Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053184.t1 | KEH28561.1 | 81.2 | 133 | 16 | 3 | 1 | 128 | 1 | 129 | 2.80E-44 | 188 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053184.t1 | A0A072UGJ1 | 81.2 | 133 | 16 | 3 | 1 | 128 | 1 | 129 | 2.0e-44 | 188.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene053184 | 0.807149 | 5.82E-50 | -1.69E-46 |
MS.gene049153 | MS.gene053184 | 0.80236 | 5.82E-49 | -1.69E-46 |
MS.gene049758 | MS.gene053184 | 0.805878 | 1.08E-49 | -1.69E-46 |
MS.gene050442 | MS.gene053184 | 0.80889 | 2.48E-50 | -1.69E-46 |
MS.gene051265 | MS.gene053184 | 0.800435 | 1.44E-48 | -1.69E-46 |
MS.gene051860 | MS.gene053184 | 0.824604 | 7.38E-54 | -1.69E-46 |
MS.gene053074 | MS.gene053184 | 0.822151 | 2.76E-53 | -1.69E-46 |
MS.gene053184 | MS.gene053836 | 0.817498 | 3.20E-52 | -1.69E-46 |
MS.gene053184 | MS.gene054184 | 0.806746 | 7.08E-50 | -1.69E-46 |
MS.gene053184 | MS.gene054185 | 0.81196 | 5.39E-51 | -1.69E-46 |
MS.gene053184 | MS.gene054473 | 0.803323 | 3.68E-49 | -1.69E-46 |
MS.gene053184 | MS.gene054542 | 0.820575 | 6.38E-53 | -1.69E-46 |
MS.gene053184 | MS.gene054713 | 0.804708 | 1.90E-49 | -1.69E-46 |
MS.gene053184 | MS.gene054930 | 0.800095 | 1.69E-48 | -1.69E-46 |
MS.gene053184 | MS.gene055356 | 0.82163 | 3.65E-53 | -1.69E-46 |
MS.gene053184 | MS.gene055357 | 0.802969 | 4.36E-49 | -1.69E-46 |
MS.gene053184 | MS.gene055358 | 0.837857 | 4.06E-57 | -1.69E-46 |
MS.gene053184 | MS.gene057469 | 0.809345 | 1.98E-50 | -1.69E-46 |
MS.gene053184 | MS.gene057750 | 0.808717 | 2.70E-50 | -1.69E-46 |
MS.gene053184 | MS.gene057754 | 0.818605 | 1.80E-52 | -1.69E-46 |
MS.gene053184 | MS.gene058168 | 0.811592 | 6.48E-51 | -1.69E-46 |
MS.gene053184 | MS.gene059124 | 0.829031 | 6.46E-55 | -1.69E-46 |
MS.gene053184 | MS.gene059128 | 0.81086 | 9.34E-51 | -1.69E-46 |
MS.gene053184 | MS.gene060998 | 0.806391 | 8.42E-50 | -1.69E-46 |
MS.gene053184 | MS.gene061333 | 0.838432 | 2.89E-57 | -1.69E-46 |
MS.gene053184 | MS.gene061334 | 0.844097 | 9.34E-59 | -1.69E-46 |
MS.gene053184 | MS.gene062354 | 0.801709 | 7.92E-49 | -1.69E-46 |
MS.gene053184 | MS.gene062429 | 0.810763 | 9.80E-51 | -1.69E-46 |
MS.gene053184 | MS.gene062853 | 0.812477 | 4.16E-51 | -1.69E-46 |
MS.gene053184 | MS.gene063426 | 0.81431 | 1.64E-51 | -1.69E-46 |
MS.gene053184 | MS.gene065054 | 0.804847 | 1.77E-49 | -1.69E-46 |
MS.gene053184 | MS.gene065581 | 0.814621 | 1.40E-51 | -1.69E-46 |
