Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071490.t1 | XP_013450083.1 | 92.9 | 268 | 13 | 1 | 1 | 268 | 1 | 262 | 1.70E-139 | 505.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071490.t1 | O94336 | 28.0 | 200 | 117 | 8 | 49 | 237 | 23 | 206 | 9.9e-08 | 58.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071490.t1 | I3T4K4 | 92.9 | 268 | 13 | 1 | 1 | 268 | 1 | 262 | 1.2e-139 | 505.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049711 | MS.gene071490 | 0.808875 | 2.50E-50 | -1.69E-46 |
| MS.gene051018 | MS.gene071490 | 0.832079 | 1.16E-55 | -1.69E-46 |
| MS.gene051247 | MS.gene071490 | 0.805984 | 1.02E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene071490 | 0.810449 | 1.15E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene071490 | 0.816446 | 5.51E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene071490 | 0.801707 | 7.93E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071490.t1 | MTR_7g103560 | 94.030 | 268 | 10 | 1 | 1 | 268 | 1 | 262 | 0.0 | 511 |
| MS.gene071490.t1 | MTR_7g103570 | 83.333 | 252 | 41 | 1 | 13 | 264 | 1 | 251 | 3.57e-154 | 430 |
| MS.gene071490.t1 | MTR_7g103570 | 84.530 | 181 | 28 | 0 | 13 | 193 | 1 | 181 | 7.65e-111 | 319 |
| MS.gene071490.t1 | MTR_7g103410 | 62.214 | 262 | 75 | 5 | 1 | 260 | 1 | 240 | 2.29e-103 | 301 |
| MS.gene071490.t1 | MTR_7g015170 | 40.426 | 235 | 127 | 4 | 39 | 266 | 32 | 260 | 7.01e-57 | 183 |
| MS.gene071490.t1 | MTR_7g015130 | 39.834 | 241 | 137 | 3 | 33 | 266 | 28 | 267 | 1.43e-56 | 182 |
| MS.gene071490.t1 | MTR_7g015150 | 40.870 | 230 | 122 | 4 | 39 | 260 | 54 | 277 | 1.80e-55 | 181 |
| MS.gene071490.t1 | MTR_7g015180 | 40.179 | 224 | 123 | 4 | 48 | 266 | 49 | 266 | 2.52e-54 | 177 |
| MS.gene071490.t1 | MTR_7g015130 | 40.625 | 224 | 123 | 4 | 51 | 266 | 11 | 232 | 5.70e-54 | 175 |
| MS.gene071490.t1 | MTR_2g060670 | 39.381 | 226 | 129 | 3 | 48 | 268 | 492 | 714 | 3.83e-49 | 172 |
| MS.gene071490.t1 | MTR_7g015190 | 37.302 | 252 | 144 | 5 | 18 | 264 | 61 | 303 | 4.58e-48 | 162 |
| MS.gene071490.t1 | MTR_7g015190 | 38.559 | 236 | 131 | 5 | 34 | 264 | 111 | 337 | 1.50e-46 | 159 |
| MS.gene071490.t1 | MTR_7g015130 | 40.415 | 193 | 107 | 3 | 33 | 218 | 28 | 219 | 4.80e-43 | 146 |
| MS.gene071490.t1 | MTR_7g015130 | 40.741 | 189 | 104 | 3 | 33 | 214 | 28 | 215 | 7.93e-43 | 145 |
| MS.gene071490.t1 | MTR_7g015190 | 32.836 | 268 | 150 | 7 | 18 | 264 | 61 | 319 | 3.90e-37 | 134 |
| MS.gene071490.t1 | MTR_7g015190 | 32.714 | 269 | 150 | 8 | 18 | 264 | 61 | 320 | 9.36e-37 | 132 |
