Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071678.t1 | XP_003590940.1 | 99.6 | 247 | 1 | 0 | 7 | 253 | 1 | 247 | 4.00E-135 | 490.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071678.t1 | Q7SXW4 | 43.4 | 249 | 131 | 4 | 7 | 250 | 1 | 244 | 1.2e-52 | 208.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071678.t1 | G7I684 | 99.6 | 247 | 1 | 0 | 7 | 253 | 1 | 247 | 2.9e-135 | 490.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049386 | MS.gene071678 | 0.831849 | 1.32E-55 | -1.69E-46 |
| MS.gene059339 | MS.gene071678 | 0.828617 | 8.14E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 54 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGCATGATGCTCGAAATT+TGG | 0.208439 | 1.4:+65030307 | None:intergenic |
| TCCGTTGTTATGGTTCTTAT+TGG | 0.227769 | 1.4:-65034342 | MS.gene071678:CDS |
| CTCAATCTGTTTGGCTTAAG+AGG | 0.312313 | 1.4:-65031103 | MS.gene071678:CDS |
| TTCAGGTCCATGTTACAAAA+TGG | 0.332192 | 1.4:-65031253 | MS.gene071678:CDS |
| TATCCCTTTATCCGTTGTTA+TGG | 0.332373 | 1.4:-65034352 | MS.gene071678:CDS |
| TTCCATTGACACAAAGGTTC+AGG | 0.334198 | 1.4:-65031270 | MS.gene071678:CDS |
| AGAACCATAACAACGGATAA+AGG | 0.351939 | 1.4:+65034348 | None:intergenic |
| ATTCATATTTGTACCTTTGA+AGG | 0.358366 | 1.4:+65030853 | None:intergenic |
| TAGAATAATGGCGGAAGATC+TGG | 0.378579 | 1.4:-65034406 | MS.gene071678:CDS |
| TGGATACTGCAATCAGAGAT+TGG | 0.384123 | 1.4:-65034380 | MS.gene071678:CDS |
| CGGGCACGAAAAGCCTTAGA+AGG | 0.386182 | 1.4:+65034109 | None:intergenic |
| GGATTCGTGGCTTGGCCCTT+TGG | 0.388165 | 1.4:+65033767 | None:intergenic |
| AATGGCGGAAGATCTGGTTT+TGG | 0.395876 | 1.4:-65034400 | MS.gene071678:CDS |
| AGGATTGTTTAGTCTCATCT+TGG | 0.396848 | 1.4:-65031083 | MS.gene071678:CDS |
| GTGCTTGTGGATTCGTGGCT+TGG | 0.403806 | 1.4:+65033759 | None:intergenic |
| AGGTACTTTCTCAATCTGTT+TGG | 0.404129 | 1.4:-65031112 | MS.gene071678:CDS |
| GGATTGTTTAGTCTCATCTT+GGG | 0.407530 | 1.4:-65031082 | MS.gene071678:CDS |
| TTGACATAACCCAACATGAC+TGG | 0.426408 | 1.4:-65030336 | MS.gene071678:CDS |
| ATGCAAATGGGTGGTGGATT+CGG | 0.429326 | 1.4:-65030883 | MS.gene071678:CDS |
| GAACCATAACAACGGATAAA+GGG | 0.432462 | 1.4:+65034349 | None:intergenic |
| GGATACTGCAATCAGAGATT+GGG | 0.436107 | 1.4:-65034379 | MS.gene071678:CDS |
| AACCTTTGTGTCAATGGAAA+AGG | 0.444622 | 1.4:+65031274 | None:intergenic |
| ATCATATCCATGGCCATGTT+CGG | 0.446386 | 1.4:+65033722 | None:intergenic |
