AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070903

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070903.t1 MTR_5g031860 90.370 135 13 0 1 135 329 463 2.25e-86 259
MS.gene070903.t1 MTR_5g031840 88.148 135 16 0 1 135 321 455 2.87e-84 254
MS.gene070903.t1 MTR_5g031830 87.407 135 17 0 1 135 330 464 8.85e-84 253
MS.gene070903.t1 MTR_6g014300 45.528 123 66 1 13 134 336 458 9.66e-38 133
MS.gene070903.t1 MTR_6g014270 46.610 118 62 1 18 134 354 471 8.84e-36 128
MS.gene070903.t1 MTR_5g464810 50.000 130 60 4 8 135 345 471 2.09e-35 127
MS.gene070903.t1 MTR_5g064240 50.000 130 60 4 8 135 345 471 2.09e-35 127
MS.gene070903.t1 MTR_6g014200 45.378 119 64 1 18 135 352 470 2.22e-35 127
MS.gene070903.t1 MTR_6g014190 43.697 119 66 1 18 135 162 280 2.47e-35 123
MS.gene070903.t1 MTR_6g014150 46.218 119 63 1 18 135 352 470 2.52e-35 127
MS.gene070903.t1 MTR_0477s0010 43.902 123 68 1 13 134 187 309 3.60e-35 124
MS.gene070903.t1 MTR_8g007585 44.915 118 64 1 18 134 267 384 4.77e-35 125
MS.gene070903.t1 MTR_6g013450 44.915 118 64 1 18 134 356 473 8.65e-35 125
MS.gene070903.t1 MTR_0288s0020 44.715 123 67 1 13 134 331 453 1.04e-34 125
MS.gene070903.t1 MTR_0036s0220 49.231 130 61 4 8 135 345 471 1.18e-34 125
MS.gene070903.t1 MTR_7g011470 43.089 123 69 1 13 134 332 454 1.93e-34 124
MS.gene070903.t1 MTR_7g011470 43.089 123 69 1 13 134 336 458 1.98e-34 124
MS.gene070903.t1 MTR_6g013960 45.299 117 63 1 19 134 356 472 2.79e-34 124
MS.gene070903.t1 MTR_6g014220 44.068 118 65 1 18 134 353 470 3.18e-34 124
MS.gene070903.t1 MTR_6g014050 42.975 121 68 1 16 135 354 474 3.28e-34 124
MS.gene070903.t1 MTR_6g014310 43.089 123 69 1 13 134 351 473 7.92e-34 123
MS.gene070903.t1 MTR_6g013920 46.610 118 62 1 18 134 354 471 1.07e-33 122
MS.gene070903.t1 MTR_6g013990 44.915 118 64 1 18 134 353 470 1.42e-33 122
MS.gene070903.t1 MTR_8g059425 44.915 118 64 1 18 134 353 470 2.68e-33 121
MS.gene070903.t1 MTR_6g014250 43.220 118 66 1 18 134 353 470 2.79e-33 121
MS.gene070903.t1 MTR_6g013900 44.068 118 65 1 18 134 354 471 3.68e-33 121
MS.gene070903.t1 MTR_5g464760 50.000 126 58 4 11 134 350 472 4.94e-33 120
MS.gene070903.t1 MTR_6g014187 43.697 119 66 1 18 135 355 473 6.98e-33 120
MS.gene070903.t1 MTR_8g043470 42.857 119 67 1 18 135 253 371 8.45e-33 119
MS.gene070903.t1 MTR_5g066390 43.443 122 60 3 18 134 90 207 1.26e-32 114
MS.gene070903.t1 MTR_6g014000 41.406 128 74 1 8 134 21 148 1.72e-32 119
MS.gene070903.t1 MTR_3g008010 42.373 118 67 1 18 134 353 470 1.79e-32 119
MS.gene070903.t1 MTR_6g013440 41.463 123 71 1 13 134 351 473 2.19e-32 119
MS.gene070903.t1 MTR_4g094220 44.531 128 65 2 7 133 348 470 2.36e-32 119
MS.gene070903.t1 MTR_6g014290 41.176 119 69 1 18 135 353 471 2.59e-32 119
MS.gene070903.t1 MTR_6g014170 44.068 118 65 1 18 134 337 454 4.36e-32 118
MS.gene070903.t1 MTR_6g011340 44.915 118 64 1 18 134 355 472 8.58e-32 117
MS.gene070903.t1 MTR_2086s0010 39.167 120 72 1 17 135 46 165 9.50e-32 111
MS.gene070903.t1 MTR_1996s0010 39.167 120 72 1 17 135 46 165 9.50e-32 111
MS.gene070903.t1 MTR_0891s0010 41.667 120 69 1 17 135 164 283 9.62e-32 114
MS.gene070903.t1 MTR_5g058320 43.220 118 66 1 18 134 340 457 9.97e-32 117
MS.gene070903.t1 MTR_3g069710 45.763 118 63 1 18 134 327 444 1.57e-31 116
MS.gene070903.t1 MTR_6g014040 44.068 118 65 1 18 134 356 473 2.34e-31 116
MS.gene070903.t1 MTR_6g014020 41.525 118 68 1 18 134 355 472 9.35e-31 114
MS.gene070903.t1 MTR_3g479520 43.333 120 67 1 17 135 357 476 1.52e-30 114
MS.gene070903.t1 MTR_2g008210 45.902 122 64 2 16 135 349 470 1.68e-30 114
MS.gene070903.t1 MTR_8g012730 43.939 132 65 4 7 129 165 296 4.07e-30 110
MS.gene070903.t1 MTR_3g479470 43.697 119 66 1 17 134 354 472 7.59e-30 112
MS.gene070903.t1 MTR_6g014185 41.322 121 69 2 16 134 217 337 1.03e-29 110
MS.gene070903.t1 MTR_6g014240 42.017 119 68 1 18 135 322 440 1.13e-29 111
MS.gene070903.t1 MTR_4g064987 50.000 94 47 0 18 111 327 420 1.32e-29 111
MS.gene070903.t1 MTR_4g064987 50.000 94 47 0 18 111 321 414 1.44e-29 111
MS.gene070903.t1 MTR_3g479610 40.000 120 71 1 17 135 187 306 1.95e-29 108
MS.gene070903.t1 MTR_1g107380 44.697 132 66 3 9 135 337 466 2.46e-29 110
MS.gene070903.t1 MTR_3g069690 42.373 118 66 1 19 134 325 442 4.07e-29 110
MS.gene070903.t1 MTR_3g479490 39.167 120 72 1 17 135 348 467 4.76e-29 110
MS.gene070903.t1 MTR_8g012630 43.066 137 69 4 7 134 272 408 5.18e-29 109
