AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071562

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071562.t1 MTR_2g096180 98.992 595 6 0 1 595 7 601 0.0 1188
MS.gene071562.t1 MTR_2g096180 93.049 633 6 1 1 595 7 639 0.0 1170
MS.gene071562.t1 MTR_2g096180 98.913 552 6 0 44 595 1 552 0.0 1107
MS.gene071562.t1 MTR_2g096180 92.542 590 6 1 44 595 1 590 0.0 1088
MS.gene071562.t1 MTR_4g061843 74.646 635 118 8 1 595 7 638 0.0 825
MS.gene071562.t1 MTR_4g061843 70.347 634 114 9 1 595 7 605 0.0 753
MS.gene071562.t1 MTR_4g061843 74.055 582 109 7 53 595 1 579 0.0 744
MS.gene071562.t1 MTR_4g061843 75.042 589 103 9 1 548 7 592 0.0 736
MS.gene071562.t1 MTR_4g061960 78.594 313 63 4 285 595 4 314 1.16e-161 465
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071562.t1 AT1G07705 70.978 603 150 10 1 595 7 592 0.0 785
MS.gene071562.t1 AT1G07705 71.171 555 137 9 1 547 7 546 0.0 700
MS.gene071562.t1 AT5G59710 61.006 636 161 14 1 595 6 595 0.0 663
MS.gene071562.t1 AT5G59710 61.006 636 161 14 1 595 6 595 0.0 663
MS.gene071562.t1 AT5G59710 61.290 589 143 13 1 548 6 550 0.0 594

Find 155 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCATTAAGTTGTTCTTTC+TGG 0.035131 2.3:+25520020 None:intergenic
GGACCTGCATTTCCCAAAAT+TGG 0.156530 2.3:+25521529 None:intergenic
AATTCTCCAAATACTGTTTC+TGG 0.167736 2.3:-25519470 MS.gene071562:CDS
ATTGGGAGTATCCCCAATTT+TGG 0.178580 2.3:-25521542 MS.gene071562:CDS
ACACCAGTGTGCTGATAAAT+TGG 0.188660 2.3:+25522121 None:intergenic
GCTTCACGTCTAAATTTAAA+TGG 0.188768 2.3:-25521421 MS.gene071562:CDS
GAAAATCTTCACAAGACTTT+TGG 0.198132 2.3:-25519191 MS.gene071562:CDS
AGGTCTGCTGGTTTCAGTTT+GGG 0.222410 2.3:-25519846 MS.gene071562:CDS
ACATTTGCTGAAGGCGAAAC+TGG 0.257273 2.3:+25519393 None:intergenic
ATATAGCTGTGCTTCATCTT+TGG 0.260832 2.3:+25518846 None:intergenic
TTCAGGCTCTTTACGAAAAC+AGG 0.265173 2.3:-25520607 MS.gene071562:intron
AGTACATCACTTGAATTCTA+TGG 0.279511 2.3:-25520813 MS.gene071562:CDS
TCTGGAGGATTGTCCATTCC+TGG 0.287243 2.3:-25521448 MS.gene071562:CDS
TATAGCTGTGCTTCATCTTT+GGG 0.291914 2.3:+25518847 None:intergenic
TCCGCGGATAACAAGTTCTA+TGG 0.295779 2.3:-25521509 MS.gene071562:CDS
GAGGTCTGCTGGTTTCAGTT+TGG 0.299623 2.3:-25519847 MS.gene071562:CDS
CTGCAGATGGGGAGGTCTGC+TGG 0.305802 2.3:-25519858 MS.gene071562:intron
CCTCAGGTAATTTCAATGTT+AGG 0.314958 2.3:-25520887 MS.gene071562:CDS
GACCTCCTGGCATTGGATTA+AGG 0.320047 2.3:-25519499 MS.gene071562:CDS
CCTGATCCATTTGGTCTGCT+TGG 0.327445 2.3:-25519308 MS.gene071562:CDS
GGAAGCTCTCATGGACATTC+AGG 0.340474 2.3:-25521697 MS.gene071562:CDS
GACCTGCATTTCCCAAAATT+GGG 0.351945 2.3:+25521530 None:intergenic
CCCGTACCAGAAACAGTATT+TGG 0.373729 2.3:+25519464 None:intergenic
TCTATGGGAAACATGGTTGC+TGG 0.374454 2.3:-25521493 MS.gene071562:CDS
ACAAGTCGTCCTAGTTCTGC+TGG 0.377291 2.3:-25520725 MS.gene071562:CDS
ACAGTATTTGGAGAATTTAG+AGG 0.382920 2.3:+25519476 None:intergenic
AACCAGTCCTTTAGAGATCA+TGG 0.383659 2.3:-25519362 MS.gene071562:CDS
TCTGGTGTTGTTGATACTGC+TGG 0.384992 2.3:+25519423 None:intergenic
TTTGCTGCAGGTGGTATTCA+GGG 0.392167 2.3:-25522035 MS.gene071562:intron
CAATCTGCTCCTGATCCATT+TGG 0.393312 2.3:-25519317 MS.gene071562:CDS
GGCGAAACTGGGATTGGTTC+TGG 0.410215 2.3:+25519405 None:intergenic
CACCAGTGTGCTGATAAATT+GGG 0.413695 2.3:+25522122 None:intergenic
TTGGCTTGTTAAGTGTAATC+AGG 0.413858 2.3:-25519289 MS.gene071562:CDS
ATACACAGTACCTTTGTATC+CGG 0.414552 2.3:+25520518 None:intergenic
TTGACAAGCGGCTCCATGTT+GGG 0.416934 2.3:+25518462 None:intergenic
GATCTGACATCTCTTGCTCT+TGG 0.425564 2.3:-25519254 MS.gene071562:CDS
TTAAATGGAAACAGCGGATC+TGG 0.427099 2.3:-25521406 MS.gene071562:CDS
TCAAATCTTCCAGACGGTGC+TGG 0.427253 2.3:-25522187 MS.gene071562:CDS
TCCAAATACTGTTTCTGGTA+CGG 0.434596 2.3:-25519465 MS.gene071562:CDS
AGTGATGTACTGCTTGCATA+TGG 0.441539 2.3:+25520825 None:intergenic
AAAGTCCGCCCAGCACCGTC+TGG 0.445363 2.3:+25522178 None:intergenic
CTATCTCATGGAAGCTCTCA+TGG 0.446529 2.3:-25521706 MS.gene071562:CDS
GTTTCTTGATGTAAGTGTAC+TGG 0.448726 2.3:+25521971 None:intergenic
CCAAATACTGTTTCTGGTAC+GGG 0.454336 2.3:-25519464 MS.gene071562:CDS
CAAATCTTCCAGACGGTGCT+GGG 0.461449 2.3:-25522186 MS.gene071562:CDS
TATTTGTACACAGGTGGTAA+TGG 0.462985 2.3:-25520064 MS.gene071562:intron
CTGGAGGATTGTCCATTCCT+GGG 0.463577 2.3:-25521447 MS.gene071562:CDS
TGGTAATGGAGAATTTACTA+TGG 0.464045 2.3:-25520050 MS.gene071562:CDS
GTACATCACTTGAATTCTAT+GGG 0.464321 2.3:-25520812 MS.gene071562:CDS
ACGATAAATAACATGCCAAC+TGG 0.465876 2.3:-25521945 MS.gene071562:CDS
CCTTTGTATCCGGGTAAAGC+TGG 0.469299 2.3:+25520528 None:intergenic
AACAAGCCAAGCAGACCAAA+TGG 0.472910 2.3:+25519302 None:intergenic
TGCTGGATGAGTTGATCATA+TGG 0.474187 2.3:+25519440 None:intergenic
TGAAAGTGGACCTCCAGCAC+TGG 0.474339 2.3:+25520853 None:intergenic
TTGGTCTGAGGAACCAGCTA+AGG 0.475047 2.3:-25519162 MS.gene071562:CDS
TGCATATGGCTTTGTGAAAG+TGG 0.479067 2.3:+25520839 None:intergenic
CGGACAGTTTCGAAAGTGCT+TGG 0.479912 2.3:+25518399 None:intergenic
ACTAGCGGACCTCCTGGCAT+TGG 0.481858 2.3:-25519506 MS.gene071562:CDS
GGAAATTCTTATCCCAGTGC+TGG 0.482050 2.3:-25520866 MS.gene071562:CDS
GCTGAAGGCGAAACTGGGAT+TGG 0.488397 2.3:+25519399 None:intergenic