| MS.gene071490.t1 | MTR_2g060670 | 41.509 | 159 | 85 | 3 | 48 | 201 | 492 | 647 | 1.35e-34 | 132 |
| MS.gene071490.t1 | MTR_7g103550 | 82.927 | 41 | 7 | 0 | 215 | 255 | 6 | 46 | 1.06e-19 | 80.5 |
| MS.gene071490.t1 | MTR_7g103540 | 65.957 | 47 | 16 | 0 | 214 | 260 | 67 | 113 | 1.06e-18 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071490.t1 | AT2G36540 | 48.462 | 260 | 111 | 6 | 14 | 265 | 5 | 249 | 1.19e-65 | 205 |
| MS.gene071490.t1 | AT3G29760 | 41.500 | 200 | 107 | 3 | 66 | 260 | 321 | 515 | 7.06e-46 | 161 |
| MS.gene071490.t1 | AT3G29760 | 41.500 | 200 | 107 | 3 | 66 | 260 | 321 | 515 | 7.06e-46 | 161 |
| MS.gene071490.t1 | AT2G36550 | 51.145 | 131 | 60 | 2 | 135 | 265 | 15 | 141 | 8.53e-44 | 145 |
| MS.gene071490.t1 | AT4G26190 | 38.710 | 217 | 121 | 5 | 49 | 260 | 843 | 1052 | 1.50e-42 | 155 |
| MS.gene071490.t1 | AT4G26190 | 38.710 | 217 | 121 | 5 | 49 | 260 | 843 | 1052 | 1.50e-42 | 155 |
| MS.gene071490.t1 | AT4G26190 | 38.710 | 217 | 121 | 5 | 49 | 260 | 843 | 1052 | 1.50e-42 | 155 |
| MS.gene071490.t1 | AT4G26190 | 38.710 | 217 | 121 | 5 | 49 | 260 | 843 | 1052 | 1.50e-42 | 155 |
| MS.gene071490.t1 | AT4G26190 | 38.710 | 217 | 121 | 5 | 49 | 260 | 843 | 1052 | 1.50e-42 | 155 |
| MS.gene071490.t1 | AT3G29760 | 36.726 | 226 | 107 | 4 | 66 | 260 | 321 | 541 | 2.23e-40 | 147 |
| MS.gene071490.t1 | AT3G29760 | 42.105 | 133 | 68 | 2 | 66 | 193 | 321 | 449 | 8.84e-28 | 111 |
| MS.gene071490.t1 | AT3G29760 | 43.836 | 73 | 37 | 1 | 66 | 138 | 321 | 389 | 1.58e-12 | 67.4 |
Find 52 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATAAATTCTTCACTAAA+TGG | 0.185254 | 7.3:-10585369 | None:intergenic |
| CTCAATTGTTAGCAGTTATA+CGG | 0.218202 | 7.3:-10586429 | None:intergenic |
| AAAACAAGCTACTATTTGTT+TGG | 0.265573 | 7.3:+10585751 | MS.gene071490:CDS |
| ATAATAAGCAATTTCTTCTT+AGG | 0.282304 | 7.3:-10585133 | None:intergenic |
| ACAAGTGAATTACCGGATTA+AGG | 0.285626 | 7.3:-10586033 | None:intergenic |
| CAAGGTAAATGTAGAGATTC+TGG | 0.299926 | 7.3:+10585875 | MS.gene071490:CDS |
| TTGCTTATTATGAACCTTAA+CGG | 0.337126 | 7.3:+10585145 | MS.gene071490:CDS |
| TCAAGAGAAAGACCCAATTC+TGG | 0.351025 | 7.3:-10585094 | None:intergenic |
| AAACAAGCTACTATTTGTTT+GGG | 0.367088 | 7.3:+10585752 | MS.gene071490:CDS |
| GGTGCTTTAGCCTGTGCTAT+TGG | 0.376162 | 7.3:+10585720 | MS.gene071490:CDS |
| AGATTCTGGCTTTAAATCCT+TGG | 0.379049 | 7.3:+10585889 | MS.gene071490:CDS |
| AAGTTCAGCAGAACCAGAAT+TGG | 0.383508 | 7.3:+10585081 | MS.gene071490:CDS |