| TCTTTCAATGATTATACCTC+AGG | 0.457257 | 1.4:-65033690 | MS.gene071678:intron |
| TGGCAAAGCCCAGTCATGTT+GGG | 0.461277 | 1.4:+65030327 | None:intergenic |
| GACCTGAACCTTTGTGTCAA+TGG | 0.461327 | 1.4:+65031268 | None:intergenic |
| ATTACAATAATAAAGCTTGC+GGG | 0.463442 | 1.4:+65034090 | None:intergenic |
| GCTACGTCAGCAGTCGCTCC+TGG | 0.476096 | 1.4:-65031204 | MS.gene071678:intron |
| TCAGAGAACATTTGTGCTTG+TGG | 0.484350 | 1.4:+65033746 | None:intergenic |
| CATTTGTGCTTGTGGATTCG+TGG | 0.484951 | 1.4:+65033754 | None:intergenic |
| TTGGGAAGAACGCAGAAGCT+TGG | 0.489162 | 1.4:+65034299 | None:intergenic |
| CAAGCTTTATTATTGTAATG+AGG | 0.490585 | 1.4:-65034086 | MS.gene071678:intron |
| TGTCAATGGAAAAGGTATCT+TGG | 0.490898 | 1.4:+65031282 | None:intergenic |
| TACACAAAGAATGATGCAAA+TGG | 0.499016 | 1.4:-65030896 | MS.gene071678:CDS |
| TGGTCTGTTATTCGTTCCAA+AGG | 0.520176 | 1.4:-65033783 | MS.gene071678:CDS |
| TGACATAACCCAACATGACT+GGG | 0.533631 | 1.4:-65030335 | MS.gene071678:CDS |
| CTCTGATCCGAACATGGCCA+TGG | 0.554603 | 1.4:-65033729 | MS.gene071678:CDS |
| TTGGCAAAGCCCAGTCATGT+TGG | 0.556486 | 1.4:+65030326 | None:intergenic |
| GATATCAAAATTGTCAGAGA+AGG | 0.558054 | 1.4:-65034270 | MS.gene071678:CDS |
| ATTCGGATTTGATCCTTCAA+AGG | 0.558196 | 1.4:-65030866 | MS.gene071678:intron |
| GGTCTGTTATTCGTTCCAAA+GGG | 0.570620 | 1.4:-65033782 | MS.gene071678:CDS |
| GATTGTTTAGTCTCATCTTG+GGG | 0.571481 | 1.4:-65031081 | MS.gene071678:CDS |
| AGCTCGGAATTTACGTGCTG+CGG | 0.574470 | 1.4:-65034143 | MS.gene071678:CDS |
| ACACAAAGAATGATGCAAAT+GGG | 0.575278 | 1.4:-65030895 | MS.gene071678:CDS |
| CATTACAATAATAAAGCTTG+CGG | 0.576893 | 1.4:+65034089 | None:intergenic |
| AGAATGATGCAAATGGGTGG+TGG | 0.577037 | 1.4:-65030889 | MS.gene071678:CDS |
| GGCAAGTTATGCTTAGAGCT+CGG | 0.581999 | 1.4:-65034159 | MS.gene071678:CDS |
| ATATCAAAATTGTCAGAGAA+GGG | 0.586701 | 1.4:-65034269 | MS.gene071678:intron |
| AATGTTCTCTGATCCGAACA+TGG | 0.607119 | 1.4:-65033735 | MS.gene071678:CDS |
| ACCAATAAGAACCATAACAA+CGG | 0.636744 | 1.4:+65034341 | None:intergenic |
| ATTGTTTAGTCTCATCTTGG+GGG | 0.651233 | 1.4:-65031080 | MS.gene071678:CDS |
| AGCTAACATCAACTGTGCTG+AGG | 0.659434 | 1.4:+65031224 | None:intergenic |
| GGGCACGAAAAGCCTTAGAA+GGG | 0.660230 | 1.4:+65034110 | None:intergenic |
| CAAAGAATGATGCAAATGGG+TGG | 0.748607 | 1.4:-65030892 | MS.gene071678:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATACAAAAAATTAAAAC+TGG | + | chr1.4:65031335-65031354 | None:intergenic | 10.0% |