GTAAGTGTACTGGGCATGTT+GGG 0.496785 2.3:+25521981 None:intergenic
GTCAAAGGGTGAACTGTCAC+TGG 0.496842 2.3:+25520769 None:intergenic
AATCAAGATCTTCATATGCA+TGG 0.500359 2.3:-25519741 MS.gene071562:CDS
TCCCATGATCTCTAAAGGAC+TGG 0.500395 2.3:+25519360 None:intergenic
AGAGCAAGAGATGTCAGATC+AGG 0.506012 2.3:+25519257 None:intergenic
CCAAGCAGACCAAATGGATC+AGG 0.506331 2.3:+25519308 None:intergenic
CAAGTCGTCCTAGTTCTGCT+GGG 0.507862 2.3:-25520724 MS.gene071562:CDS
CTATGGGAAACATGGTTGCT+GGG 0.508419 2.3:-25521492 MS.gene071562:CDS
CTTCATCCCATGATCTCTAA+AGG 0.510038 2.3:+25519355 None:intergenic
AACATTGGGAGGCTAAGCTC+TGG 0.510948 2.3:-25521466 MS.gene071562:CDS
CCACTAGAAAGACTTGATGT+AGG 0.511491 2.3:+25521909 None:intergenic
GAATGTCTCACGTGTAGAGC+AGG 0.512959 2.3:+25519092 None:intergenic
AGAGGCCTTAATCCAATGCC+AGG 0.516836 2.3:+25519494 None:intergenic
CTCTCAGTTACAAACGAGGT+TGG 0.517466 2.3:-25518524 MS.gene071562:intron
TCATATTTGCAGCTATCTCA+TGG 0.519422 2.3:-25521718 MS.gene071562:intron
AACAGCGGATCTGGTGGCTT+AGG 0.522109 2.3:-25521397 MS.gene071562:CDS
GAAGGAGAATGCTGCTGTTG+AGG 0.523767 2.3:+25519801 None:intergenic
GTTTAGACTAGCGGACCTCC+TGG 0.528923 2.3:-25519512 MS.gene071562:intron
TCTTCCTTCTGCTCTGTCAC+AGG 0.529243 2.3:-25521868 MS.gene071562:intron
CATTTGCTGAAGGCGAAACT+GGG 0.529768 2.3:+25519394 None:intergenic
AAAACAAGCACATACGAAAG+AGG 0.534593 2.3:-25518441 MS.gene071562:CDS
CAAGCACTTTCGAAACTGTC+CGG 0.537041 2.3:-25518398 MS.gene071562:CDS
TTGCTGCAGGTGGTATTCAG+GGG 0.537586 2.3:-25522034 MS.gene071562:intron
GGGAAGTCATTGAGGTCAAA+GGG 0.537865 2.3:+25520755 None:intergenic
ACGTGAAGCAAGCCCAGGAA+TGG 0.540879 2.3:+25521435 None:intergenic
TTTGACAAGCGGCTCCATGT+TGG 0.541017 2.3:+25518461 None:intergenic
TACACAGTACCTTTGTATCC+GGG 0.542891 2.3:+25520519 None:intergenic
GGAATCGATCTTACAACACT+CGG 0.543662 2.3:-25519233 MS.gene071562:CDS
AACTCTGGATCACCCTTAGC+TGG 0.543836 2.3:+25519149 None:intergenic
AGGGAAGTCATTGAGGTCAA+AGG 0.547739 2.3:+25520754 None:intergenic
ATCAAGATCTTCATATGCAT+GGG 0.548749 2.3:-25519740 MS.gene071562:CDS
TATTCTTTCTGCAGATGGGG+AGG 0.548953 2.3:-25519866 MS.gene071562:intron
CATTGAAGCACACTAAACTC+TGG 0.549441 2.3:+25519134 None:intergenic
TCTGCTGGTTTCAGTTTGGG+AGG 0.553029 2.3:-25519843 MS.gene071562:CDS
TTAGCTGGTTCCTCAGACCA+AGG 0.553506 2.3:+25519164 None:intergenic
AAACTCTACGTATCATTCAC+AGG 0.554744 2.3:-25519697 MS.gene071562:intron
TTTAGACGTGAAGCAAGCCC+AGG 0.557274 2.3:+25521430 None:intergenic
TTTCTTGATGTAAGTGTACT+GGG 0.560052 2.3:+25521972 None:intergenic
TCTGGTGGCTTAGGCGTGCA+AGG 0.564669 2.3:-25521388 MS.gene071562:CDS
GAAGACTTTCCAGCTTTACC+CGG 0.566230 2.3:-25520537 MS.gene071562:CDS
TGTTTGCAGTCTTCTCTGAA+CGG 0.566355 2.3:-25522217 None:intergenic
TATGGGAAACATGGTTGCTG+GGG 0.570932 2.3:-25521491 MS.gene071562:CDS
AAGTCGTCCTAGTTCTGCTG+GGG 0.573436 2.3:-25520723 MS.gene071562:CDS
ATGGGAAACATGGTTGCTGG+GGG 0.575821 2.3:-25521490 MS.gene071562:CDS
CACTTTCGAAACTGTCCGGA+GGG 0.577137 2.3:-25518394 None:intergenic
TTAGCTGAGGGAAGTCATTG+AGG 0.578044 2.3:+25520747 None:intergenic
GAAAGTGGACCTCCAGCACT+GGG 0.582125 2.3:+25520854 None:intergenic
ACCAGTCCTTTAGAGATCAT+GGG 0.582172 2.3:-25519361 MS.gene071562:CDS
AACAAGTTCTATGGGAAACA+TGG 0.587430 2.3:-25521500 MS.gene071562:CDS
ACCTGCATTTCCCAAAATTG+GGG 0.588453 2.3:+25521531 None:intergenic
CACGCACCCAACTGTCCTTG+AGG 0.588710 2.3:+25520698 None:intergenic
TGTAAGTGTACTGGGCATGT+TGG 0.589955 2.3:+25521980 None:intergenic
CCGCGGATAACAAGTTCTAT+GGG 0.590377 2.3:-25521508 MS.gene071562:CDS
GGTTGTTGAACCGCTCCAGT+TGG 0.590721 2.3:+25521930 None:intergenic
ATTGGGAGGCTAAGCTCTGG+AGG 0.591058 2.3:-25521463 MS.gene071562:CDS
CAGGGGTTGCACAACATGCA+TGG 0.597372 2.3:-25522017 MS.gene071562:CDS
CCCATAGAACTTGTTATCCG+CGG 0.600667 2.3:+25521508 None:intergenic
AATTCTTATCCCAGTGCTGG+AGG 0.601555 2.3:-25520863 MS.gene071562:CDS
CCAGCTTTACCCGGATACAA+AGG 0.603206 2.3:-25520528 MS.gene071562:intron
TGGTCTGAGGAACCAGCTAA+GGG 0.603363 2.3:-25519161 MS.gene071562:CDS
GAATCGATCTTACAACACTC+GGG 0.607310 2.3:-25519232 MS.gene071562:CDS
AGTCGTCCTAGTTCTGCTGG+GGG 0.608355 2.3:-25520722 MS.gene071562:CDS
TCAGGAGTCAACAGTAGAGG+AGG 0.608682 2.3:-25521679 MS.gene071562:intron
CCTAACATTGAAATTACCTG+AGG 0.611277 2.3:+25520887 None:intergenic
CTCACGTGTAGAGCAGGAGG+TGG 0.612457 2.3:+25519098 None:intergenic
TTACAGCTGACATTTGCTGA+AGG 0.613808 2.3:+25519384 None:intergenic
AATGGAAACAGCGGATCTGG+TGG 0.615708 2.3:-25521403 MS.gene071562:CDS
CATTCAGGAGTCAACAGTAG+AGG 0.618435 2.3:-25521682 MS.gene071562:CDS
ACCAGTGTGCTGATAAATTG+GGG 0.619587 2.3:+25522123 None:intergenic
ACGCCGCTGTTACTGACAGA+AGG 0.622596 2.3:+25519783 None:intergenic
AAATAACATGCCAACTGGAG+CGG 0.626036 2.3:-25521940 MS.gene071562:CDS
ATGAGTGGCGTGCTTCCACA+AGG 0.629918 2.3:-25521352 MS.gene071562:intron
CTAGGACGACTTGTTAGCTG+AGG 0.634920 2.3:+25520734 None:intergenic
TGTACCTGTGACAGAGCAGA+AGG 0.635690 2.3:+25521864 None:intergenic
TCCCCAATTTATCAGCACAC+TGG 0.641578 2.3:-25522124 MS.gene071562:intron
CCTACATCAAGTCTTTCTAG+TGG 0.642177 2.3:-25521909 MS.gene071562:CDS
TCTCCTTCTGTCAGTAACAG+CGG 0.645378 2.3:-25519786 MS.gene071562:CDS