| TGTCAGTGACACGAGCTCTA+TGG | 0.392097 | 7.3:-10585177 | None:intergenic |
| TAATCAGCGGTCCGAGACTT+TGG | 0.398239 | 7.3:-10585211 | None:intergenic |
| TACTTGCATATGTCACCATT+TGG | 0.400960 | 7.3:-10586289 | None:intergenic |
| AAAGTATTTGAAGCAGAATA+TGG | 0.421185 | 7.3:-10585980 | None:intergenic |
| GGAACGAACACGAGAATAGA+AGG | 0.423928 | 7.3:-10586407 | None:intergenic |
| ATACATTTAATTTAGGATCA+AGG | 0.424490 | 7.3:+10585857 | MS.gene071490:intron |
| AAAGATTTGAAGTGGGTGTC+TGG | 0.432400 | 7.3:+10585403 | MS.gene071490:CDS |
| GGATGAGATGTTGTAATTGC+TGG | 0.437119 | 7.3:-10586376 | None:intergenic |
| ATACAAGTCTTTCCTTAATC+CGG | 0.442145 | 7.3:+10586021 | MS.gene071490:CDS |
| TTACAACATCTCATCCTGAT+TGG | 0.449737 | 7.3:+10586383 | MS.gene071490:CDS |
| GCCTTGTCATCCTTGTCCTC+AGG | 0.462508 | 7.3:-10586163 | None:intergenic |
| CGAGAATAGAAGGCCCAATC+AGG | 0.463741 | 7.3:-10586397 | None:intergenic |
| TACAACATCTCATCCTGATT+GGG | 0.472152 | 7.3:+10586384 | MS.gene071490:CDS |
| GGATTAAGGAAAGACTTGTA+TGG | 0.503951 | 7.3:-10586019 | None:intergenic |
| TATGGAGAAGAAATCCGTTA+AGG | 0.508168 | 7.3:-10585159 | None:intergenic |
| CTGCTTAGAAAGATTTGAAG+TGG | 0.511785 | 7.3:+10585395 | MS.gene071490:CDS |
| ATAATTTGAATAGATCCAAA+TGG | 0.511910 | 7.3:+10586274 | MS.gene071490:intron |
| GGGTGTCTGGTCTTCTGCAA+TGG | 0.513381 | 7.3:+10585416 | MS.gene071490:CDS |
| AGTTCAGCAGAACCAGAATT+GGG | 0.514991 | 7.3:+10585082 | MS.gene071490:CDS |
| TTTCGAATCGCCAATAGCAC+AGG | 0.520821 | 7.3:-10585730 | None:intergenic |
| AAATGCAGGCATAATGTTGA+TGG | 0.521362 | 7.3:+10585699 | MS.gene071490:intron |
| TCAATTGTTAGCAGTTATAC+GGG | 0.521458 | 7.3:-10586428 | None:intergenic |
| TCTCTTGAGAAGCTGAATCT+CGG | 0.522455 | 7.3:+10585109 | MS.gene071490:CDS |
| GTGTGGAATACTGTCAAGAA+AGG | 0.534546 | 7.3:+10585953 | MS.gene071490:CDS |
| TGCTTAGAAAGATTTGAAGT+GGG | 0.535088 | 7.3:+10585396 | MS.gene071490:CDS |
| GGACAAGGATGACAAGGCAC+TGG | 0.535550 | 7.3:+10586168 | MS.gene071490:CDS |
| TACGTGAAGGATAATGCTAT+TGG | 0.543370 | 7.3:+10586349 | MS.gene071490:CDS |
| TCCTCAGGATCATATGACTT+AGG | 0.553713 | 7.3:-10586148 | None:intergenic |
| AGAAAGCAATTCCAAAGTCT+CGG | 0.562617 | 7.3:+10585200 | MS.gene071490:CDS |
| TCCTAAGTCATATGATCCTG+AGG | 0.564715 | 7.3:+10586147 | MS.gene071490:CDS |
| GACATATGCAAGTACTTGAA+AGG | 0.564755 | 7.3:+10586298 | MS.gene071490:CDS |
| AGGCTTCTTATTGTTCTCCA+AGG | 0.569260 | 7.3:-10585906 | None:intergenic |
| GTCATATGATCCTGAGGACA+AGG | 0.573937 | 7.3:+10586153 | MS.gene071490:CDS |