MS.gene053184 | MS.gene066206 | 0.825092 | 5.66E-54 | -1.69E-46 |
MS.gene053184 | MS.gene066433 | 0.807097 | 5.97E-50 | -1.69E-46 |
MS.gene053184 | MS.gene066865 | 0.805762 | 1.14E-49 | -1.69E-46 |
MS.gene053184 | MS.gene066866 | 0.806029 | 1.00E-49 | -1.69E-46 |
MS.gene053184 | MS.gene066868 | 0.80468 | 1.92E-49 | -1.69E-46 |
MS.gene053184 | MS.gene066941 | 0.810461 | 1.14E-50 | -1.69E-46 |
MS.gene053184 | MS.gene067305 | 0.80739 | 5.18E-50 | -1.69E-46 |
MS.gene053184 | MS.gene068609 | 0.803761 | 2.99E-49 | -1.69E-46 |
MS.gene053184 | MS.gene069142 | 0.811229 | 7.77E-51 | -1.69E-46 |
MS.gene053184 | MS.gene069680 | 0.800732 | 1.26E-48 | -1.69E-46 |
MS.gene053184 | MS.gene069681 | 0.802167 | 6.38E-49 | -1.69E-46 |
MS.gene053184 | MS.gene070491 | 0.821252 | 4.46E-53 | -1.69E-46 |
MS.gene053184 | MS.gene070511 | 0.809702 | 1.66E-50 | -1.69E-46 |
MS.gene053184 | MS.gene070898 | 0.803612 | 3.21E-49 | -1.69E-46 |
MS.gene053184 | MS.gene070903 | 0.813246 | 2.82E-51 | -1.69E-46 |
MS.gene053184 | MS.gene071062 | 0.80019 | 1.62E-48 | -1.69E-46 |
MS.gene053184 | MS.gene07115 | 0.842197 | 3.00E-58 | -1.69E-46 |
MS.gene053184 | MS.gene071407 | 0.810773 | 9.76E-51 | -1.69E-46 |
MS.gene053184 | MS.gene07344 | 0.810894 | 9.19E-51 | -1.69E-46 |
MS.gene053184 | MS.gene073696 | 0.823076 | 1.68E-53 | -1.69E-46 |
MS.gene053184 | MS.gene07942 | 0.807191 | 5.70E-50 | -1.69E-46 |
MS.gene053184 | MS.gene09136 | 0.805691 | 1.18E-49 | -1.69E-46 |
MS.gene053184 | MS.gene09668 | 0.810522 | 1.11E-50 | -1.69E-46 |
MS.gene053184 | MS.gene20556 | 0.812659 | 3.79E-51 | -1.69E-46 |
MS.gene053184 | MS.gene20635 | 0.801282 | 9.69E-49 | -1.69E-46 |
MS.gene053184 | MS.gene21881 | 0.804871 | 1.75E-49 | -1.69E-46 |
MS.gene053184 | MS.gene22133 | 0.808841 | 2.54E-50 | -1.69E-46 |
MS.gene053184 | MS.gene23009 | 0.857631 | 1.43E-62 | -1.69E-46 |
MS.gene053184 | MS.gene23372 | 0.822524 | 2.26E-53 | -1.69E-46 |
MS.gene053184 | MS.gene24247 | 0.810104 | 1.36E-50 | -1.69E-46 |
MS.gene053184 | MS.gene25859 | 0.810304 | 1.23E-50 | -1.69E-46 |
MS.gene053184 | MS.gene25868 | 0.823447 | 1.38E-53 | -1.69E-46 |
MS.gene053184 | MS.gene26752 | 0.816355 | 5.77E-52 | -1.69E-46 |
MS.gene053184 | MS.gene27008 | 0.812965 | 3.25E-51 | -1.69E-46 |
MS.gene053184 | MS.gene28498 | 0.802783 | 4.76E-49 | -1.69E-46 |
MS.gene053184 | MS.gene29986 | 0.800311 | 1.53E-48 | -1.69E-46 |
MS.gene053184 | MS.gene30689 | 0.806929 | 6.48E-50 | -1.69E-46 |