| !! | TTAAATTTATGTTTCTTATT+TGG | - | chr1.4:65030671-65030690 | MS.gene071678:intron | 10.0% |
| !!! | TAAATTTATGTTTCTTATTT+GGG | - | chr1.4:65030672-65030691 | MS.gene071678:intron | 10.0% |
| !! | GAACAAATCATAATAAAAAT+AGG | - | chr1.4:65032023-65032042 | MS.gene071678:intron | 15.0% |
| !! | TAAGATTATAAACTAATTCT+AGG | - | chr1.4:65032076-65032095 | MS.gene071678:intron | 15.0% |
| !!! | AAATTTATGTTTCTTATTTG+GGG | - | chr1.4:65030673-65030692 | MS.gene071678:intron | 15.0% |
| !!! | AAGTTTTTTTTTTTTAGCAA+AGG | - | chr1.4:65034019-65034038 | MS.gene071678:intron | 15.0% |
| !!! | ATTTTGTAATTCTATATAGT+TGG | + | chr1.4:65031796-65031815 | None:intergenic | 15.0% |
| !!! | ATTTTTATTATGATTTGTTC+TGG | + | chr1.4:65032023-65032042 | None:intergenic | 15.0% |
| !!! | TTCTTAGTTTTTTTTTCTTA+TGG | - | chr1.4:65031626-65031645 | MS.gene071678:intron | 15.0% |
| !!! | TTTGTTAGATTTTAGAATAA+TGG | - | chr1.4:65030279-65030298 | MS.gene071678:CDS | 15.0% |
| !!! | TTTTTAACCTTTTCTTATAA+AGG | + | chr1.4:65034108-65034127 | None:intergenic | 15.0% |
| !!! | TTTTTAATTTGATTATGTTG+TGG | - | chr1.4:65030505-65030524 | MS.gene071678:intron | 15.0% |
| !! | AATTAACAACTTATTGTTTG+AGG | - | chr1.4:65030729-65030748 | MS.gene071678:intron | 20.0% |
| !! | GAAAAATCAGAGAATAAATT+AGG | - | chr1.4:65031853-65031872 | MS.gene071678:intron | 20.0% |
| !! | TATAACTATAATTTCCAAGT+TGG | + | chr1.4:65033902-65033921 | None:intergenic | 20.0% |
| !!! | AGATACTCTTTTCTTTTTTA+TGG | - | chr1.4:65032109-65032128 | MS.gene071678:intron | 20.0% |
| !!! | ATAATCTTAAAGTATCTCTT+AGG | + | chr1.4:65032065-65032084 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTATATATACGGT+TGG | - | chr1.4:65031341-65031360 | MS.gene071678:intron | 20.0% |
| !!! | CAATTTTTGTTAAAGGAAAA+TGG | - | chr1.4:65030894-65030913 | MS.gene071678:CDS | 20.0% |
| !!! | GTTATTATGTCATTAGATTT+TGG | - | chr1.4:65031055-65031074 | MS.gene071678:intron | 20.0% |
| !!! | TGTTTGTCAATTTTTGTTAA+AGG | - | chr1.4:65030887-65030906 | MS.gene071678:CDS | 20.0% |
| !!! | TTTTCTTAATCTTGTTTTCA+GGG | - | chr1.4:65034315-65034334 | MS.gene071678:CDS | 20.0% |
| ! | AAAGAGGAAAAATCTAGTAT+GGG | + | chr1.4:65032331-65032350 | None:intergenic | 25.0% |
| ! | AAATTCTATTACTGAGTAAC+AGG | - | chr1.4:65033150-65033169 | MS.gene071678:intron | 25.0% |
| ! | AATGGGAGATAAAATAAAAG+GGG | - | chr1.4:65031729-65031748 | MS.gene071678:intron | 25.0% |
