Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007019.t1 | RHN48864.1 | 99.4 | 544 | 3 | 0 | 4 | 547 | 57 | 600 | 0.00E+00 | 1091.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007019.t1 | Q8W0Z9 | 77.3 | 543 | 110 | 6 | 4 | 540 | 57 | 592 | 4.6e-238 | 825.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007019.t1 | A0A396HAN5 | 99.4 | 544 | 3 | 0 | 4 | 547 | 57 | 600 | 0.0e+00 | 1091.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007019 | MS.gene64648 | PPI |
| MS.gene007019 | MS.gene30926 | PPI |
| MS.gene007019 | MS.gene31185 | PPI |
| MS.gene95244 | MS.gene007019 | PPI |
| MS.gene007019 | MS.gene071562 | PPI |
| MS.gene028621 | MS.gene007019 | PPI |
| MS.gene071561 | MS.gene007019 | PPI |
| MS.gene046235 | MS.gene007019 | PPI |
| MS.gene007019 | MS.gene028620 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007019.t1 | MTR_7g107240 | 93.566 | 544 | 3 | 1 | 4 | 547 | 57 | 568 | 0.0 | 1045 |
| MS.gene007019.t1 | MTR_1g054535 | 81.215 | 543 | 94 | 3 | 4 | 546 | 57 | 591 | 0.0 | 876 |
| MS.gene007019.t1 | MTR_1g054535 | 75.322 | 543 | 89 | 4 | 4 | 546 | 57 | 554 | 0.0 | 785 |
| MS.gene007019.t1 | MTR_1g054605 | 82.851 | 449 | 72 | 3 | 99 | 546 | 57 | 501 | 0.0 | 736 |
| MS.gene007019.t1 | MTR_1g054545 | 77.728 | 449 | 68 | 3 | 99 | 546 | 348 | 765 | 0.0 | 684 |
| MS.gene007019.t1 | MTR_1g054605 | 77.060 | 449 | 69 | 4 | 99 | 546 | 57 | 472 | 0.0 | 669 |
| MS.gene007019.t1 | MTR_5g026280 | 27.751 | 418 | 206 | 11 | 170 | 542 | 4 | 370 | 5.20e-36 | 138 |
| MS.gene007019.t1 | MTR_5g026280 | 27.512 | 418 | 207 | 11 | 170 | 542 | 24 | 390 | 6.76e-36 | 138 |
| MS.gene007019.t1 | MTR_6g084560 | 29.517 | 393 | 191 | 11 | 196 | 542 | 59 | 411 | 1.33e-34 | 135 |
| MS.gene007019.t1 | MTR_8g103870 | 29.243 | 383 | 200 | 13 | 188 | 538 | 47 | 390 | 2.90e-31 | 125 |
| MS.gene007019.t1 | MTR_5g026280 | 27.513 | 378 | 179 | 10 | 209 | 542 | 12 | 338 | 4.29e-30 | 121 |
| MS.gene007019.t1 | MTR_1g011720 | 34.615 | 234 | 116 | 8 | 197 | 424 | 175 | 377 | 2.46e-27 | 117 |
| MS.gene007019.t1 | MTR_1g011720 | 34.615 | 234 | 116 | 8 | 197 | 424 | 175 | 377 | 2.48e-27 | 117 |
| MS.gene007019.t1 | MTR_6g084560 | 29.107 | 347 | 161 | 10 | 196 | 496 | 59 | 366 | 1.33e-26 | 111 |
| MS.gene007019.t1 | MTR_6g084560 | 31.429 | 245 | 127 | 6 | 196 | 429 | 59 | 273 | 1.38e-23 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007019.t1 | AT3G58580 | 75.875 | 543 | 122 | 4 | 4 | 540 | 57 | 596 | 0.0 | 838 |
| MS.gene007019.t1 | AT3G58560 | 76.611 | 543 | 114 | 6 | 4 | 540 | 57 | 592 | 0.0 | 820 |
| MS.gene007019.t1 | AT3G18500 | 30.673 | 401 | 208 | 14 | 169 | 538 | 82 | 443 | 6.43e-39 | 148 |
| MS.gene007019.t1 | AT3G18500 | 30.402 | 398 | 209 | 14 | 169 | 538 | 82 | 439 | 4.03e-38 | 145 |
| MS.gene007019.t1 | AT3G18500 | 30.250 | 400 | 210 | 14 | 169 | 538 | 82 | 442 | 4.41e-38 | 145 |
| MS.gene007019.t1 | AT1G31500 | 28.643 | 398 | 209 | 13 | 167 | 538 | 5 | 353 | 5.06e-33 | 129 |
| MS.gene007019.t1 | AT1G31500 | 28.502 | 414 | 214 | 14 | 158 | 538 | 14 | 378 | 5.83e-33 | 130 |
| MS.gene007019.t1 | AT1G31500 | 28.643 | 398 | 209 | 13 | 167 | 538 | 35 | 383 | 7.82e-33 | 130 |
| MS.gene007019.t1 | AT1G73875 | 29.124 | 388 | 189 | 12 | 197 | 538 | 100 | 447 | 6.46e-32 | 128 |
| MS.gene007019.t1 | AT1G31500 | 28.686 | 373 | 195 | 11 | 191 | 538 | 91 | 417 | 5.54e-31 | 125 |
| MS.gene007019.t1 | AT1G31500 | 28.686 | 373 | 195 | 11 | 191 | 538 | 86 | 412 | 6.25e-31 | 125 |
| MS.gene007019.t1 | AT3G18500 | 27.250 | 400 | 200 | 12 | 169 | 538 | 82 | 420 | 1.30e-28 | 118 |
| MS.gene007019.t1 | AT5G11350 | 32.258 | 248 | 125 | 8 | 191 | 426 | 17 | 233 | 1.68e-27 | 117 |
| MS.gene007019.t1 | AT5G11350 | 32.510 | 243 | 121 | 8 | 194 | 424 | 181 | 392 | 1.11e-26 | 115 |
| MS.gene007019.t1 | AT5G11350 | 32.510 | 243 | 121 | 8 | 194 | 424 | 180 | 391 | 1.12e-26 | 115 |
| MS.gene007019.t1 | AT5G11350 | 32.510 | 243 | 121 | 8 | 194 | 424 | 180 | 391 | 1.14e-26 | 115 |
| MS.gene007019.t1 | AT5G11350 | 32.510 | 243 | 121 | 8 | 194 | 424 | 180 | 391 | 1.18e-26 | 115 |
| MS.gene007019.t1 | AT1G31500 | 29.720 | 286 | 150 | 10 | 158 | 411 | 14 | 280 | 1.56e-25 | 107 |
| MS.gene007019.t1 | AT1G31500 | 30.000 | 270 | 145 | 9 | 167 | 411 | 35 | 285 | 2.61e-25 | 106 |
| MS.gene007019.t1 | AT1G31500 | 30.204 | 245 | 131 | 7 | 191 | 411 | 86 | 314 | 2.41e-23 | 101 |
| MS.gene007019.t1 | AT1G73875 | 30.638 | 235 | 126 | 7 | 197 | 424 | 100 | 304 | 1.69e-21 | 97.4 |
| MS.gene007019.t1 | AT1G73875 | 28.800 | 250 | 124 | 7 | 333 | 538 | 30 | 269 | 1.27e-15 | 77.8 |
Find 0 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTAATTTTTTTA+TGG | + | 51722:50106-50125 | MS.gene007019:intron | 0.0% |
| !! | AAAAACAATATAAAAACTTT+AGG | - | 51722:51249-51268 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAACATAACTTA+AGG | - | 51722:50097-50116 | None:intergenic | 10.0% |
| !!! | AAAGTTTTCTTTATATTTTT+AGG | + | 51722:53715-53734 | MS.gene007019:intron | 10.0% |
| !!! | TTTTAAAAGAAAAAGAAAAT+TGG | - | 51722:53002-53021 | None:intergenic | 10.0% |
| !! | AATACTAACTACAATTAATA+AGG | + | 51722:50506-50525 | MS.gene007019:intron | 15.0% |