| GACAAGGATGACAAGGCACT+GGG | 0.585950 | 7.3:+10586169 | MS.gene071490:CDS |
| ATTATGTTACAGTTTACAAG+AGG | 0.597781 | 7.3:+10585346 | MS.gene071490:intron |
| TCCTGAGGACAAGGATGACA+AGG | 0.614403 | 7.3:+10586162 | MS.gene071490:CDS |
| AGATGTTCAGTCCTACGTGA+AGG | 0.642319 | 7.3:+10586336 | MS.gene071490:CDS |
| TGGAATACTGTCAAGAAAGG+AGG | 0.665630 | 7.3:+10585956 | MS.gene071490:CDS |
| GTGACGATATTTGTAATCAG+CGG | 0.676232 | 7.3:-10585224 | None:intergenic |
| AATAGCATTATCCTTCACGT+AGG | 0.725400 | 7.3:-10586347 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTTAAAAAGAAAATAA+GGG | - | chr7.3:10585638-10585657 | None:intergenic | 10.0% |
| !! | TCAAATTTAAAAAGAAAATA+AGG | - | chr7.3:10585639-10585658 | None:intergenic | 10.0% |
| !!! | TCATTTTCTTAAATTATTAT+CGG | - | chr7.3:10585504-10585523 | None:intergenic | 10.0% |
| !!! | ATTTTATTTTTCTAGAGATT+TGG | + | chr7.3:10586212-10586231 | MS.gene071490:intron | 15.0% |
| !!! | TCTCTAGAAAAATAAAATAT+AGG | - | chr7.3:10586210-10586229 | None:intergenic | 15.0% |
| !!! | TTGTTTCATACATTTAATTT+AGG | + | chr7.3:10585850-10585869 | MS.gene071490:intron | 15.0% |
| !! | AGGAAAAATAATTGATGTAT+TGG | - | chr7.3:10586131-10586150 | None:intergenic | 20.0% |
| !! | ATAATAAGCAATTTCTTCTT+AGG | - | chr7.3:10585136-10585155 | None:intergenic | 20.0% |
| !! | ATAATTTGAATAGATCCAAA+TGG | + | chr7.3:10586274-10586293 | MS.gene071490:intron | 20.0% |
| !! | ATGAATTCAGTTGTAATTAT+AGG | + | chr7.3:10585520-10585539 | MS.gene071490:intron | 20.0% |
| !! | GGAAAAATAATTGATGTATT+GGG | - | chr7.3:10586130-10586149 | None:intergenic | 20.0% |
| !! | TATATGTGAGAAACTTATTA+CGG | - | chr7.3:10585255-10585274 | None:intergenic | 20.0% |
| !! | TTCATAAATTCTTCACTAAA+TGG | - | chr7.3:10585372-10585391 | None:intergenic | 20.0% |
| !!! | ACATATCAAGAAATGATTTT+AGG | - | chr7.3:10585805-10585824 | None:intergenic | 20.0% |
| !!! | ATACATTTAATTTAGGATCA+AGG | + | chr7.3:10585857-10585876 | MS.gene071490:intron | 20.0% |
| ! | AAAAAAGAGAGTTGTAGTTA+TGG | + | chr7.3:10585004-10585023 | MS.gene071490:CDS | 25.0% |
| ! | AAAACAAGCTACTATTTGTT+TGG | + | chr7.3:10585751-10585770 | MS.gene071490:CDS | 25.0% |
| ! | AAACAAGCTACTATTTGTTT+GGG | + | chr7.3:10585752-10585771 | MS.gene071490:CDS | 25.0% |
| ! | AAGAAAAACAAGTGAATTAC+CGG | - | chr7.3:10586043-10586062 | None:intergenic | 25.0% |
| ! | ATTATGTTACAGTTTACAAG+AGG | + | chr7.3:10585346-10585365 | MS.gene071490:intron | 25.0% |
