Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25689.t1 | RHN48864.1 | 99.7 | 600 | 2 | 0 | 1 | 600 | 1 | 600 | 0.00E+00 | 1211.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25689.t1 | Q8W0Z9 | 78.0 | 599 | 119 | 6 | 1 | 593 | 1 | 592 | 2.5e-269 | 929.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25689.t1 | A0A396HAN5 | 99.7 | 600 | 2 | 0 | 1 | 600 | 1 | 600 | 0.0e+00 | 1211.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64648 | MS.gene25689 | PPI |
| MS.gene046235 | MS.gene25689 | PPI |
| MS.gene25689 | MS.gene028620 | PPI |
| MS.gene95244 | MS.gene25689 | PPI |
| MS.gene25689 | MS.gene30926 | PPI |
| MS.gene071562 | MS.gene25689 | PPI |
| MS.gene028621 | MS.gene25689 | PPI |
| MS.gene31185 | MS.gene25689 | PPI |
| MS.gene071561 | MS.gene25689 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25689.t1 | MTR_7g107240 | 94.333 | 600 | 2 | 1 | 1 | 600 | 1 | 568 | 0.0 | 1163 |
| MS.gene25689.t1 | MTR_1g054535 | 81.803 | 599 | 101 | 3 | 1 | 599 | 1 | 591 | 0.0 | 979 |
| MS.gene25689.t1 | MTR_1g054535 | 76.461 | 599 | 96 | 4 | 1 | 599 | 1 | 554 | 0.0 | 885 |
| MS.gene25689.t1 | MTR_1g054605 | 82.851 | 449 | 72 | 3 | 152 | 599 | 57 | 501 | 0.0 | 735 |
| MS.gene25689.t1 | MTR_1g054545 | 77.728 | 449 | 68 | 3 | 152 | 599 | 348 | 765 | 0.0 | 682 |
| MS.gene25689.t1 | MTR_1g054605 | 77.060 | 449 | 69 | 4 | 152 | 599 | 57 | 472 | 0.0 | 667 |
| MS.gene25689.t1 | MTR_5g026280 | 27.751 | 418 | 206 | 11 | 223 | 595 | 4 | 370 | 1.03e-35 | 138 |
| MS.gene25689.t1 | MTR_5g026280 | 27.751 | 418 | 206 | 11 | 223 | 595 | 24 | 390 | 1.46e-35 | 138 |
| MS.gene25689.t1 | MTR_6g084560 | 29.517 | 393 | 191 | 11 | 249 | 595 | 59 | 411 | 1.90e-34 | 136 |
| MS.gene25689.t1 | MTR_8g103870 | 29.243 | 383 | 200 | 13 | 241 | 591 | 47 | 390 | 4.39e-31 | 125 |
| MS.gene25689.t1 | MTR_5g026280 | 27.513 | 378 | 179 | 10 | 262 | 595 | 12 | 338 | 7.72e-30 | 120 |
| MS.gene25689.t1 | MTR_1g011720 | 34.615 | 234 | 116 | 8 | 250 | 477 | 175 | 377 | 6.61e-27 | 116 |
| MS.gene25689.t1 | MTR_1g011720 | 34.615 | 234 | 116 | 8 | 250 | 477 | 175 | 377 | 6.67e-27 | 116 |
| MS.gene25689.t1 | MTR_6g084560 | 29.107 | 347 | 161 | 10 | 249 | 549 | 59 | 366 | 1.55e-26 | 112 |
| MS.gene25689.t1 | MTR_6g084560 | 31.429 | 245 | 127 | 6 | 249 | 482 | 59 | 273 | 1.79e-23 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25689.t1 | AT3G58580 | 76.628 | 599 | 131 | 4 | 1 | 593 | 1 | 596 | 0.0 | 940 |
| MS.gene25689.t1 | AT3G58560 | 77.295 | 599 | 123 | 6 | 1 | 593 | 1 | 592 | 0.0 | 921 |
| MS.gene25689.t1 | AT3G18500 | 30.673 | 401 | 208 | 14 | 222 | 591 | 82 | 443 | 1.35e-38 | 148 |
| MS.gene25689.t1 | AT3G18500 | 30.402 | 398 | 209 | 14 | 222 | 591 | 82 | 439 | 7.21e-38 | 146 |
| MS.gene25689.t1 | AT3G18500 | 30.250 | 400 | 210 | 14 | 222 | 591 | 82 | 442 | 9.67e-38 | 145 |
| MS.gene25689.t1 | AT1G31500 | 28.643 | 398 | 209 | 13 | 220 | 591 | 5 | 353 | 8.96e-33 | 129 |
| MS.gene25689.t1 | AT1G31500 | 28.502 | 414 | 214 | 14 | 211 | 591 | 14 | 378 | 9.99e-33 | 130 |
| MS.gene25689.t1 | AT1G31500 | 28.643 | 398 | 209 | 13 | 220 | 591 | 35 | 383 | 1.07e-32 | 130 |
| MS.gene25689.t1 | AT1G73875 | 29.124 | 388 | 189 | 12 | 250 | 591 | 100 | 447 | 1.36e-31 | 128 |
| MS.gene25689.t1 | AT1G31500 | 28.686 | 373 | 195 | 11 | 244 | 591 | 91 | 417 | 8.66e-31 | 125 |
| MS.gene25689.t1 | AT1G31500 | 28.686 | 373 | 195 | 11 | 244 | 591 | 86 | 412 | 9.74e-31 | 125 |
| MS.gene25689.t1 | AT3G18500 | 27.250 | 400 | 200 | 12 | 222 | 591 | 82 | 420 | 1.39e-28 | 119 |
| MS.gene25689.t1 | AT5G11350 | 32.258 | 248 | 125 | 8 | 244 | 479 | 17 | 233 | 3.63e-27 | 116 |
| MS.gene25689.t1 | AT5G11350 | 32.510 | 243 | 121 | 8 | 247 | 477 | 180 | 391 | 2.06e-26 | 115 |
| MS.gene25689.t1 | AT5G11350 | 32.510 | 243 | 121 | 8 | 247 | 477 | 180 | 391 | 2.09e-26 | 115 |
| MS.gene25689.t1 | AT5G11350 | 32.510 | 243 | 121 | 8 | 247 | 477 | 181 | 392 | 2.17e-26 | 114 |
| MS.gene25689.t1 | AT5G11350 | 32.510 | 243 | 121 | 8 | 247 | 477 | 180 | 391 | 2.51e-26 | 114 |
| MS.gene25689.t1 | AT1G31500 | 30.070 | 286 | 149 | 10 | 211 | 464 | 14 | 280 | 2.06e-25 | 106 |
| MS.gene25689.t1 | AT1G31500 | 30.370 | 270 | 144 | 9 | 220 | 464 | 35 | 285 | 2.86e-25 | 106 |
| MS.gene25689.t1 | AT1G31500 | 30.204 | 245 | 131 | 7 | 244 | 464 | 86 | 314 | 3.05e-23 | 101 |
| MS.gene25689.t1 | AT1G73875 | 30.638 | 235 | 126 | 7 | 250 | 477 | 100 | 304 | 2.57e-21 | 97.1 |
| MS.gene25689.t1 | AT1G73875 | 28.800 | 250 | 124 | 7 | 386 | 591 | 30 | 269 | 1.68e-15 | 77.8 |
Find 0 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTAATTTTTTTA+TGG | + | 51719:1010-1029 | MS.gene25689:intron | 0.0% |
| !! | AAAAACAATATAAAAACTTT+AGG | - | 51719:2153-2172 | MS.gene25689:intergenic | 10.0% |