| !! | ATACTAACTACAATTAATAA+GGG | + | 51722:50507-50526 | MS.gene007019:intron | 15.0% |
| !! | ATCAAATGATATTGTTAAAT+AGG | - | 51722:51673-51692 | None:intergenic | 15.0% |
| !! | ATTATTCAAAAGAAAATACA+TGG | - | 51722:53977-53996 | None:intergenic | 15.0% |
| !! | CAACCAATAAATATAAAATT+AGG | - | 51722:54846-54865 | None:intergenic | 15.0% |
| !! | TATTTATATCACCAATAAAA+AGG | - | 51722:54259-54278 | None:intergenic | 15.0% |
| !! | TTTAACAATATCATTTGATT+TGG | + | 51722:51674-51693 | MS.gene007019:intron | 15.0% |
| !!! | AATTTTATATTTATTGGTTG+TGG | + | 51722:54846-54865 | MS.gene007019:intron | 15.0% |
| !!! | ATATAAATGTTATTTGTCTT+TGG | + | 51722:52447-52466 | MS.gene007019:intron | 15.0% |
| !!! | ATTTAATTAGTGGATAAATT+TGG | + | 51722:51534-51553 | MS.gene007019:intron | 15.0% |
| !!! | ATTTTATATTTATTGGTTGT+GGG | + | 51722:54847-54866 | MS.gene007019:intron | 15.0% |
| !!! | TTAGATTAAAACCTTTTTAT+TGG | + | 51722:54245-54264 | MS.gene007019:intron | 15.0% |
| !! | AAAAAACATAACTTAAGGTA+AGG | - | 51722:50092-50111 | None:intergenic | 20.0% |
| !! | AAAACAAGATCAATAAAATG+GGG | - | 51722:50763-50782 | None:intergenic | 20.0% |
| !! | ACAAAACAAGATCAATAAAA+TGG | - | 51722:50765-50784 | None:intergenic | 20.0% |
| !! | ATATAAGCTATAAGAAGATA+TGG | + | 51722:50025-50044 | MS.gene007019:intron | 20.0% |
| !! | ATCAACAGGAAAATTATAAA+AGG | - | 51722:51621-51640 | None:intergenic | 20.0% |
| !! | ATCTTATTCAAGATATTTCT+GGG | + | 51722:52518-52537 | MS.gene007019:intron | 20.0% |
| !! | ATTATACTACAAAATCAGTA+TGG | + | 51722:51369-51388 | MS.gene007019:intron | 20.0% |
| !! | CAAAACAAGATCAATAAAAT+GGG | - | 51722:50764-50783 | None:intergenic | 20.0% |
| !! | CATAAAAATTGCTTGAATTA+CGG | + | 51722:49680-49699 | MS.gene007019:intron | 20.0% |
| !! | GTTTATGGCTAAAATTTAAA+AGG | - | 51722:51125-51144 | None:intergenic | 20.0% |
| !! | TAACAAAATATAGATTACAC+AGG | - | 51722:50860-50879 | None:intergenic | 20.0% |
| !! | TATATTAATGTATTTACGGT+GGG | + | 51722:53369-53388 | MS.gene007019:intron | 20.0% |
| !! | TCGATAATTATTGAAGATTA+TGG | + | 51722:51476-51495 | MS.gene007019:intron | 20.0% |
| !! | TTATACTACAAAATCAGTAT+GGG | + | 51722:51370-51389 | MS.gene007019:intron | 20.0% |
| !! | TTATATTAATGTATTTACGG+TGG | + | 51722:53368-53387 | MS.gene007019:intron | 20.0% |
| !! | TTTGTTAGAGAGATAAAATT+GGG | - | 51722:49470-49489 | None:intergenic | 20.0% |
| !!! | ATTAATTTACTACCCTTTTT+AGG | + | 51722:54429-54448 | MS.gene007019:intron | 20.0% |
| !!! | ATTTTGAATTTTGATGACTT+TGG | + | 51722:50158-50177 | MS.gene007019:intron | 20.0% |
| !!! | CTTGATTATATATTTTACAC+AGG | + | 51722:55016-55035 | MS.gene007019:CDS | 20.0% |
| !!! | GGTCCTAATTTTATATTTAT+TGG | + | 51722:54840-54859 | MS.gene007019:intron | 20.0% |
| !!! | TATCAGAAATCTGTTTTTAA+AGG | + | 51722:54590-54609 | MS.gene007019:intron | 20.0% |
| !!! | TTTTGAATTTTGATGACTTT+GGG | + | 51722:50159-50178 | MS.gene007019:intron | 20.0% |
| ! | AAAAACATCTATGTTAAGAC+TGG | - | 51722:52931-52950 | None:intergenic | 25.0% |
| ! | AAAATTAGGACCAAAAATTG+AGG | - | 51722:54832-54851 | None:intergenic | 25.0% |
| ! | AAACAAGATCAATAAAATGG+GGG | - | 51722:50762-50781 | None:intergenic | 25.0% |
| ! | AAAGAAAAAGAAAATTGGAC+AGG | - | 51722:52997-53016 | None:intergenic | 25.0% |
| ! | AAAGAAAACTTTGTAAGTAC+AGG | - | 51722:53707-53726 | None:intergenic | 25.0% |
| ! | AAATACAACATCTTCAAATG+AGG | - | 51722:54193-54212 | None:intergenic | 25.0% |
| ! | AATAACATTTATATACCTCC+TGG | - | 51722:52441-52460 | None:intergenic | 25.0% |
| ! | ACCAAAAAAAGAAAAAAGCA+TGG | - | 51722:54225-54244 | None:intergenic | 25.0% |
| ! | AGTGTATGTTAGACAAAATA+AGG | + | 51722:52613-52632 | MS.gene007019:intron | 25.0% |
| ! | AGTTAATGAAAATGGAAATG+AGG | + | 51722:51886-51905 | MS.gene007019:CDS | 25.0% |
| ! | AGTTTGATTATTTACCTCAT+CGG | - | 51722:49278-49297 | None:intergenic | 25.0% |
| ! | ATCTCTCTAACAAACAAATT+TGG | + | 51722:49476-49495 | MS.gene007019:intron | 25.0% |
| ! | ATGAAGTTATTTATCCAAAC+AGG | - | 51722:49960-49979 | None:intergenic | 25.0% |
| ! | ATTATTAGAGTTATTGGATG+AGG | + | 51722:55143-55162 | MS.gene007019:CDS | 25.0% |
| ! | ATTCTATCACAAAATGACTA+AGG | - | 51722:53095-53114 | None:intergenic | 25.0% |
| ! | ATTGAAGATTATGGCATTAT+GGG | + | 51722:51485-51504 | MS.gene007019:intron | 25.0% |
| ! | CATCTTATTCAAGATATTTC+TGG | + | 51722:52517-52536 | MS.gene007019:intron | 25.0% |
| ! | CCAAACATTCACTAAATAAA+AGG | - | 51722:55092-55111 | None:intergenic | 25.0% |
| ! | CTAGTGACATTTGTAAATAA+AGG | - | 51722:54980-54999 | None:intergenic | 25.0% |
| ! | GTAATTGTATAGATCATTTG+AGG | - | 51722:52332-52351 | None:intergenic | 25.0% |
| ! | GTGTATGTTAGACAAAATAA+GGG | + | 51722:52614-52633 | MS.gene007019:intron | 25.0% |
| ! | GTTACTTGAAAAGGATAAAT+AGG | + | 51722:52712-52731 | MS.gene007019:intron | 25.0% |
| ! | GTTGCATCTTATATTCTAAT+AGG | + | 51722:53165-53184 | MS.gene007019:intron | 25.0% |
| ! | TAAGAGTAACAAATAAAAGC+AGG | - | 51722:53841-53860 | None:intergenic | 25.0% |
| ! | TACAACTAAAAACAGGAAAA+TGG | - | 51722:53954-53973 | None:intergenic | 25.0% |
| ! | TATACTACAAAATCAGTATG+GGG | + | 51722:51371-51390 | MS.gene007019:intron | 25.0% |
| ! | TATTGAAGATTATGGCATTA+TGG | + | 51722:51484-51503 | MS.gene007019:intron | 25.0% |