MS.gene053184 | MS.gene31519 | 0.808081 | 3.69E-50 | -1.69E-46 |
MS.gene053184 | MS.gene31604 | 0.818001 | 2.46E-52 | -1.69E-46 |
MS.gene053184 | MS.gene31609 | 0.821346 | 4.24E-53 | -1.69E-46 |
MS.gene053184 | MS.gene34106 | 0.800714 | 1.27E-48 | -1.69E-46 |
MS.gene053184 | MS.gene34220 | 0.823798 | 1.14E-53 | -1.69E-46 |
MS.gene053184 | MS.gene35408 | 0.828908 | 6.92E-55 | -1.69E-46 |
MS.gene053184 | MS.gene35428 | 0.820194 | 7.80E-53 | -1.69E-46 |
MS.gene053184 | MS.gene35822 | 0.804165 | 2.46E-49 | -1.69E-46 |
MS.gene053184 | MS.gene35824 | 0.80413 | 2.50E-49 | -1.69E-46 |
MS.gene053184 | MS.gene35867 | 0.802869 | 4.57E-49 | -1.69E-46 |
MS.gene053184 | MS.gene35910 | 0.803314 | 3.70E-49 | -1.69E-46 |
MS.gene053184 | MS.gene37213 | 0.803947 | 2.73E-49 | -1.69E-46 |
MS.gene053184 | MS.gene37517 | 0.805427 | 1.34E-49 | -1.69E-46 |
MS.gene053184 | MS.gene38528 | 0.819604 | 1.06E-52 | -1.69E-46 |
MS.gene053184 | MS.gene40106 | 0.80429 | 2.32E-49 | -1.69E-46 |
MS.gene053184 | MS.gene41915 | 0.802727 | 4.89E-49 | -1.69E-46 |
MS.gene053184 | MS.gene43040 | 0.834533 | 2.84E-56 | -1.69E-46 |
MS.gene053184 | MS.gene43800 | 0.80898 | 2.37E-50 | -1.69E-46 |
MS.gene053184 | MS.gene45090 | 0.820297 | 7.39E-53 | -1.69E-46 |
MS.gene053184 | MS.gene45193 | 0.818211 | 2.21E-52 | -1.69E-46 |
MS.gene053184 | MS.gene45194 | 0.802617 | 5.15E-49 | -1.69E-46 |
MS.gene053184 | MS.gene45771 | 0.803216 | 3.88E-49 | -1.69E-46 |
MS.gene053184 | MS.gene46176 | 0.80764 | 4.58E-50 | -1.69E-46 |
MS.gene053184 | MS.gene46374 | 0.802744 | 4.85E-49 | -1.69E-46 |
MS.gene053184 | MS.gene47283 | 0.815712 | 8.03E-52 | -1.69E-46 |
MS.gene053184 | MS.gene48577 | 0.832261 | 1.05E-55 | -1.69E-46 |
MS.gene053184 | MS.gene49486 | 0.806554 | 7.78E-50 | -1.69E-46 |
MS.gene053184 | MS.gene49665 | 0.806828 | 6.80E-50 | -1.69E-46 |
MS.gene053184 | MS.gene49839 | 0.819026 | 1.44E-52 | -1.69E-46 |
MS.gene053184 | MS.gene50595 | 0.800825 | 1.20E-48 | -1.69E-46 |
MS.gene053184 | MS.gene51067 | 0.803931 | 2.75E-49 | -1.69E-46 |
MS.gene053184 | MS.gene51570 | 0.809978 | 1.45E-50 | -1.69E-46 |
MS.gene053184 | MS.gene53143 | 0.801815 | 7.53E-49 | -1.69E-46 |
MS.gene053184 | MS.gene53586 | 0.809494 | 1.84E-50 | -1.69E-46 |
MS.gene053184 | MS.gene54020 | 0.82733 | 1.66E-54 | -1.69E-46 |
MS.gene053184 | MS.gene54138 | 0.805099 | 1.57E-49 | -1.69E-46 |
MS.gene053184 | MS.gene55625 | 0.818248 | 2.16E-52 | -1.69E-46 |