| !! | TAAAAAAAAAACATAACTTA+AGG | - | 51719:1001-1020 | MS.gene25689:intergenic | 10.0% |
| !!! | AAAGTTTTCTTTATATTTTT+AGG | + | 51719:4619-4638 | MS.gene25689:intron | 10.0% |
| !!! | TTTTAAAAGAAAAAGAAAAT+TGG | - | 51719:3906-3925 | MS.gene25689:intergenic | 10.0% |
| !! | AATACTAACTACAATTAATA+AGG | + | 51719:1410-1429 | MS.gene25689:intron | 15.0% |
| !! | ATACTAACTACAATTAATAA+GGG | + | 51719:1411-1430 | MS.gene25689:intron | 15.0% |
| !! | ATCAAATGATATTGTTAAAT+AGG | - | 51719:2577-2596 | MS.gene25689:intergenic | 15.0% |
| !! | ATTATTCAAAAGAAAATACA+TGG | - | 51719:4881-4900 | MS.gene25689:intergenic | 15.0% |
| !! | CAACCAATAAATATAAAATT+AGG | - | 51719:5750-5769 | MS.gene25689:intergenic | 15.0% |
| !! | TATTTATATCACCAATAAAA+AGG | - | 51719:5163-5182 | MS.gene25689:intergenic | 15.0% |
| !! | TTTAACAATATCATTTGATT+TGG | + | 51719:2578-2597 | MS.gene25689:intron | 15.0% |
| !!! | AATTTTATATTTATTGGTTG+TGG | + | 51719:5750-5769 | MS.gene25689:intron | 15.0% |
| !!! | ATATAAATGTTATTTGTCTT+TGG | + | 51719:3351-3370 | MS.gene25689:intron | 15.0% |
| !!! | ATTTAATTAGTGGATAAATT+TGG | + | 51719:2438-2457 | MS.gene25689:intron | 15.0% |
| !!! | ATTTTATATTTATTGGTTGT+GGG | + | 51719:5751-5770 | MS.gene25689:intron | 15.0% |
| !!! | TTAGATTAAAACCTTTTTAT+TGG | + | 51719:5149-5168 | MS.gene25689:intron | 15.0% |
| !! | AAAAAACATAACTTAAGGTA+AGG | - | 51719:996-1015 | MS.gene25689:intergenic | 20.0% |
| !! | AAAACAAGATCAATAAAATG+GGG | - | 51719:1667-1686 | MS.gene25689:intergenic | 20.0% |
| !! | ACAAAACAAGATCAATAAAA+TGG | - | 51719:1669-1688 | MS.gene25689:intergenic | 20.0% |
| !! | ATATAAGCTATAAGAAGATA+TGG | + | 51719:929-948 | MS.gene25689:intron | 20.0% |
| !! | ATCAACAGGAAAATTATAAA+AGG | - | 51719:2525-2544 | MS.gene25689:intergenic | 20.0% |
| !! | ATCTTATTCAAGATATTTCT+GGG | + | 51719:3422-3441 | MS.gene25689:intron | 20.0% |
| !! | ATTATACTACAAAATCAGTA+TGG | + | 51719:2273-2292 | MS.gene25689:intron | 20.0% |
| !! | CAAAACAAGATCAATAAAAT+GGG | - | 51719:1668-1687 | MS.gene25689:intergenic | 20.0% |
| !! | GTTTATGGCTAAAATTTAAA+AGG | - | 51719:2029-2048 | MS.gene25689:intergenic | 20.0% |
| !! | TAACAAAATATAGATTACAC+AGG | - | 51719:1764-1783 | MS.gene25689:intergenic | 20.0% |
| !! | TATATTAATGTATTTACGGT+GGG | + | 51719:4273-4292 | MS.gene25689:intron | 20.0% |
| !! | TCGATAATTATTGAAGATTA+TGG | + | 51719:2380-2399 | MS.gene25689:intron | 20.0% |
| !! | TTATACTACAAAATCAGTAT+GGG | + | 51719:2274-2293 | MS.gene25689:intron | 20.0% |
| !! | TTATATTAATGTATTTACGG+TGG | + | 51719:4272-4291 | MS.gene25689:intron | 20.0% |
| !!! | ATTAATTTACTACCCTTTTT+AGG | + | 51719:5333-5352 | MS.gene25689:intron | 20.0% |
| !!! | ATTTTGAATTTTGATGACTT+TGG | + | 51719:1062-1081 | MS.gene25689:intron | 20.0% |
| !!! | CTTGATTATATATTTTACAC+AGG | + | 51719:5920-5939 | MS.gene25689:CDS | 20.0% |
| !!! | GGTCCTAATTTTATATTTAT+TGG | + | 51719:5744-5763 | MS.gene25689:intron | 20.0% |
| !!! | TATCAGAAATCTGTTTTTAA+AGG | + | 51719:5494-5513 | MS.gene25689:intron | 20.0% |
| !!! | TTTTGAATTTTGATGACTTT+GGG | + | 51719:1063-1082 | MS.gene25689:intron | 20.0% |
| ! | AAAAACATCTATGTTAAGAC+TGG | - | 51719:3835-3854 | MS.gene25689:intergenic | 25.0% |
| ! | AAAATTAGGACCAAAAATTG+AGG | - | 51719:5736-5755 | MS.gene25689:intergenic | 25.0% |
| ! | AAACAAGATCAATAAAATGG+GGG | - | 51719:1666-1685 | MS.gene25689:intergenic | 25.0% |
| ! | AAAGAAAAAGAAAATTGGAC+AGG | - | 51719:3901-3920 | MS.gene25689:intergenic | 25.0% |
| ! | AAAGAAAACTTTGTAAGTAC+AGG | - | 51719:4611-4630 | MS.gene25689:intergenic | 25.0% |
| ! | AAATACAACATCTTCAAATG+AGG | - | 51719:5097-5116 | MS.gene25689:intergenic | 25.0% |
| ! | AATAACATTTATATACCTCC+TGG | - | 51719:3345-3364 | MS.gene25689:intergenic | 25.0% |
| ! | ACCAAAAAAAGAAAAAAGCA+TGG | - | 51719:5129-5148 | MS.gene25689:intergenic | 25.0% |
| ! | AGTGTATGTTAGACAAAATA+AGG | + | 51719:3517-3536 | MS.gene25689:intron | 25.0% |
| ! | AGTTAATGAAAATGGAAATG+AGG | + | 51719:2790-2809 | MS.gene25689:CDS | 25.0% |
| ! | ATGAAGTTATTTATCCAAAC+AGG | - | 51719:864-883 | MS.gene25689:intergenic | 25.0% |
| ! | ATTATTAGAGTTATTGGATG+AGG | + | 51719:6047-6066 | MS.gene25689:CDS | 25.0% |
| ! | ATTCTATCACAAAATGACTA+AGG | - | 51719:3999-4018 | MS.gene25689:intergenic | 25.0% |
| ! | ATTGAAGATTATGGCATTAT+GGG | + | 51719:2389-2408 | MS.gene25689:intron | 25.0% |
| ! | CATCTTATTCAAGATATTTC+TGG | + | 51719:3421-3440 | MS.gene25689:intron | 25.0% |
| ! | CCAAACATTCACTAAATAAA+AGG | - | 51719:5996-6015 | MS.gene25689:intergenic | 25.0% |
| ! | CTAGTGACATTTGTAAATAA+AGG | - | 51719:5884-5903 | MS.gene25689:intergenic | 25.0% |
| ! | GTAATTGTATAGATCATTTG+AGG | - | 51719:3236-3255 | MS.gene25689:intergenic | 25.0% |