| ! | ACTCGTTACAAATTATGATT+GGG | - | chr1.4:65033751-65033770 | MS.gene071678:CDS | 25.0% |
| ! | AGAATGGGAGATAAAATAAA+AGG | - | chr1.4:65031727-65031746 | MS.gene071678:intron | 25.0% |
| ! | ATATCAAAATTGTCAGAGAA+GGG | - | chr1.4:65030428-65030447 | MS.gene071678:intron | 25.0% |
| ! | ATATCAACTAATCAAACAGA+CGG | - | chr1.4:65031440-65031459 | MS.gene071678:intron | 25.0% |
| ! | ATATCTTGACTTATTGTCTA+TGG | - | chr1.4:65031384-65031403 | MS.gene071678:intron | 25.0% |
| ! | ATGTATAACTTTACCAAACT+TGG | - | chr1.4:65032787-65032806 | MS.gene071678:intron | 25.0% |
| ! | ATTACAATAATAAAGCTTGC+GGG | + | chr1.4:65030610-65030629 | None:intergenic | 25.0% |
| ! | ATTCATATTTGTACCTTTGA+AGG | + | chr1.4:65033847-65033866 | None:intergenic | 25.0% |
| ! | CATTACAATAATAAAGCTTG+CGG | + | chr1.4:65030611-65030630 | None:intergenic | 25.0% |
| ! | GAATGGGAGATAAAATAAAA+GGG | - | chr1.4:65031728-65031747 | MS.gene071678:intron | 25.0% |
| ! | GGTTAAAAAAGAATAGTTCT+AGG | - | chr1.4:65034119-65034138 | MS.gene071678:CDS | 25.0% |
| ! | GTAAACAATACAAGTTAGTA+TGG | + | chr1.4:65031127-65031146 | None:intergenic | 25.0% |
| ! | TATCCAAATTGCAGTTATAA+TGG | + | chr1.4:65033728-65033747 | None:intergenic | 25.0% |
| ! | TTAGTATGGCAATTCATAAT+TGG | + | chr1.4:65031113-65031132 | None:intergenic | 25.0% |
| ! | TTGTATTGTTTACTCTTGTT+GGG | - | chr1.4:65031134-65031153 | MS.gene071678:intron | 25.0% |
| ! | TTTCCATTATAACTGCAATT+TGG | - | chr1.4:65033722-65033741 | MS.gene071678:CDS | 25.0% |
| !! | ATTTTTCTTCATCATATCCA+TGG | + | chr1.4:65030988-65031007 | None:intergenic | 25.0% |
| !! | TTAACCTTTTCTTATAAAGG+TGG | + | chr1.4:65034105-65034124 | None:intergenic | 25.0% |
| !! | TTTACATAAGTCTTGTATAC+TGG | - | chr1.4:65033092-65033111 | MS.gene071678:intron | 25.0% |
| !!! | AATAAATTAGGTTGAAGTTG+TGG | - | chr1.4:65031865-65031884 | MS.gene071678:intron | 25.0% |
| !!! | AATTTTGATATCAGGAGTTT+GGG | + | chr1.4:65030419-65030438 | None:intergenic | 25.0% |
| !!! | AGAAAACCTTTAAAACTCAT+CGG | - | chr1.4:65030780-65030799 | MS.gene071678:intron | 25.0% |
| !!! | ATAAGGCTCAATTTTTAAGT+AGG | - | chr1.4:65032210-65032229 | MS.gene071678:intron | 25.0% |
| !!! | ATAATTTTGAAGATCCAACT+TGG | - | chr1.4:65033885-65033904 | MS.gene071678:intron | 25.0% |
| !!! | CAAGCTTTATTATTGTAATG+AGG | - | chr1.4:65030611-65030630 | MS.gene071678:intron | 25.0% |
| !!! | CTTTTCTTAATCTTGTTTTC+AGG | - | chr1.4:65034314-65034333 | MS.gene071678:CDS | 25.0% |