MS.gene070903.t1 MTR_8g088560 42.446 139 74 3 2 134 312 450 7.34e-29 109
MS.gene070903.t1 MTR_8g012650 44.361 133 65 4 7 130 328 460 1.29e-28 108
MS.gene070903.t1 MTR_3g079480 40.336 119 70 1 17 134 363 481 2.80e-28 108
MS.gene070903.t1 MTR_8g012635 43.066 137 69 4 7 134 328 464 5.70e-28 107
MS.gene070903.t1 MTR_7g080950 39.416 137 76 3 3 134 306 440 8.55e-28 106
MS.gene070903.t1 MTR_7g102560 41.667 144 62 4 13 136 337 478 2.08e-27 105
MS.gene070903.t1 MTR_7g080900 36.957 138 79 3 3 134 313 448 6.40e-27 103
MS.gene070903.t1 MTR_8g009050 44.800 125 63 3 16 134 335 459 9.08e-27 103
MS.gene070903.t1 MTR_8g083280 39.370 127 69 2 17 135 329 455 1.04e-26 103
MS.gene070903.t1 MTR_6g038240 43.548 124 65 2 16 134 324 447 1.35e-26 103
MS.gene070903.t1 MTR_7g013220 39.516 124 61 2 19 134 326 443 2.85e-26 102
MS.gene070903.t1 MTR_6g038230 38.806 134 75 3 7 135 317 448 4.10e-26 102
MS.gene070903.t1 MTR_0184s0030 41.667 132 66 4 5 130 330 456 4.54e-26 102
MS.gene070903.t1 MTR_0536s0020 39.073 151 73 5 3 134 322 472 5.31e-26 101
MS.gene070903.t1 MTR_8g012745 39.855 138 73 5 8 136 327 463 5.98e-26 101
MS.gene070903.t1 MTR_8g008990 43.802 121 62 3 16 130 337 457 6.31e-26 101
MS.gene070903.t1 MTR_4g117950 39.189 148 71 4 3 134 311 455 7.41e-26 101
MS.gene070903.t1 MTR_7g102450 36.424 151 78 3 4 136 316 466 7.72e-26 101
MS.gene070903.t1 MTR_8g066610 43.478 138 67 3 8 134 333 470 8.31e-26 101
MS.gene070903.t1 MTR_4g128720 40.984 122 70 2 16 135 328 449 8.80e-26 100
MS.gene070903.t1 MTR_8g009055 44.628 121 61 3 16 130 335 455 8.95e-26 100
MS.gene070903.t1 MTR_4g485630 38.281 128 67 3 19 134 339 466 9.62e-26 100
MS.gene070903.t1 MTR_2g046820 42.149 121 64 3 20 134 335 455 1.19e-25 100
MS.gene070903.t1 MTR_7g102490 37.857 140 71 4 13 136 342 481 1.80e-25 100
MS.gene070903.t1 MTR_5g035560 41.667 144 65 4 7 134 304 444 2.27e-25 100
MS.gene070903.t1 MTR_7g013240 37.190 121 70 2 19 135 315 433 3.32e-25 99.4
MS.gene070903.t1 MTR_1g062380 40.667 150 70 4 4 134 337 486 3.33e-25 99.8
MS.gene070903.t1 MTR_0536s0010 40.541 148 69 4 3 134 325 469 3.41e-25 99.4
MS.gene070903.t1 MTR_4g117960 38.411 151 74 5 3 134 323 473 3.75e-25 99.4
MS.gene070903.t1 MTR_7g102550 38.411 151 75 3 4 136 330 480 4.92e-25 99.0
MS.gene070903.t1 MTR_3g084530 43.651 126 55 4 20 134 345 465 8.40e-25 98.2
MS.gene070903.t1 MTR_8g009840 42.500 120 63 3 16 130 396 514 8.48e-25 98.6
MS.gene070903.t1 MTR_6g038220 37.600 125 73 2 16 135 323 447 1.04e-24 97.8
MS.gene070903.t1 MTR_8g083290 41.732 127 66 3 17 135 331 457 1.06e-24 98.2
MS.gene070903.t1 MTR_5g035580 40.288 139 72 3 4 134 311 446 1.28e-24 97.8
MS.gene070903.t1 MTR_6g038200 37.600 125 73 2 16 135 324 448 1.39e-24 97.8
MS.gene070903.t1 MTR_6g038300 40.458 131 72 3 9 134 319 448 1.47e-24 97.4
MS.gene070903.t1 MTR_0536s0030 38.411 151 76 4 3 136 196 346 1.59e-24 96.7
MS.gene070903.t1 MTR_8g077590 40.157 127 70 3 14 134 333 459 1.61e-24 97.4
MS.gene070903.t1 MTR_8g006260 43.307 127 66 2 16 136 338 464 1.63e-24 97.4
MS.gene070903.t1 MTR_7g102520 39.333 150 74 3 4 136 334 483 1.95e-24 97.4
MS.gene070903.t1 MTR_5g070090 42.017 119 61 2 19 130 333 450 1.99e-24 97.4
MS.gene070903.t1 MTR_4g485620 42.553 141 68 4 5 134 309 447 2.73e-24 97.1
MS.gene070903.t1 MTR_3g084520 42.308 130 69 2 12 135 337 466 2.96e-24 97.1
MS.gene070903.t1 MTR_1g019510 38.843 121 68 3 16 130 332 452 3.04e-24 96.7
MS.gene070903.t1 MTR_7g013260 37.190 121 70 2 19 135 316 434 3.44e-24 96.3
MS.gene070903.t1 MTR_2g035020 36.806 144 75 3 7 134 331 474 4.04e-24 96.7
MS.gene070903.t1 MTR_7g013200 35.537 121 72 3 19 135 315 433 4.11e-24 96.3
MS.gene070903.t1 MTR_4g031800 38.356 146 71 4 5 134 323 465 4.39e-24 96.3
MS.gene070903.t1 MTR_4g117980 35.811 148 79 3 3 134 327 474 4.78e-24 96.3
MS.gene070903.t1 MTR_4g094920 37.037 135 75 3 5 134 343 472 8.28e-24 95.9
MS.gene070903.t1 MTR_4g118000 38.776 147 71 4 4 134 316 459 8.63e-24 95.5
MS.gene070903.t1 MTR_8g006730 41.600 125 66 3 17 134 335 459 9.13e-24 95.5
MS.gene070903.t1 MTR_4g024020 34.591 159 79 4 1 134 322 480 1.03e-23 95.5
MS.gene070903.t1 MTR_8g009063 40.496 121 66 3 16 130 342 462 1.26e-23 95.1
MS.gene070903.t1 MTR_4g128690 40.625 128 69 3 5 130 319 441 1.29e-23 95.1
MS.gene070903.t1 MTR_2g035040 35.135 148 80 3 3 134 232 379 1.34e-23 94.4
