5.1:-22463588 | None:intergenic |
| GATTCTTTCATTACTAATAG+TGG | 0.415489 | 5.1:+22470102 | MS.gene070692:CDS |
| GAGAAAGAAAACTGCACATC+AGG | 0.416110 | 5.1:+22470826 | MS.gene070692:CDS |
| GGTGATGTACATTTCTATGA+AGG | 0.417141 | 5.1:+22472675 | MS.gene070692:CDS |
| CAGAGACGCTTCATTTGGAT+TGG | 0.417821 | 5.1:-22463724 | None:intergenic |
| AATTTATTATAGGTCATTGA+TGG | 0.418913 | 5.1:+22466065 | MS.gene070692:intron |
| TGCCATTTGCTAGCAATGAC+TGG | 0.420982 | 5.1:-22466163 | None:intergenic |
| GACTCTCTAGCTCTATTCAT+TGG | 0.422254 | 5.1:+22468881 | MS.gene070692:CDS |
| GAATTTGTGCTTGGCAAGAA+TGG | 0.422321 | 5.1:+22466098 | MS.gene070692:CDS |
| GGCATCAAGGTGGTGTGAAT+TGG | 0.423674 | 5.1:+22470905 | MS.gene070692:CDS |
| CACAATTCTTTAAGATTGGA+TGG | 0.424720 | 5.1:+22466532 | MS.gene070692:CDS |
| CATAAACTCGATTCTCTTGT+CGG | 0.432784 | 5.1:+22472786 | MS.gene070692:CDS |
| CGCGATCGCAATTTGGGCGT+TGG | 0.433107 | 5.1:-22463692 | None:intergenic |
| CCTGAGCAGGAACTTCTTTG+TGG | 0.433112 | 5.1:-22470582 | None:intergenic |
| GATTACCGCACTATACAATC+TGG | 0.434302 | 5.1:+22472371 | MS.gene070692:intron |
| CAAAATCTTGAAAATGATCA+AGG | 0.437763 | 5.1:+22468327 | MS.gene070692:CDS |
| GATACTTCATTATTTAGGCT+TGG | 0.438485 | 5.1:+22468127 | MS.gene070692:intron |
| CACAATGTGTCTCGACATCT+TGG | 0.439256 | 5.1:+22467064 | MS.gene070692:CDS |
| AACACTTCATCCAACTTCAA+TGG | 0.447000 | 5.1:-22470634 | None:intergenic |
| TTGCCAAGCACAAATTCTGC+TGG | 0.447533 | 5.1:-22466092 | None:intergenic |
| TACTGTTCCCAAGAGCAAAA+TGG | 0.450611 | 5.1:-22472404 | None:intergenic |
| CAGTTGCCGCACAGACATAA+AGG | 0.450757 | 5.1:-22473025 | None:intergenic |
| TTGAGGAAGAGCATTACATT+TGG | 0.451559 | 5.1:+22470710 | MS.gene070692:CDS |
| CCGGAGAGAAGTGGTTTGAC+AGG | 0.455149 | 5.1:-22463569 | None:intergenic |
| CATTTCTACCTGGTTTGAGC+AGG | 0.455417 | 5.1:+22470942 | MS.gene070692:CDS |
| ATGAACTTAGCAGGGATGAC+TGG | 0.466975 | 5.1:+22467089 | MS.gene070692:CDS |
| ATAGAAAACTTGAATTGATA+AGG | 0.470456 | 5.1:-22471166 | None:intergenic |
| GATTGTCATCTGAATAAGCC+TGG | 0.474856 | 5.1:-22466421 | None:intergenic |
| CTTCCAGCAGAATTTGTGCT+TGG | 0.480465 | 5.1:+22466089 | MS.gene070692:CDS |
| GGCTTCCAACTTTAACTCCC+AGG | 0.481002 | 5.1:+22466403 | MS.gene070692:CDS |
| GGTTTCTTTGCACGTCATGA+TGG | 0.481771 | 5.1:+22466600 | MS.gene070692:CDS |
| TCCATAAAAGCCTTGTTTGG+TGG | 0.481938 | 5.1:-22466125 | None:intergenic |
| TAGGTCGCTGAAGCAACAAC+TGG | 0.482340 | 5.1:-22471389 | None:intergenic |
| CTAAAGTTGTAACAGTCATT+GGG | 0.482816 | 5.1:+22471058 | MS.gene070692:CDS |
| CACTCTTCATGATGCCTGGA+GGG | 0.483321 | 5.1:+22470191 | MS.gene070692:CDS |
| AGTTTATGCTCAGTGGTACT+AGG | 0.485437 | 5.1:-22472771 | None:intergenic |
| GGAAGAAAGCGAAGACGAAA+AGG | 0.485516 | 5.1:-22463547 | None:intergenic |
| TCAAACCAGGTAGAAATGTC+TGG | 0.485941 | 5.1:-22470937 | None:intergenic |