| !!! | GTTAGATTTTAGAATAATGG+CGG | - | chr1.4:65030282-65030301 | MS.gene071678:CDS | 25.0% |
| !!! | GTTGTGGTATTTTAGATAAA+AGG | - | chr1.4:65031881-65031900 | MS.gene071678:intron | 25.0% |
| !!! | TGGTATTTTAGATAAAAGGA+GGG | - | chr1.4:65031885-65031904 | MS.gene071678:intron | 25.0% |
| !!! | TTATGTTGTGGTTTTAATAC+AGG | - | chr1.4:65030517-65030536 | MS.gene071678:intron | 25.0% |
| AAAAGAGACACAAATATTGC+TGG | + | chr1.4:65032630-65032649 | None:intergenic | 30.0% | |
| AATTGTCATGATTGCATTTC+AGG | - | chr1.4:65033565-65033584 | MS.gene071678:intron | 30.0% | |
| ACACAAAGAATGATGCAAAT+GGG | - | chr1.4:65033802-65033821 | MS.gene071678:intron | 30.0% | |
| ACATATGATAGAATACCTAG+TGG | - | chr1.4:65031483-65031502 | MS.gene071678:intron | 30.0% | |
| ACCAATAAGAACCATAACAA+CGG | + | chr1.4:65030359-65030378 | None:intergenic | 30.0% | |
| AGATATATACGTGCTTATTC+AGG | + | chr1.4:65031370-65031389 | None:intergenic | 30.0% | |
| AGATCATAGACAGTCATAAA+TGG | - | chr1.4:65031703-65031722 | MS.gene071678:intron | 30.0% | |
| AGTGAAACTTCAAAATCCAA+CGG | + | chr1.4:65032290-65032309 | None:intergenic | 30.0% | |
| AGTTATACATATGTATGCTC+TGG | + | chr1.4:65032777-65032796 | None:intergenic | 30.0% | |
| ATTTCATGGTCGTAAAAATG+GGG | + | chr1.4:65032753-65032772 | None:intergenic | 30.0% | |
| CACTCGTTACAAATTATGAT+TGG | - | chr1.4:65033750-65033769 | MS.gene071678:CDS | 30.0% | |
| CAGATTTCTTCATAGTATCA+GGG | + | chr1.4:65033002-65033021 | None:intergenic | 30.0% | |
| CATATGATAGAATACCTAGT+GGG | - | chr1.4:65031484-65031503 | MS.gene071678:intron | 30.0% | |
| CATTTCATGGTCGTAAAAAT+GGG | + | chr1.4:65032754-65032773 | None:intergenic | 30.0% | |
| CATTTGTCTAACCAATTCAA+CGG | - | chr1.4:65030856-65030875 | MS.gene071678:intron | 30.0% | |
| CTATCAAAGAAATGTACCAA+GGG | - | chr1.4:65031521-65031540 | MS.gene071678:intron | 30.0% | |
| CTATCATAGATTACTGCTAT+AGG | - | chr1.4:65032237-65032256 | MS.gene071678:intron | 30.0% | |
| CTATGAAAAAGAAGATTACC+AGG | + | chr1.4:65033514-65033533 | None:intergenic | 30.0% | |
| CTTGTATTGTTTACTCTTGT+TGG | - | chr1.4:65031133-65031152 | MS.gene071678:intron | 30.0% | |
| GAAAGAGGAAAAATCTAGTA+TGG | + | chr1.4:65032332-65032351 | None:intergenic | 30.0% | |
| GATATCAAAATTGTCAGAGA+AGG | - | chr1.4:65030427-65030446 | MS.gene071678:intron | 30.0% | |
| GATCATAGACAGTCATAAAT+GGG | - | chr1.4:65031704-65031723 | MS.gene071678:intron | 30.0% | |