MS.gene070903.t1 MTR_6g488280 41.270 126 67 3 16 134 332 457 1.40e-23 94.7
MS.gene070903.t1 MTR_0428s0010 41.270 126 67 3 16 134 332 457 1.40e-23 94.7
MS.gene070903.t1 MTR_8g008970 41.667 132 68 4 8 130 646 777 1.78e-23 95.1
MS.gene070903.t1 MTR_8g008970 51.807 83 38 2 16 97 333 414 2.99e-22 91.7
MS.gene070903.t1 MTR_7g102460 37.313 134 68 4 19 136 346 479 2.08e-23 94.7
MS.gene070903.t1 MTR_6g005600 40.000 125 69 3 16 134 336 460 2.12e-23 94.4
MS.gene070903.t1 MTR_5g045970 38.158 152 71 4 4 134 336 485 2.34e-23 94.4
MS.gene070903.t1 MTR_4g117890 37.313 134 68 3 17 134 334 467 3.18e-23 94.0
MS.gene070903.t1 MTR_7g117170 41.732 127 64 5 16 134 344 468 3.20e-23 94.0
MS.gene070903.t1 MTR_2g034990 36.806 144 75 3 7 134 331 474 3.73e-23 94.0
MS.gene070903.t1 MTR_7g117405 36.486 148 75 4 7 136 329 475 4.80e-23 93.6
MS.gene070903.t1 MTR_7g071040 36.735 147 76 4 5 134 337 483 5.00e-23 93.6
MS.gene070903.t1 MTR_7g080940 36.496 137 80 3 3 134 311 445 5.30e-23 93.2
MS.gene070903.t1 MTR_7g080935 36.496 137 80 3 3 134 311 445 6.81e-23 92.8
MS.gene070903.t1 MTR_5g067170 36.806 144 75 3 7 134 329 472 7.93e-23 92.8
MS.gene070903.t1 MTR_3g049970 38.168 131 72 2 11 134 334 462 1.06e-22 92.4
MS.gene070903.t1 MTR_3g084540 40.984 122 65 2 20 134 345 466 1.12e-22 92.4
MS.gene070903.t1 MTR_2g040530 40.650 123 63 3 20 134 337 457 1.17e-22 92.4
MS.gene070903.t1 MTR_6g023665 39.683 126 69 3 16 134 339 464 1.21e-22 92.4
MS.gene070903.t1 MTR_8g027870 39.669 121 67 3 16 130 341 461 1.22e-22 92.4
MS.gene070903.t1 MTR_1g019520 38.017 121 69 3 16 130 81 201 1.29e-22 89.0
MS.gene070903.t1 MTR_4g485640 36.842 133 69 3 18 135 528 660 1.39e-22 92.4
MS.gene070903.t1 MTR_1g107375 34.109 129 78 3 11 134 320 446 1.46e-22 92.0
MS.gene070903.t1 MTR_6g035265 36.842 133 69 3 17 134 334 466 1.48e-22 92.0
MS.gene070903.t1 MTR_7g013180 34.167 120 73 2 19 134 323 440 1.63e-22 91.7
MS.gene070903.t1 MTR_2g046750 39.669 121 67 2 20 134 338 458 1.64e-22 92.0
MS.gene070903.t1 MTR_2g059240 40.000 125 63 4 19 135 342 462 1.66e-22 92.0
MS.gene070903.t1 MTR_6g035295 37.209 129 66 2 21 134 349 477 1.88e-22 92.0
MS.gene070903.t1 MTR_8g009073 51.220 82 38 2 17 97 205 285 1.97e-22 90.5
MS.gene070903.t1 MTR_7g012120 35.417 144 77 3 7 134 333 476 1.99e-22 91.7
MS.gene070903.t1 MTR_8g009067 50.602 83 39 2 16 97 215 296 2.10e-22 90.9
MS.gene070903.t1 MTR_8g006710 41.803 122 64 3 16 130 333 454 2.20e-22 91.7
MS.gene070903.t1 MTR_4g108250 35.135 148 79 4 4 134 333 480 2.51e-22 91.7
MS.gene070903.t1 MTR_7g070610 36.913 149 76 5 4 134 331 479 2.56e-22 91.7
MS.gene070903.t1 MTR_1g107360 37.008 127 71 3 11 130 326 450 3.21e-22 91.3
MS.gene070903.t1 MTR_6g033660 38.095 126 72 3 16 135 332 457 3.37e-22 91.3
MS.gene070903.t1 MTR_8g009073 51.220 82 38 2 17 97 334 414 3.40e-22 90.9
MS.gene070903.t1 MTR_8g009067 38.889 126 69 4 16 134 333 457 4.25e-22 90.9
MS.gene070903.t1 MTR_5g029800 35.211 142 76 3 9 134 329 470 4.88e-22 90.5
MS.gene070903.t1 MTR_6g033725 37.500 136 77 3 3 130 314 449 6.05e-22 90.5
MS.gene070903.t1 MTR_5g045960 49.398 83 41 1 4 85 330 412 6.23e-22 90.5
MS.gene070903.t1 MTR_7g070995 37.879 132 66 5 19 134 6 137 6.75e-22 85.5
MS.gene070903.t1 MTR_8g027885 39.669 121 67 3 16 130 341 461 7.97e-22 90.1
MS.gene070903.t1 MTR_4g095008 35.556 135 77 3 5 134 328 457 1.08e-21 89.7
MS.gene070903.t1 MTR_8g064870 37.008 127 71 3 16 134 341 466 1.17e-21 89.7
MS.gene070903.t1 MTR_3g009510 40.476 126 68 4 16 134 344 469 1.22e-21 89.7
MS.gene070903.t1 MTR_1g107365 36.434 129 75 3 11 134 358 484 1.25e-21 89.7
MS.gene070903.t1 MTR_5g090670 37.121 132 68 4 16 134 340 469 1.36e-21 89.4
MS.gene070903.t1 MTR_7g070810 35.762 151 76 5 4 134 319 468 1.43e-21 89.4
MS.gene070903.t1 MTR_5g090580 37.008 127 67 4 16 130 338 463 1.49e-21 89.4
MS.gene070903.t1 MTR_6g033625 37.226 137 78 3 2 130 316 452 1.58e-21 89.4
MS.gene070903.t1 MTR_8g006270 34.884 129 79 1 7 130 324 452 1.81e-21 89.0
MS.gene070903.t1 MTR_3g009490 36.508 126 73 3 16 134 56 181 1.85e-21 85.5
MS.gene070903.t1 MTR_6g035185 35.862 145 76 3 7 134 331 475 1.96e-21 89.0
MS.gene070903.t1 MTR_5g098930 36.552 145 72 5 7 134 319 460 2.07e-21 89.0
MS.gene070903.t1 MTR_1g107350 35.714 140 79 4 2 130 318 457 2.33e-21 88.6
MS.gene070903.t1 MTR_7g070940 38.806 134 64 4 18 134 333 465 2.35e-21 88.6
MS.gene070903.t1 MTR_6g014160 62.745 51 19 0 18 68 307 357 4.84e-21 87.4