| ! | TCACTAAATAAAAGGCAAAT+AGG | - | 51722:55084-55103 | None:intergenic | 25.0% |
| ! | TGAAGTTATTTATCCAAACA+GGG | - | 51722:49959-49978 | None:intergenic | 25.0% |
| ! | TGCATTCAAAATAAACACAT+CGG | - | 51722:54403-54422 | None:intergenic | 25.0% |
| ! | TGTTGCAGAAATTTAATTAG+TGG | + | 51722:51524-51543 | MS.gene007019:intron | 25.0% |
| ! | TGTTTCAACAAACATATTGA+CGG | - | 51722:50712-50731 | None:intergenic | 25.0% |
| ! | TTGGGAGATTTAATAATTCT+GGG | + | 51722:51921-51940 | MS.gene007019:CDS | 25.0% |
| ! | TTTATTTAGTGAATGTTTGG+TGG | + | 51722:55092-55111 | MS.gene007019:intron | 25.0% |
| ! | TTTGGGAGATTTAATAATTC+TGG | + | 51722:51920-51939 | MS.gene007019:CDS | 25.0% |
| !! | AACTTTTATATCAGATCAAC+AGG | - | 51722:51635-51654 | None:intergenic | 25.0% |
| !! | AATGTCACTAGAGATTTTAT+TGG | + | 51722:54989-55008 | MS.gene007019:CDS | 25.0% |
| !! | AATTCAAGCAATTTTTATGG+TGG | - | 51722:49679-49698 | None:intergenic | 25.0% |
| !! | AGTCTTAACATAGATGTTTT+TGG | + | 51722:52930-52949 | MS.gene007019:intron | 25.0% |
| !! | CGTAATTCAAGCAATTTTTA+TGG | - | 51722:49682-49701 | None:intergenic | 25.0% |
| !! | GTTTGTTAGAGAGATAAAAT+TGG | - | 51722:49471-49490 | None:intergenic | 25.0% |
| !! | TAATATTATGTACCTTTTCC+AGG | + | 51722:54782-54801 | MS.gene007019:intron | 25.0% |
| !! | TTTGTTCTCATTTTGTAATC+TGG | + | 51722:52832-52851 | MS.gene007019:intron | 25.0% |
| !!! | AAACAATTATTTTGAGACAG+AGG | - | 51722:50375-50394 | None:intergenic | 25.0% |
| !!! | AAAGGTATTCTAGATCAAAT+TGG | - | 51722:51603-51622 | None:intergenic | 25.0% |
| !!! | AACAATTATTTTGAGACAGA+GGG | - | 51722:50374-50393 | None:intergenic | 25.0% |
| !!! | ATTGAGTTGAGTTAGATTAA+CGG | - | 51722:53130-53149 | None:intergenic | 25.0% |
| !!! | CCTTTTATTTAGTGAATGTT+TGG | + | 51722:55089-55108 | MS.gene007019:intron | 25.0% |
| !!! | TCCATGCTTTTTTCTTTTTT+TGG | + | 51722:54221-54240 | MS.gene007019:intron | 25.0% |
| !!! | TGCTTTTATTTGTTACTCTT+AGG | + | 51722:53840-53859 | MS.gene007019:intron | 25.0% |
| !!! | TGTTGGTTAATTACATTTTC+AGG | + | 51722:54871-54890 | MS.gene007019:intron | 25.0% |
| !!! | TTATAACTGTCGTTTTTTGA+TGG | + | 51722:51315-51334 | MS.gene007019:intron | 25.0% |
| !!! | TTTTATTTGTTACTCTTAGG+TGG | + | 51722:53843-53862 | MS.gene007019:intron | 25.0% |
| AAATGTCCACCAAGATTTAA+AGG | + | 51722:54329-54348 | MS.gene007019:CDS | 30.0% | |
| AATAGAAACGAAGACTATTC+TGG | + | 51722:54068-54087 | MS.gene007019:intron | 30.0% | |
| ACAAAATGACTAAGGTTAAC+TGG | - | 51722:53087-53106 | None:intergenic | 30.0% | |
| ACATACACTCTTCTAACTAA+TGG | - | 51722:52602-52621 | None:intergenic | 30.0% | |
| AGAAATATGAGGTTGGAATT+TGG | + | 51722:53472-53491 | MS.gene007019:intron | 30.0% | |
| AGAAGAAAATTGCCTTGAAT+CGG | + | 51722:53614-53633 | MS.gene007019:CDS | 30.0% | |
| AGACAAAATAAGGGACTTAA+AGG | + | 51722:52623-52642 | MS.gene007019:intron | 30.0% | |
| AGAGAAATTCTATATCCTGT+TGG | - | 51722:51149-51168 | None:intergenic | 30.0% | |
| AGATTTAATAATTCTGGGTC+TGG | + | 51722:51926-51945 | MS.gene007019:CDS | 30.0% | |
| ATTTGTGAATGAACTCAAGT+AGG | + | 51722:53024-53043 | MS.gene007019:intron | 30.0% | |
| CATACACTCTTCTAACTAAT+GGG | - | 51722:52601-52620 | None:intergenic | 30.0% | |
| CTAAAAACAGGAAAATGGAA+AGG | - | 51722:53949-53968 | None:intergenic | 30.0% | |
| CTACAACACACTCAAATTTA+AGG | - | 51722:52117-52136 | None:intergenic | 30.0% | |
| GAAAACATAGCTGCAATATT+TGG | - | 51722:53662-53681 | None:intergenic | 30.0% | |
| GAAATCTCAATTCATACTGA+TGG | - | 51722:50338-50357 | None:intergenic | 30.0% | |
| GACAAAATAAGGGACTTAAA+GGG | + | 51722:52624-52643 | MS.gene007019:intron | 30.0% | |
| GATTTAATAATTCTGGGTCT+GGG | + | 51722:51927-51946 | MS.gene007019:CDS | 30.0% | |
| GATTTCAGGGAAATTGAAAT+TGG | - | 51722:49548-49567 | None:intergenic | 30.0% | |
| GCATAGAAAAGTAAAGTAGA+AGG | - | 51722:50883-50902 | None:intergenic | 30.0% | |
| GGAGTCATTATTAGAGTTAT+TGG | + | 51722:55137-55156 | MS.gene007019:CDS | 30.0% | |
| GGCAACATAAATACAATTGA+TGG | + | 51722:53408-53427 | MS.gene007019:CDS | 30.0% | |
| TAATGAAAATGGAAATGAGG+AGG | + | 51722:51889-51908 | MS.gene007019:CDS | 30.0% | |
| TACATGGTACAACTAAAAAC+AGG | - | 51722:53961-53980 | None:intergenic | 30.0% | |
| TCGTTATCCAAAGAAAATAC+TGG | - | 51722:50802-50821 | None:intergenic | 30.0% | |
| TGCTGTATTTCATATTGTGT+AGG | + | 51722:52761-52780 | MS.gene007019:intron | 30.0% | |
| TGGAAGTTAGTTACTTGAAA+AGG | + | 51722:52703-52722 | MS.gene007019:intron | 30.0% | |
| TTACAAGAGAAAAACAAACG+AGG | + | 51722:53290-53309 | MS.gene007019:CDS | 30.0% | |
| TTATTCTTCGTTTGCAAGAA+CGG | + | 51722:54901-54920 | MS.gene007019:CDS | 30.0% | |
| TTCTTGTGTATTGTCAGTAA+AGG | + | 51722:54034-54053 | MS.gene007019:intron | 30.0% | |
| TTGAATTAGGGTTTGAATTG+AGG | + | 51722:49596-49615 | MS.gene007019:intron | 30.0% | |
| TTTGTACTGTTCACAAGAAA+TGG | - | 51722:52888-52907 | None:intergenic | 30.0% | |
| ! | ATTCAATTTAAAGCCACCTT+TGG | - | 51722:49582-49601 | None:intergenic | 30.0% |
| ! | GTTAATGCCAGTATTTTCTT+TGG | + | 51722:50792-50811 | MS.gene007019:intron | 30.0% |
| ! | TGAATCCTACATTTTCTGTT+AGG | + | 51722:51280-51299 | MS.gene007019:intron | 30.0% |