ATCTTCCAGACGGTGCTGGG+CGG 0.646516 2.3:-25522183 MS.gene071562:CDS
GTATATAAAAGTTCCCAACA+TGG 0.647657 2.3:-25518475 MS.gene071562:CDS
TGATACGTAGAGTTTGAAGA+CGG 0.649131 2.3:+25519705 None:intergenic
TCAGGCTCTTTACGAAAACA+GGG 0.653371 2.3:-25520606 MS.gene071562:intron
TGTCTCACGTGTAGAGCAGG+AGG 0.654072 2.3:+25519095 None:intergenic
GTCGTCCTAGTTCTGCTGGG+GGG 0.662242 2.3:-25520721 MS.gene071562:CDS
GGACAAAATCGATTGATGAG+TGG 0.665922 2.3:-25521367 MS.gene071562:CDS
ATCACAAAGAGCATCGCATG+TGG 0.668075 2.3:-25518497 MS.gene071562:CDS
GCACTTTCGAAACTGTCCGG+AGG 0.673166 2.3:-25518395 MS.gene071562:CDS
TCTACTTCAAATCTTCCAGA+CGG 0.679222 2.3:-25522193 MS.gene071562:CDS
CTAAATTTAAATGGAAACAG+CGG 0.686707 2.3:-25521412 MS.gene071562:CDS
TAGGACGACTTGTTAGCTGA+GGG 0.692911 2.3:+25520735 None:intergenic
TGGGAAACATGGTTGCTGGG+GGG 0.692996 2.3:-25521489 MS.gene071562:CDS
GTTGCTCTCAGTTACAAACG+AGG 0.704716 2.3:-25518528 MS.gene071562:intron
TACATCACTTGAATTCTATG+GGG 0.705637 2.3:-25520811 MS.gene071562:CDS
GGCCTTAATCCAATGCCAGG+AGG 0.705806 2.3:+25519497 None:intergenic
TTGTGACTGCATCATTGACA+TGG 0.707974 2.3:+25519994 None:intergenic
AAGTGCTTGGATCAAAACAG+TGG 0.711615 2.3:+25518412 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATCCAATTATATAT+AGG - chr2.3:25519332-25519351 MS.gene071562:CDS 10.0%
!! AACTAAAAAGTAAAAAATAA+GGG + chr2.3:25521564-25521583 None:intergenic 10.0%
!! ATAACAAAAAATAACAAAAA+AGG + chr2.3:25521819-25521838 None:intergenic 10.0%
!! TAACAAAAAATAACAAAAAA+GGG + chr2.3:25521818-25521837 None:intergenic 10.0%
!! TTTGTATATGATTAAAAATA+AGG + chr2.3:25522033-25522052 None:intergenic 10.0%
!!! TATATAATTGGATATTTTTT+AGG + chr2.3:25519331-25519350 None:intergenic 10.0%
!!! TGTATTATTTTCTTATTTTT+GGG - chr2.3:25520173-25520192 MS.gene071562:intron 10.0%
!!! TTATTTTTTACTTTTTAGTT+GGG - chr2.3:25521564-25521583 MS.gene071562:intron 10.0%
!!! TTGTATTATTTTCTTATTTT+TGG - chr2.3:25520172-25520191 MS.gene071562:intron 10.0%
!!! TTTTGTTATTTTTTGTTATT+TGG - chr2.3:25521820-25521839 MS.gene071562:intron 10.0%
!! AAATATGATATATAGACAAA+TGG + chr2.3:25518873-25518892 None:intergenic 15.0%
!! CAACTAAAAAGTAAAAAATA+AGG + chr2.3:25521565-25521584 None:intergenic 15.0%
!! TCAAAACAAATAAAAGAAAA+TGG + chr2.3:25520328-25520347 None:intergenic 15.0%
!! TCATCTATATTTGTTTAATT+TGG - chr2.3:25519618-25519637 MS.gene071562:intron 15.0%
!!! CTTATTTTTTACTTTTTAGT+TGG - chr2.3:25521563-25521582 MS.gene071562:intron 15.0%
!!! GTATTATTTTCTTATTTTTG+GGG - chr2.3:25520174-25520193 MS.gene071562:intron 15.0%
!!! TTTTACGTATAATTTATCTA+GGG - chr2.3:25519440-25519459 MS.gene071562:CDS 15.0%
!! ACAAATATAGATGAATTTCT+AGG + chr2.3:25519612-25519631 None:intergenic 20.0%
!! ATAAGTAAAAAATTTCAGAG+TGG + chr2.3:25521967-25521986 None:intergenic 20.0%
!! GAAGATAACCTATATATAAT+TGG + chr2.3:25519343-25519362 None:intergenic 20.0%
!! GTCAAAATATTTCGAATTTA+AGG + chr2.3:25522006-25522025 None:intergenic 20.0%
!! TAATGTAATCTATACATTTC+AGG - chr2.3:25519979-25519998 MS.gene071562:intron 20.0%
!! TAATTTATCTAGGGATATAT+AGG - chr2.3:25519449-25519468 MS.gene071562:CDS 20.0%
!! TTATGATAATATTTGTACAC+AGG - chr2.3:25520530-25520549 MS.gene071562:CDS 20.0%
!! TTTCATTATTGAATCTTTGA+TGG - chr2.3:25520468-25520487 MS.gene071562:intron 20.0%
!!! ACATTATTCTTTTTTGTTGA+AGG + chr2.3:25519965-25519984 None:intergenic 20.0%
!!! CTTTTACGTATAATTTATCT+AGG - chr2.3:25519439-25519458 MS.gene071562:CDS 20.0%
!!! TCTTGGAAAAACTTTTTAAT+TGG - chr2.3:25521882-25521901 MS.gene071562:CDS 20.0%
!!! TTATTTTTGGGGTTATAAAA+GGG - chr2.3:25520185-25520204 MS.gene071562:intron 20.0%
!!! TTCTAATCGATTATGAATTT+TGG - chr2.3:25521069-25521088 MS.gene071562:intron 20.0%
!!! TTTCTTTTATTTGTTTTGAC+AGG - chr2.3:25520329-25520348 MS.gene071562:intron 20.0%
! AAAAAGTAAAAAATAAGGGC+AGG + chr2.3:25521560-25521579 None:intergenic 25.0%
! AAAAGTAAAAAATAAGGGCA+GGG + chr2.3:25521559-25521578 None:intergenic 25.0%
! AAATACATTAAACTATGCAC+CGG + chr2.3:25518850-25518869 None:intergenic 25.0%
! CTAAATTTAAATGGAAACAG+CGG - chr2.3:25519191-25519210 MS.gene071562:CDS 25.0%
! CTTTACTTATCTTGTTAACT+TGG - chr2.3:25519497-25519516 MS.gene071562:CDS 25.0%
! GGATTTAGTAATAACACAAA+TGG - chr2.3:25518969-25518988 MS.gene071562:CDS 25.0%
!! AAAACTTTTTATGTGATGTG+AGG - chr2.3:25520996-25521015 MS.gene071562:intron 25.0%
!! AAAATCTTCACAAGACTTTT+GGG - chr2.3:25521413-25521432 MS.gene071562:CDS 25.0%
!! TGAATAGGATTTGTTTCAAA+AGG + chr2.3:25521668-25521687 None:intergenic 25.0%
!! TGGTTTATTAAGTTGTTAGA+TGG - chr2.3:25521923-25521942 MS.gene071562:CDS 25.0%
!! TTTGTGTTATTACTAAATCC+AGG + chr2.3:25518969-25518988 None:intergenic 25.0%
!! TTTTTACTTATTTATCCACG+TGG - chr2.3:25521976-25521995 MS.gene071562:CDS 25.0%
!!! CGTTGTTTTACATATTTTAC+AGG - chr2.3:25521640-25521659 MS.gene071562:intron 25.0%
!!! CTTATTTTTGGGGTTATAAA+AGG - chr2.3:25520184-25520203 MS.gene071562:intron 25.0%
!!! TTTGGTTTTCTTTCTTTCTT+TGG - chr2.3:25519636-25519655 MS.gene071562:intron 25.0%
AAAAGATTACCGACAAACTA+TGG - chr2.3:25522050-25522069 MS.gene071562:intron 30.0%
AATCAAGATCTTCATATGCA+TGG - chr2.3:25520862-25520881 MS.gene071562:CDS 30.0%
AATTCTCCAAATACTGTTTC+TGG - chr2.3:25521133-25521152 MS.gene071562:intron 30.0%