MS.gene070903.t1 MTR_8g090095 40.336 119 63 3 20 130 350 468 5.14e-21 87.8
MS.gene070903.t1 MTR_5g070040 42.609 115 42 4 19 114 340 449 5.92e-21 87.4
MS.gene070903.t1 MTR_1g107325 35.433 127 75 2 16 135 220 346 8.16e-21 86.7
MS.gene070903.t1 MTR_7g070800 35.811 148 78 4 4 134 321 468 8.75e-21 87.0
MS.gene070903.t1 MTR_5g090630 35.115 131 72 4 16 134 329 458 1.12e-20 86.7
MS.gene070903.t1 MTR_7g047030 41.748 103 52 3 8 102 323 425 1.17e-20 86.7
MS.gene070903.t1 MTR_7g047270 41.748 103 52 3 8 102 323 425 1.17e-20 86.7
MS.gene070903.t1 MTR_7g070740 35.374 147 78 4 5 134 330 476 1.20e-20 86.7
MS.gene070903.t1 MTR_7g070780 35.570 149 77 6 4 134 329 476 1.22e-20 86.7
MS.gene070903.t1 MTR_5g040030 32.653 147 83 4 4 134 334 480 1.51e-20 86.7
MS.gene070903.t1 MTR_5g090610 35.115 131 72 4 16 134 324 453 1.94e-20 86.3
MS.gene070903.t1 MTR_5g090700 34.646 127 70 4 20 134 344 469 2.12e-20 85.9
MS.gene070903.t1 MTR_8g465670 39.098 133 64 5 16 134 334 463 2.46e-20 85.9
MS.gene070903.t1 MTR_0184s0040 34.400 125 76 3 16 134 349 473 2.50e-20 85.9
MS.gene070903.t1 MTR_0078s0190 34.400 125 76 3 16 134 349 473 2.50e-20 85.9
MS.gene070903.t1 MTR_5g098960 39.560 91 55 0 11 101 319 409 2.58e-20 85.9
MS.gene070903.t1 MTR_6g033615 43.011 93 49 2 2 90 302 394 2.60e-20 85.9
MS.gene070903.t1 MTR_8g044140 33.108 148 83 4 4 135 295 442 2.95e-20 85.5
MS.gene070903.t1 MTR_7g046490 39.200 125 70 3 16 134 332 456 3.54e-20 85.5
MS.gene070903.t1 MTR_5g072860 36.220 127 72 3 18 135 333 459 3.69e-20 85.5
MS.gene070903.t1 MTR_8g006220 50.000 72 35 1 16 86 341 412 4.03e-20 85.1
MS.gene070903.t1 MTR_8g032950 35.252 139 74 3 12 134 335 473 4.22e-20 85.1
MS.gene070903.t1 MTR_1g107315 34.286 140 84 3 2 134 323 461 4.53e-20 85.1
MS.gene070903.t1 MTR_1g032490 36.641 131 74 2 11 134 335 463 7.37e-20 84.3
MS.gene070903.t1 MTR_5g090600 33.588 131 74 4 16 134 317 446 9.12e-20 84.3
MS.gene070903.t1 MTR_7g070660 34.228 149 80 4 4 134 324 472 9.76e-20 84.3
MS.gene070903.t1 MTR_0078s0010 40.777 103 53 3 8 102 323 425 1.22e-19 84.0
MS.gene070903.t1 MTR_7g070860 34.483 145 77 4 7 134 312 455 1.29e-19 84.0
MS.gene070903.t1 MTR_5g090620 34.109 129 68 3 20 134 343 468 1.29e-19 84.0
MS.gene070903.t1 MTR_8g056740 44.037 109 56 4 3 108 220 326 1.82e-19 83.2
MS.gene070903.t1 MTR_7g070930 34.014 147 80 4 5 134 334 480 1.99e-19 83.2
MS.gene070903.t1 MTR_4g485590 51.899 79 34 2 11 85 303 381 2.53e-19 82.8
MS.gene070903.t1 MTR_0009s0240 35.821 134 80 3 6 134 319 451 2.98e-19 82.8
MS.gene070903.t1 MTR_5g090660 34.091 132 72 4 16 134 336 465 3.39e-19 82.8
MS.gene070903.t1 MTR_1g029540 34.351 131 79 2 7 130 318 448 4.15e-19 82.4
MS.gene070903.t1 MTR_1g040310 34.109 129 71 2 21 135 349 477 5.03e-19 82.0
MS.gene070903.t1 MTR_0078s0060 34.307 137 80 5 8 134 322 458 5.52e-19 82.0
MS.gene070903.t1 MTR_6g033675 46.835 79 41 1 16 93 333 411 5.84e-19 82.0
MS.gene070903.t1 MTR_7g055710 33.784 148 81 4 4 134 329 476 7.74e-19 81.6
MS.gene070903.t1 MTR_5g019580 36.154 130 69 5 16 134 369 495 1.70e-18 80.9
MS.gene070903.t1 MTR_5g019580 36.154 130 69 5 16 134 345 471 1.73e-18 80.5
MS.gene070903.t1 MTR_7g039550 33.594 128 71 2 21 134 127 254 1.80e-18 79.3
MS.gene070903.t1 MTR_4g008630 43.023 86 49 0 7 92 321 406 1.81e-18 80.5
MS.gene070903.t1 MTR_7g080960 36.441 118 61 2 17 134 360 463 1.93e-18 80.5
MS.gene070903.t1 MTR_8g064880 38.095 105 55 3 11 108 340 441 1.95e-18 80.5
MS.gene070903.t1 MTR_7g070910 33.333 147 81 4 5 134 331 477 2.33e-18 80.1
MS.gene070903.t1 MTR_5g016660 32.215 149 84 3 3 134 328 476 2.70e-18 80.1
MS.gene070903.t1 MTR_5g072810 35.938 128 71 2 18 134 319 446 3.65e-18 79.7
MS.gene070903.t1 MTR_8g466240 38.710 124 63 5 19 134 328 446 4.30e-18 79.3
MS.gene070903.t1 MTR_5g016480 32.824 131 78 3 5 130 334 459 5.53e-18 79.3
MS.gene070903.t1 MTR_1g107285 33.333 132 78 3 11 134 327 456 8.54e-18 78.6
MS.gene070903.t1 MTR_8g074550 35.664 143 73 7 9 134 341 481 9.28e-18 78.6
MS.gene070903.t1 MTR_5g039900 32.824 131 73 3 19 134 346 476 1.37e-17 78.2
MS.gene070903.t1 MTR_4g082820 38.400 125 70 4 17 135 334 457 1.63e-17 77.8
MS.gene070903.t1 MTR_8g071070 33.824 136 80 4 6 134 329 461 1.98e-17 77.8
MS.gene070903.t1 MTR_5g004940 30.579 121 70 2 16 135 264 371 3.25e-17 76.6
MS.gene070903.t1 MTR_5g075440 41.935 93 52 1 4 96 311 401 4.74e-17 76.6
MS.gene070903.t1 MTR_7g071050 37.391 115 60 4 4 112 285 393 2.13e-16 74.7