| ! | GTGTATGTTAGACAAAATAA+GGG | + | 51719:3518-3537 | MS.gene25689:intron | 25.0% |
| ! | GTTACTTGAAAAGGATAAAT+AGG | + | 51719:3616-3635 | MS.gene25689:intron | 25.0% |
| ! | GTTGCATCTTATATTCTAAT+AGG | + | 51719:4069-4088 | MS.gene25689:intron | 25.0% |
| ! | TAAGAGTAACAAATAAAAGC+AGG | - | 51719:4745-4764 | MS.gene25689:intergenic | 25.0% |
| ! | TACAACTAAAAACAGGAAAA+TGG | - | 51719:4858-4877 | MS.gene25689:intergenic | 25.0% |
| ! | TATACTACAAAATCAGTATG+GGG | + | 51719:2275-2294 | MS.gene25689:intron | 25.0% |
| ! | TATTGAAGATTATGGCATTA+TGG | + | 51719:2388-2407 | MS.gene25689:intron | 25.0% |
| ! | TCACTAAATAAAAGGCAAAT+AGG | - | 51719:5988-6007 | MS.gene25689:intergenic | 25.0% |
| ! | TGAAGTTATTTATCCAAACA+GGG | - | 51719:863-882 | MS.gene25689:intergenic | 25.0% |
| ! | TGCATTCAAAATAAACACAT+CGG | - | 51719:5307-5326 | MS.gene25689:intergenic | 25.0% |
| ! | TGTTGCAGAAATTTAATTAG+TGG | + | 51719:2428-2447 | MS.gene25689:intron | 25.0% |
| ! | TGTTTCAACAAACATATTGA+CGG | - | 51719:1616-1635 | MS.gene25689:intergenic | 25.0% |
| ! | TTGGGAGATTTAATAATTCT+GGG | + | 51719:2825-2844 | MS.gene25689:CDS | 25.0% |
| ! | TTTATTTAGTGAATGTTTGG+TGG | + | 51719:5996-6015 | MS.gene25689:intron | 25.0% |
| ! | TTTGGGAGATTTAATAATTC+TGG | + | 51719:2824-2843 | MS.gene25689:CDS | 25.0% |
| !! | AACTTTTATATCAGATCAAC+AGG | - | 51719:2539-2558 | MS.gene25689:intergenic | 25.0% |
| !! | AATGTCACTAGAGATTTTAT+TGG | + | 51719:5893-5912 | MS.gene25689:CDS | 25.0% |
| !! | AGTCTTAACATAGATGTTTT+TGG | + | 51719:3834-3853 | MS.gene25689:intron | 25.0% |
| !! | TAATATTATGTACCTTTTCC+AGG | + | 51719:5686-5705 | MS.gene25689:intron | 25.0% |
| !! | TTTGTTCTCATTTTGTAATC+TGG | + | 51719:3736-3755 | MS.gene25689:intron | 25.0% |
| !!! | AAACAATTATTTTGAGACAG+AGG | - | 51719:1279-1298 | MS.gene25689:intergenic | 25.0% |
| !!! | AAAGGTATTCTAGATCAAAT+TGG | - | 51719:2507-2526 | MS.gene25689:intergenic | 25.0% |
| !!! | AACAATTATTTTGAGACAGA+GGG | - | 51719:1278-1297 | MS.gene25689:intergenic | 25.0% |
| !!! | ATTGAGTTGAGTTAGATTAA+CGG | - | 51719:4034-4053 | MS.gene25689:intergenic | 25.0% |
| !!! | CCTTTTATTTAGTGAATGTT+TGG | + | 51719:5993-6012 | MS.gene25689:intron | 25.0% |
| !!! | TCCATGCTTTTTTCTTTTTT+TGG | + | 51719:5125-5144 | MS.gene25689:intron | 25.0% |
| !!! | TGCTTTTATTTGTTACTCTT+AGG | + | 51719:4744-4763 | MS.gene25689:intron | 25.0% |
| !!! | TGTTGGTTAATTACATTTTC+AGG | + | 51719:5775-5794 | MS.gene25689:intron | 25.0% |
| !!! | TTATAACTGTCGTTTTTTGA+TGG | + | 51719:2219-2238 | MS.gene25689:intron | 25.0% |
| !!! | TTTTATTTGTTACTCTTAGG+TGG | + | 51719:4747-4766 | MS.gene25689:intron | 25.0% |
| AAATGTCCACCAAGATTTAA+AGG | + | 51719:5233-5252 | MS.gene25689:CDS | 30.0% | |
| AATAGAAACGAAGACTATTC+TGG | + | 51719:4972-4991 | MS.gene25689:intron | 30.0% | |
| ACAAAATGACTAAGGTTAAC+TGG | - | 51719:3991-4010 | MS.gene25689:intergenic | 30.0% | |
| ACATACACTCTTCTAACTAA+TGG | - | 51719:3506-3525 | MS.gene25689:intergenic | 30.0% | |
| AGAAATATGAGGTTGGAATT+TGG | + | 51719:4376-4395 | MS.gene25689:intron | 30.0% | |
| AGAAGAAAATTGCCTTGAAT+CGG | + | 51719:4518-4537 | MS.gene25689:CDS | 30.0% | |
| AGACAAAATAAGGGACTTAA+AGG | + | 51719:3527-3546 | MS.gene25689:intron | 30.0% | |
| AGAGAAATTCTATATCCTGT+TGG | - | 51719:2053-2072 | MS.gene25689:intergenic | 30.0% | |
| AGATTTAATAATTCTGGGTC+TGG | + | 51719:2830-2849 | MS.gene25689:CDS | 30.0% | |
| ATTTGTGAATGAACTCAAGT+AGG | + | 51719:3928-3947 | MS.gene25689:intron | 30.0% | |
| CATACACTCTTCTAACTAAT+GGG | - | 51719:3505-3524 | MS.gene25689:intergenic | 30.0% | |
| CTAAAAACAGGAAAATGGAA+AGG | - | 51719:4853-4872 | MS.gene25689:intergenic | 30.0% | |
| CTACAACACACTCAAATTTA+AGG | - | 51719:3021-3040 | MS.gene25689:intergenic | 30.0% | |
| GAAAACATAGCTGCAATATT+TGG | - | 51719:4566-4585 | MS.gene25689:intergenic | 30.0% | |
| GAAATCTCAATTCATACTGA+TGG | - | 51719:1242-1261 | MS.gene25689:intergenic | 30.0% | |
| GACAAAATAAGGGACTTAAA+GGG | + | 51719:3528-3547 | MS.gene25689:intron | 30.0% | |
| GATTTAATAATTCTGGGTCT+GGG | + | 51719:2831-2850 | MS.gene25689:CDS | 30.0% | |
| GCATAGAAAAGTAAAGTAGA+AGG | - | 51719:1787-1806 | MS.gene25689:intergenic | 30.0% | |
| GGAGTCATTATTAGAGTTAT+TGG | + | 51719:6041-6060 | MS.gene25689:CDS | 30.0% | |
| GGCAACATAAATACAATTGA+TGG | + | 51719:4312-4331 | MS.gene25689:CDS | 30.0% | |
| TAATGAAAATGGAAATGAGG+AGG | + | 51719:2793-2812 | MS.gene25689:CDS | 30.0% | |
| TACATGGTACAACTAAAAAC+AGG | - | 51719:4865-4884 | MS.gene25689:intergenic | 30.0% | |
| TCGTTATCCAAAGAAAATAC+TGG | - | 51719:1706-1725 | MS.gene25689:intergenic | 30.0% | |
| TGCTGTATTTCATATTGTGT+AGG | + | 51719:3665-3684 | MS.gene25689:intron | 30.0% | |
| TGGAAGTTAGTTACTTGAAA+AGG | + | 51719:3607-3626 | MS.gene25689:intron | 30.0% | |