| CTACCACTCTTCATGATGCC+TGG | 0.487046 | 5.1:+22470187 | MS.gene070692:CDS |
| AGACATGTAGAGGTTCCATT+TGG | 0.488479 | 5.1:-22471268 | None:intergenic |
| ACCCAGTCATTGCTAGCAAA+TGG | 0.491804 | 5.1:+22466161 | MS.gene070692:CDS |
| GGTGTATTCTGGATTTCTGT+GGG | 0.495222 | 5.1:-22471300 | None:intergenic |
| ATCTTGGTGATGAACTTAGC+AGG | 0.499274 | 5.1:+22467080 | MS.gene070692:CDS |
| TTATATGAAGCCATTGAAGT+TGG | 0.499956 | 5.1:+22470624 | MS.gene070692:CDS |
| TCTACCTGGTTTGAGCAGGC+TGG | 0.500276 | 5.1:+22470946 | MS.gene070692:CDS |
| CCACAAAGAAGTTCCTGCTC+AGG | 0.504480 | 5.1:+22470582 | MS.gene070692:CDS |
| GAATGGTAAGCCACCAAACA+AGG | 0.506573 | 5.1:+22466115 | MS.gene070692:CDS |
| ACATCTTGAATCTCCTGAGC+AGG | 0.507137 | 5.1:-22470595 | None:intergenic |
| GCTAGCAATGACTGGGTGTA+TGG | 0.507554 | 5.1:-22466155 | None:intergenic |
| TATTTAGGCTTGGATCATGT+TGG | 0.507832 | 5.1:+22468137 | MS.gene070692:CDS |
| CCAAAAGCAAGTAAACTGAT+TGG | 0.508067 | 5.1:-22470505 | None:intergenic |
| CCTGTCAAACCACTTCTCTC+CGG | 0.510372 | 5.1:+22463569 | MS.gene070692:CDS |
| ATAAGCCTGGGAGTTAAAGT+TGG | 0.511151 | 5.1:-22466408 | None:intergenic |
| CTAGCAAATGGCATGGGTGT+TGG | 0.513773 | 5.1:+22466173 | MS.gene070692:CDS |
| ATGACGGAAAATGGTAATCA+TGG | 0.515368 | 5.1:+22468836 | MS.gene070692:CDS |
| CTCATCCTTGTCATTAGTAT+GGG | 0.515660 | 5.1:+22470673 | MS.gene070692:CDS |
| CTATACAATCTGGGAATGGC+AGG | 0.517691 | 5.1:+22472381 | MS.gene070692:CDS |
| TTTAGGTCTAATAATGCAGA+AGG | 0.519319 | 5.1:+22470316 | MS.gene070692:intron |
| AATGTCTGCCTCATACGATA+AGG | 0.519758 | 5.1:+22471137 | MS.gene070692:CDS |
| CTCGTGAAAAGTGCTCCAAA+TGG | 0.523706 | 5.1:+22471253 | MS.gene070692:CDS |
| CGTCTCTGCCTCCAGATCGC+CGG | 0.528905 | 5.1:+22463739 | MS.gene070692:CDS |
| CTAGCTACCATTGATGTGGC+TGG | 0.529094 | 5.1:+22472432 | MS.gene070692:CDS |
| GGGATCAAGTTCAATGATTG+AGG | 0.534626 | 5.1:+22470693 | MS.gene070692:CDS |
| AAAAGCTCCAGCCACATCAA+TGG | 0.538235 | 5.1:-22472439 | None:intergenic |
| CATTAGAACACCTGAAAGGA+AGG | 0.540582 | 5.1:-22472608 | None:intergenic |
| AAACGAGGCATGGTAACTGT+TGG | 0.544446 | 5.1:-22466218 | None:intergenic |
| CAACAACTGGAGAAGACACC+AGG | 0.547561 | 5.1:-22471376 | None:intergenic |
| TCTCAAATGATTGACTCTCT+GGG | 0.548463 | 5.1:+22469326 | MS.gene070692:CDS |
| GATCATGTTGGTCATATTGG+TGG | 0.549026 | 5.1:+22468149 | MS.gene070692:CDS |
| GGTGGCATCCTTATCGTATG+AGG | 0.552929 | 5.1:-22471145 | None:intergenic |
| AAGATTCCTTATATGTTATG+GGG | 0.559882 | 5.1:+22471337 | MS.gene070692:CDS |
| ACATCATAAGAAGTGGGTTG+AGG | 0.559913 | 5.1:+22471485 | MS.gene070692:CDS |
| ATGTGTCATGATCATCATGC+TGG | 0.560539 | 5.1:+22471002 | MS.gene070692:CDS |
| TTCTAAGCAGCGCGAGCGAG+TGG | 0.563204 | 5.1:+22470371 | MS.gene070692:CDS |
| GATGCCTGGAGGGCTGAAGT+AGG | 0.571060 | 5.1:+22470201 | MS.gene070692:CDS |