| ! | TTACCATTGATTGTTGTTGT+GGG | + | 51722:49708-49727 | MS.gene007019:intron | 30.0% |
| !! | AACTTGTTACGAGAAATAGT+TGG | + | 51722:52391-52410 | MS.gene007019:CDS | 30.0% |
| !! | ACAATATCATTTGATTTGGC+AGG | + | 51722:51678-51697 | MS.gene007019:intron | 30.0% |
| !! | AGGGAGTATATGTTTAGTTT+TGG | + | 51722:50631-50650 | MS.gene007019:intron | 30.0% |
| !! | AGGTGGCTTTAAATTGAATT+AGG | + | 51722:49583-49602 | MS.gene007019:intron | 30.0% |
| !! | GGTGGCTTTAAATTGAATTA+GGG | + | 51722:49584-49603 | MS.gene007019:intron | 30.0% |
| !! | TTGAGTTGAGTTAGATTAAC+GGG | - | 51722:53129-53148 | None:intergenic | 30.0% |
| !!! | GGGAGTATATGTTTAGTTTT+GGG | + | 51722:50632-50651 | MS.gene007019:intron | 30.0% |
| !!! | GTATATGTTTAGTTTTGGGT+TGG | + | 51722:50636-50655 | MS.gene007019:intron | 30.0% |
| !!! | TTCTTTAGAGTTTTTGTCGT+TGG | + | 51722:50299-50318 | MS.gene007019:intron | 30.0% |
| AAAATGACCATCTAATGGAG+CGG | - | 51722:49888-49907 | None:intergenic | 35.0% | |
| AAACACTATACTAACTTCCC+GGG | + | 51722:52171-52190 | MS.gene007019:CDS | 35.0% | |
| AAACGACTGTTATGTTGAGA+CGG | + | 51722:50608-50627 | MS.gene007019:intron | 35.0% | |
| AAATCCCCAATTAGATCCAA+AGG | + | 51722:49563-49582 | MS.gene007019:intron | 35.0% | |
| AAGAGATAATGCTATATGCG+TGG | + | 51722:54134-54153 | MS.gene007019:intron | 35.0% | |
| AATGATTCAGCATGCTTGTT+GGG | + | 51722:51417-51436 | MS.gene007019:intron | 35.0% | |
| ACAAACATATTGACGGTGAA+TGG | - | 51722:50705-50724 | None:intergenic | 35.0% | |
| ACAACTGTTTCACAACGAAA+TGG | + | 51722:52022-52041 | MS.gene007019:CDS | 35.0% | |
| ACAGGAGTTATTTAGAAGAG+TGG | + | 51722:52683-52702 | MS.gene007019:intron | 35.0% | |
| ACTGATATCATTGTGGAGAA+TGG | + | 51722:51172-51191 | MS.gene007019:intron | 35.0% | |
| AGATGCAACATACAAATACG+AGG | - | 51722:53154-53173 | None:intergenic | 35.0% | |
| AGGAAAAGGGATCGAAATTA+GGG | - | 51722:49431-49450 | None:intergenic | 35.0% | |
| AGGTTTGTGCACGATATTTA+AGG | - | 51722:50587-50606 | None:intergenic | 35.0% | |
| ATTATTGTTTGCTTGCTTGC+AGG | + | 51722:53537-53556 | MS.gene007019:intron | 35.0% | |
| ATTTAAAGGATGTCAAGCTC+TGG | + | 51722:54343-54362 | MS.gene007019:CDS | 35.0% | |
| CAAACACTATACTAACTTCC+CGG | + | 51722:52170-52189 | MS.gene007019:CDS | 35.0% | |
| CAAACATATTGACGGTGAAT+GGG | - | 51722:50704-50723 | None:intergenic | 35.0% | |
| CATATTGTGTAGGAGAGAAA+AGG | + | 51722:52771-52790 | MS.gene007019:intron | 35.0% | |
| CATGTGAAGAAATATGAGGT+TGG | + | 51722:53465-53484 | MS.gene007019:intron | 35.0% | |
| CCATACCTAACAGAAAATGT+AGG | - | 51722:51288-51307 | None:intergenic | 35.0% | |
| CGCAAAAAATGACCATCTAA+TGG | - | 51722:49893-49912 | None:intergenic | 35.0% | |
| CTCAACATAACAGTCGTTTA+AGG | - | 51722:50607-50626 | None:intergenic | 35.0% | |
| CTCACATGTGAAGAAATATG+AGG | + | 51722:53461-53480 | MS.gene007019:CDS | 35.0% | |
| CTCCTGGAGACAAATAATAT+CGG | - | 51722:52425-52444 | None:intergenic | 35.0% | |
| CTCTTTCACTGATATCATTG+TGG | + | 51722:51165-51184 | MS.gene007019:intron | 35.0% | |
| GAGAAAATCGAGCAACAAAT+CGG | - | 51722:49523-49542 | None:intergenic | 35.0% | |
| GCAAGTGCAGTTAATGAAAA+TGG | + | 51722:51878-51897 | MS.gene007019:CDS | 35.0% | |
| GCTTGACATCCTTTAAATCT+TGG | - | 51722:54341-54360 | None:intergenic | 35.0% | |
| GTTGGAAGTAGGCATAATAT+AGG | + | 51722:50654-50673 | MS.gene007019:intron | 35.0% | |
| GTTTGAATTGAGGTGATTCA+AGG | + | 51722:49606-49625 | MS.gene007019:intron | 35.0% | |
| TAACCCACAACAACAATCAA+TGG | - | 51722:49714-49733 | None:intergenic | 35.0% | |
| TAAGAGAGCTATATGATCTG+AGG | - | 51722:55211-55230 | None:intergenic | 35.0% | |
| TAGAGAGAGAAAGAGGAAAA+GGG | - | 51722:49444-49463 | None:intergenic | 35.0% | |
| TATTGAGGTGAAGTAAATGG+CGG | + | 51722:49637-49656 | MS.gene007019:intron | 35.0% | |
| TCGTGTACAGAGTGATAAAA+AGG | + | 51722:51703-51722 | MS.gene007019:intron | 35.0% | |
| TGACATCCTTTAAATCTTGG+TGG | - | 51722:54338-54357 | None:intergenic | 35.0% | |
| TGGAGATTTCAATTCAGTTC+CGG | + | 51722:54516-54535 | MS.gene007019:CDS | 35.0% | |
| TTAGAGAGAGAAAGAGGAAA+AGG | - | 51722:49445-49464 | None:intergenic | 35.0% | |
| TTTCGTTGTGAAACAGTTGT+AGG | - | 51722:52022-52041 | None:intergenic | 35.0% | |
| ! | ATGTTGCCTTTGGTATTTTG+TGG | + | 51722:52971-52990 | MS.gene007019:intron | 35.0% |
| ! | CAGCTTATCAGGTTTTTCTT+CGG | + | 51722:50235-50254 | MS.gene007019:intron | 35.0% |
| ! | CCTACATTTTCTGTTAGGTA+TGG | + | 51722:51285-51304 | MS.gene007019:intron | 35.0% |
| ! | CTATATCCTGTTGGTGTTTA+TGG | - | 51722:51140-51159 | None:intergenic | 35.0% |
| ! | GTTACCATTGATTGTTGTTG+TGG | + | 51722:49707-49726 | MS.gene007019:intron | 35.0% |
| ! | TCAAGCAATTTTTATGGTGG+CGG | - | 51722:49676-49695 | None:intergenic | 35.0% |
| ! | TGAGTTGAGTTAGATTAACG+GGG | - | 51722:53128-53147 | None:intergenic | 35.0% |
| ! | TGGTAATGTATAGCAACACT+TGG | + | 51722:54748-54767 | MS.gene007019:intron | 35.0% |
| ! | TGTGCTCTTTCCTCAATTTT+TGG | + | 51722:54819-54838 | MS.gene007019:intron | 35.0% |
| ! | TTATCAGGTTTTTCTTCGGT+TGG | + | 51722:50239-50258 | MS.gene007019:intron | 35.0% |
| ! | TTCTGAAAGTCATTGCTTCT+TGG | + | 51722:53679-53698 | MS.gene007019:intron | 35.0% |