MS.gene070903.t1 MTR_7g470610 43.902 82 44 2 4 83 186 267 2.50e-16 73.6
MS.gene070903.t1 MTR_7g070583 43.902 82 44 2 4 83 186 267 2.50e-16 73.6
MS.gene070903.t1 MTR_5g072830 35.156 128 72 2 18 134 314 441 2.58e-16 74.3
MS.gene070903.t1 MTR_5g072840 35.156 128 72 2 18 134 314 441 3.07e-16 74.3
MS.gene070903.t1 MTR_5g072820 35.433 127 71 2 19 134 315 441 1.10e-15 72.8
MS.gene070903.t1 MTR_5g027210 32.203 118 62 3 19 118 358 475 1.12e-15 72.8
MS.gene070903.t1 MTR_5g087620 34.677 124 70 3 18 130 359 482 1.54e-15 72.4
MS.gene070903.t1 MTR_4g082810 48.333 60 30 1 17 75 336 395 2.22e-15 71.6
MS.gene070903.t1 MTR_0475s0030 44.444 63 35 0 37 99 13 75 2.65e-15 67.0
MS.gene070903.t1 MTR_7g070870 34.815 135 75 4 4 134 326 451 2.79e-15 71.6
MS.gene070903.t1 MTR_3g031450 32.800 125 75 2 20 135 321 445 6.09e-15 70.5
MS.gene070903.t1 MTR_2g098430 45.070 71 38 1 8 77 332 402 2.06e-14 68.9
MS.gene070903.t1 MTR_3g031400 32.800 125 75 2 20 135 319 443 2.25e-14 68.9
MS.gene070903.t1 MTR_7g067330 31.452 124 65 3 11 133 295 399 1.33e-13 66.6
MS.gene070903.t1 MTR_7g067120 34.862 109 66 3 11 115 295 402 1.42e-13 66.6
MS.gene070903.t1 MTR_8g068360 43.662 71 39 1 8 77 328 398 2.41e-13 65.9
MS.gene070903.t1 MTR_6g078320 34.454 119 69 4 18 129 351 467 4.83e-13 65.1
MS.gene070903.t1 MTR_6g015160 49.020 51 25 1 37 86 30 80 1.14e-12 60.1
MS.gene070903.t1 MTR_7g070760 43.077 65 37 0 21 85 137 201 3.84e-12 61.2
MS.gene070903.t1 MTR_5g072850 45.763 59 32 0 20 78 270 328 6.00e-12 62.0
MS.gene070903.t1 MTR_8g068340 39.785 93 53 3 8 98 329 420 7.77e-12 61.6
MS.gene070903.t1 MTR_2g014900 33.673 98 59 2 16 107 322 419 2.47e-11 60.1
MS.gene070903.t1 MTR_6g013680 32.710 107 44 3 29 134 288 367 3.11e-11 59.7
MS.gene070903.t1 MTR_8g007650 38.983 59 35 1 18 75 337 395 5.81e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070903.t1 AT5G05900 50.420 119 58 1 18 135 323 441 5.91e-36 128
MS.gene070903.t1 AT5G05880 47.899 119 61 1 18 135 324 442 2.88e-34 124
MS.gene070903.t1 AT5G05890 47.059 119 62 1 18 135 328 446 2.52e-33 121
MS.gene070903.t1 AT3G11340 41.667 132 71 2 5 135 312 438 5.77e-33 120
MS.gene070903.t1 AT3G46660 46.218 119 63 1 18 135 331 449 7.92e-33 120
MS.gene070903.t1 AT1G22400 46.721 122 63 2 16 135 354 475 1.49e-32 119
MS.gene070903.t1 AT1G78270 48.780 123 60 3 16 135 352 474 1.86e-32 119
MS.gene070903.t1 AT1G22380 45.902 122 64 2 16 135 353 474 2.86e-32 119
MS.gene070903.t1 AT5G05870 48.718 117 59 1 19 134 331 447 7.79e-32 117
MS.gene070903.t1 AT5G05860 45.455 132 66 2 5 135 315 441 3.64e-31 115
MS.gene070903.t1 AT3G46670 45.763 118 63 1 19 135 325 442 7.76e-31 114
MS.gene070903.t1 AT5G38010 44.068 118 65 1 18 134 329 446 2.56e-30 113
MS.gene070903.t1 AT5G59580 42.373 118 67 1 18 134 323 440 7.64e-30 112
MS.gene070903.t1 AT5G38040 40.299 134 76 2 2 134 312 442 8.58e-30 112
MS.gene070903.t1 AT1G22360 44.355 124 67 2 15 136 349 472 8.64e-29 109
MS.gene070903.t1 AT2G26480 38.760 129 78 1 7 134 310 438 1.21e-28 108
MS.gene070903.t1 AT5G17040 41.935 124 66 3 16 135 210 331 1.53e-28 107
MS.gene070903.t1 AT5G17030 40.152 132 74 3 8 134 317 448 2.94e-28 107
MS.gene070903.t1 AT5G17040 40.426 141 74 5 2 135 296 433 3.47e-28 107
MS.gene070903.t1 AT5G59590 41.525 118 68 1 18 134 325 442 3.72e-28 107
MS.gene070903.t1 AT3G55710 43.697 119 64 2 18 134 330 447 5.22e-28 107
MS.gene070903.t1 AT4G15550 39.683 126 68 1 18 135 342 467 1.36e-27 106
MS.gene070903.t1 AT4G15480 38.298 141 80 1 2 135 332 472 1.78e-27 105
MS.gene070903.t1 AT3G46720 42.373 118 67 1 18 134 316 433 2.78e-27 105
MS.gene070903.t1 AT3G53160 37.589 141 71 3 13 136 337 477 4.04e-27 105
MS.gene070903.t1 AT1G22340 44.262 122 66 2 16 135 354 475 4.13e-27 104
MS.gene070903.t1 AT5G17050 39.568 139 78 4 2 135 313 450 4.73e-27 104
MS.gene070903.t1 AT1G22370 43.902 123 67 2 16 136 178 300 5.40e-27 102
MS.gene070903.t1 AT1G22360 49.524 105 47 3 15 118 349 448 6.07e-27 104
MS.gene070903.t1 AT5G26310 45.000 120 57 4 16 128 335 452 6.21e-27 104
MS.gene070903.t1 AT3G55700 42.373 118 67 1 18 134 326 443 6.40e-27 104
MS.gene070903.t1 AT3G46680 40.336 119 70 1 18 135 325 443 6.95e-27 103
MS.gene070903.t1 AT3G02100 44.444 117 60 2 22 134 337 452 1.11e-26 103
MS.gene070903.t1 AT2G43840 38.406 138 79 2 3 134 302 439 2.46e-26 102
MS.gene070903.t1 AT2G43840 38.406 138 79 2 3 134 302 439 2.53e-26 102