ACAGTATTTGGAGAATTTAG+AGG + chr2.3:25521130-25521149 None:intergenic 30.0%
AGATCCTGAATCAAAATATG+AGG + chr2.3:25519696-25519715 None:intergenic 30.0%
AGTACATCACTTGAATTCTA+TGG - chr2.3:25519790-25519809 MS.gene071562:CDS 30.0%
AGTTTATACTCTCTTCTTGA+AGG - chr2.3:25520211-25520230 MS.gene071562:intron 30.0%
ATCAAGATCTTCATATGCAT+GGG - chr2.3:25520863-25520882 MS.gene071562:CDS 30.0%
ATCAGATAGTATCATGAACA+AGG + chr2.3:25520692-25520711 None:intergenic 30.0%
GCGATTATGAAACTAAATCA+AGG + chr2.3:25518542-25518561 None:intergenic 30.0%
GCTTCACGTCTAAATTTAAA+TGG - chr2.3:25519182-25519201 MS.gene071562:CDS 30.0%
GTACATCACTTGAATTCTAT+GGG - chr2.3:25519791-25519810 MS.gene071562:CDS 30.0%
GTATATAAAAGTTCCCAACA+TGG - chr2.3:25522128-25522147 MS.gene071562:CDS 30.0%
GTCTTTCATTATCTTTCTAC+CGG - chr2.3:25518828-25518847 MS.gene071562:intron 30.0%
TACATCACTTGAATTCTATG+GGG - chr2.3:25519792-25519811 MS.gene071562:CDS 30.0%
TATGAAACTAAATCAAGGAG+AGG + chr2.3:25518537-25518556 None:intergenic 30.0%
TATGCATAGTGAAAGTGAAT+AGG + chr2.3:25521683-25521702 None:intergenic 30.0%
TATTCTTGGATAACTGTTCA+TGG - chr2.3:25521857-25521876 MS.gene071562:intron 30.0%
TGATAATATTTGTACACAGG+TGG - chr2.3:25520533-25520552 MS.gene071562:CDS 30.0%
TTTCTTGATGTAAGTGTACT+GGG + chr2.3:25518634-25518653 None:intergenic 30.0%
TTTGAGTATCTCAAGAGTAA+CGG - chr2.3:25518776-25518795 MS.gene071562:intron 30.0%
! CATTTTGAATGCTAAACTCT+TGG + chr2.3:25520047-25520066 None:intergenic 30.0%
! CTTTTACTGTATGAAACTCA+CGG + chr2.3:25520642-25520661 None:intergenic 30.0%
! GAAAATCTTCACAAGACTTT+TGG - chr2.3:25521412-25521431 MS.gene071562:CDS 30.0%
! GTATTTTGCGAAGTTTACTT+TGG - chr2.3:25521614-25521633 MS.gene071562:intron 30.0%
! TGTCATTAAGTTGTTCTTTC+TGG + chr2.3:25520586-25520605 None:intergenic 30.0%
!! TCTTGTTGACTTGATTATCT+TGG - chr2.3:25519535-25519554 MS.gene071562:intron 30.0%
!! TGGTAATGGAGAATTTACTA+TGG - chr2.3:25520553-25520572 MS.gene071562:CDS 30.0%
!!! CTTTCCTCATATTTTGATTC+AGG - chr2.3:25519689-25519708 MS.gene071562:intron 30.0%
!!! TCTTGGTTTTGTTGTACAAT+AGG + chr2.3:25520030-25520049 None:intergenic 30.0%
!!! TGAATTTTGGTTTAGACTAG+CGG - chr2.3:25521082-25521101 MS.gene071562:intron 30.0%
AAAACAAGCACATACGAAAG+AGG - chr2.3:25522162-25522181 MS.gene071562:CDS 35.0%
AAACTCTACGTATCATTCAC+AGG - chr2.3:25520906-25520925 MS.gene071562:intron 35.0%
AACAAGTTCTATGGGAAACA+TGG - chr2.3:25519103-25519122 MS.gene071562:CDS 35.0%
AATAACACAAATGGAGTTGC+TGG - chr2.3:25518978-25518997 MS.gene071562:CDS 35.0%
AATGGTTCCTATTGTTGTAG+AGG - chr2.3:25520426-25520445 MS.gene071562:intron 35.0%
ACAGTTATCCAAGAATAACC+CGG + chr2.3:25521854-25521873 None:intergenic 35.0%
ACGATAAATAACATGCCAAC+TGG - chr2.3:25518658-25518677 MS.gene071562:intron 35.0%
ATACACAGTACCTTTGTATC+CGG + chr2.3:25520088-25520107 None:intergenic 35.0%
ATATAGCTGTGCTTCATCTT+TGG + chr2.3:25521760-25521779 None:intergenic 35.0%
ATCAACTCCTCTACAACAAT+AGG + chr2.3:25520436-25520455 None:intergenic 35.0%
ATCTGTATTCTTTCTGCAGA+TGG - chr2.3:25520732-25520751 MS.gene071562:CDS 35.0%
ATCTTCGCCAAATGTATGAA+CGG + chr2.3:25520401-25520420 None:intergenic 35.0%
ATTTGGCGAAGATGCTTTAA+TGG - chr2.3:25520408-25520427 MS.gene071562:intron 35.0%
CCTAACATTGAAATTACCTG+AGG + chr2.3:25519719-25519738 None:intergenic 35.0%
CCTCAGGTAATTTCAATGTT+AGG - chr2.3:25519716-25519735 MS.gene071562:CDS 35.0%
CGACTTTCCTAATGTAAATG+AGG - chr2.3:25520933-25520952 MS.gene071562:intron 35.0%
CTACCAAAATACATACCTTG+TGG + chr2.3:25519269-25519288 None:intergenic 35.0%
CTCTTGAGATACTCAAACAA+AGG + chr2.3:25518773-25518792 None:intergenic 35.0%
GATAACTGTTCATGGATTCT+TGG - chr2.3:25521865-25521884 MS.gene071562:intron 35.0%
GTTTCTTGATGTAAGTGTAC+TGG + chr2.3:25518635-25518654 None:intergenic 35.0%
TATAGCTGTGCTTCATCTTT+GGG + chr2.3:25521759-25521778 None:intergenic 35.0%
TATTTGTACACAGGTGGTAA+TGG - chr2.3:25520539-25520558 MS.gene071562:CDS 35.0%
TCATATTTGCAGCTATCTCA+TGG - chr2.3:25518885-25518904 MS.gene071562:intron 35.0%
TCTACTTCAAATCTTCCAGA+CGG - chr2.3:25518410-25518429 MS.gene071562:CDS 35.0%
TCTGTATTCTTTCTGCAGAT+GGG - chr2.3:25520733-25520752 MS.gene071562:CDS 35.0%
TGATACGTAGAGTTTGAAGA+CGG + chr2.3:25520901-25520920 None:intergenic 35.0%
TTACTTCCATGTCACCTTAA+TGG + chr2.3:25519300-25519319 None:intergenic 35.0%
! AACTTGCTTTGATGGGAATA+TGG + chr2.3:25521042-25521061 None:intergenic 35.0%
! ATAAGTGTTGTAGGAAATCC+TGG - chr2.3:25518948-25518967 MS.gene071562:intron 35.0%
! CTTCCACAAGGTATGTATTT+TGG - chr2.3:25519263-25519282 MS.gene071562:CDS 35.0%
! TCTTTTATGTGATGCAGCAA+GGG - chr2.3:25521592-25521611 MS.gene071562:intron 35.0%
! TTCTTTTATGTGATGCAGCA+AGG - chr2.3:25521591-25521610 MS.gene071562:intron 35.0%
! TTGACAGCACATTTTTCGTT+AGG - chr2.3:25520133-25520152 MS.gene071562:intron 35.0%
!! ACTTCATTTTCTAGTCAGTC+TGG - chr2.3:25518449-25518468 MS.gene071562:CDS 35.0%
!! TCCAAATACTGTTTCTGGTA+CGG - chr2.3:25521138-25521157 MS.gene071562:intron 35.0%
!! TTGGCTTGTTAAGTGTAATC+AGG - chr2.3:25521314-25521333 MS.gene071562:intron 35.0%
!! TTGTTATTTGGCCTTGTTTC+CGG - chr2.3:25521832-25521851 MS.gene071562:intron 35.0%
!!! AGGACTACACTCTTTTTTCA+CGG - chr2.3:25519469-25519488 MS.gene071562:CDS 35.0%