| ! | TTTTAGCCATAAACACCAAC+AGG | + | 51722:51131-51150 | MS.gene007019:intron | 35.0% |
| !! | AACAAGTTTTGTCTGCGATA+CGG | - | 51722:52379-52398 | None:intergenic | 35.0% |
| !! | CAATGGTAACTTTTGGAAAC+AGG | - | 51722:51800-51819 | None:intergenic | 35.0% |
| !! | GGGTTACAGTTTTTGGATTA+CGG | + | 51722:49728-49747 | MS.gene007019:intron | 35.0% |
| !! | TACTCTCTAAAACATTTGCG+AGG | - | 51722:52797-52816 | None:intergenic | 35.0% |
| !! | TCAAGTAGGTGGATTCTTTT+GGG | + | 51722:53038-53057 | MS.gene007019:intron | 35.0% |
| !! | TCGTGTTGGTTTGTACAAAT+GGG | + | 51722:51207-51226 | MS.gene007019:intron | 35.0% |
| !! | TTCGTGTTGGTTTGTACAAA+TGG | + | 51722:51206-51225 | MS.gene007019:intron | 35.0% |
| !! | TTGGTTTGTACAAATGGGAT+TGG | + | 51722:51212-51231 | MS.gene007019:intron | 35.0% |
| !! | TTGTTGTGGGTTACAGTTTT+TGG | + | 51722:49721-49740 | MS.gene007019:intron | 35.0% |
| !!! | GTCATTTTTTGCGCTATAAG+TGG | + | 51722:49900-49919 | MS.gene007019:intron | 35.0% |
| !!! | TTTAGTTTTGGGTTGGAAGT+AGG | + | 51722:50643-50662 | MS.gene007019:intron | 35.0% |
| !!! | TTTTAGCCTTAAGACAACCT+AGG | - | 51722:51775-51794 | None:intergenic | 35.0% |
| AAATCTCCACAAACCAGCAT+TGG | - | 51722:54505-54524 | None:intergenic | 40.0% | |
| AAGCCACCTTTGGATCTAAT+TGG | - | 51722:49572-49591 | None:intergenic | 40.0% | |
| ACGAAGCATGACAGTAGAAA+AGG | - | 51722:54004-54023 | None:intergenic | 40.0% | |
| ACTGTTTCACAACGAAATGG+CGG | + | 51722:52025-52044 | MS.gene007019:CDS | 40.0% | |
| AGAAACACTTTGGACTGCAA+TGG | - | 51722:51817-51836 | None:intergenic | 40.0% | |
| AGCCACCTTTGGATCTAATT+GGG | - | 51722:49571-49590 | None:intergenic | 40.0% | |
| ATACAATTACTGCCCGTCAT+GGG | + | 51722:52342-52361 | MS.gene007019:CDS | 40.0% | |
| ATACTGCAAAGGATAAGACC+TGG | - | 51722:51018-51037 | None:intergenic | 40.0% | |
| ATATGATCTGAGGACCATTC+AGG | - | 51722:55201-55220 | None:intergenic | 40.0% | |
| ATCATTGTGGAGAATGGAGA+TGG | + | 51722:51178-51197 | MS.gene007019:intron | 40.0% | |
| ATCCAAACAGGGCTTAAAAG+AGG | - | 51722:49948-49967 | None:intergenic | 40.0% | |
| ATTTCAATTCAGTTCCGGGA+AGG | + | 51722:54521-54540 | MS.gene007019:CDS | 40.0% | |
| CAATGATTCAGCATGCTTGT+TGG | + | 51722:51416-51435 | MS.gene007019:intron | 40.0% | |
| CAGAGACAAAACTTACTGTG+GGG | + | 51722:52143-52162 | MS.gene007019:CDS | 40.0% | |
| CATGCATCTGAGAAACACTT+TGG | - | 51722:51827-51846 | None:intergenic | 40.0% | |
| CATGTGAGAATCTGTCTCTA+CGG | - | 51722:53449-53468 | None:intergenic | 40.0% | |
| CCAGTATCTATCAGCTTATC+AGG | + | 51722:50224-50243 | MS.gene007019:intron | 40.0% | |
| CCTACAATGGGAATATCAGA+AGG | - | 51722:49794-49813 | None:intergenic | 40.0% | |
| CCTGATAAGCTGATAGATAC+TGG | - | 51722:50227-50246 | None:intergenic | 40.0% | |
| CCTTCTGATATTCCCATTGT+AGG | + | 51722:49791-49810 | MS.gene007019:intron | 40.0% | |
| CGAAGCATGACAGTAGAAAA+GGG | - | 51722:54003-54022 | None:intergenic | 40.0% | |
| CGATATTATTTGTCTCCAGG+AGG | + | 51722:52423-52442 | MS.gene007019:CDS | 40.0% | |
| CGTGCTAAGATTGTAGTTTC+TGG | + | 51722:50827-50846 | MS.gene007019:intron | 40.0% | |
| CTAGTGCTAACCTGACAAAT+GGG | + | 51722:51981-52000 | MS.gene007019:CDS | 40.0% | |
| CTGGACAAACATGGCTATTA+CGG | + | 51722:53264-53283 | MS.gene007019:CDS | 40.0% | |
| GAGAAAAACAAACGAGGTTG+TGG | + | 51722:53296-53315 | MS.gene007019:intron | 40.0% | |
| GAGGAAAAGGGATCGAAATT+AGG | - | 51722:49432-49451 | None:intergenic | 40.0% | |
| GCAAAGAAGAGAGATAGATG+AGG | - | 51722:49358-49377 | None:intergenic | 40.0% | |
| GCACACTCTCTTAAAAGGAT+TGG | + | 51722:54453-54472 | MS.gene007019:CDS | 40.0% | |
| GCAGAGACAAAACTTACTGT+GGG | + | 51722:52142-52161 | MS.gene007019:CDS | 40.0% | |
| GCATAATATAGGTGTTCAGC+GGG | + | 51722:50665-50684 | MS.gene007019:intron | 40.0% | |
| GGAGACAAATAATATCGGCA+CGG | - | 51722:52420-52439 | None:intergenic | 40.0% | |
| GGAGATTTCAATTCAGTTCC+GGG | + | 51722:54517-54536 | MS.gene007019:CDS | 40.0% | |
| GGATCTAATTGGGGATTTCA+GGG | - | 51722:49561-49580 | None:intergenic | 40.0% | |
| GGCATAATATAGGTGTTCAG+CGG | + | 51722:50664-50683 | MS.gene007019:intron | 40.0% | |
| GGCATTATGGGCCAAAATTT+GGG | + | 51722:51497-51516 | MS.gene007019:intron | 40.0% | |
| GGGAGACTATCAATCTCATA+TGG | - | 51722:52581-52600 | None:intergenic | 40.0% | |
| GTGGGTTCACAGGTATATAA+TGG | + | 51722:53387-53406 | MS.gene007019:intron | 40.0% | |
| TACTGCAAAGGATAAGACCT+GGG | - | 51722:51017-51036 | None:intergenic | 40.0% | |
| TAGGTGCACACTCTCTTAAA+AGG | + | 51722:54448-54467 | MS.gene007019:intron | 40.0% | |
| TATACAATTACTGCCCGTCA+TGG | + | 51722:52341-52360 | MS.gene007019:CDS | 40.0% | |
| TATACATTACCAGTGGCAAC+TGG | - | 51722:54740-54759 | None:intergenic | 40.0% | |
| TATCTTCACATTCATGTCCC+AGG | + | 51722:50997-51016 | MS.gene007019:intron | 40.0% | |
| TATTGGATGAGGAGAGTTTG+AGG | + | 51722:55154-55173 | MS.gene007019:CDS | 40.0% | |
| TCCAAACAGGGCTTAAAAGA+GGG | - | 51722:49947-49966 | None:intergenic | 40.0% | |
| TCGGATTGAGACTGTGAAAA+AGG | - | 51722:49504-49523 | None:intergenic | 40.0% | |
| TCTAGTGCTAACCTGACAAA+TGG | + | 51722:51980-51999 | MS.gene007019:CDS | 40.0% | |
| TGAAAATGGAAATGAGGAGG+AGG | + | 51722:51892-51911 | MS.gene007019:CDS | 40.0% | |