MS.gene070903.t1 AT1G05680 45.763 118 59 2 18 130 324 441 4.10e-26 102
MS.gene070903.t1 AT1G22370 43.902 123 67 2 16 136 348 470 4.12e-26 102
MS.gene070903.t1 AT3G46700 41.525 118 68 1 18 134 320 437 5.89e-26 101
MS.gene070903.t1 AT2G43820 36.957 138 81 2 3 134 302 439 8.76e-26 100
MS.gene070903.t1 AT1G05675 44.262 122 63 2 18 134 324 445 9.08e-26 100
MS.gene070903.t1 AT2G15490 39.855 138 72 4 7 134 337 473 9.59e-26 101
MS.gene070903.t1 AT2G15490 39.855 138 72 4 7 134 334 470 9.83e-26 100
MS.gene070903.t1 AT4G34138 41.727 139 69 3 2 130 331 467 1.83e-25 100
MS.gene070903.t1 AT2G36760 38.571 140 70 2 11 134 342 481 2.22e-25 100
MS.gene070903.t1 AT2G36780 36.879 141 72 3 13 136 343 483 3.76e-25 99.4
MS.gene070903.t1 AT3G46690 42.373 118 67 1 18 134 325 442 7.91e-25 98.2
MS.gene070903.t1 AT2G36790 37.410 139 70 4 13 134 342 480 1.26e-24 98.2
MS.gene070903.t1 AT2G36800 36.879 141 72 3 13 136 342 482 1.31e-24 97.8
MS.gene070903.t1 AT3G46650 39.496 119 71 1 18 135 308 426 1.61e-24 97.4
MS.gene070903.t1 AT5G66690 44.167 120 58 4 16 128 335 452 2.22e-24 97.4
MS.gene070903.t1 AT2G23260 36.364 132 78 3 11 136 317 448 3.67e-24 96.7
MS.gene070903.t1 AT2G31790 36.000 125 75 2 11 130 321 445 5.61e-24 95.9
MS.gene070903.t1 AT2G36750 36.296 135 69 3 17 134 342 476 7.29e-24 95.9
MS.gene070903.t1 AT1G05560 38.060 134 74 2 6 135 317 445 7.92e-24 95.5
MS.gene070903.t1 AT1G05560 38.060 134 74 2 6 135 367 495 9.44e-24 95.5
MS.gene070903.t1 AT2G15480 35.714 140 81 2 4 134 334 473 1.01e-23 95.5
MS.gene070903.t1 AT2G31750 37.097 124 71 2 18 134 324 447 1.08e-23 95.1
MS.gene070903.t1 AT2G36770 36.691 139 71 3 13 134 343 481 1.16e-23 95.5
MS.gene070903.t1 AT2G31750 37.097 124 71 2 18 134 324 447 1.33e-23 95.1
MS.gene070903.t1 AT1G07250 38.583 127 65 3 14 130 338 461 1.34e-23 95.1
MS.gene070903.t1 AT1G05530 38.060 134 74 2 6 135 320 448 1.40e-23 94.7
MS.gene070903.t1 AT3G50740 41.803 122 60 4 16 128 340 459 4.48e-23 93.6
MS.gene070903.t1 AT1G30530 40.650 123 71 2 16 136 323 445 4.84e-23 93.6
MS.gene070903.t1 AT2G15480 34.000 150 80 2 4 134 334 483 5.00e-23 93.6
MS.gene070903.t1 AT2G23250 37.410 139 80 4 3 134 290 428 7.85e-23 92.8
MS.gene070903.t1 AT4G36770 45.055 91 46 2 16 102 333 423 9.40e-23 92.8
MS.gene070903.t1 AT1G01420 42.609 115 56 4 16 124 336 446 3.97e-22 90.9
MS.gene070903.t1 AT1G01420 42.609 115 56 4 16 124 339 449 4.51e-22 90.9
MS.gene070903.t1 AT2G29730 31.200 125 78 1 19 135 332 456 7.44e-22 90.1
MS.gene070903.t1 AT1G24100 38.636 132 72 3 8 130 316 447 9.21e-22 89.7
MS.gene070903.t1 AT4G15490 36.620 142 78 3 1 135 324 460 1.05e-21 89.7
MS.gene070903.t1 AT2G29710 30.282 142 91 1 2 135 315 456 1.29e-21 89.4
MS.gene070903.t1 AT4G15500 37.302 126 72 1 17 135 331 456 1.42e-21 89.4
MS.gene070903.t1 AT4G01070 36.220 127 75 3 16 136 336 462 1.84e-21 89.0
MS.gene070903.t1 AT3G16520 37.037 135 78 3 5 134 320 452 2.17e-21 89.0
MS.gene070903.t1 AT4G14090 35.000 140 81 4 3 135 313 449 3.81e-21 88.2
MS.gene070903.t1 AT2G36970 35.772 123 76 2 17 136 343 465 5.13e-21 87.8
MS.gene070903.t1 AT3G21560 35.714 140 79 2 3 135 331 466 6.13e-21 87.8
MS.gene070903.t1 AT3G16520 42.718 103 54 2 5 102 320 422 9.15e-21 87.0
MS.gene070903.t1 AT3G16520 42.718 103 54 2 5 102 320 422 9.49e-21 87.0
MS.gene070903.t1 AT2G30140 35.294 136 76 3 8 134 312 444 9.52e-21 87.0
MS.gene070903.t1 AT4G34131 36.957 138 75 4 8 134 336 472 9.71e-21 87.0
MS.gene070903.t1 AT2G30140 35.294 136 76 3 8 134 311 443 1.06e-20 87.0
MS.gene070903.t1 AT2G18570 39.844 128 68 4 16 134 332 459 1.47e-20 86.7
MS.gene070903.t1 AT2G29740 35.000 120 69 2 20 131 346 464 3.46e-20 85.5
MS.gene070903.t1 AT1G07260 38.400 125 66 4 16 131 339 461 5.78e-20 84.7
MS.gene070903.t1 AT1G73880 37.190 121 70 3 19 134 340 459 1.39e-19 84.0
MS.gene070903.t1 AT4G34135 39.568 139 72 3 8 134 336 474 2.22e-19 83.2
MS.gene070903.t1 AT3G53150 46.154 78 41 1 7 83 348 425 2.40e-19 83.2
MS.gene070903.t1 AT2G28080 35.897 117 71 3 4 116 333 449 3.34e-19 82.8
MS.gene070903.t1 AT1G01390 55.556 63 27 1 16 77 353 415 3.83e-19 82.4
MS.gene070903.t1 AT1G01390 55.556 63 27 1 16 77 336 398 4.16e-19 82.4
MS.gene070903.t1 AT2G30150 33.824 136 78 3 8 134 297 429 7.39e-19 81.6
MS.gene070903.t1 AT2G30150 33.824 136 78 3 8 134 313 445 9.34e-19 81.3
MS.gene070903.t1 AT2G29750 46.377 69 37 0 18 86 344 412 1.33e-18 80.9