| TTACAAGAGAAAAACAAACG+AGG | + | 51719:4194-4213 | MS.gene25689:CDS | 30.0% | |
| TTATTCTTCGTTTGCAAGAA+CGG | + | 51719:5805-5824 | MS.gene25689:CDS | 30.0% | |
| TTCTTGTGTATTGTCAGTAA+AGG | + | 51719:4938-4957 | MS.gene25689:intron | 30.0% | |
| TTTGTACTGTTCACAAGAAA+TGG | - | 51719:3792-3811 | MS.gene25689:intergenic | 30.0% | |
| ! | GTTAATGCCAGTATTTTCTT+TGG | + | 51719:1696-1715 | MS.gene25689:intron | 30.0% |
| ! | TGAATCCTACATTTTCTGTT+AGG | + | 51719:2184-2203 | MS.gene25689:intron | 30.0% |
| !! | AACTTGTTACGAGAAATAGT+TGG | + | 51719:3295-3314 | MS.gene25689:CDS | 30.0% |
| !! | ACAATATCATTTGATTTGGC+AGG | + | 51719:2582-2601 | MS.gene25689:intron | 30.0% |
| !! | AGGGAGTATATGTTTAGTTT+TGG | + | 51719:1535-1554 | MS.gene25689:intron | 30.0% |
| !! | TTGAGTTGAGTTAGATTAAC+GGG | - | 51719:4033-4052 | MS.gene25689:intergenic | 30.0% |
| !!! | GGGAGTATATGTTTAGTTTT+GGG | + | 51719:1536-1555 | MS.gene25689:intron | 30.0% |
| !!! | GTATATGTTTAGTTTTGGGT+TGG | + | 51719:1540-1559 | MS.gene25689:intron | 30.0% |
| !!! | TTCTTTAGAGTTTTTGTCGT+TGG | + | 51719:1203-1222 | MS.gene25689:intron | 30.0% |
| AAAATGACCATCTAATGGAG+CGG | - | 51719:792-811 | None:intergenic | 35.0% | |
| AAACACTATACTAACTTCCC+GGG | + | 51719:3075-3094 | MS.gene25689:CDS | 35.0% | |
| AAACGACTGTTATGTTGAGA+CGG | + | 51719:1512-1531 | MS.gene25689:intron | 35.0% | |
| AAGAGATAATGCTATATGCG+TGG | + | 51719:5038-5057 | MS.gene25689:intron | 35.0% | |
| AATGATTCAGCATGCTTGTT+GGG | + | 51719:2321-2340 | MS.gene25689:intron | 35.0% | |
| ACAAACATATTGACGGTGAA+TGG | - | 51719:1609-1628 | MS.gene25689:intergenic | 35.0% | |
| ACAACTGTTTCACAACGAAA+TGG | + | 51719:2926-2945 | MS.gene25689:CDS | 35.0% | |
| ACAGGAGTTATTTAGAAGAG+TGG | + | 51719:3587-3606 | MS.gene25689:intron | 35.0% | |
| ACTGATATCATTGTGGAGAA+TGG | + | 51719:2076-2095 | MS.gene25689:intron | 35.0% | |
| AGATGCAACATACAAATACG+AGG | - | 51719:4058-4077 | MS.gene25689:intergenic | 35.0% | |
| AGGTTTGTGCACGATATTTA+AGG | - | 51719:1491-1510 | MS.gene25689:intergenic | 35.0% | |
| ATTATTGTTTGCTTGCTTGC+AGG | + | 51719:4441-4460 | MS.gene25689:intron | 35.0% | |
| ATTTAAAGGATGTCAAGCTC+TGG | + | 51719:5247-5266 | MS.gene25689:CDS | 35.0% | |
| CAAACACTATACTAACTTCC+CGG | + | 51719:3074-3093 | MS.gene25689:CDS | 35.0% | |
| CAAACATATTGACGGTGAAT+GGG | - | 51719:1608-1627 | MS.gene25689:intergenic | 35.0% | |
| CATATTGTGTAGGAGAGAAA+AGG | + | 51719:3675-3694 | MS.gene25689:intron | 35.0% | |
| CATGTGAAGAAATATGAGGT+TGG | + | 51719:4369-4388 | MS.gene25689:intron | 35.0% | |
| CCATACCTAACAGAAAATGT+AGG | - | 51719:2192-2211 | MS.gene25689:intergenic | 35.0% | |
| CGCAAAAAATGACCATCTAA+TGG | - | 51719:797-816 | MS.gene25689:intergenic | 35.0% | |
| CTCAACATAACAGTCGTTTA+AGG | - | 51719:1511-1530 | MS.gene25689:intergenic | 35.0% | |
| CTCACATGTGAAGAAATATG+AGG | + | 51719:4365-4384 | MS.gene25689:CDS | 35.0% | |
| CTCCTGGAGACAAATAATAT+CGG | - | 51719:3329-3348 | MS.gene25689:intergenic | 35.0% | |
| CTCTTTCACTGATATCATTG+TGG | + | 51719:2069-2088 | MS.gene25689:intron | 35.0% | |
| GCAAGTGCAGTTAATGAAAA+TGG | + | 51719:2782-2801 | MS.gene25689:CDS | 35.0% | |
| GCTTGACATCCTTTAAATCT+TGG | - | 51719:5245-5264 | MS.gene25689:intergenic | 35.0% | |
| GTTGGAAGTAGGCATAATAT+AGG | + | 51719:1558-1577 | MS.gene25689:intron | 35.0% | |
| TAAGAGAGCTATATGATCTG+AGG | - | 51719:6115-6134 | MS.gene25689:intergenic | 35.0% | |
| TCGTGTACAGAGTGATAAAA+AGG | + | 51719:2607-2626 | MS.gene25689:CDS | 35.0% | |
| TGACATCCTTTAAATCTTGG+TGG | - | 51719:5242-5261 | MS.gene25689:intergenic | 35.0% | |
| TGGAGATTTCAATTCAGTTC+CGG | + | 51719:5420-5439 | MS.gene25689:CDS | 35.0% | |
| TTTCGTTGTGAAACAGTTGT+AGG | - | 51719:2926-2945 | MS.gene25689:intergenic | 35.0% | |
| ! | ATGTTGCCTTTGGTATTTTG+TGG | + | 51719:3875-3894 | MS.gene25689:intron | 35.0% |
| ! | CAGCTTATCAGGTTTTTCTT+CGG | + | 51719:1139-1158 | MS.gene25689:intron | 35.0% |
| ! | CCTACATTTTCTGTTAGGTA+TGG | + | 51719:2189-2208 | MS.gene25689:intron | 35.0% |
| ! | CTATATCCTGTTGGTGTTTA+TGG | - | 51719:2044-2063 | MS.gene25689:intergenic | 35.0% |
| ! | TGAGTTGAGTTAGATTAACG+GGG | - | 51719:4032-4051 | MS.gene25689:intergenic | 35.0% |
| ! | TGGTAATGTATAGCAACACT+TGG | + | 51719:5652-5671 | MS.gene25689:intron | 35.0% |
| ! | TGTGCTCTTTCCTCAATTTT+TGG | + | 51719:5723-5742 | MS.gene25689:intron | 35.0% |
| ! | TTATCAGGTTTTTCTTCGGT+TGG | + | 51719:1143-1162 | MS.gene25689:intron | 35.0% |
| ! | TTCTGAAAGTCATTGCTTCT+TGG | + | 51719:4583-4602 | MS.gene25689:intron | 35.0% |
| ! | TTTTAGCCATAAACACCAAC+AGG | + | 51719:2035-2054 | MS.gene25689:intron | 35.0% |
| !! | AACAAGTTTTGTCTGCGATA+CGG | - | 51719:3283-3302 | MS.gene25689:intergenic | 35.0% |