| ATGCTCAGTGGTACTAGGCA+AGG | 0.571414 | 5.1:-22472766 | None:intergenic |
| GTCATTGCTAGCAAATGGCA+TGG | 0.572962 | 5.1:+22466166 | MS.gene070692:CDS |
| CTCTGCCTCCAGATCGCCGG+AGG | 0.573045 | 5.1:+22463742 | MS.gene070692:CDS |
| GTGGATCACATCATAAGAAG+TGG | 0.574113 | 5.1:+22471478 | MS.gene070692:CDS |
| GCTAGATGAACAAAAGTTGA+GGG | 0.574172 | 5.1:+22469999 | MS.gene070692:intron |
| TAGTGAATGCAAAGGTAGCA+AGG | 0.575580 | 5.1:+22470134 | MS.gene070692:CDS |
| AGCTAGATGAACAAAAGTTG+AGG | 0.578892 | 5.1:+22469998 | MS.gene070692:intron |
| ATGGTTTCTGGAGCAATTGG+GGG | 0.579001 | 5.1:+22466368 | MS.gene070692:CDS |
| AACTGCATGCGTCTATATTG+GGG | 0.579638 | 5.1:+22473043 | MS.gene070692:CDS |
| GGGCACTGCAGTTGAACTCA+TGG | 0.582511 | 5.1:+22470019 | MS.gene070692:CDS |
| CGCACTATACAATCTGGGAA+TGG | 0.583750 | 5.1:+22472377 | MS.gene070692:CDS |
| ACCTTCCAGACATTTCTACC+TGG | 0.587070 | 5.1:+22470932 | MS.gene070692:CDS |
| CCATACTAATGACAAGGATG+AGG | 0.588076 | 5.1:-22470672 | None:intergenic |
| CAGGTTGTAGTCAGTGACCA+TGG | 0.589061 | 5.1:+22468812 | MS.gene070692:intron |
| AAGATGAGTCGATCATATGA+AGG | 0.591678 | 5.1:-22465921 | None:intergenic |
| TGGTGTATTCTGGATTTCTG+TGG | 0.592836 | 5.1:-22471301 | None:intergenic |
| ATTGTCATCTGAATAAGCCT+GGG | 0.594108 | 5.1:-22466420 | None:intergenic |
| CCACTCTTCATGATGCCTGG+AGG | 0.594433 | 5.1:+22470190 | MS.gene070692:CDS |
| TTTCCACCTCTGGTAACTAG+TGG | 0.596345 | 5.1:-22472709 | None:intergenic |
| TACTATATATGTATAAATCA+CGG | 0.597390 | 5.1:-22473084 | None:intergenic |
| CGGAGAGAAGTGGTTTGACA+GGG | 0.598713 | 5.1:-22463568 | None:intergenic |
| ATTACCGCACTATACAATCT+GGG | 0.598902 | 5.1:+22472372 | MS.gene070692:CDS |
| CGCCCAAATTGCGATCGCGA+TGG | 0.601043 | 5.1:+22463696 | MS.gene070692:CDS |
| CCCAATTGCTCCAGAAACCA+TGG | 0.601242 | 5.1:-22466366 | None:intergenic |
| ACTACCAGCCTGCTCAAACC+AGG | 0.602017 | 5.1:-22470950 | None:intergenic |
| GAAAACTTGAATTGATAAGG+TGG | 0.602741 | 5.1:-22471163 | None:intergenic |
| AAAATCTTGAAAATGATCAA+GGG | 0.602775 | 5.1:+22468328 | MS.gene070692:CDS |
| GCAATCACCATCCAATTCAT+CGG | 0.603031 | 5.1:+22463518 | MS.gene070692:CDS |
| CTCATGATATGCTGCAACAG+TGG | 0.603993 | 5.1:-22470347 | None:intergenic |
| GAACAGAAGCAGACATGTAG+AGG | 0.605271 | 5.1:-22471278 | None:intergenic |
| TCATGACGTGCAAAGAAACC+AGG | 0.608298 | 5.1:-22466597 | None:intergenic |
| TGTCCACTAGTTACCAGAGG+TGG | 0.609620 | 5.1:+22472706 | MS.gene070692:CDS |
| ACCAGGTAGAAATGTCTGGA+AGG | 0.610537 | 5.1:-22470933 | None:intergenic |
| ACTAACTTTCAAACGAGGCA+TGG | 0.614447 | 5.1:-22466228 | None:intergenic |
| TGGATCACATCATAAGAAGT+GGG | 0.622983 | 5.1:+22471479 | MS.gene070692:CDS |
| GGTGCATGTTCATAACATCC+TGG | 0.628859 | 5.1:+22471358 | MS.gene070692:CDS |
| TACACTAGCTACCATTGATG+TGG | 0.631390 | 5.1:+22472428 | MS.gene070692:CDS |