MS.gene070903.t1 AT1G07240 34.921 126 71 3 16 130 339 464 1.62e-18 80.9
MS.gene070903.t1 AT4G15260 32.258 155 84 3 1 135 195 348 1.86e-18 80.1
MS.gene070903.t1 AT3G21760 48.611 72 37 0 16 87 344 415 2.36e-18 80.5
MS.gene070903.t1 AT5G14860 37.121 132 73 5 13 134 337 468 2.67e-18 80.1
MS.gene070903.t1 AT2G18560 35.156 128 74 3 16 134 242 369 5.55e-18 79.0
MS.gene070903.t1 AT3G22250 36.170 94 57 1 16 106 339 432 5.93e-18 79.0
MS.gene070903.t1 AT3G21800 48.235 85 39 2 5 86 324 406 1.14e-17 78.2
MS.gene070903.t1 AT3G21790 46.479 71 38 0 16 86 341 411 1.28e-17 78.2
MS.gene070903.t1 AT2G16890 34.615 130 75 4 17 136 333 462 3.51e-17 77.0
MS.gene070903.t1 AT4G15280 45.070 71 39 0 16 86 337 407 3.65e-17 77.0
MS.gene070903.t1 AT4G15280 45.070 71 39 0 16 86 369 439 3.78e-17 77.0
MS.gene070903.t1 AT3G21750 45.570 79 43 0 16 94 332 410 4.58e-17 76.6
MS.gene070903.t1 AT1G06000 31.250 128 80 4 13 134 301 426 6.41e-17 76.3
MS.gene070903.t1 AT5G03490 34.848 132 74 5 13 135 328 456 2.64e-16 74.3
MS.gene070903.t1 AT2G16890 48.529 68 34 1 17 83 333 400 1.13e-15 72.4
MS.gene070903.t1 AT3G21780 43.662 71 40 0 16 86 332 402 1.35e-15 72.4
MS.gene070903.t1 AT1G51210 35.537 121 73 2 2 117 313 433 2.41e-15 71.6
MS.gene070903.t1 AT5G12890 52.113 71 31 3 5 72 334 404 5.29e-15 70.9
MS.gene070903.t1 AT5G65550 42.857 70 38 2 17 85 332 400 1.07e-12 64.3
MS.gene070903.t1 AT1G10400 32.000 125 77 4 18 134 331 455 1.96e-12 63.5
MS.gene070903.t1 AT5G49690 46.667 60 31 1 17 75 325 384 2.40e-12 63.2
MS.gene070903.t1 AT1G64910 33.750 80 52 1 8 86 300 379 1.85e-11 60.5
MS.gene070903.t1 AT5G53990 36.250 80 50 1 8 86 300 379 7.09e-11 58.9
MS.gene070903.t1 AT5G37950 53.488 43 20 0 18 60 295 337 8.78e-11 58.5
MS.gene070903.t1 AT5G37950 53.488 43 20 0 18 60 301 343 9.59e-11 58.5

Find 39 sgRNAs with CRISPR-Local

Find 41 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATATACTGAATCAAATT+TGG 0.207041 5.4:+19287982 None:intergenic
TGCTATTGAAATGGCGGATT+TGG 0.219461 5.4:-19288048 MS.gene070903:CDS
ATTTGTTGATCAGCAAAATA+AGG 0.280250 5.4:+19288197 None:intergenic
GTGAGTGAGGTTTGGAAGCT+TGG 0.307721 5.4:-19288161 MS.gene070903:CDS
CCAAACATGGTACAAGAAAA+AGG 0.313624 5.4:-19288389 None:intergenic
CTGATCAACAAATTAATAGT+AGG 0.360356 5.4:-19288187 MS.gene070903:CDS
CCACCCACTATGTGTCAAAA+AGG 0.361214 5.4:+19288268 None:intergenic
TAGGAATGTTGTTGAGAAAA+TGG 0.389004 5.4:-19288114 MS.gene070903:CDS
TTCAAGATCTGCTATTGAAA+TGG 0.395191 5.4:-19288057 MS.gene070903:CDS
TCAAATTTGGAGGTTGTTGT+AGG 0.395937 5.4:+19287995 None:intergenic
GTAGGTTTGTGAGTGAGGTT+TGG 0.420544 5.4:-19288169 MS.gene070903:CDS
GAAAGGGATGATTGTGGGGT+GGG 0.454518 5.4:-19288330 MS.gene070903:CDS
AAATAAGGCCAACATATCAT+AGG 0.459700 5.4:+19288212 None:intergenic
TTGTTGTAGGAGGAACCATT+AGG 0.462958 5.4:+19288008 None:intergenic
TCCAAGAGTGTAAGTCCTAA+TGG 0.463911 5.4:-19288023 MS.gene070903:CDS
ATATACTGAATCAAATTTGG+AGG 0.472274 5.4:+19287985 None:intergenic
AAAGAGAAAGGGATGATTGT+GGG 0.472351 5.4:-19288335 MS.gene070903:CDS
TAATAGTAGGTTTGTGAGTG+AGG 0.474155 5.4:-19288174 MS.gene070903:CDS
TGAGGTTTGGAAGCTTGGAT+TGG 0.475109 5.4:-19288156 MS.gene070903:CDS
ACCATTAGGACTTACACTCT+TGG 0.484150 5.4:+19288022 None:intergenic
GAAGGGACTACTAAAGAGAA+AGG 0.498754 5.4:-19288347 MS.gene070903:CDS
ACTTTGGAGAGTGTGGTTTG+TGG 0.515528 5.4:-19288239 MS.gene070903:CDS
ATATGAAAGATGTTTGTGAT+AGG 0.519622 5.4:-19288133 MS.gene070903:CDS
TAGTGGGTGGAACTCTACTT+TGG 0.543912 5.4:-19288255 MS.gene070903:CDS
GTGGCGTGCCTATGATATGT+TGG 0.544947 5.4:-19288220 MS.gene070903:CDS
GAACTCTACTTTGGAGAGTG+TGG 0.546332 5.4:-19288246 MS.gene070903:CDS
AATTTGGAGGTTGTTGTAGG+AGG 0.550886 5.4:+19287998 None:intergenic
TGTGACAAAACTTCCTCTTG+TGG 0.551208 5.4:+19288305 None:intergenic
TGATATTATGATGAACAAGA+AGG 0.557986 5.4:-19288087 MS.gene070903:CDS
CTATTGAAGGAGCTTGAGGA+AGG 0.558458 5.4:-19288365 MS.gene070903:CDS
AAGATCTGCTATTGAAATGG+CGG 0.566824 5.4:-19288054 MS.gene070903:CDS
TAAAGAGAAAGGGATGATTG+TGG 0.571564 5.4:-19288336 MS.gene070903:CDS
AGGACTATTGAAGGAGCTTG+AGG 0.572112 5.4:-19288369 MS.gene070903:CDS
AGAAAGGGATGATTGTGGGG+TGG 0.586735 5.4:-19288331 MS.gene070903:CDS
TGTGGGGTGGGTTCCACAAG+AGG 0.592500 5.4:-19288318 MS.gene070903:CDS
AAGGGACTACTAAAGAGAAA+GGG 0.595105 5.4:-19288346 MS.gene070903:CDS
AAGAGAAAGGGATGATTGTG+GGG 0.603887 5.4:-19288334 MS.gene070903:CDS