| !! | CAATGGTAACTTTTGGAAAC+AGG | - | 51719:2704-2723 | MS.gene25689:intergenic | 35.0% |
| !! | TACTCTCTAAAACATTTGCG+AGG | - | 51719:3701-3720 | MS.gene25689:intergenic | 35.0% |
| !! | TCAAGTAGGTGGATTCTTTT+GGG | + | 51719:3942-3961 | MS.gene25689:intron | 35.0% |
| !! | TCGTGTTGGTTTGTACAAAT+GGG | + | 51719:2111-2130 | MS.gene25689:intron | 35.0% |
| !! | TTCGTGTTGGTTTGTACAAA+TGG | + | 51719:2110-2129 | MS.gene25689:intron | 35.0% |
| !! | TTGGTTTGTACAAATGGGAT+TGG | + | 51719:2116-2135 | MS.gene25689:intron | 35.0% |
| !!! | GTCATTTTTTGCGCTATAAG+TGG | + | 51719:804-823 | MS.gene25689:CDS | 35.0% |
| !!! | TTTAGTTTTGGGTTGGAAGT+AGG | + | 51719:1547-1566 | MS.gene25689:intron | 35.0% |
| !!! | TTTTAGCCTTAAGACAACCT+AGG | - | 51719:2679-2698 | MS.gene25689:intergenic | 35.0% |
| AAATCTCCACAAACCAGCAT+TGG | - | 51719:5409-5428 | MS.gene25689:intergenic | 40.0% | |
| ACGAAGCATGACAGTAGAAA+AGG | - | 51719:4908-4927 | MS.gene25689:intergenic | 40.0% | |
| ACTGTTTCACAACGAAATGG+CGG | + | 51719:2929-2948 | MS.gene25689:CDS | 40.0% | |
| AGAAACACTTTGGACTGCAA+TGG | - | 51719:2721-2740 | MS.gene25689:intergenic | 40.0% | |
| ATACAATTACTGCCCGTCAT+GGG | + | 51719:3246-3265 | MS.gene25689:CDS | 40.0% | |
| ATACTGCAAAGGATAAGACC+TGG | - | 51719:1922-1941 | MS.gene25689:intergenic | 40.0% | |
| ATATGATCTGAGGACCATTC+AGG | - | 51719:6105-6124 | MS.gene25689:intergenic | 40.0% | |
| ATCATTGTGGAGAATGGAGA+TGG | + | 51719:2082-2101 | MS.gene25689:intron | 40.0% | |
| ATCCAAACAGGGCTTAAAAG+AGG | - | 51719:852-871 | MS.gene25689:intergenic | 40.0% | |
| ATTTCAATTCAGTTCCGGGA+AGG | + | 51719:5425-5444 | MS.gene25689:CDS | 40.0% | |
| CAATGATTCAGCATGCTTGT+TGG | + | 51719:2320-2339 | MS.gene25689:intron | 40.0% | |
| CAGAGACAAAACTTACTGTG+GGG | + | 51719:3047-3066 | MS.gene25689:CDS | 40.0% | |
| CATGCATCTGAGAAACACTT+TGG | - | 51719:2731-2750 | MS.gene25689:intergenic | 40.0% | |
| CATGTGAGAATCTGTCTCTA+CGG | - | 51719:4353-4372 | MS.gene25689:intergenic | 40.0% | |
| CCAGTATCTATCAGCTTATC+AGG | + | 51719:1128-1147 | MS.gene25689:intron | 40.0% | |
| CCTACAATGGGAATATCAGA+AGG | - | 51719:698-717 | MS.gene25689:intergenic | 40.0% | |
| CCTGATAAGCTGATAGATAC+TGG | - | 51719:1131-1150 | MS.gene25689:intergenic | 40.0% | |
| CCTTCTGATATTCCCATTGT+AGG | + | 51719:695-714 | MS.gene25689:CDS | 40.0% | |
| CGAAGCATGACAGTAGAAAA+GGG | - | 51719:4907-4926 | MS.gene25689:intergenic | 40.0% | |
| CGATATTATTTGTCTCCAGG+AGG | + | 51719:3327-3346 | MS.gene25689:CDS | 40.0% | |
| CGTGCTAAGATTGTAGTTTC+TGG | + | 51719:1731-1750 | MS.gene25689:intron | 40.0% | |
| CTAGTGCTAACCTGACAAAT+GGG | + | 51719:2885-2904 | MS.gene25689:CDS | 40.0% | |
| CTGGACAAACATGGCTATTA+CGG | + | 51719:4168-4187 | MS.gene25689:CDS | 40.0% | |
| GAGAAAAACAAACGAGGTTG+TGG | + | 51719:4200-4219 | MS.gene25689:intron | 40.0% | |
| GCACACTCTCTTAAAAGGAT+TGG | + | 51719:5357-5376 | MS.gene25689:CDS | 40.0% | |
| GCAGAGACAAAACTTACTGT+GGG | + | 51719:3046-3065 | MS.gene25689:CDS | 40.0% | |
| GCATAATATAGGTGTTCAGC+GGG | + | 51719:1569-1588 | MS.gene25689:intron | 40.0% | |
| GGAGACAAATAATATCGGCA+CGG | - | 51719:3324-3343 | MS.gene25689:intergenic | 40.0% | |
| GGAGATTTCAATTCAGTTCC+GGG | + | 51719:5421-5440 | MS.gene25689:CDS | 40.0% | |
| GGCATAATATAGGTGTTCAG+CGG | + | 51719:1568-1587 | MS.gene25689:intron | 40.0% | |
| GGCATTATGGGCCAAAATTT+GGG | + | 51719:2401-2420 | MS.gene25689:intron | 40.0% | |
| GGGAGACTATCAATCTCATA+TGG | - | 51719:3485-3504 | MS.gene25689:intergenic | 40.0% | |
| GTGGGTTCACAGGTATATAA+TGG | + | 51719:4291-4310 | MS.gene25689:intron | 40.0% | |
| TACTGCAAAGGATAAGACCT+GGG | - | 51719:1921-1940 | MS.gene25689:intergenic | 40.0% | |
| TAGGTGCACACTCTCTTAAA+AGG | + | 51719:5352-5371 | MS.gene25689:intron | 40.0% | |
| TATACAATTACTGCCCGTCA+TGG | + | 51719:3245-3264 | MS.gene25689:CDS | 40.0% | |
| TATACATTACCAGTGGCAAC+TGG | - | 51719:5644-5663 | MS.gene25689:intergenic | 40.0% | |
| TATCTTCACATTCATGTCCC+AGG | + | 51719:1901-1920 | MS.gene25689:intron | 40.0% | |
| TATTGGATGAGGAGAGTTTG+AGG | + | 51719:6058-6077 | MS.gene25689:CDS | 40.0% | |
| TCCAAACAGGGCTTAAAAGA+GGG | - | 51719:851-870 | MS.gene25689:intergenic | 40.0% | |
| TCTAGTGCTAACCTGACAAA+TGG | + | 51719:2884-2903 | MS.gene25689:CDS | 40.0% | |
| TGAAAATGGAAATGAGGAGG+AGG | + | 51719:2796-2815 | MS.gene25689:CDS | 40.0% | |
| TGCAGAGACAAAACTTACTG+TGG | + | 51719:3045-3064 | MS.gene25689:CDS | 40.0% | |
| TGCCGATATTATTTGTCTCC+AGG | + | 51719:3324-3343 | MS.gene25689:CDS | 40.0% | |
| TGGCATTATGGGCCAAAATT+TGG | + | 51719:2400-2419 | MS.gene25689:intron | 40.0% | |
| TGTGAATGAACTCAAGTAGG+TGG | + | 51719:3931-3950 | MS.gene25689:intron | 40.0% | |
| TTGGATATGAGCAGCATAAG+CGG | + | 51719:5834-5853 | MS.gene25689:CDS | 40.0% | |