MS.gene053184 | MS.gene56053 | 0.812013 | 5.25E-51 | -1.69E-46 |
MS.gene053184 | MS.gene56057 | 0.8512 | 1.04E-60 | -1.69E-46 |
MS.gene053184 | MS.gene56842 | 0.814053 | 1.87E-51 | -1.69E-46 |
MS.gene053184 | MS.gene57565 | 0.824184 | 9.26E-54 | -1.69E-46 |
MS.gene053184 | MS.gene57566 | 0.826601 | 2.48E-54 | -1.69E-46 |
MS.gene053184 | MS.gene57643 | 0.808262 | 3.38E-50 | -1.69E-46 |
MS.gene053184 | MS.gene57945 | 0.806991 | 6.29E-50 | -1.69E-46 |
MS.gene053184 | MS.gene58375 | 0.80378 | 2.96E-49 | -1.69E-46 |
MS.gene053184 | MS.gene59149 | 0.811306 | 7.48E-51 | -1.69E-46 |
MS.gene053184 | MS.gene59355 | 0.809886 | 1.52E-50 | -1.69E-46 |
MS.gene053184 | MS.gene59442 | 0.803288 | 3.74E-49 | -1.69E-46 |
MS.gene053184 | MS.gene59876 | 0.801997 | 6.91E-49 | -1.69E-46 |
MS.gene053184 | MS.gene60204 | 0.815351 | 9.67E-52 | -1.69E-46 |
MS.gene053184 | MS.gene60206 | 0.81094 | 8.98E-51 | -1.69E-46 |
MS.gene053184 | MS.gene60903 | 0.802818 | 4.68E-49 | -1.69E-46 |
MS.gene053184 | MS.gene61139 | 0.809326 | 2.00E-50 | -1.69E-46 |
MS.gene053184 | MS.gene61670 | 0.811319 | 7.43E-51 | -1.69E-46 |
MS.gene053184 | MS.gene62480 | 0.836515 | 8.95E-57 | -1.69E-46 |
MS.gene053184 | MS.gene62720 | 0.80674 | 7.10E-50 | -1.69E-46 |
MS.gene053184 | MS.gene63288 | 0.808427 | 3.11E-50 | -1.69E-46 |
MS.gene053184 | MS.gene63507 | 0.826163 | 3.15E-54 | -1.69E-46 |
MS.gene053184 | MS.gene64425 | 0.811709 | 6.11E-51 | -1.69E-46 |
MS.gene053184 | MS.gene64621 | 0.820621 | 6.23E-53 | -1.69E-46 |
MS.gene053184 | MS.gene65418 | 0.847966 | 8.28E-60 | -1.69E-46 |
MS.gene053184 | MS.gene65665 | 0.822858 | 1.89E-53 | -1.69E-46 |
MS.gene053184 | MS.gene66964 | 0.82768 | 1.37E-54 | -1.69E-46 |
MS.gene053184 | MS.gene67105 | 0.838367 | 3.00E-57 | -1.69E-46 |
MS.gene053184 | MS.gene67387 | 0.809107 | 2.23E-50 | -1.69E-46 |
MS.gene053184 | MS.gene68036 | 0.807332 | 5.32E-50 | -1.69E-46 |
MS.gene053184 | MS.gene68168 | 0.814103 | 1.83E-51 | -1.69E-46 |
MS.gene053184 | MS.gene68764 | 0.824277 | 8.81E-54 | -1.69E-46 |
MS.gene053184 | MS.gene68819 | 0.81785 | 2.66E-52 | -1.69E-46 |
MS.gene053184 | MS.gene68923 | 0.824689 | 7.05E-54 | -1.69E-46 |
MS.gene053184 | MS.gene69575 | 0.815535 | 8.80E-52 | -1.69E-46 |
MS.gene053184 | MS.gene69794 | 0.836713 | 7.96E-57 | -1.69E-46 |
MS.gene053184 | MS.gene70021 | 0.828808 | 7.32E-55 | -1.69E-46 |
MS.gene053184 | MS.gene70022 | 0.823018 | 1.74E-53 | -1.69E-46 |