| TGCAGAGACAAAACTTACTG+TGG | + | 51722:52141-52160 | MS.gene007019:CDS | 40.0% | |
| TGCCGATATTATTTGTCTCC+AGG | + | 51722:52420-52439 | MS.gene007019:CDS | 40.0% | |
| TGGATCTAATTGGGGATTTC+AGG | - | 51722:49562-49581 | None:intergenic | 40.0% | |
| TGGCATTATGGGCCAAAATT+TGG | + | 51722:51496-51515 | MS.gene007019:intron | 40.0% | |
| TGTGAATGAACTCAAGTAGG+TGG | + | 51722:53027-53046 | MS.gene007019:intron | 40.0% | |
| TTGGATATGAGCAGCATAAG+CGG | + | 51722:54930-54949 | MS.gene007019:CDS | 40.0% | |
| TTGTCTACTCATGCCTTCAA+GGG | + | 51722:53868-53887 | MS.gene007019:intron | 40.0% | |
| ! | AAGAGAGTGTGCACCTAAAA+AGG | - | 51722:54445-54464 | None:intergenic | 40.0% |
| ! | ACTAACTCTCATGTTGCTTG+TGG | + | 51722:54285-54304 | MS.gene007019:intron | 40.0% |
| ! | AGAGAGTGTGCACCTAAAAA+GGG | - | 51722:54444-54463 | None:intergenic | 40.0% |
| ! | AGGAAAGAGCACAATTACAG+TGG | - | 51722:54812-54831 | None:intergenic | 40.0% |
| ! | ATTTATTGGTTGTGGGCTGT+TGG | + | 51722:54854-54873 | MS.gene007019:intron | 40.0% |
| ! | CAAAGTGTTTCTCAGATGCA+TGG | + | 51722:51825-51844 | MS.gene007019:CDS | 40.0% |
| ! | CAAGGCAATTTTCTTCTGAG+TGG | - | 51722:53611-53630 | None:intergenic | 40.0% |
| ! | CTAACTCTCATGTTGCTTGT+GGG | + | 51722:54286-54305 | MS.gene007019:intron | 40.0% |
| ! | CTTTTCCCTGGATTATCAAC+AGG | - | 51722:53788-53807 | None:intergenic | 40.0% |
| ! | GCAATTTTCTTCTGAGTGGT+TGG | - | 51722:53607-53626 | None:intergenic | 40.0% |
| ! | GGAAAGAGCACAATTACAGT+GGG | - | 51722:54811-54830 | None:intergenic | 40.0% |
| ! | GGAGATGGATATTTTCGTGT+TGG | + | 51722:51193-51212 | MS.gene007019:intron | 40.0% |
| ! | GGTGAAACTTGGTTTGAAGT+TGG | + | 51722:52046-52065 | MS.gene007019:CDS | 40.0% |
| ! | GTGTTGCTATACATTACCAG+TGG | - | 51722:54747-54766 | None:intergenic | 40.0% |
| ! | TGAATGTTTGGTGGTTTCAG+CGG | + | 51722:55101-55120 | MS.gene007019:intron | 40.0% |
| ! | TGAATTTTTCGCTCCTGAAC+TGG | + | 51722:53245-53264 | MS.gene007019:CDS | 40.0% |
| ! | TGGACTGCAATGGTAACTTT+TGG | - | 51722:51807-51826 | None:intergenic | 40.0% |
| ! | TGTTGGGTGACATCTTTTTC+TGG | + | 51722:51433-51452 | MS.gene007019:intron | 40.0% |
| !! | AATCAGCCTGTTGATAATCC+AGG | + | 51722:53779-53798 | MS.gene007019:CDS | 40.0% |
| !! | ATCAGCCTGTTGATAATCCA+GGG | + | 51722:53780-53799 | MS.gene007019:CDS | 40.0% |
| !! | CTCAAGTAGGTGGATTCTTT+TGG | + | 51722:53037-53056 | MS.gene007019:intron | 40.0% |
| !! | CTGTTGATAATCCAGGGAAA+AGG | + | 51722:53786-53805 | MS.gene007019:CDS | 40.0% |
| !! | GGGTATTGAGGTGAAGTAAA+TGG | + | 51722:49634-49653 | MS.gene007019:intron | 40.0% |
| !! | TGGTGAATCAATTTGCTGTG+AGG | - | 51722:54720-54739 | None:intergenic | 40.0% |
| !! | TGGTTTAGTTCTTTCCCCAT+TGG | + | 51722:52852-52871 | MS.gene007019:intron | 40.0% |
| !!! | TGGGTTTTAGAGAGAGAAAG+AGG | - | 51722:49451-49470 | None:intergenic | 40.0% |
| AAATGGAAATGAGGAGGAGG+AGG | + | 51722:51895-51914 | MS.gene007019:CDS | 45.0% | |
| AAATGGTTGAGCTCTGCCAA+TGG | - | 51722:52871-52890 | None:intergenic | 45.0% | |
| AACGAAATGGCGGTGAAACT+TGG | + | 51722:52035-52054 | MS.gene007019:CDS | 45.0% | |
| AATGGTTGAGCTCTGCCAAT+GGG | - | 51722:52870-52889 | None:intergenic | 45.0% | |
| ACCAAAGGCAACATCAGTCA+AGG | - | 51722:52965-52984 | None:intergenic | 45.0% | |
| ACCAATGTCATCAGCTGATG+GGG | - | 51722:52089-52108 | None:intergenic | 45.0% | |
| ACCTTGACTGATGTTGCCTT+TGG | + | 51722:52961-52980 | MS.gene007019:intron | 45.0% | |
| AGTGGGTCAACTGCTAAATC+AGG | - | 51722:54684-54703 | None:intergenic | 45.0% | |
| ATGGGTAGTTTGGATGTGGA+CGG | + | 51722:52244-52263 | MS.gene007019:CDS | 45.0% | |
| CATTAACTGCACTTGCAGCA+CGG | - | 51722:51874-51893 | None:intergenic | 45.0% | |
| CATTGGAATGTCTGCACTGA+CGG | - | 51722:54488-54507 | None:intergenic | 45.0% | |
| CCTCATGCACTTCTTGCAAT+GGG | + | 51722:54639-54658 | MS.gene007019:CDS | 45.0% | |
| CTGGCTAATGCAGTATTGCA+TGG | + | 51722:50968-50987 | MS.gene007019:intron | 45.0% | |
| CTTCTGAGTGGTTGGAATCA+TGG | - | 51722:53599-53618 | None:intergenic | 45.0% | |
| CTTGTCTACTCATGCCTTCA+AGG | + | 51722:53867-53886 | MS.gene007019:intron | 45.0% | |
| GAAAAGGCAACTTCTGTGTG+TGG | + | 51722:53802-53821 | MS.gene007019:CDS | 45.0% | |
| GAAAATTGCCTTGAATCGGC+TGG | + | 51722:53618-53637 | MS.gene007019:CDS | 45.0% | |
| GAATTGAGGTGATTCAAGGC+TGG | + | 51722:49610-49629 | MS.gene007019:intron | 45.0% | |
| GACAGGCCACAAAATACCAA+AGG | - | 51722:52980-52999 | None:intergenic | 45.0% | |
| GACCAATGTCATCAGCTGAT+GGG | - | 51722:52090-52109 | None:intergenic | 45.0% | |
| GACTATTCTGGCAACTTCTG+AGG | + | 51722:54080-54099 | MS.gene007019:intron | 45.0% | |
| GACTGTTATGTTGAGACGGA+GGG | + | 51722:50612-50631 | MS.gene007019:intron | 45.0% | |
| GAGAAGCAATCAAACCTTCC+CGG | - | 51722:54538-54557 | None:intergenic | 45.0% | |
| GAGGACGCAATATGTTGAGT+GGG | - | 51722:54701-54720 | None:intergenic | 45.0% | |
| GCCACCTTTGGATCTAATTG+GGG | - | 51722:49570-49589 | None:intergenic | 45.0% | |
| GCTATCATTGAAGCAGCAAC+AGG | + | 51722:52665-52684 | MS.gene007019:intron | 45.0% | |
| GCTGCTGCAAAAATAAACCC+AGG | + | 51722:55241-55260 | MS.gene007019:CDS | 45.0% | |
| GTCAACTGCTAAATCAGGGT+GGG | - | 51722:54679-54698 | None:intergenic | 45.0% | |