| ! | TCTTAAATTATTATCGGTGT+CGG | - | chr7.3:10585498-10585517 | None:intergenic | 25.0% |
| ! | TTGCTTATTATGAACCTTAA+CGG | + | chr7.3:10585145-10585164 | MS.gene071490:CDS | 25.0% |
| !! | AAAGTATTTGAAGCAGAATA+TGG | - | chr7.3:10585983-10586002 | None:intergenic | 25.0% |
| ATACAAGTCTTTCCTTAATC+CGG | + | chr7.3:10586021-10586040 | MS.gene071490:CDS | 30.0% | |
| TCAAAGAACTGAAAAAAGTG+TGG | + | chr7.3:10585936-10585955 | MS.gene071490:CDS | 30.0% | |
| TCAATTGTTAGCAGTTATAC+GGG | - | chr7.3:10586431-10586450 | None:intergenic | 30.0% | |
| TCAGTTGTAATTATAGGTGT+CGG | + | chr7.3:10585526-10585545 | MS.gene071490:intron | 30.0% | |
| ! | CTGCATTTAGAGTAACAAAA+GGG | - | chr7.3:10585687-10585706 | None:intergenic | 30.0% |
| ! | TGCTTAGAAAGATTTGAAGT+GGG | + | chr7.3:10585396-10585415 | MS.gene071490:CDS | 30.0% |
| ! | TTCAGTTCTTTGAAAAAGAG+AGG | - | chr7.3:10585929-10585948 | None:intergenic | 30.0% |
| AAATGCAGGCATAATGTTGA+TGG | + | chr7.3:10585699-10585718 | MS.gene071490:intron | 35.0% | |
| AATAGCATTATCCTTCACGT+AGG | - | chr7.3:10586350-10586369 | None:intergenic | 35.0% | |
| ACAAGTGAATTACCGGATTA+AGG | - | chr7.3:10586036-10586055 | None:intergenic | 35.0% | |
| AGAAAGCAATTCCAAAGTCT+CGG | + | chr7.3:10585200-10585219 | MS.gene071490:CDS | 35.0% | |
| AGCTACTATTTGTTTGGGTA+CGG | + | chr7.3:10585757-10585776 | MS.gene071490:intron | 35.0% | |
| CAAGGTAAATGTAGAGATTC+TGG | + | chr7.3:10585875-10585894 | MS.gene071490:CDS | 35.0% | |
| CTGCTTAGAAAGATTTGAAG+TGG | + | chr7.3:10585395-10585414 | MS.gene071490:CDS | 35.0% | |
| GACATATGCAAGTACTTGAA+AGG | + | chr7.3:10586298-10586317 | MS.gene071490:CDS | 35.0% | |
| GGATTAAGGAAAGACTTGTA+TGG | - | chr7.3:10586022-10586041 | None:intergenic | 35.0% | |
| GTGACGATATTTGTAATCAG+CGG | - | chr7.3:10585227-10585246 | None:intergenic | 35.0% | |
| TACAACATCTCATCCTGATT+GGG | + | chr7.3:10586384-10586403 | MS.gene071490:CDS | 35.0% | |
| TACGTGAAGGATAATGCTAT+TGG | + | chr7.3:10586349-10586368 | MS.gene071490:CDS | 35.0% | |
| TACTTGCATATGTCACCATT+TGG | - | chr7.3:10586292-10586311 | None:intergenic | 35.0% | |
| TATGGAGAAGAAATCCGTTA+AGG | - | chr7.3:10585162-10585181 | None:intergenic | 35.0% | |
| TTACAACATCTCATCCTGAT+TGG | + | chr7.3:10586383-10586402 | MS.gene071490:CDS | 35.0% | |
| ! | CCTGCATTTAGAGTAACAAA+AGG | - | chr7.3:10585688-10585707 | None:intergenic | 35.0% |
| ! | CCTTTTGTTACTCTAAATGC+AGG | + | chr7.3:10585685-10585704 | MS.gene071490:intron | 35.0% |
| ! | CTGAACTTTTGTGATCATCA+TGG | - | chr7.3:10585069-10585088 | None:intergenic | 35.0% |