MS.gene053184 | MS.gene70819 | 0.819247 | 1.28E-52 | -1.69E-46 |
MS.gene053184 | MS.gene71203 | 0.827935 | 1.19E-54 | -1.69E-46 |
MS.gene053184 | MS.gene71456 | 0.80581 | 1.12E-49 | -1.69E-46 |
MS.gene053184 | MS.gene72268 | 0.810735 | 9.94E-51 | -1.69E-46 |
MS.gene053184 | MS.gene72466 | 0.804612 | 1.99E-49 | -1.69E-46 |
MS.gene053184 | MS.gene72812 | 0.804929 | 1.71E-49 | -1.69E-46 |
MS.gene053184 | MS.gene73257 | 0.825905 | 3.63E-54 | -1.69E-46 |
MS.gene053184 | MS.gene73273 | 0.800243 | 1.58E-48 | -1.69E-46 |
MS.gene053184 | MS.gene73745 | 0.812917 | 3.33E-51 | -1.69E-46 |
MS.gene053184 | MS.gene74587 | 0.804683 | 1.92E-49 | -1.69E-46 |
MS.gene053184 | MS.gene74741 | 0.804182 | 2.44E-49 | -1.69E-46 |
MS.gene053184 | MS.gene74971 | 0.801607 | 8.31E-49 | -1.69E-46 |
MS.gene053184 | MS.gene75321 | 0.80824 | 3.41E-50 | -1.69E-46 |
MS.gene053184 | MS.gene76226 | 0.804334 | 2.27E-49 | -1.69E-46 |
MS.gene053184 | MS.gene76554 | 0.804993 | 1.65E-49 | -1.69E-46 |
MS.gene053184 | MS.gene78247 | 0.813522 | 2.45E-51 | -1.69E-46 |
MS.gene053184 | MS.gene80025 | 0.800749 | 1.25E-48 | -1.69E-46 |
MS.gene053184 | MS.gene80273 | 0.809091 | 2.25E-50 | -1.69E-46 |
MS.gene053184 | MS.gene81998 | 0.802907 | 4.49E-49 | -1.69E-46 |
MS.gene053184 | MS.gene82810 | 0.802315 | 5.95E-49 | -1.69E-46 |
MS.gene053184 | MS.gene84086 | 0.833709 | 4.56E-56 | -1.69E-46 |
MS.gene053184 | MS.gene84326 | 0.847797 | 9.21E-60 | -1.69E-46 |
MS.gene053184 | MS.gene84396 | 0.801135 | 1.04E-48 | -1.69E-46 |
MS.gene053184 | MS.gene84833 | 0.806396 | 8.40E-50 | -1.69E-46 |
MS.gene053184 | MS.gene86055 | 0.831763 | 1.39E-55 | -1.69E-46 |
MS.gene053184 | MS.gene87264 | 0.832988 | 6.90E-56 | -1.69E-46 |
MS.gene053184 | MS.gene87430 | 0.803088 | 4.12E-49 | -1.69E-46 |
MS.gene053184 | MS.gene87804 | 0.806163 | 9.40E-50 | -1.69E-46 |
MS.gene053184 | MS.gene87897 | 0.829819 | 4.16E-55 | -1.69E-46 |
MS.gene053184 | MS.gene87987 | 0.821537 | 3.83E-53 | -1.69E-46 |
MS.gene053184 | MS.gene88788 | 0.839268 | 1.75E-57 | -1.69E-46 |
MS.gene053184 | MS.gene88960 | 0.809 | 2.35E-50 | -1.69E-46 |
MS.gene053184 | MS.gene91509 | 0.803278 | 3.76E-49 | -1.69E-46 |
MS.gene053184 | MS.gene91645 | 0.802019 | 6.84E-49 | -1.69E-46 |
MS.gene053184 | MS.gene91762 | 0.802992 | 4.31E-49 | -1.69E-46 |
MS.gene053184 | MS.gene91807 | 0.827933 | 1.19E-54 | -1.69E-46 |
MS.gene053184 | MS.gene91809 | 0.826058 | 3.34E-54 | -1.69E-46 |