!!! TATGTGCTTGTTTTGACAAG+CGG + chr2.3:25522156-25522175 None:intergenic 35.0%
!!! TGTGAGGTTTTGTTTTGAAC+TGG - chr2.3:25521012-25521031 MS.gene071562:intron 35.0%
AAATAACATGCCAACTGGAG+CGG - chr2.3:25518663-25518682 MS.gene071562:intron 40.0%
AAGTGCTTGGATCAAAACAG+TGG + chr2.3:25522194-25522213 None:intergenic 40.0%
ACAAGTCCATTAAGGTGACA+TGG - chr2.3:25519291-25519310 MS.gene071562:CDS 40.0%
ACCTGCATTTCCCAAAATTG+GGG + chr2.3:25519075-25519094 None:intergenic 40.0%
AGTGATGTACTGCTTGCATA+TGG + chr2.3:25519781-25519800 None:intergenic 40.0%
CATTGAAGCACACTAAACTC+TGG + chr2.3:25521472-25521491 None:intergenic 40.0%
CCACTAGAAAGACTTGATGT+AGG + chr2.3:25518697-25518716 None:intergenic 40.0%
CCTACATCAAGTCTTTCTAG+TGG - chr2.3:25518694-25518713 MS.gene071562:intron 40.0%
CGAATTTAAGGATAACCACG+TGG + chr2.3:25521994-25522013 None:intergenic 40.0%
CTGTATTCTTTCTGCAGATG+GGG - chr2.3:25520734-25520753 MS.gene071562:CDS 40.0%
CTTCATCCCATGATCTCTAA+AGG + chr2.3:25521251-25521270 None:intergenic 40.0%
GAATCGATCTTACAACACTC+GGG - chr2.3:25521371-25521390 MS.gene071562:CDS 40.0%
GACCTGCATTTCCCAAAATT+GGG + chr2.3:25519076-25519095 None:intergenic 40.0%
GCAAGTGCCTCATTTACATT+AGG + chr2.3:25520943-25520962 None:intergenic 40.0%
GGAAAATAAGTAGCTGTGAG+TGG - chr2.3:25521903-25521922 MS.gene071562:CDS 40.0%
GGAATCGATCTTACAACACT+CGG - chr2.3:25521370-25521389 MS.gene071562:CDS 40.0%
GGACAAAATCGATTGATGAG+TGG - chr2.3:25519236-25519255 MS.gene071562:CDS 40.0%
TACACAGTACCTTTGTATCC+GGG + chr2.3:25520087-25520106 None:intergenic 40.0%
TCAGGCTCTTTACGAAAACA+GGG - chr2.3:25519997-25520016 MS.gene071562:CDS 40.0%
TGGTAGTCACAAGTCCATTA+AGG - chr2.3:25519283-25519302 MS.gene071562:CDS 40.0%
TGTGTGACCGTTCATACATT+TGG - chr2.3:25520391-25520410 MS.gene071562:intron 40.0%
TTAAATGGAAACAGCGGATC+TGG - chr2.3:25519197-25519216 MS.gene071562:CDS 40.0%
TTACCAATTGCAGCAGAAGA+TGG + chr2.3:25519023-25519042 None:intergenic 40.0%
TTCAGGCTCTTTACGAAAAC+AGG - chr2.3:25519996-25520015 MS.gene071562:CDS 40.0%
TTGTGACTGCATCATTGACA+TGG + chr2.3:25520612-25520631 None:intergenic 40.0%
! AACCAGTCCTTTAGAGATCA+TGG - chr2.3:25521241-25521260 MS.gene071562:intron 40.0%
! ACACCAGTGTGCTGATAAAT+TGG + chr2.3:25518485-25518504 None:intergenic 40.0%
! ACCAGTCCTTTAGAGATCAT+GGG - chr2.3:25521242-25521261 MS.gene071562:intron 40.0%
! ACCAGTGTGCTGATAAATTG+GGG + chr2.3:25518483-25518502 None:intergenic 40.0%
! ACGTCAGAAACTTGCTTTGA+TGG + chr2.3:25521050-25521069 None:intergenic 40.0%
! AGAGGAGGTATAAGTGTTGT+AGG - chr2.3:25518939-25518958 MS.gene071562:intron 40.0%
! CACCAGTGTGCTGATAAATT+GGG + chr2.3:25518484-25518503 None:intergenic 40.0%
! CGTCAGAAACTTGCTTTGAT+GGG + chr2.3:25521049-25521068 None:intergenic 40.0%
! CTCTCTTCTTGAAGGAGTTT+TGG - chr2.3:25520219-25520238 MS.gene071562:intron 40.0%
! GAGCAACAACCATAGTTTGT+CGG + chr2.3:25522062-25522081 None:intergenic 40.0%
! TTACAGCTGACATTTGCTGA+AGG + chr2.3:25521222-25521241 None:intergenic 40.0%
! TTGTTGTGAGGTTAGTCAGT+TGG - chr2.3:25520492-25520511 MS.gene071562:intron 40.0%
!! ATCTTTGATGGCTTGTTGTG+AGG - chr2.3:25520480-25520499 MS.gene071562:intron 40.0%
!! CCAAATACTGTTTCTGGTAC+GGG - chr2.3:25521139-25521158 MS.gene071562:intron 40.0%
!! TGCATATGGCTTTGTGAAAG+TGG + chr2.3:25519767-25519786 None:intergenic 40.0%
!! TGCTGGATGAGTTGATCATA+TGG + chr2.3:25521166-25521185 None:intergenic 40.0%
!! TGTTATTTGGCCTTGTTTCC+GGG - chr2.3:25521833-25521852 MS.gene071562:intron 40.0%
!! TTTTGATTCAGGATCTCCTC+AGG - chr2.3:25519700-25519719 MS.gene071562:CDS 40.0%
!!! ATTGGGAGTATCCCCAATTT+TGG - chr2.3:25519061-25519080 MS.gene071562:intron 40.0%
!!! TTGGGAGTATCCCCAATTTT+GGG - chr2.3:25519062-25519081 MS.gene071562:intron 40.0%
AACAAGCCAAGCAGACCAAA+TGG + chr2.3:25521304-25521323 None:intergenic 45.0%
AGAGCAAGAGATGTCAGATC+AGG + chr2.3:25521349-25521368 None:intergenic 45.0%
AGGGAAGTCATTGAGGTCAA+AGG + chr2.3:25519852-25519871 None:intergenic 45.0%
CAAGCACTTTCGAAACTGTC+CGG - chr2.3:25522205-25522224 MS.gene071562:CDS 45.0%
CAATCTGCTCCTGATCCATT+TGG - chr2.3:25521286-25521305 MS.gene071562:intron 45.0%
CACTGGTGTGAATACTTTGC+TGG - chr2.3:25518496-25518515 MS.gene071562:CDS 45.0%
CATTCAGGAGTCAACAGTAG+AGG - chr2.3:25518921-25518940 MS.gene071562:intron 45.0%
CCAAGAATAACCCGGAAACA+AGG + chr2.3:25521846-25521865 None:intergenic 45.0%
CCAATCCTGGAACAGCATTA+CGG + chr2.3:25519046-25519065 None:intergenic 45.0%
CCCGTACCAGAAACAGTATT+TGG + chr2.3:25521142-25521161 None:intergenic 45.0%
CCGCGGATAACAAGTTCTAT+GGG - chr2.3:25519095-25519114 MS.gene071562:intron 45.0%
CGTAATGCTGTTCCAGGATT+GGG - chr2.3:25519044-25519063 MS.gene071562:intron 45.0%
CTATCTCATGGAAGCTCTCA+TGG - chr2.3:25518897-25518916 MS.gene071562:intron 45.0%
CTATGGGAAACATGGTTGCT+GGG - chr2.3:25519111-25519130 MS.gene071562:CDS 45.0%
CTCTCAGTTACAAACGAGGT+TGG - chr2.3:25522079-25522098 MS.gene071562:intron 45.0%
CTTCCATCTTCTGCTGCAAT+TGG - chr2.3:25519017-25519036 MS.gene071562:intron 45.0%
GAAGACTTTCCAGCTTTACC+CGG - chr2.3:25520066-25520085 MS.gene071562:intron 45.0%
GAATACCACCTGCAGCAAAA+AGG + chr2.3:25518567-25518586 None:intergenic 45.0%