| GTGGGTCAACTGCTAAATCA+GGG | - | 51722:54683-54702 | None:intergenic | 45.0% | |
| TAGCCATGTTTGTCCAGTTC+AGG | - | 51722:53261-53280 | None:intergenic | 45.0% | |
| TCCCCAATTAGATCCAAAGG+TGG | + | 51722:49566-49585 | MS.gene007019:intron | 45.0% | |
| TCCTCATGCACTTCTTGCAA+TGG | + | 51722:54638-54657 | MS.gene007019:CDS | 45.0% | |
| TCTTCGTTTGCAAGAACGGT+TGG | + | 51722:54905-54924 | MS.gene007019:CDS | 45.0% | |
| TGACCAATGTCATCAGCTGA+TGG | - | 51722:52091-52110 | None:intergenic | 45.0% | |
| TGAGGACGCAATATGTTGAG+TGG | - | 51722:54702-54721 | None:intergenic | 45.0% | |
| TGTCTACTCATGCCTTCAAG+GGG | + | 51722:53869-53888 | MS.gene007019:intron | 45.0% | |
| TGTGCACACTGATACTGCAA+AGG | - | 51722:51029-51048 | None:intergenic | 45.0% | |
| TTAGCCAGTGAAGTACACAC+AGG | - | 51722:50956-50975 | None:intergenic | 45.0% | |
| TTCTCCTGTGTGTACTTCAC+TGG | + | 51722:50949-50968 | MS.gene007019:intron | 45.0% | |
| ! | ACCATCTAATGGAGCGGATT+CGG | - | 51722:49882-49901 | None:intergenic | 45.0% |
| ! | ATTGATTCACCAGTTGCCAC+TGG | + | 51722:54728-54747 | MS.gene007019:CDS | 45.0% |
| ! | TACCTTAACCAGCCGATTCA+AGG | - | 51722:53629-53648 | None:intergenic | 45.0% |
| ! | TCATGTTGCTTGTGGGCTTT+AGG | + | 51722:54293-54312 | MS.gene007019:intron | 45.0% |
| ! | TCCCTCTTTTAAGCCCTGTT+TGG | + | 51722:49943-49962 | MS.gene007019:intron | 45.0% |
| ! | TGCAACACTCGCCCAAATTT+TGG | - | 51722:51511-51530 | None:intergenic | 45.0% |
| ! | TGTATTTACGGTGGGTTCAC+AGG | + | 51722:53377-53396 | MS.gene007019:intron | 45.0% |
| ! | TTCAGCGGATTCATTGGTTG+TGG | + | 51722:55116-55135 | MS.gene007019:intron | 45.0% |
| !! | AATGAGGAGGAGGAGGTATT+TGG | + | 51722:51902-51921 | MS.gene007019:CDS | 45.0% |
| !! | ATGAGGAGGAGGAGGTATTT+GGG | + | 51722:51903-51922 | MS.gene007019:CDS | 45.0% |
| !! | GACATTCCAATGCTGGTTTG+TGG | + | 51722:54496-54515 | MS.gene007019:CDS | 45.0% |
| !! | TTTGCAAGAACGGTTGGTCT+TGG | + | 51722:54911-54930 | MS.gene007019:CDS | 45.0% |
| !!! | TTTTTATGGTGGCGGATACC+AGG | - | 51722:49668-49687 | None:intergenic | 45.0% |
| !!! | TTTTTATATTAATGTATTTA+CGG | + | 51722:53365-53384 | MS.gene007019:intron | 5.0% |
| AAACTACCCATCGCGTCAAC+AGG | - | 51722:52235-52254 | None:intergenic | 50.0% | |
| ACCCCATCAGCTGATGACAT+TGG | + | 51722:52085-52104 | MS.gene007019:CDS | 50.0% | |
| ACTGATACCTGTTGACGCGA+TGG | + | 51722:52225-52244 | MS.gene007019:CDS | 50.0% | |
| ACTGCTAAATCAGGGTGGGA+TGG | - | 51722:54675-54694 | None:intergenic | 50.0% | |
| AGAAGCAGACGAGGATAAGC+TGG | - | 51722:51963-51982 | None:intergenic | 50.0% | |
| ATCACCCCACCACAATACCA+CGG | - | 51722:53064-53083 | None:intergenic | 50.0% | |
| ATGGTTGAGCTCTGCCAATG+GGG | - | 51722:52869-52888 | None:intergenic | 50.0% | |
| CAACAGGTATCAGTTGGCGA+GGG | - | 51722:52219-52238 | None:intergenic | 50.0% | |
| CACAATTACAGTGGGAGACC+TGG | - | 51722:54803-54822 | None:intergenic | 50.0% | |
| CAGCACGGTCATGTAAGACT+CGG | - | 51722:51859-51878 | None:intergenic | 50.0% | |
| CAGCACTACCTTCTCCTGAA+TGG | + | 51722:55184-55203 | MS.gene007019:CDS | 50.0% | |
| CAGTGCAGACATTCCAATGC+TGG | + | 51722:54489-54508 | MS.gene007019:CDS | 50.0% | |
| CAGTTGCAGACCCATTTGTC+AGG | - | 51722:51994-52013 | None:intergenic | 50.0% | |
| CATGCATTCTGCTTGCTCTC+AGG | + | 51722:53203-53222 | MS.gene007019:intron | 50.0% | |
| CGACTGTTATGTTGAGACGG+AGG | + | 51722:50611-50630 | MS.gene007019:intron | 50.0% | |
| CTGATACCTGTTGACGCGAT+GGG | + | 51722:52226-52245 | MS.gene007019:CDS | 50.0% | |
| CTGCTAAATCAGGGTGGGAT+GGG | - | 51722:54674-54693 | None:intergenic | 50.0% | |
| GACGGGCGTATAACATCATC+AGG | + | 51722:52262-52281 | MS.gene007019:CDS | 50.0% | |
| GCAGTGCCTAGGTTGTCTTA+AGG | + | 51722:51766-51785 | MS.gene007019:CDS | 50.0% | |
| GCTCCTGAACTGGACAAACA+TGG | + | 51722:53255-53274 | MS.gene007019:CDS | 50.0% | |
| GGTCAACTGCTAAATCAGGG+TGG | - | 51722:54680-54699 | None:intergenic | 50.0% | |
| GTGAGCTCACAGCCTACAAT+GGG | - | 51722:49806-49825 | None:intergenic | 50.0% | |
| GTTAGCACTAGAAGCAGACG+AGG | - | 51722:51972-51991 | None:intergenic | 50.0% | |
| TACAGTGGGAGACCTGGAAA+AGG | - | 51722:54797-54816 | None:intergenic | 50.0% | |
| TCAACAGGTATCAGTTGGCG+AGG | - | 51722:52220-52239 | None:intergenic | 50.0% | |
| TCCGAATCCGCTCCATTAGA+TGG | + | 51722:49878-49897 | MS.gene007019:intron | 50.0% | |
| TCGCACATTGTTCCCCTTGA+AGG | - | 51722:53884-53903 | None:intergenic | 50.0% | |
| TCGCGTCAACAGGTATCAGT+TGG | - | 51722:52225-52244 | None:intergenic | 50.0% | |
| TCTGAGGACCATTCAGGAGA+AGG | - | 51722:55195-55214 | None:intergenic | 50.0% | |
| TGAGCAGCATAAGCGGAGAA+TGG | + | 51722:54937-54956 | MS.gene007019:CDS | 50.0% | |
| TGCACTTCTTGCAATGGGCA+AGG | + | 51722:54644-54663 | MS.gene007019:CDS | 50.0% | |
| TGGGTAGTTTGGATGTGGAC+GGG | + | 51722:52245-52264 | MS.gene007019:CDS | 50.0% | |
| TGTTGACGCGATGGGTAGTT+TGG | + | 51722:52234-52253 | MS.gene007019:CDS | 50.0% | |
| TTGAGGTGATTCAAGGCTGG+CGG | + | 51722:49613-49632 | MS.gene007019:intron | 50.0% | |
| ! | ACAACCTAGGCACTGCAATG+TGG | - | 51722:51762-51781 | None:intergenic | 50.0% |
| ! | CACAGAAGTTGCCTTTTCCC+TGG | - | 51722:53800-53819 | None:intergenic | 50.0% |
| ! | CCCATTGCAAGAAGTGCATG+AGG | - | 51722:54642-54661 | None:intergenic | 50.0% |