MS.gene053184 | MS.gene92548 | 0.809488 | 1.85E-50 | -1.69E-46 |
MS.gene053184 | MS.gene92590 | 0.810842 | 9.43E-51 | -1.69E-46 |
MS.gene053184 | MS.gene93887 | 0.810522 | 1.11E-50 | -1.69E-46 |
MS.gene053184 | MS.gene93888 | 0.818189 | 2.23E-52 | -1.69E-46 |
MS.gene053184 | MS.gene93890 | 0.81171 | 6.11E-51 | -1.69E-46 |
MS.gene053184 | MS.gene93892 | 0.815698 | 8.09E-52 | -1.69E-46 |
MS.gene053184 | MS.gene96371 | 0.812736 | 3.65E-51 | -1.69E-46 |
MS.gene053184 | MS.gene96503 | 0.822571 | 2.21E-53 | -1.69E-46 |
MS.gene053184 | MS.gene96507 | 0.802388 | 5.75E-49 | -1.69E-46 |
MS.gene053184 | MS.gene98543 | 0.801368 | 9.30E-49 | -1.69E-46 |
MS.gene053184 | MS.gene99375 | 0.801884 | 7.30E-49 | -1.69E-46 |
MS.gene053184 | MS.gene99735 | 0.815865 | 7.43E-52 | -1.69E-46 |
MS.gene053184 | MS.gene99802 | 0.818899 | 1.54E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053184.t1 | MTR_4g007550 | 81.203 | 133 | 16 | 3 | 1 | 128 | 1 | 129 | 1.42e-62 | 187 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 16 sgRNAs with CRISPR-Local
Find 21 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTAAGATGTAGGAAACTA+TGG | 0.353441 | 4.2:+92236623 | MS.gene053184:intron |
GCTCTACATCCAAGTTATCT+TGG | 0.366777 | 4.2:+92236801 | MS.gene053184:CDS |
ATTAAGAAAGCTAGAGGAAA+AGG | 0.431070 | 4.2:+92236728 | MS.gene053184:CDS |
GCTAGAGGAAAAGGAGCTAA+AGG | 0.517100 | 4.2:+92236737 | MS.gene053184:CDS |
GAAGAATGCTTACTACTAGT+AGG | 0.521612 | 4.2:-92236515 | None:intergenic |
AGGTGAAATCCAAGATAACT+TGG | 0.531170 | 4.2:-92236810 | None:intergenic |
AACTATGGAAGCATAAAAGA+AGG | 0.547768 | 4.2:+92236638 | MS.gene053184:CDS |
AGAAGATAAGAAACATATCA+AGG | 0.562331 | 4.2:+92236676 | MS.gene053184:CDS |
TCATAGCAACTTAACATGAA+AGG | 0.582658 | 4.2:-92236867 | None:intergenic |
GACTCGATTAAGAAAGCTAG+AGG | 0.596569 | 4.2:+92236722 | MS.gene053184:CDS |
AAACTCGTCAAATAGCATCA+TGG | 0.602558 | 4.2:+92236481 | MS.gene053184:CDS |
AAAACAAAGCTTACACACAC+AGG | 0.629592 | 4.2:-92236830 | None:intergenic |
AAAGAAGGAAGCAAGTTGCA+CGG | 0.651204 | 4.2:+92236653 | MS.gene053184:CDS |
AGAGGAAAAGGAGCTAAAGG+TGG | 0.683202 | 4.2:+92236740 | MS.gene053184:CDS |
AGATAAGAAACATATCAAGG+AGG | 0.727302 | 4.2:+92236679 | MS.gene053184:CDS |
GTAGAGCTTCGAGAACGACG+AGG | 0.744495 | 4.2:-92236785 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AGAAGATAAGAAACATATCA+AGG | + | chr4.2:92236676-92236695 | MS.gene053184:CDS | 25.0% |