GATCTGACATCTCTTGCTCT+TGG - chr2.3:25521349-25521368 MS.gene071562:intron 45.0%
GGAAATTCTTATCCCAGTGC+TGG - chr2.3:25519737-25519756 MS.gene071562:CDS 45.0%
GGACCTGCATTTCCCAAAAT+TGG + chr2.3:25519077-25519096 None:intergenic 45.0%
GGGAAGTCATTGAGGTCAAA+GGG + chr2.3:25519851-25519870 None:intergenic 45.0%
GTAAGTGTACTGGGCATGTT+GGG + chr2.3:25518625-25518644 None:intergenic 45.0%
GTTGCTCTCAGTTACAAACG+AGG - chr2.3:25522075-25522094 MS.gene071562:intron 45.0%
TATGGGAAACATGGTTGCTG+GGG - chr2.3:25519112-25519131 MS.gene071562:CDS 45.0%
TATTCTTTCTGCAGATGGGG+AGG - chr2.3:25520737-25520756 MS.gene071562:CDS 45.0%
TCCCCAATTTATCAGCACAC+TGG - chr2.3:25518479-25518498 MS.gene071562:CDS 45.0%
TCCGCGGATAACAAGTTCTA+TGG - chr2.3:25519094-25519113 MS.gene071562:intron 45.0%
TCTATGGGAAACATGGTTGC+TGG - chr2.3:25519110-25519129 MS.gene071562:CDS 45.0%
TCTCCTTCTGTCAGTAACAG+CGG - chr2.3:25520817-25520836 MS.gene071562:CDS 45.0%
TGTAAGTGTACTGGGCATGT+TGG + chr2.3:25518626-25518645 None:intergenic 45.0%
TTAGCTGAGGGAAGTCATTG+AGG + chr2.3:25519859-25519878 None:intergenic 45.0%
TTTGCTGCAGGTGGTATTCA+GGG - chr2.3:25518568-25518587 MS.gene071562:intron 45.0%
! AATCGCTACCTTTTTGCTGC+AGG - chr2.3:25518556-25518575 MS.gene071562:intron 45.0%
! AATTCTTATCCCAGTGCTGG+AGG - chr2.3:25519740-25519759 MS.gene071562:CDS 45.0%
! ACATTTGCTGAAGGCGAAAC+TGG + chr2.3:25521213-25521232 None:intergenic 45.0%
! CATTTGCTGAAGGCGAAACT+GGG + chr2.3:25521212-25521231 None:intergenic 45.0%
! CCTTGTTTCCGGGTTATTCT+TGG - chr2.3:25521843-25521862 MS.gene071562:intron 45.0%
! TCCCATGATCTCTAAAGGAC+TGG + chr2.3:25521246-25521265 None:intergenic 45.0%
! TGAGGTTAGTCAGTTGGCTT+TGG - chr2.3:25520498-25520517 MS.gene071562:intron 45.0%
! TTTTGCTGCAGGTGGTATTC+AGG - chr2.3:25518567-25518586 MS.gene071562:intron 45.0%
!! ACAAGACTTTTGGGTCTCCT+TGG - chr2.3:25521422-25521441 MS.gene071562:CDS 45.0%
!! AGGTCTGCTGGTTTCAGTTT+GGG - chr2.3:25520757-25520776 MS.gene071562:CDS 45.0%
!! ATCACAAAGAGCATCGCATG+TGG - chr2.3:25522106-25522125 MS.gene071562:intron 45.0%
!! CCCATAGAACTTGTTATCCG+CGG + chr2.3:25519098-25519117 None:intergenic 45.0%
!! GAGTTGCTGGTTCTATTCCT+GGG - chr2.3:25518991-25519010 MS.gene071562:CDS 45.0%
!! TAGGACGACTTGTTAGCTGA+GGG + chr2.3:25519871-25519890 None:intergenic 45.0%
!! TCCCCAATTTTGGGAAATGC+AGG - chr2.3:25519071-25519090 MS.gene071562:intron 45.0%
!! TCTGGTGTTGTTGATACTGC+TGG + chr2.3:25521183-25521202 None:intergenic 45.0%
AACATTGGGAGGCTAAGCTC+TGG - chr2.3:25519137-25519156 MS.gene071562:CDS 50.0%
AACTCTGGATCACCCTTAGC+TGG + chr2.3:25521457-25521476 None:intergenic 50.0%
AATGGAAACAGCGGATCTGG+TGG - chr2.3:25519200-25519219 MS.gene071562:CDS 50.0%
AGAGGCCTTAATCCAATGCC+AGG + chr2.3:25521112-25521131 None:intergenic 50.0%
ATGGGAAACATGGTTGCTGG+GGG - chr2.3:25519113-25519132 MS.gene071562:CDS 50.0%
ATTGGGGATACTCCCAATCC+TGG + chr2.3:25519059-25519078 None:intergenic 50.0%
CAAATCTTCCAGACGGTGCT+GGG - chr2.3:25518417-25518436 MS.gene071562:CDS 50.0%
CCAAGCAGACCAAATGGATC+AGG + chr2.3:25521298-25521317 None:intergenic 50.0%
CCAGCTTTACCCGGATACAA+AGG - chr2.3:25520075-25520094 MS.gene071562:intron 50.0%
CCGTAATGCTGTTCCAGGAT+TGG - chr2.3:25519043-25519062 MS.gene071562:intron 50.0%
CCTGATCCATTTGGTCTGCT+TGG - chr2.3:25521295-25521314 MS.gene071562:intron 50.0%
CCTTTGTATCCGGGTAAAGC+TGG + chr2.3:25520078-25520097 None:intergenic 50.0%
CTGGAGGATTGTCCATTCCT+GGG - chr2.3:25519156-25519175 MS.gene071562:CDS 50.0%
GAAGGAGAATGCTGCTGTTG+AGG + chr2.3:25520805-25520824 None:intergenic 50.0%
GAATGTCTCACGTGTAGAGC+AGG + chr2.3:25521514-25521533 None:intergenic 50.0%
GCAGAAGATGGAAGAATCCC+AGG + chr2.3:25519011-25519030 None:intergenic 50.0%
GCTCTACACGTGAGACATTC+TGG - chr2.3:25521514-25521533 MS.gene071562:CDS 50.0%
GGAAGCTCTCATGGACATTC+AGG - chr2.3:25518906-25518925 MS.gene071562:intron 50.0%
GGTAACCGTAATGCTGTTCC+AGG - chr2.3:25519038-25519057 MS.gene071562:intron 50.0%
GTCAAAGGGTGAACTGTCAC+TGG + chr2.3:25519837-25519856 None:intergenic 50.0%
TCAAATCTTCCAGACGGTGC+TGG - chr2.3:25518416-25518435 MS.gene071562:CDS 50.0%
TCAGGAGTCAACAGTAGAGG+AGG - chr2.3:25518924-25518943 MS.gene071562:intron 50.0%
TCTGGAGGATTGTCCATTCC+TGG - chr2.3:25519155-25519174 MS.gene071562:CDS 50.0%
TCTTCCTTCTGCTCTGTCAC+AGG - chr2.3:25518735-25518754 MS.gene071562:intron 50.0%
TGGTCTGAGGAACCAGCTAA+GGG - chr2.3:25521442-25521461 MS.gene071562:CDS 50.0%
TGTACCTGTGACAGAGCAGA+AGG + chr2.3:25518742-25518761 None:intergenic 50.0%
TTGACAAGCGGCTCCATGTT+GGG + chr2.3:25522144-25522163 None:intergenic 50.0%
TTGCTGCAGGTGGTATTCAG+GGG - chr2.3:25518569-25518588 MS.gene071562:intron 50.0%
TTGGTCTGAGGAACCAGCTA+AGG - chr2.3:25521441-25521460 MS.gene071562:CDS 50.0%
TTTAGACGTGAAGCAAGCCC+AGG + chr2.3:25519176-25519195 None:intergenic 50.0%
TTTGACAAGCGGCTCCATGT+TGG + chr2.3:25522145-25522164 None:intergenic 50.0%
! GACCTCCTGGCATTGGATTA+AGG - chr2.3:25521104-25521123 MS.gene071562:intron 50.0%
! TTAGCTGGTTCCTCAGACCA+AGG + chr2.3:25521442-25521461 None:intergenic 50.0%
!! AAGTCGTCCTAGTTCTGCTG+GGG - chr2.3:25519880-25519899 MS.gene071562:intron 50.0%
!! ACAAGTCGTCCTAGTTCTGC+TGG - chr2.3:25519878-25519897 MS.gene071562:intron 50.0%