| ! | GGAGACATCGTCGGTTGTAA+CGG | - | 51722:49861-49880 | None:intergenic | 50.0% |
| ! | GGTGGTTTCAGCGGATTCAT+TGG | + | 51722:55110-55129 | MS.gene007019:intron | 50.0% |
| ! | TCGGTTGTAACGGTCTTGTC+AGG | - | 51722:49851-49870 | None:intergenic | 50.0% |
| ! | TCTTTTGGGCCGTGGTATTG+TGG | + | 51722:53052-53071 | MS.gene007019:intron | 50.0% |
| ! | TGCCTTGAATCGGCTGGTTA+AGG | + | 51722:53624-53643 | MS.gene007019:CDS | 50.0% |
| ! | TTGTAACGGTCTTGTCAGGC+CGG | - | 51722:49847-49866 | None:intergenic | 50.0% |
| AGTTGGCGAGGGATAGGTGA+GGG | - | 51722:52208-52227 | None:intergenic | 55.0% | |
| CACGGTCATGTAAGACTCGG+TGG | - | 51722:51856-51875 | None:intergenic | 55.0% | |
| CGCCTTATGTGCTCTTACGC+CGG | + | 51722:49825-49844 | MS.gene007019:intron | 55.0% | |
| CGCGATGGGTAGTTTGGATG+TGG | + | 51722:52240-52259 | MS.gene007019:CDS | 55.0% | |
| CGTGAGCTCACAGCCTACAA+TGG | - | 51722:49807-49826 | None:intergenic | 55.0% | |
| GGTATCAGTTGGCGAGGGAT+AGG | - | 51722:52214-52233 | None:intergenic | 55.0% | |
| TAGTGTGCATCCATCCGAGC+AGG | + | 51722:51736-51755 | MS.gene007019:CDS | 55.0% | |
| TGAGGTGATTCAAGGCTGGC+GGG | + | 51722:49614-49633 | MS.gene007019:intron | 55.0% | |
| TTGGGCCGTGGTATTGTGGT+GGG | + | 51722:53056-53075 | MS.gene007019:intron | 55.0% | |
| TTTGGGCCGTGGTATTGTGG+TGG | + | 51722:53055-53074 | MS.gene007019:intron | 55.0% | |
| ! | AGCGGATTCGGAGACATCGT+CGG | - | 51722:49870-49889 | None:intergenic | 55.0% |
| ! | GTTTTGTCTGCGATACGGCC+AGG | - | 51722:52374-52393 | None:intergenic | 55.0% |
| ! | TTCAAGGCTGGCGGGTATTG+AGG | + | 51722:49622-49641 | MS.gene007019:intron | 55.0% |
| !! | AAGTAAATGGCGGATCCGCC+TGG | + | 51722:49647-49666 | MS.gene007019:intron | 55.0% |
| !! | AGGTGGATTCTTTTGGGCCG+TGG | + | 51722:53044-53063 | MS.gene007019:intron | 55.0% |
| !! | TTATGGTGGCGGATACCAGG+CGG | - | 51722:49665-49684 | None:intergenic | 55.0% |
| CAGGCCACATTGCAGTGCCT+AGG | + | 51722:51755-51774 | MS.gene007019:CDS | 60.0% | |
| CAGTTGGCGAGGGATAGGTG+AGG | - | 51722:52209-52228 | None:intergenic | 60.0% | |
| GCACTGCAATGTGGCCTGCT+CGG | - | 51722:51753-51772 | None:intergenic | 60.0% | |
| GCCAGGATAGAGCCCATGAC+GGG | - | 51722:52357-52376 | None:intergenic | 60.0% | |
| GGCCAGGATAGAGCCCATGA+CGG | - | 51722:52358-52377 | None:intergenic | 60.0% | |
| GTGAGGGAGCTGGAATGACC+CGG | - | 51722:52192-52211 | None:intergenic | 60.0% | |
| TGAGGGAGCTGGAATGACCC+GGG | - | 51722:52191-52210 | None:intergenic | 60.0% | |
| TGCAATGTGGCCTGCTCGGA+TGG | - | 51722:51749-51768 | None:intergenic | 60.0% | |
| TGGGCCGTGGTATTGTGGTG+GGG | + | 51722:53057-53076 | MS.gene007019:intron | 60.0% | |
| ! | GGCCGGCGTAAGAGCACATA+AGG | - | 51722:49830-49849 | None:intergenic | 60.0% |
| CGAGGGATAGGTGAGGGAGC+TGG | - | 51722:52202-52221 | None:intergenic | 65.0% | |
| GCCCGTCATGGGCTCTATCC+TGG | + | 51722:52353-52372 | MS.gene007019:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51722 | gene | 49271 | 55269 | 49271 | ID=MS.gene007019 |
| 51722 | mRNA | 49271 | 55269 | 49271 | ID=MS.gene007019.t1;Parent=MS.gene007019 |
| 51722 | exon | 49271 | 49282 | 49271 | ID=MS.gene007019.t1.exon1;Parent=MS.gene007019.t1 |
| 51722 | CDS | 49271 | 49282 | 49271 | ID=cds.MS.gene007019.t1;Parent=MS.gene007019.t1 |
| 51722 | exon | 51713 | 52444 | 51713 | ID=MS.gene007019.t1.exon2;Parent=MS.gene007019.t1 |
| 51722 | CDS | 51713 | 52444 | 51713 | ID=cds.MS.gene007019.t1;Parent=MS.gene007019.t1 |
| 51722 | exon | 53225 | 53311 | 53225 | ID=MS.gene007019.t1.exon3;Parent=MS.gene007019.t1 |
| 51722 | CDS | 53225 | 53311 | 53225 | ID=cds.MS.gene007019.t1;Parent=MS.gene007019.t1 |
| 51722 | exon | 53399 | 53482 | 53399 | ID=MS.gene007019.t1.exon4;Parent=MS.gene007019.t1 |
| 51722 | CDS | 53399 | 53482 | 53399 | ID=cds.MS.gene007019.t1;Parent=MS.gene007019.t1 |
| 51722 | exon | 53559 | 53645 | 53559 | ID=MS.gene007019.t1.exon5;Parent=MS.gene007019.t1 |
| 51722 | CDS | 53559 | 53645 | 53559 | ID=cds.MS.gene007019.t1;Parent=MS.gene007019.t1 |
| 51722 | exon | 53737 | 53823 | 53737 | ID=MS.gene007019.t1.exon6;Parent=MS.gene007019.t1 |
| 51722 | CDS | 53737 | 53823 | 53737 | ID=cds.MS.gene007019.t1;Parent=MS.gene007019.t1 |
| 51722 | exon | 54315 | 54368 | 54315 | ID=MS.gene007019.t1.exon7;Parent=MS.gene007019.t1 |
| 51722 | CDS | 54315 | 54368 | 54315 | ID=cds.MS.gene007019.t1;Parent=MS.gene007019.t1 |
| 51722 | exon | 54451 | 54542 | 54451 | ID=MS.gene007019.t1.exon8;Parent=MS.gene007019.t1 |
| 51722 | CDS | 54451 | 54542 | 54451 | ID=cds.MS.gene007019.t1;Parent=MS.gene007019.t1 |
| 51722 | exon | 54635 | 54749 | 54635 | ID=MS.gene007019.t1.exon9;Parent=MS.gene007019.t1 |
| 51722 | CDS | 54635 | 54749 | 54635 | ID=cds.MS.gene007019.t1;Parent=MS.gene007019.t1 |
| 51722 | exon | 54893 | 55037 | 54893 | ID=MS.gene007019.t1.exon10;Parent=MS.gene007019.t1 |
| 51722 | CDS | 54893 | 55037 | 54893 | ID=cds.MS.gene007019.t1;Parent=MS.gene007019.t1 |
| 51722 | exon | 55121 | 55269 | 55121 | ID=MS.gene007019.t1.exon11;Parent=MS.gene007019.t1 |
| 51722 | CDS | 55121 | 55269 | 55121 | ID=cds.MS.gene007019.t1;Parent=MS.gene007019.t1 |
| Gene Sequence |
| Protein sequence |