! | TATAGCATGAGTACAATTTA+AGG | - | chr4.2:92236561-92236580 | None:intergenic | 25.0% |
! | TATTAAGATGTAGGAAACTA+TGG | + | chr4.2:92236623-92236642 | MS.gene053184:intron | 25.0% |
! | TGCTTATTCTATTAAGATGT+AGG | + | chr4.2:92236614-92236633 | MS.gene053184:intron | 25.0% |
AGATAAGAAACATATCAAGG+AGG | + | chr4.2:92236679-92236698 | MS.gene053184:CDS | 30.0% | |
ATTAAGAAAGCTAGAGGAAA+AGG | + | chr4.2:92236728-92236747 | MS.gene053184:CDS | 30.0% | |
TCATAGCAACTTAACATGAA+AGG | - | chr4.2:92236870-92236889 | None:intergenic | 30.0% | |
! | AACTATGGAAGCATAAAAGA+AGG | + | chr4.2:92236638-92236657 | MS.gene053184:CDS | 30.0% |
!!! | ACTCAAGCTATATCGATTTT+AGG | + | chr4.2:92236434-92236453 | MS.gene053184:CDS | 30.0% |
AAAACAAAGCTTACACACAC+AGG | - | chr4.2:92236833-92236852 | None:intergenic | 35.0% | |
AAACTCGTCAAATAGCATCA+TGG | + | chr4.2:92236481-92236500 | MS.gene053184:CDS | 35.0% | |
AGGTGAAATCCAAGATAACT+TGG | - | chr4.2:92236813-92236832 | None:intergenic | 35.0% | |
GAAGAATGCTTACTACTAGT+AGG | - | chr4.2:92236518-92236537 | None:intergenic | 35.0% | |
AAAGAAGGAAGCAAGTTGCA+CGG | + | chr4.2:92236653-92236672 | MS.gene053184:CDS | 40.0% | |
GACTCGATTAAGAAAGCTAG+AGG | + | chr4.2:92236722-92236741 | MS.gene053184:CDS | 40.0% | |
GCTCTACATCCAAGTTATCT+TGG | + | chr4.2:92236801-92236820 | MS.gene053184:CDS | 40.0% | |
AAGGAAACGCTCCTTCAGAA+AGG | - | chr4.2:92236542-92236561 | None:intergenic | 45.0% | |
AGAGGAAAAGGAGCTAAAGG+TGG | + | chr4.2:92236740-92236759 | MS.gene053184:CDS | 45.0% | |
AGCATTCTTCGCCTTTCTGA+AGG | + | chr4.2:92236528-92236547 | MS.gene053184:intron | 45.0% | |
GCTAGAGGAAAAGGAGCTAA+AGG | + | chr4.2:92236737-92236756 | MS.gene053184:CDS | 45.0% | |
GTAGAGCTTCGAGAACGACG+AGG | - | chr4.2:92236788-92236807 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 92236392 | 92236889 | 92236392 | ID=MS.gene053184 |
chr4.2 | mRNA | 92236392 | 92236889 | 92236392 | ID=MS.gene053184.t1;Parent=MS.gene053184 |
chr4.2 | exon | 92236392 | 92236524 | 92236392 | ID=MS.gene053184.t1.exon1;Parent=MS.gene053184.t1 |
chr4.2 | CDS | 92236392 | 92236524 | 92236392 | ID=cds.MS.gene053184.t1;Parent=MS.gene053184.t1 |
chr4.2 | exon | 92236636 | 92236889 | 92236636 | ID=MS.gene053184.t1.exon2;Parent=MS.gene053184.t1 |
chr4.2 | CDS | 92236636 | 92236889 | 92236636 | ID=cds.MS.gene053184.t1;Parent=MS.gene053184.t1 |
Gene Sequence |
Protein sequence |