| !! | AGATTCTGGCTTTAAATCCT+TGG | + | chr7.3:10585889-10585908 | MS.gene071490:CDS | 35.0% |
| AACACTCTTCCTATGAAGCA+CGG | + | chr7.3:10585450-10585469 | MS.gene071490:intron | 40.0% | |
| AAGTTCAGCAGAACCAGAAT+TGG | + | chr7.3:10585081-10585100 | MS.gene071490:CDS | 40.0% | |
| AGGCTTCTTATTGTTCTCCA+AGG | - | chr7.3:10585909-10585928 | None:intergenic | 40.0% | |
| AGTTCAGCAGAACCAGAATT+GGG | + | chr7.3:10585082-10585101 | MS.gene071490:CDS | 40.0% | |
| ATGTATTGGGCTGCAATTTG+AGG | - | chr7.3:10586117-10586136 | None:intergenic | 40.0% | |
| GGATGAGATGTTGTAATTGC+TGG | - | chr7.3:10586379-10586398 | None:intergenic | 40.0% | |
| GTGTGGAATACTGTCAAGAA+AGG | + | chr7.3:10585953-10585972 | MS.gene071490:CDS | 40.0% | |
| TCAAGAGAAAGACCCAATTC+TGG | - | chr7.3:10585097-10585116 | None:intergenic | 40.0% | |
| TCCTAAGTCATATGATCCTG+AGG | + | chr7.3:10586147-10586166 | MS.gene071490:CDS | 40.0% | |
| TCCTCAGGATCATATGACTT+AGG | - | chr7.3:10586151-10586170 | None:intergenic | 40.0% | |
| TCTCTTGAGAAGCTGAATCT+CGG | + | chr7.3:10585109-10585128 | MS.gene071490:CDS | 40.0% | |
| TGGAATACTGTCAAGAAAGG+AGG | + | chr7.3:10585956-10585975 | MS.gene071490:CDS | 40.0% | |
| ! | AAAGATTTGAAGTGGGTGTC+TGG | + | chr7.3:10585403-10585422 | MS.gene071490:CDS | 40.0% |
| AGATGTTCAGTCCTACGTGA+AGG | + | chr7.3:10586336-10586355 | MS.gene071490:CDS | 45.0% | |
| GGAACGAACACGAGAATAGA+AGG | - | chr7.3:10586410-10586429 | None:intergenic | 45.0% | |
| GTCATATGATCCTGAGGACA+AGG | + | chr7.3:10586153-10586172 | MS.gene071490:CDS | 45.0% | |
| TATGAAGCACGAACACTCCT+CGG | - | chr7.3:10585588-10585607 | None:intergenic | 45.0% | |
| TTTCGAATCGCCAATAGCAC+AGG | - | chr7.3:10585733-10585752 | None:intergenic | 45.0% | |
| CGAGAATAGAAGGCCCAATC+AGG | - | chr7.3:10586400-10586419 | None:intergenic | 50.0% | |
| GATTAGGTATGTCCCGGTGT+CGG | - | chr7.3:10585566-10585585 | None:intergenic | 50.0% | |
| GGTGCTTTAGCCTGTGCTAT+TGG | + | chr7.3:10585720-10585739 | MS.gene071490:CDS | 50.0% | |
| TAATCAGCGGTCCGAGACTT+TGG | - | chr7.3:10585214-10585233 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACGACA+CGG | + | chr7.3:10585461-10585480 | MS.gene071490:intron | 50.0% | |
| TCCTGAGGACAAGGATGACA+AGG | + | chr7.3:10586162-10586181 | MS.gene071490:CDS | 50.0% | |
| TGTCAGTGACACGAGCTCTA+TGG | - | chr7.3:10585180-10585199 | None:intergenic | 50.0% | |
| ! | GACAAGGATGACAAGGCACT+GGG | + | chr7.3:10586169-10586188 | MS.gene071490:CDS | 50.0% |
| ! | TCCTCGGATTAGGTATGTCC+CGG | - | chr7.3:10585572-10585591 | None:intergenic | 50.0% |