!! CAAGTCGTCCTAGTTCTGCT+GGG - chr2.3:25519879-25519898 MS.gene071562:intron 50.0%
!! CGGACAGTTTCGAAAGTGCT+TGG + chr2.3:25522207-25522226 None:intergenic 50.0%
!! CTAGGACGACTTGTTAGCTG+AGG + chr2.3:25519872-25519891 None:intergenic 50.0%
!! GAGGTCTGCTGGTTTCAGTT+TGG - chr2.3:25520756-25520775 MS.gene071562:CDS 50.0%
!! GGAGTTGCTGGTTCTATTCC+TGG - chr2.3:25518990-25519009 MS.gene071562:CDS 50.0%
!! TCTGCTGGTTTCAGTTTGGG+AGG - chr2.3:25520760-25520779 MS.gene071562:CDS 50.0%
!! TTTTGGGAAATGCAGGTCCG+CGG - chr2.3:25519078-25519097 MS.gene071562:intron 50.0%
!! TTTTGGGTCTCCTTGGTCTG+AGG - chr2.3:25521429-25521448 MS.gene071562:CDS 50.0%
AACAGCGGATCTGGTGGCTT+AGG - chr2.3:25519206-25519225 MS.gene071562:CDS 55.0%
AAGGACAGTTGGGTGCGTGA+TGG - chr2.3:25519909-25519928 MS.gene071562:intron 55.0%
ACGCCGCTGTTACTGACAGA+AGG + chr2.3:25520823-25520842 None:intergenic 55.0%
ACGTGAAGCAAGCCCAGGAA+TGG + chr2.3:25519171-25519190 None:intergenic 55.0%
ATGAGTGGCGTGCTTCCACA+AGG - chr2.3:25519251-25519270 MS.gene071562:CDS 55.0%
ATGGTTGCTGGGGGGAACAT+TGG - chr2.3:25519122-25519141 MS.gene071562:CDS 55.0%
CAGGGGTTGCACAACATGCA+TGG - chr2.3:25518586-25518605 MS.gene071562:intron 55.0%
GAAAGTGGACCTCCAGCACT+GGG + chr2.3:25519752-25519771 None:intergenic 55.0%
GCACTTTCGAAACTGTCCGG+AGG - chr2.3:25522208-25522227 MS.gene071562:CDS 55.0%
GCTGAAGGCGAAACTGGGAT+TGG + chr2.3:25521207-25521226 None:intergenic 55.0%
GGCCTTAATCCAATGCCAGG+AGG + chr2.3:25521109-25521128 None:intergenic 55.0%
GGTTGTTGAACCGCTCCAGT+TGG + chr2.3:25518676-25518695 None:intergenic 55.0%
TGAAAGTGGACCTCCAGCAC+TGG + chr2.3:25519753-25519772 None:intergenic 55.0%
TGGGAAACATGGTTGCTGGG+GGG - chr2.3:25519114-25519133 MS.gene071562:CDS 55.0%
TGGTTGCTGGGGGGAACATT+GGG - chr2.3:25519123-25519142 MS.gene071562:CDS 55.0%
TGTCTCACGTGTAGAGCAGG+AGG + chr2.3:25521511-25521530 None:intergenic 55.0%
! ATTGGGAGGCTAAGCTCTGG+AGG - chr2.3:25519140-25519159 MS.gene071562:CDS 55.0%
! CGCTACCTTTTTGCTGCAGG+TGG - chr2.3:25518559-25518578 MS.gene071562:intron 55.0%
! GTTTAGACTAGCGGACCTCC+TGG - chr2.3:25521091-25521110 MS.gene071562:intron 55.0%
!! AGTCGTCCTAGTTCTGCTGG+GGG - chr2.3:25519881-25519900 MS.gene071562:intron 55.0%
!! GGCGAAACTGGGATTGGTTC+TGG + chr2.3:25521201-25521220 None:intergenic 55.0%
CACGCACCCAACTGTCCTTG+AGG + chr2.3:25519908-25519927 None:intergenic 60.0%
CTCACGTGTAGAGCAGGAGG+TGG + chr2.3:25521508-25521527 None:intergenic 60.0%
TCTGGTGGCTTAGGCGTGCA+AGG - chr2.3:25519215-25519234 MS.gene071562:CDS 60.0%
TTGCTGGGGGGAACATTGGG+AGG - chr2.3:25519126-25519145 MS.gene071562:CDS 60.0%
! ACTAGCGGACCTCCTGGCAT+TGG - chr2.3:25521097-25521116 MS.gene071562:intron 60.0%
! ATCTTCCAGACGGTGCTGGG+CGG - chr2.3:25518420-25518439 MS.gene071562:CDS 60.0%
!! GTCGTCCTAGTTCTGCTGGG+GGG - chr2.3:25519882-25519901 MS.gene071562:intron 60.0%
AAAGTCCGCCCAGCACCGTC+TGG + chr2.3:25518428-25518447 None:intergenic 65.0%
AGTTCTGCTGGGGGGCCTCA+AGG - chr2.3:25519890-25519909 MS.gene071562:intron 65.0%
CTGCAGATGGGGAGGTCTGC+TGG - chr2.3:25520745-25520764 MS.gene071562:CDS 65.0%
GGGGGGCCTCAAGGACAGTT+GGG - chr2.3:25519899-25519918 MS.gene071562:intron 65.0%
TGAGGCCCCCCAGCAGAACT+AGG + chr2.3:25519890-25519909 None:intergenic 65.0%
TGGGGGGCCTCAAGGACAGT+TGG - chr2.3:25519898-25519917 MS.gene071562:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 25518395 25522230 25518395 ID=MS.gene071562
chr2.3 mRNA 25518395 25522230 25518395 ID=MS.gene071562.t1;Parent=MS.gene071562
chr2.3 exon 25522125 25522230 25522125 ID=MS.gene071562.t1.exon1;Parent=MS.gene071562.t1
chr2.3 CDS 25522125 25522230 25522125 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
chr2.3 exon 25521869 25522047 25521869 ID=MS.gene071562.t1.exon2;Parent=MS.gene071562.t1
chr2.3 CDS 25521869 25522047 25521869 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
chr2.3 exon 25521680 25521728 25521680 ID=MS.gene071562.t1.exon3;Parent=MS.gene071562.t1
chr2.3 CDS 25521680 25521728 25521680 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
chr2.3 exon 25521353 25521565 25521353 ID=MS.gene071562.t1.exon4;Parent=MS.gene071562.t1
chr2.3 CDS 25521353 25521565 25521353 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
chr2.3 exon 25520705 25520914 25520705 ID=MS.gene071562.t1.exon5;Parent=MS.gene071562.t1
chr2.3 CDS 25520705 25520914 25520705 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
chr2.3 exon 25520529 25520624 25520529 ID=MS.gene071562.t1.exon6;Parent=MS.gene071562.t1
chr2.3 CDS 25520529 25520624 25520529 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
chr2.3 exon 25519985 25520073 25519985 ID=MS.gene071562.t1.exon7;Parent=MS.gene071562.t1
chr2.3 CDS 25519985 25520073 25519985 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
chr2.3 exon 25519698 25519874 25519698 ID=MS.gene071562.t1.exon8;Parent=MS.gene071562.t1
chr2.3 CDS 25519698 25519874 25519698 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
chr2.3 exon 25519103 25519528 25519103 ID=MS.gene071562.t1.exon9;Parent=MS.gene071562.t1
chr2.3 CDS 25519103 25519528 25519103 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
chr2.3 exon 25518964 25519016 25518964 ID=MS.gene071562.t1.exon10;Parent=MS.gene071562.t1