| TTGTCTACTCATGCCTTCAA+GGG | + | 51719:4772-4791 | MS.gene25689:intron | 40.0% | |
| ! | AAGAGAGTGTGCACCTAAAA+AGG | - | 51719:5349-5368 | MS.gene25689:intergenic | 40.0% |
| ! | ACTAACTCTCATGTTGCTTG+TGG | + | 51719:5189-5208 | MS.gene25689:intron | 40.0% |
| ! | AGAGAGTGTGCACCTAAAAA+GGG | - | 51719:5348-5367 | MS.gene25689:intergenic | 40.0% |
| ! | AGGAAAGAGCACAATTACAG+TGG | - | 51719:5716-5735 | MS.gene25689:intergenic | 40.0% |
| ! | ATTTATTGGTTGTGGGCTGT+TGG | + | 51719:5758-5777 | MS.gene25689:intron | 40.0% |
| ! | CAAAGTGTTTCTCAGATGCA+TGG | + | 51719:2729-2748 | MS.gene25689:CDS | 40.0% |
| ! | CAAGGCAATTTTCTTCTGAG+TGG | - | 51719:4515-4534 | MS.gene25689:intergenic | 40.0% |
| ! | CTAACTCTCATGTTGCTTGT+GGG | + | 51719:5190-5209 | MS.gene25689:intron | 40.0% |
| ! | CTTGCAGGTTGAGTTTAACA+AGG | + | 51719:4456-4475 | MS.gene25689:intron | 40.0% |
| ! | CTTTTCCCTGGATTATCAAC+AGG | - | 51719:4692-4711 | MS.gene25689:intergenic | 40.0% |
| ! | GCAATTTTCTTCTGAGTGGT+TGG | - | 51719:4511-4530 | MS.gene25689:intergenic | 40.0% |
| ! | GGAAAGAGCACAATTACAGT+GGG | - | 51719:5715-5734 | MS.gene25689:intergenic | 40.0% |
| ! | GGAGATGGATATTTTCGTGT+TGG | + | 51719:2097-2116 | MS.gene25689:intron | 40.0% |
| ! | GGTGAAACTTGGTTTGAAGT+TGG | + | 51719:2950-2969 | MS.gene25689:CDS | 40.0% |
| ! | GTGTTGCTATACATTACCAG+TGG | - | 51719:5651-5670 | MS.gene25689:intergenic | 40.0% |
| ! | TGAATGTTTGGTGGTTTCAG+CGG | + | 51719:6005-6024 | MS.gene25689:intron | 40.0% |
| ! | TGAATTTTTCGCTCCTGAAC+TGG | + | 51719:4149-4168 | MS.gene25689:CDS | 40.0% |
| ! | TGGACTGCAATGGTAACTTT+TGG | - | 51719:2711-2730 | MS.gene25689:intergenic | 40.0% |
| ! | TGTTGGGTGACATCTTTTTC+TGG | + | 51719:2337-2356 | MS.gene25689:intron | 40.0% |
| !! | AATCAGCCTGTTGATAATCC+AGG | + | 51719:4683-4702 | MS.gene25689:CDS | 40.0% |
| !! | ATCAGCCTGTTGATAATCCA+GGG | + | 51719:4684-4703 | MS.gene25689:CDS | 40.0% |
| !! | CTCAAGTAGGTGGATTCTTT+TGG | + | 51719:3941-3960 | MS.gene25689:intron | 40.0% |
| !! | CTGTTGATAATCCAGGGAAA+AGG | + | 51719:4690-4709 | MS.gene25689:CDS | 40.0% |
| !! | TGGTGAATCAATTTGCTGTG+AGG | - | 51719:5624-5643 | MS.gene25689:intergenic | 40.0% |
| !! | TGGTTTAGTTCTTTCCCCAT+TGG | + | 51719:3756-3775 | MS.gene25689:intron | 40.0% |
| AAATGGAAATGAGGAGGAGG+AGG | + | 51719:2799-2818 | MS.gene25689:CDS | 45.0% | |
| AAATGGTTGAGCTCTGCCAA+TGG | - | 51719:3775-3794 | MS.gene25689:intergenic | 45.0% | |
| AACGAAATGGCGGTGAAACT+TGG | + | 51719:2939-2958 | MS.gene25689:CDS | 45.0% | |
| AATGGTTGAGCTCTGCCAAT+GGG | - | 51719:3774-3793 | MS.gene25689:intergenic | 45.0% | |
| ACCAAAGGCAACATCAGTCA+AGG | - | 51719:3869-3888 | MS.gene25689:intergenic | 45.0% | |
| ACCAATGTCATCAGCTGATG+GGG | - | 51719:2993-3012 | MS.gene25689:intergenic | 45.0% | |
| ACCTTGACTGATGTTGCCTT+TGG | + | 51719:3865-3884 | MS.gene25689:intron | 45.0% | |
| AGTGGGTCAACTGCTAAATC+AGG | - | 51719:5588-5607 | MS.gene25689:intergenic | 45.0% | |
| ATGGGTAGTTTGGATGTGGA+CGG | + | 51719:3148-3167 | MS.gene25689:CDS | 45.0% | |
| CATTAACTGCACTTGCAGCA+CGG | - | 51719:2778-2797 | MS.gene25689:intergenic | 45.0% | |
| CATTGGAATGTCTGCACTGA+CGG | - | 51719:5392-5411 | MS.gene25689:intergenic | 45.0% | |
| CCTCATGCACTTCTTGCAAT+GGG | + | 51719:5543-5562 | MS.gene25689:CDS | 45.0% | |
| CTGGCTAATGCAGTATTGCA+TGG | + | 51719:1872-1891 | MS.gene25689:intron | 45.0% | |
| CTTCTGAGTGGTTGGAATCA+TGG | - | 51719:4503-4522 | MS.gene25689:intergenic | 45.0% | |
| CTTGTCTACTCATGCCTTCA+AGG | + | 51719:4771-4790 | MS.gene25689:intron | 45.0% | |
| GAAAAGGCAACTTCTGTGTG+TGG | + | 51719:4706-4725 | MS.gene25689:CDS | 45.0% | |
| GAAAATTGCCTTGAATCGGC+TGG | + | 51719:4522-4541 | MS.gene25689:CDS | 45.0% | |
| GACAGGCCACAAAATACCAA+AGG | - | 51719:3884-3903 | MS.gene25689:intergenic | 45.0% | |
| GACCAATGTCATCAGCTGAT+GGG | - | 51719:2994-3013 | MS.gene25689:intergenic | 45.0% | |
| GACTATTCTGGCAACTTCTG+AGG | + | 51719:4984-5003 | MS.gene25689:intron | 45.0% | |
| GACTGTTATGTTGAGACGGA+GGG | + | 51719:1516-1535 | MS.gene25689:intron | 45.0% | |
| GAGAAGCAATCAAACCTTCC+CGG | - | 51719:5442-5461 | MS.gene25689:intergenic | 45.0% | |
| GAGGACGCAATATGTTGAGT+GGG | - | 51719:5605-5624 | MS.gene25689:intergenic | 45.0% | |
| GCTATCATTGAAGCAGCAAC+AGG | + | 51719:3569-3588 | MS.gene25689:intron | 45.0% | |
| GCTGCTGCAAAAATAAACCC+AGG | + | 51719:6145-6164 | MS.gene25689:CDS | 45.0% | |
| GTCAACTGCTAAATCAGGGT+GGG | - | 51719:5583-5602 | MS.gene25689:intergenic | 45.0% | |
| GTGGGTCAACTGCTAAATCA+GGG | - | 51719:5587-5606 | MS.gene25689:intergenic | 45.0% | |
| TAGCCATGTTTGTCCAGTTC+AGG | - | 51719:4165-4184 | MS.gene25689:intergenic | 45.0% | |
| TCCTCATGCACTTCTTGCAA+TGG | + | 51719:5542-5561 | MS.gene25689:CDS | 45.0% | |