| AGTCAGTGACCATGGAATGA+CGG | 0.634656 | 5.1:+22468820 | MS.gene070692:CDS |
| GCCATTTGCTAGCAATGACT+GGG | 0.636181 | 5.1:-22466162 | None:intergenic |
| TGAACATTGAGCAACAACAA+AGG | 0.638030 | 5.1:-22471423 | None:intergenic |
| AGAAGAAGAAGACATTGTAA+CGG | 0.639113 | 5.1:-22463447 | None:intergenic |
| GTAGAGACCGATGAATTGGA+TGG | 0.642451 | 5.1:-22463525 | None:intergenic |
| TCATTGCTAGCAAATGGCAT+GGG | 0.647707 | 5.1:+22466167 | MS.gene070692:CDS |
| ATAATGTGTTGTCAGAAGCA+TGG | 0.650596 | 5.1:-22468913 | None:intergenic |
| CCTCCAGGCATCATGAAGAG+TGG | 0.653229 | 5.1:-22470190 | None:intergenic |
| GGATGGAAAATGGTTATGCA+TGG | 0.653304 | 5.1:+22466549 | MS.gene070692:CDS |
| TCATGGAGGTTCATCGTACG+AGG | 0.654983 | 5.1:+22468853 | MS.gene070692:CDS |
| TACCTGTAACCGGAGAGAAG+TGG | 0.656007 | 5.1:-22463578 | None:intergenic |
| TGAACATTAGAACACCTGAA+AGG | 0.660733 | 5.1:-22472612 | None:intergenic |
| ATGAGTCGATCATATGAAGG+AGG | 0.662578 | 5.1:-22465918 | None:intergenic |
| TGTGTCATGATCATCATGCT+GGG | 0.665415 | 5.1:+22471003 | MS.gene070692:CDS |
| ACGGAAAATGGTAATCATGG+AGG | 0.667603 | 5.1:+22468839 | MS.gene070692:CDS |
| TTGATCCCATACTAATGACA+AGG | 0.673862 | 5.1:-22470678 | None:intergenic |
| ATCTGTCCACTAGTTACCAG+AGG | 0.676378 | 5.1:+22472703 | MS.gene070692:CDS |
| TCTTGGTGATGAACTTAGCA+GGG | 0.678733 | 5.1:+22467081 | MS.gene070692:CDS |
| CCCACAATTAGTGAATGCAA+AGG | 0.687888 | 5.1:+22470126 | MS.gene070692:CDS |
| TAGGTACCTTTATGTCTGTG+CGG | 0.690244 | 5.1:+22473019 | MS.gene070692:intron |
| TTGACACTAACTTTCAAACG+AGG | 0.693802 | 5.1:-22466233 | None:intergenic |
| AGAATCGAGTTTATGCTCAG+TGG | 0.698548 | 5.1:-22472778 | None:intergenic |
| CATTCCCAGATTGTATAGTG+CGG | 0.700900 | 5.1:-22472376 | None:intergenic |
| TTAAAAGGCTGGCATCAAGG+TGG | 0.714377 | 5.1:+22470895 | MS.gene070692:CDS |
| CAAATGATTGACTCTCTGGG+AGG | 0.723264 | 5.1:+22469329 | MS.gene070692:CDS |
| TTATGCATGGTGATGATACG+TGG | 0.724937 | 5.1:+22466562 | MS.gene070692:CDS |
| TTAGTAATGAAAGAATCACA+CGG | 0.768415 | 5.1:-22470096 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 22463421 | 22473124 | 22463421 | ID=MS.gene070692 |
| chr5.1 | mRNA | 22463421 | 22473124 | 22463421 | ID=MS.gene070692.t1;Parent=MS.gene070692 |
| chr5.1 | exon | 22463421 | 22463597 | 22463421 | ID=MS.gene070692.t1.exon1;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22463421 | 22463597 | 22463421 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22463677 | 22463776 | 22463677 | ID=MS.gene070692.t1.exon2;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22463677 | 22463776 | 22463677 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22465903 | 22465947 | 22465903 | ID=MS.gene070692.t1.exon3;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22465903 | 22465947 | 22465903 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22466077 | 22466244 | 22466077 | ID=MS.gene070692.t1.exon4;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22466077 | 22466244 | 22466077 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22466365 | 22466449 | 22466365 | ID=MS.gene070692.t1.exon5;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22466365 | 22466449 | 22466365 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22466532 | 22466638 | 22466532 | ID=MS.gene070692.t1.exon6;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22466532 | 22466638 | 22466532 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22467040 | 22467120 | 22467040 | ID=MS.gene070692.t1.exon7;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22467040 | 22467120 | 22467040 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22468128 | 22468180 | 22468128 | ID=MS.gene070692.t1.exon8;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22468128 | 22468180 | 22468128 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22468260 | 22468362 | 22468260 | ID=MS.gene070692.t1.exon9;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22468260 | 22468362 | 22468260 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22468815 | 22468958 | 22468815 | ID=MS.gene070692.t1.exon10;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22468815 | 22468958 | 22468815 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22469254 | 22469350 | 22469254 | ID=MS.gene070692.t1.exon11;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22469254 | 22469350 | 22469254 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22470004 | 22470232 | 22470004 | ID=MS.gene070692.t1.exon12;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22470004 | 22470232 | 22470004 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22470321 | 22470414 | 22470321 | ID=MS.gene070692.t1.exon13;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22470321 | 22470414 | 22470321 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22470502 | 22471506 | 22470502 | ID=MS.gene070692.t1.exon14;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22470502 | 22471506 | 22470502 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22472372 | 22472464 | 22472372 | ID=MS.gene070692.t1.exon15;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22472372 | 22472464 | 22472372 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22472589 | 22472872 | 22472589 | ID=MS.gene070692.t1.exon16;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22472589 | 22472872 | 22472589 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| chr5.1 | exon | 22473022 | 22473124 | 22473022 | ID=MS.gene070692.t1.exon17;Parent=MS.gene070692.t1 |
| chr5.1 | CDS | 22473022 | 22473124 | 22473022 | ID=cds.MS.gene070692.t1;Parent=MS.gene070692.t1 |
| Gene Sequence |
| Protein sequence |