chr2.3 CDS 25518964 25519016 25518964 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
chr2.3 exon 25518832 25518873 25518832 ID=MS.gene071562.t1.exon11;Parent=MS.gene071562.t1
chr2.3 CDS 25518832 25518873 25518832 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
chr2.3 exon 25518395 25518539 25518395 ID=MS.gene071562.t1.exon12;Parent=MS.gene071562.t1
chr2.3 CDS 25518395 25518539 25518395 ID=cds.MS.gene071562.t1;Parent=MS.gene071562.t1
Gene Sequence

>MS.gene071562

TCTTCTCTGAACGGATCTACTTCAAATCTTCCAGACGGTGCTGGGCGGACTTTTACTTCATTTTCTAGTCAGTCTGGTGCAGCTTCCCCAATTTATCAGCACACTGGTGTGAATACTTTGCTGGAGTCAATCATTTTATCCTCTCCTTGATTTAGTTTCATAATCGCTACCTTTTTGCTGCAGGTGGTATTCAGGGGTTGCACAACATGCATGGTAGCTTTAACATTCCCAACATGCCCAGTACACTTACATCAAGAAACTCAACGATAAATAACATGCCAACTGGAGCGGTTCAACAACCTACATCAAGTCTTTCTAGTGGAAGATTTACATCTAATAATCTTCCTTCTGCTCTGTCACAGGTACATGTGAATGCCTTTGTTTGAGTATCTCAAGAGTAACGGCTGAGCTATTGAACGTACTCAACTCTTCTGTCTTTCATTATCTTTCTACCGGTGCATAGTTTAATGTATTTCCATTTGTCTATATATCATATTTGCAGCTATCTCATGGAAGCTCTCATGGACATTCAGGAGTCAACAGTAGAGGAGGTATAAGTGTTGTAGGAAATCCTGGATTTAGTAATAACACAAATGGAGTTGCTGGTTCTATTCCTGGGATTCTTCCATCTTCTGCTGCAATTGGTAACCGTAATGCTGTTCCAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCGCGGATAACAAGTTCTATGGGAAACATGGTTGCTGGGGGGAACATTGGGAGGCTAAGCTCTGGAGGATTGTCCATTCCTGGGCTTGCTTCACGTCTAAATTTAAATGGAAACAGCGGATCTGGTGGCTTAGGCGTGCAAGGACAAAATCGATTGATGAGTGGCGTGCTTCCACAAGGTATGTATTTTGGTAGTCACAAGTCCATTAAGGTGACATGGAAGTAATATTTTCTCCTAAAAAATATCCAATTATATATAGGTTATCTTCATATGTTCAGTTGAGATCTCTTTCAAAAGAGTTAGAATTAGATATTAAAAGTGATGTAAACTCTTTTTATGTATTTCTTTTACGTATAATTTATCTAGGGATATATAGGACTACACTCTTTTTTCACGGATGATCTTTACTTATCTTGTTAACTTGGTTATCGCTTTTCATATCTTGTTGACTTGATTATCTTGGATATAGTTTTCTTATTATGTACTTTGTTGCATTAGATGACATGTTTGAGTGCCTAGAAATTCATCTATATTTGTTTAATTTGGTTTTCTTTCTTTCTTTGGAATCTCATGAAGCTATGTTGTTGTACACTTCTTTCCTCATATTTTGATTCAGGATCTCCTCAGGTAATTTCAATGTTAGGAAATTCTTATCCCAGTGCTGGAGGTCCACTTTCACAAAGCCATATGCAAGCAGTACATCACTTGAATTCTATGGGGATGTTGAATGATTTGAATTCCAGTGACAGTTCACCCTTTGACCTCAATGACTTCCCTCAGCTAACAAGTCGTCCTAGTTCTGCTGGGGGGCCTCAAGGACAGTTGGGTGCGTGATGGAAAATGTTGTTTAGTTTAATATATTCTTCTCCTTCAACAAAAAAGAATAATGTAATCTATACATTTCAGGCTCTTTACGAAAACAGGGTCTTAGTCCTATTGTACAACAAAACCAAGAGTTTAGCATTCAAAATGAAGACTTTCCAGCTTTACCCGGATACAAAGGTACTGTGTATAACTTGAATGATCTTTGTGTGCTAATTGACAGCACATTTTTCGTTAGGAAATTATGCAGCTCAGTTGTATTATTTTCTTATTTTTGGGGTTATAAAAGGGTGAAGTTTATACTCTCTTCTTGAAGGAGTTTTGGATATTTGCTTATAAATCTGCTTTTTAGCTTCATTAAATTTTTTGCATATGCTTCATCGTGCATAATGTATCAGTGTTTTGTCTCCATTTTCTTTTATTTGTTTTGACAGGTATTATGACAGTTTCTTGCATTAGTTTTTTCTATATATTTGTGTGACCGTTCATACATTTGGCGAAGATGCTTTAATGGTTCCTATTGTTGTAGAGGAGTTGATGATTTATCATGTTTTCATTATTGAATCTTTGATGGCTTGTTGTGAGGTTAGTCAGTTGGCTTTGGCATTTGTTTTTATGATAATATTTGTACACAGGTGGTAATGGAGAATTTACTATGGATATGCACCAGAAAGAACAACTTAATGACAATACCATGTCAATGATGCAGTCACAACATTTCTCCGTGAGTTTCATACAGTAAAAGATTAAGATGTTGTGTTCTTAATCTTATCCTTGTTCATGATACTATCTGATCAAAATTTGTTCTCAATCTTATCTGTATTCTTTCTGCAGATGGGGAGGTCTGCTGGTTTCAGTTTGGGAGGATCTTATTCATCACATCGTCCTCAACAGCAGCATTCTCCTTCTGTCAGTAACAGCGGCGTCTCTTTTTCATCTATGAACAATCAAGATCTTCATATGCATGGGTCTGATGTTTTTCCGTCTTCAAACTCTACGTATCATTCACAGGTACACGACTTTCCTAATGTAAATGAGGCACTTGCTTTTGTGTTAGAATGTATTTTATTTTATTTTTTAAAACTTTTTATGTGATGTGAGGTTTTGTTTTGAACTGGAATTCCATATTCCCATCAAAGCAAGTTTCTGACGTTCTAATCGATTATGAATTTTGGTTTAGACTAGCGGACCTCCTGGCATTGGATTAAGGCCTCTAAATTCTCCAAATACTGTTTCTGGTACGGGTCCATATGATCAACTCATCCAGCAGTATCAACAACACCAGAACCAATCCCAGTTTCGCCTTCAGCAAATGTCAGCTGTAAACCAGTCCTTTAGAGATCATGGGATGAAGTCTATGCAAACTGCACAATCTGCTCCTGATCCATTTGGTCTGCTTGGCTTGTTAAGTGTAATCAGGATGAGTGATCCTGATCTGACATCTCTTGCTCTTGGAATCGATCTTACAACACTCGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACTTTTGGGTCTCCTTGGTCTGAGGAACCAGCTAAGGGTGATCCAGAGTTTAGTGTGCTTCAATGTTATTATGCTAAACCACCTCCTGCTCTACACGTGAGACATTCTGGCTTTTGCTTTATATATTTTCCCTGCCCTTATTTTTTACTTTTTAGTTGGGCTAATTCTTTTATGTGATGCAGCAAGGGTATTTTGCGAAGTTTACTTTGGAGACGTTGTTTTACATATTTTACAGGTGCCTTTTGAAACAAATCCTATTCACTTTCACTATGCATACTTGTTATTATAATATTAGTACTAAATTAAATATGATCTTTTATTTCAGCATGCCCAAAGATGAAGCACAGCTATATGCAGCAAATGAACTGTATGCATTCGATCACATATACCCTTTTTTGTTATTTTTTGTTATTTGGCCTTGTTTCCGGGTTATTCTTGGATAACTGTTCATGGATTCTTGGAAAAACTTTTTAATTGGAAAATAAGTAGCTGTGAGTGGTTTATTAAGTTGTTAGATGGTTTTACTTTTAGCACATACCACTCTGAAATTTTTTACTTATTTATCCACGTGGTTATCCTTAAATTCGAAATATTTTGACTTATCCTTATTTTTAATCATATACAAAAGATTACCGACAAACTATGGTTGTTGCTCTCAGTTACAAACGAGGTTGGTTTTATCACAAAGAGCATCGCATGTGGTATATAAAAGTTCCCAACATGGAGCCGCTTGTCAAAACAAGCACATACGAAAGAGGATCTTACCACTGTTTTGATCCAAGCACTTTCGAAACTGTCCGGAGG
Protein sequence

>MS.gene071562.t1

SSLNGSTSNLPDGAGRTFTSFSSQSGAASPIYQHTGGIQGLHNMHGSFNIPNMPSTLTSRNSTINNMPTGAVQQPTSSLSSGRFTSNNLPSALSQLSHGSSHGHSGVNSRGGLGVSPILGNAGPRITSSMGNMVAGGNIGRLSSGGLSIPGLASRLNLNGNSGSGGLGVQGQNRLMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHMQAVHHLNSMGMLNDLNSSDSSPFDLNDFPQLTSRPSSAGGPQGQLGSLRKQGLSPIVQQNQEFSIQNEDFPALPGYKGGNGEFTMDMHQKEQLNDNTMSMMQSQHFSMGRSAGFSLGGSYSSHRPQQQHSPSVSNSGVSFSSMNNQDLHMHGSDVFPSSNSTYHSQTSGPPGIGLRPLNSPNTVSGTGPYDQLIQQYQQHQNQSQFRLQQMSAVNQSFRDHGMKSMQTAQSAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSEEPAKGDPEFSVLQCYYAKPPPALHQGYFAKFTLETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRMWYIKVPNMEPLVKTSTYERGSYHCFDPSTFETVRR