| TCTTCGTTTGCAAGAACGGT+TGG | + | 51719:5809-5828 | MS.gene25689:CDS | 45.0% | |
| TGACCAATGTCATCAGCTGA+TGG | - | 51719:2995-3014 | MS.gene25689:intergenic | 45.0% | |
| TGAGGACGCAATATGTTGAG+TGG | - | 51719:5606-5625 | MS.gene25689:intergenic | 45.0% | |
| TGTCTACTCATGCCTTCAAG+GGG | + | 51719:4773-4792 | MS.gene25689:intron | 45.0% | |
| TGTGCACACTGATACTGCAA+AGG | - | 51719:1933-1952 | MS.gene25689:intergenic | 45.0% | |
| TTAGCCAGTGAAGTACACAC+AGG | - | 51719:1860-1879 | MS.gene25689:intergenic | 45.0% | |
| TTCTCCTGTGTGTACTTCAC+TGG | + | 51719:1853-1872 | MS.gene25689:intron | 45.0% | |
| ! | ACCATCTAATGGAGCGGATT+CGG | - | 51719:786-805 | MS.gene25689:intergenic | 45.0% |
| ! | ATTGATTCACCAGTTGCCAC+TGG | + | 51719:5632-5651 | MS.gene25689:CDS | 45.0% |
| ! | TACCTTAACCAGCCGATTCA+AGG | - | 51719:4533-4552 | MS.gene25689:intergenic | 45.0% |
| ! | TCATGTTGCTTGTGGGCTTT+AGG | + | 51719:5197-5216 | MS.gene25689:intron | 45.0% |
| ! | TCCCTCTTTTAAGCCCTGTT+TGG | + | 51719:847-866 | MS.gene25689:intron | 45.0% |
| ! | TGCAACACTCGCCCAAATTT+TGG | - | 51719:2415-2434 | MS.gene25689:intergenic | 45.0% |
| ! | TGTATTTACGGTGGGTTCAC+AGG | + | 51719:4281-4300 | MS.gene25689:intron | 45.0% |
| ! | TTCAGCGGATTCATTGGTTG+TGG | + | 51719:6020-6039 | MS.gene25689:intron | 45.0% |
| !! | AATGAGGAGGAGGAGGTATT+TGG | + | 51719:2806-2825 | MS.gene25689:CDS | 45.0% |
| !! | ATGAGGAGGAGGAGGTATTT+GGG | + | 51719:2807-2826 | MS.gene25689:CDS | 45.0% |
| !! | GACATTCCAATGCTGGTTTG+TGG | + | 51719:5400-5419 | MS.gene25689:CDS | 45.0% |
| !! | TTTGCAAGAACGGTTGGTCT+TGG | + | 51719:5815-5834 | MS.gene25689:CDS | 45.0% |
| !!! | TTTTTATATTAATGTATTTA+CGG | + | 51719:4269-4288 | MS.gene25689:intron | 5.0% |
| AAACTACCCATCGCGTCAAC+AGG | - | 51719:3139-3158 | MS.gene25689:intergenic | 50.0% | |
| ACCCCATCAGCTGATGACAT+TGG | + | 51719:2989-3008 | MS.gene25689:CDS | 50.0% | |
| ACTGATACCTGTTGACGCGA+TGG | + | 51719:3129-3148 | MS.gene25689:CDS | 50.0% | |
| ACTGCTAAATCAGGGTGGGA+TGG | - | 51719:5579-5598 | MS.gene25689:intergenic | 50.0% | |
| AGAAGCAGACGAGGATAAGC+TGG | - | 51719:2867-2886 | MS.gene25689:intergenic | 50.0% | |
| ATCACCCCACCACAATACCA+CGG | - | 51719:3968-3987 | MS.gene25689:intergenic | 50.0% | |
| ATGGTTGAGCTCTGCCAATG+GGG | - | 51719:3773-3792 | MS.gene25689:intergenic | 50.0% | |
| CAACAGGTATCAGTTGGCGA+GGG | - | 51719:3123-3142 | MS.gene25689:intergenic | 50.0% | |
| CACAATTACAGTGGGAGACC+TGG | - | 51719:5707-5726 | MS.gene25689:intergenic | 50.0% | |
| CAGCACGGTCATGTAAGACT+CGG | - | 51719:2763-2782 | MS.gene25689:intergenic | 50.0% | |
| CAGCACTACCTTCTCCTGAA+TGG | + | 51719:6088-6107 | MS.gene25689:CDS | 50.0% | |
| CAGTGCAGACATTCCAATGC+TGG | + | 51719:5393-5412 | MS.gene25689:CDS | 50.0% | |
| CAGTTGCAGACCCATTTGTC+AGG | - | 51719:2898-2917 | MS.gene25689:intergenic | 50.0% | |
| CATGCATTCTGCTTGCTCTC+AGG | + | 51719:4107-4126 | MS.gene25689:intron | 50.0% | |
| CGACTGTTATGTTGAGACGG+AGG | + | 51719:1515-1534 | MS.gene25689:intron | 50.0% | |
| CTGATACCTGTTGACGCGAT+GGG | + | 51719:3130-3149 | MS.gene25689:CDS | 50.0% | |
| CTGCTAAATCAGGGTGGGAT+GGG | - | 51719:5578-5597 | MS.gene25689:intergenic | 50.0% | |
| GACGGGCGTATAACATCATC+AGG | + | 51719:3166-3185 | MS.gene25689:CDS | 50.0% | |
| GCAGTGCCTAGGTTGTCTTA+AGG | + | 51719:2670-2689 | MS.gene25689:CDS | 50.0% | |
| GCTCCTGAACTGGACAAACA+TGG | + | 51719:4159-4178 | MS.gene25689:CDS | 50.0% | |
| GGTCAACTGCTAAATCAGGG+TGG | - | 51719:5584-5603 | MS.gene25689:intergenic | 50.0% | |
| GTGAGCTCACAGCCTACAAT+GGG | - | 51719:710-729 | MS.gene25689:intergenic | 50.0% | |
| GTTAGCACTAGAAGCAGACG+AGG | - | 51719:2876-2895 | MS.gene25689:intergenic | 50.0% | |
| TACAGTGGGAGACCTGGAAA+AGG | - | 51719:5701-5720 | MS.gene25689:intergenic | 50.0% | |
| TCAACAGGTATCAGTTGGCG+AGG | - | 51719:3124-3143 | MS.gene25689:intergenic | 50.0% | |
| TCCGAATCCGCTCCATTAGA+TGG | + | 51719:782-801 | MS.gene25689:CDS | 50.0% | |
| TCGCACATTGTTCCCCTTGA+AGG | - | 51719:4788-4807 | MS.gene25689:intergenic | 50.0% | |
| TCGCGTCAACAGGTATCAGT+TGG | - | 51719:3129-3148 | MS.gene25689:intergenic | 50.0% | |
| TCTGAGGACCATTCAGGAGA+AGG | - | 51719:6099-6118 | MS.gene25689:intergenic | 50.0% | |
| TGAGCAGCATAAGCGGAGAA+TGG | + | 51719:5841-5860 | MS.gene25689:CDS | 50.0% | |
| TGCACTTCTTGCAATGGGCA+AGG | + | 51719:5548-5567 | MS.gene25689:CDS | 50.0% | |
| TGGGTAGTTTGGATGTGGAC+GGG | + | 51719:3149-3168 | MS.gene25689:CDS | 50.0% | |
| TGTTGACGCGATGGGTAGTT+TGG | + | 51719:3138-3157 | MS.gene25689:CDS | 50.0% | |
| ! | ACAACCTAGGCACTGCAATG+TGG | - | 51719:2666-2685 | MS.gene25689:intergenic | 50.0% |
| ! | CACAGAAGTTGCCTTTTCCC+TGG | - | 51719:4704-4723 | MS.gene25689:intergenic | 50.0% |
| ! | CCCATTGCAAGAAGTGCATG+AGG | - | 51719:5546-5565 | MS.gene25689:intergenic | 50.0% |