TATTGAAGGAGCTTGAGGAA+GGG 0.618899 5.4:-19288364 MS.gene070903:CDS
TATTATGATGAACAAGAAGG+AGG 0.632410 5.4:-19288084 MS.gene070903:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATATGAAAGATGTTTGTGAT+AGG - chr5.4:19288245-19288264 MS.gene070903:CDS 25.0%
! CTGATCAACAAATTAATAGT+AGG - chr5.4:19288191-19288210 MS.gene070903:CDS 25.0%
! TGATATTATGATGAACAAGA+AGG - chr5.4:19288291-19288310 MS.gene070903:CDS 25.0%
!! ATTTGTTGATCAGCAAAATA+AGG + chr5.4:19288184-19288203 None:intergenic 25.0%
AAATAAGGCCAACATATCAT+AGG + chr5.4:19288169-19288188 None:intergenic 30.0%
ACAAGAAAAAGGACTATTGA+AGG - chr5.4:19288000-19288019 MS.gene070903:CDS 30.0%
TAGGAATGTTGTTGAGAAAA+TGG - chr5.4:19288264-19288283 MS.gene070903:CDS 30.0%
TATTATGATGAACAAGAAGG+AGG - chr5.4:19288294-19288313 MS.gene070903:CDS 30.0%
TTCAAGATCTGCTATTGAAA+TGG - chr5.4:19288321-19288340 MS.gene070903:CDS 30.0%
AAAGAGAAAGGGATGATTGT+GGG - chr5.4:19288043-19288062 MS.gene070903:CDS 35.0%
AAGATCTGCTATTGAAATGG+CGG - chr5.4:19288324-19288343 MS.gene070903:CDS 35.0%
AAGGGACTACTAAAGAGAAA+GGG - chr5.4:19288032-19288051 MS.gene070903:CDS 35.0%
TAAAGAGAAAGGGATGATTG+TGG - chr5.4:19288042-19288061 MS.gene070903:CDS 35.0%
TAATAGTAGGTTTGTGAGTG+AGG - chr5.4:19288204-19288223 MS.gene070903:CDS 35.0%
TCAAATTTGGAGGTTGTTGT+AGG + chr5.4:19288386-19288405 None:intergenic 35.0%
! GTTTTGTCACACAAAGCAAT+TGG - chr5.4:19288085-19288104 MS.gene070903:CDS 35.0%
AAGAGAAAGGGATGATTGTG+GGG - chr5.4:19288044-19288063 MS.gene070903:CDS 40.0%
AATTTGGAGGTTGTTGTAGG+AGG + chr5.4:19288383-19288402 None:intergenic 40.0%
ACCATTAGGACTTACACTCT+TGG + chr5.4:19288359-19288378 None:intergenic 40.0%
GAAGGGACTACTAAAGAGAA+AGG - chr5.4:19288031-19288050 MS.gene070903:CDS 40.0%
TATTGAAGGAGCTTGAGGAA+GGG - chr5.4:19288014-19288033 MS.gene070903:CDS 40.0%
TGTGACAAAACTTCCTCTTG+TGG + chr5.4:19288076-19288095 None:intergenic 40.0%
TTGTTGTAGGAGGAACCATT+AGG + chr5.4:19288373-19288392 None:intergenic 40.0%
! GTGCCTTTTTGACACATAGT+GGG - chr5.4:19288107-19288126 MS.gene070903:CDS 40.0%
! TCCAAGAGTGTAAGTCCTAA+TGG - chr5.4:19288355-19288374 MS.gene070903:CDS 40.0%
!! TGCTATTGAAATGGCGGATT+TGG - chr5.4:19288330-19288349 MS.gene070903:CDS 40.0%
AGGACTATTGAAGGAGCTTG+AGG - chr5.4:19288009-19288028 MS.gene070903:CDS 45.0%
CCACCCACTATGTGTCAAAA+AGG + chr5.4:19288113-19288132 None:intergenic 45.0%
CTATTGAAGGAGCTTGAGGA+AGG - chr5.4:19288013-19288032 MS.gene070903:CDS 45.0%
GTAGGTTTGTGAGTGAGGTT+TGG - chr5.4:19288209-19288228 MS.gene070903:CDS 45.0%
TGAGGTTTGGAAGCTTGGAT+TGG - chr5.4:19288222-19288241 MS.gene070903:CDS 45.0%
! ACTTTGGAGAGTGTGGTTTG+TGG - chr5.4:19288139-19288158 MS.gene070903:CDS 45.0%
! GAACTCTACTTTGGAGAGTG+TGG - chr5.4:19288132-19288151 MS.gene070903:CDS 45.0%
! GGTGCCTTTTTGACACATAG+TGG - chr5.4:19288106-19288125 MS.gene070903:CDS 45.0%
! TAGTGGGTGGAACTCTACTT+TGG - chr5.4:19288123-19288142 MS.gene070903:CDS 45.0%
!! CCTTTTTGACACATAGTGGG+TGG - chr5.4:19288110-19288129 MS.gene070903:CDS 45.0%
AGAAAGGGATGATTGTGGGG+TGG - chr5.4:19288047-19288066 MS.gene070903:CDS 50.0%
GAAAGGGATGATTGTGGGGT+GGG - chr5.4:19288048-19288067 MS.gene070903:CDS 50.0%
GTGAGTGAGGTTTGGAAGCT+TGG - chr5.4:19288217-19288236 MS.gene070903:CDS 50.0%
GTGGCGTGCCTATGATATGT+TGG - chr5.4:19288158-19288177 MS.gene070903:CDS 50.0%
! TGTGGGGTGGGTTCCACAAG+AGG - chr5.4:19288060-19288079 MS.gene070903:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 19287995 19288405 19287995 ID=MS.gene070903
chr5.4 mRNA 19287995 19288405 19287995 ID=MS.gene070903.t1;Parent=MS.gene070903
chr5.4 exon 19287995 19288405 19287995 ID=MS.gene070903.t1.exon1;Parent=MS.gene070903.t1
chr5.4 CDS 19287995 19288405 19287995 ID=cds.MS.gene070903.t1;Parent=MS.gene070903.t1
Gene Sequence

>MS.gene070903

ATGGTACAAGAAAAAGGACTATTGAAGGAGCTTGAGGAAGGGACTACTAAAGAGAAAGGGATGATTGTGGGGTGGGTTCCACAAGAGGAAGTTTTGTCACACAAAGCAATTGGTGCCTTTTTGACACATAGTGGGTGGAACTCTACTTTGGAGAGTGTGGTTTGTGGCGTGCCTATGATATGTTGGCCTTATTTTGCTGATCAACAAATTAATAGTAGGTTTGTGAGTGAGGTTTGGAAGCTTGGATTGGATATGAAAGATGTTTGTGATAGGAATGTTGTTGAGAAAATGGTGAATGATATTATGATGAACAAGAAGGAGGAGTTTTCAAGATCTGCTATTGAAATGGCGGATTTGGCTTCCAAGAGTGTAAGTCCTAATGGTTCCTCCTACAACAACCTCCAAATTTGA
Protein sequence

>MS.gene070903.t1

MVQEKGLLKELEEGTTKEKGMIVGWVPQEEVLSHKAIGAFLTHSGWNSTLESVVCGVPMICWPYFADQQINSRFVSEVWKLGLDMKDVCDRNVVEKMVNDIMMNKKEEFSRSAIEMADLASKSVSPNGSSYNNLQI