| !! | TATTATCGGTGTCGGCGTGT+GGG | - | chr7.3:10585490-10585509 | None:intergenic | 50.0% |
| !! | TTATTATCGGTGTCGGCGTG+TGG | - | chr7.3:10585491-10585510 | None:intergenic | 50.0% |
| ACCGGGACATACCTAATCCG+AGG | + | chr7.3:10585568-10585587 | MS.gene071490:intron | 55.0% | |
| GCACGAACACTCCTCGGATT+AGG | - | chr7.3:10585582-10585601 | None:intergenic | 55.0% | |
| GCCTTGTCATCCTTGTCCTC+AGG | - | chr7.3:10586166-10586185 | None:intergenic | 55.0% | |
| GGACAAGGATGACAAGGCAC+TGG | + | chr7.3:10586168-10586187 | MS.gene071490:CDS | 55.0% | |
| GTGTCGTGTCCGTGCTTCAT+AGG | - | chr7.3:10585462-10585481 | None:intergenic | 55.0% | |
| ! | GGGTGTCTGGTCTTCTGCAA+TGG | + | chr7.3:10585416-10585435 | MS.gene071490:CDS | 55.0% |
| ! | TCCCGGTGTCGGATACGAGT+CGG | - | chr7.3:10585555-10585574 | None:intergenic | 60.0% |
| !! | ACCGACTCGTATCCGACACC+GGG | + | chr7.3:10585551-10585570 | MS.gene071490:intron | 60.0% |
| !! | CACCGACTCGTATCCGACAC+CGG | + | chr7.3:10585550-10585569 | MS.gene071490:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 10584995 | 10586450 | 10584995 | ID=MS.gene071490 |
| chr7.3 | mRNA | 10584995 | 10586450 | 10584995 | ID=MS.gene071490.t1;Parent=MS.gene071490 |
| chr7.3 | exon | 10584995 | 10585253 | 10584995 | ID=MS.gene071490.t1.exon1;Parent=MS.gene071490.t1 |
| chr7.3 | CDS | 10584995 | 10585253 | 10584995 | ID=cds.MS.gene071490.t1;Parent=MS.gene071490.t1 |
| chr7.3 | exon | 10585358 | 10585439 | 10585358 | ID=MS.gene071490.t1.exon2;Parent=MS.gene071490.t1 |
| chr7.3 | CDS | 10585358 | 10585439 | 10585358 | ID=cds.MS.gene071490.t1;Parent=MS.gene071490.t1 |
| chr7.3 | exon | 10585707 | 10585773 | 10585707 | ID=MS.gene071490.t1.exon3;Parent=MS.gene071490.t1 |
| chr7.3 | CDS | 10585707 | 10585773 | 10585707 | ID=cds.MS.gene071490.t1;Parent=MS.gene071490.t1 |
| chr7.3 | exon | 10585872 | 10586042 | 10585872 | ID=MS.gene071490.t1.exon4;Parent=MS.gene071490.t1 |
| chr7.3 | CDS | 10585872 | 10586042 | 10585872 | ID=cds.MS.gene071490.t1;Parent=MS.gene071490.t1 |
| chr7.3 | exon | 10586127 | 10586190 | 10586127 | ID=MS.gene071490.t1.exon5;Parent=MS.gene071490.t1 |
| chr7.3 | CDS | 10586127 | 10586190 | 10586127 | ID=cds.MS.gene071490.t1;Parent=MS.gene071490.t1 |
| chr7.3 | exon | 10586287 | 10586450 | 10586287 | ID=MS.gene071490.t1.exon6;Parent=MS.gene071490.t1 |
| chr7.3 | CDS | 10586287 | 10586450 | 10586287 | ID=cds.MS.gene071490.t1;Parent=MS.gene071490.t1 |
| Gene Sequence |
| Protein sequence |