| ! | GGAGACATCGTCGGTTGTAA+CGG | - | 51719:765-784 | MS.gene25689:intergenic | 50.0% |
| ! | GGTGGTTTCAGCGGATTCAT+TGG | + | 51719:6014-6033 | MS.gene25689:intron | 50.0% |
| ! | TCGGTTGTAACGGTCTTGTC+AGG | - | 51719:755-774 | MS.gene25689:intergenic | 50.0% |
| ! | TCTTTTGGGCCGTGGTATTG+TGG | + | 51719:3956-3975 | MS.gene25689:intron | 50.0% |
| ! | TGCCTTGAATCGGCTGGTTA+AGG | + | 51719:4528-4547 | MS.gene25689:CDS | 50.0% |
| ! | TTGTAACGGTCTTGTCAGGC+CGG | - | 51719:751-770 | MS.gene25689:intergenic | 50.0% |
| AGTTGGCGAGGGATAGGTGA+GGG | - | 51719:3112-3131 | MS.gene25689:intergenic | 55.0% | |
| CACGGTCATGTAAGACTCGG+TGG | - | 51719:2760-2779 | MS.gene25689:intergenic | 55.0% | |
| CGCCTTATGTGCTCTTACGC+CGG | + | 51719:729-748 | MS.gene25689:CDS | 55.0% | |
| CGCGATGGGTAGTTTGGATG+TGG | + | 51719:3144-3163 | MS.gene25689:CDS | 55.0% | |
| CGTGAGCTCACAGCCTACAA+TGG | - | 51719:711-730 | MS.gene25689:intergenic | 55.0% | |
| GGTATCAGTTGGCGAGGGAT+AGG | - | 51719:3118-3137 | MS.gene25689:intergenic | 55.0% | |
| TAGTGTGCATCCATCCGAGC+AGG | + | 51719:2640-2659 | MS.gene25689:CDS | 55.0% | |
| TTGGGCCGTGGTATTGTGGT+GGG | + | 51719:3960-3979 | MS.gene25689:intron | 55.0% | |
| TTTGGGCCGTGGTATTGTGG+TGG | + | 51719:3959-3978 | MS.gene25689:intron | 55.0% | |
| ! | AGCGGATTCGGAGACATCGT+CGG | - | 51719:774-793 | MS.gene25689:intergenic | 55.0% |
| ! | GTTTTGTCTGCGATACGGCC+AGG | - | 51719:3278-3297 | MS.gene25689:intergenic | 55.0% |
| !! | AGGTGGATTCTTTTGGGCCG+TGG | + | 51719:3948-3967 | MS.gene25689:intron | 55.0% |
| CAGGCCACATTGCAGTGCCT+AGG | + | 51719:2659-2678 | MS.gene25689:CDS | 60.0% | |
| CAGTTGGCGAGGGATAGGTG+AGG | - | 51719:3113-3132 | MS.gene25689:intergenic | 60.0% | |
| GCACTGCAATGTGGCCTGCT+CGG | - | 51719:2657-2676 | MS.gene25689:intergenic | 60.0% | |
| GCCAGGATAGAGCCCATGAC+GGG | - | 51719:3261-3280 | MS.gene25689:intergenic | 60.0% | |
| GGCCAGGATAGAGCCCATGA+CGG | - | 51719:3262-3281 | MS.gene25689:intergenic | 60.0% | |
| GTGAGGGAGCTGGAATGACC+CGG | - | 51719:3096-3115 | MS.gene25689:intergenic | 60.0% | |
| TGAGGGAGCTGGAATGACCC+GGG | - | 51719:3095-3114 | MS.gene25689:intergenic | 60.0% | |
| TGCAATGTGGCCTGCTCGGA+TGG | - | 51719:2653-2672 | MS.gene25689:intergenic | 60.0% | |
| TGGGCCGTGGTATTGTGGTG+GGG | + | 51719:3961-3980 | MS.gene25689:intron | 60.0% | |
| ! | GGCCGGCGTAAGAGCACATA+AGG | - | 51719:734-753 | MS.gene25689:intergenic | 60.0% |
| CGAGGGATAGGTGAGGGAGC+TGG | - | 51719:3106-3125 | MS.gene25689:intergenic | 65.0% | |
| GCCCGTCATGGGCTCTATCC+TGG | + | 51719:3257-3276 | MS.gene25689:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51719 | gene | 668 | 6173 | 668 | ID=MS.gene25689 |
| 51719 | mRNA | 668 | 6173 | 668 | ID=MS.gene25689.t1;Parent=MS.gene25689 |
| 51719 | exon | 668 | 825 | 668 | ID=MS.gene25689.t1.exon1;Parent=MS.gene25689.t1 |
| 51719 | CDS | 668 | 825 | 668 | ID=cds.MS.gene25689.t1;Parent=MS.gene25689.t1 |
| 51719 | exon | 2604 | 3348 | 2604 | ID=MS.gene25689.t1.exon2;Parent=MS.gene25689.t1 |
| 51719 | CDS | 2604 | 3348 | 2604 | ID=cds.MS.gene25689.t1;Parent=MS.gene25689.t1 |
| 51719 | exon | 4129 | 4215 | 4129 | ID=MS.gene25689.t1.exon3;Parent=MS.gene25689.t1 |
| 51719 | CDS | 4129 | 4215 | 4129 | ID=cds.MS.gene25689.t1;Parent=MS.gene25689.t1 |
| 51719 | exon | 4303 | 4386 | 4303 | ID=MS.gene25689.t1.exon4;Parent=MS.gene25689.t1 |
| 51719 | CDS | 4303 | 4386 | 4303 | ID=cds.MS.gene25689.t1;Parent=MS.gene25689.t1 |
| 51719 | exon | 4463 | 4549 | 4463 | ID=MS.gene25689.t1.exon5;Parent=MS.gene25689.t1 |
| 51719 | CDS | 4463 | 4549 | 4463 | ID=cds.MS.gene25689.t1;Parent=MS.gene25689.t1 |
| 51719 | exon | 4641 | 4727 | 4641 | ID=MS.gene25689.t1.exon6;Parent=MS.gene25689.t1 |
| 51719 | CDS | 4641 | 4727 | 4641 | ID=cds.MS.gene25689.t1;Parent=MS.gene25689.t1 |
| 51719 | exon | 5219 | 5272 | 5219 | ID=MS.gene25689.t1.exon7;Parent=MS.gene25689.t1 |
| 51719 | CDS | 5219 | 5272 | 5219 | ID=cds.MS.gene25689.t1;Parent=MS.gene25689.t1 |
| 51719 | exon | 5355 | 5446 | 5355 | ID=MS.gene25689.t1.exon8;Parent=MS.gene25689.t1 |
| 51719 | CDS | 5355 | 5446 | 5355 | ID=cds.MS.gene25689.t1;Parent=MS.gene25689.t1 |
| 51719 | exon | 5539 | 5653 | 5539 | ID=MS.gene25689.t1.exon9;Parent=MS.gene25689.t1 |
| 51719 | CDS | 5539 | 5653 | 5539 | ID=cds.MS.gene25689.t1;Parent=MS.gene25689.t1 |
| 51719 | exon | 5797 | 5941 | 5797 | ID=MS.gene25689.t1.exon10;Parent=MS.gene25689.t1 |
| 51719 | CDS | 5797 | 5941 | 5797 | ID=cds.MS.gene25689.t1;Parent=MS.gene25689.t1 |
| 51719 | exon | 6025 | 6173 | 6025 | ID=MS.gene25689.t1.exon11;Parent=MS.gene25689.t1 |
| 51719 | CDS | 6025 | 6173 | 6025 | ID=cds.MS.gene25689.t1;Parent=MS.gene25689.t1 |
| Gene Sequence |
| Protein sequence |