| GATTGAATAGGATTCAATCA+TGG | + | chr1.4:65032980-65032999 | None:intergenic | 30.0% | |
| GTAGTGTCATAATGTTAGAT+TGG | - | chr1.4:65031237-65031256 | MS.gene071678:CDS | 30.0% | |
| TACAAAGAGAAGCAAAATGT+AGG | - | chr1.4:65034070-65034089 | MS.gene071678:intron | 30.0% | |
| TACACAAAGAATGATGCAAA+TGG | - | chr1.4:65033801-65033820 | MS.gene071678:intron | 30.0% | |
| TATCAAAGAAATGTACCAAG+GGG | - | chr1.4:65031522-65031541 | MS.gene071678:intron | 30.0% | |
| TCAGATTTCTTCATAGTATC+AGG | + | chr1.4:65033003-65033022 | None:intergenic | 30.0% | |
| TCCAAAACCTAAGTACTATA+AGG | - | chr1.4:65032193-65032212 | MS.gene071678:intron | 30.0% | |
| TCTTTCAATGATTATACCTC+AGG | - | chr1.4:65031007-65031026 | MS.gene071678:intron | 30.0% | |
| ! | AATTGAGCCTTATAGTACTT+AGG | + | chr1.4:65032203-65032222 | None:intergenic | 30.0% |
| ! | ATCAAACAGACGGTTTTTAT+TGG | - | chr1.4:65031450-65031469 | MS.gene071678:intron | 30.0% |
| ! | GTCTATTCCATTTTGTAACA+TGG | + | chr1.4:65033454-65033473 | None:intergenic | 30.0% |
| ! | TATTTGAAACTGCAAAGCTA+AGG | + | chr1.4:65034223-65034242 | None:intergenic | 30.0% |
| ! | TCTGATTTTTCCTATGAGTT+GGG | + | chr1.4:65031844-65031863 | None:intergenic | 30.0% |
| ! | TGTTAAGTTTGTTCCAAGTT+TGG | + | chr1.4:65032803-65032822 | None:intergenic | 30.0% |
| !! | AATGTAATGGCTTTTGTTGT+GGG | - | chr1.4:65030701-65030720 | MS.gene071678:intron | 30.0% |
| !! | CAATTTTGATATCAGGAGTT+TGG | + | chr1.4:65030420-65030439 | None:intergenic | 30.0% |
| !! | CGGTTTTTATTGGTATTGAA+AGG | - | chr1.4:65031460-65031479 | MS.gene071678:intron | 30.0% |
| !! | GTGGTATTTTAGATAAAAGG+AGG | - | chr1.4:65031884-65031903 | MS.gene071678:intron | 30.0% |
| !! | GTGTATTCTAGTTTGATAGA+AGG | - | chr1.4:65030648-65030667 | MS.gene071678:intron | 30.0% |
| !! | TAACTTCCGATGAGTTTTAA+AGG | + | chr1.4:65030789-65030808 | None:intergenic | 30.0% |
| !! | TCTCTGACAATTTTGATATC+AGG | + | chr1.4:65030427-65030446 | None:intergenic | 30.0% |
| !! | TGGAAAATTGTTTGCTTTTG+AGG | + | chr1.4:65031776-65031795 | None:intergenic | 30.0% |
| !!! | AAGTTTTAGTTCAACAACTG+CGG | + | chr1.4:65033178-65033197 | None:intergenic | 30.0% |
| AAACACTAATCCCTGTTTAC+AGG | - | chr1.4:65031973-65031992 | MS.gene071678:intron | 35.0% | |
| AACACTAATCCCTGTTTACA+GGG | - | chr1.4:65031974-65031993 | MS.gene071678:intron | 35.0% | |
| AACCTCTGTTTGACAACATT+GGG | + | chr1.4:65032363-65032382 | None:intergenic | 35.0% | |
| AACCTTTGTGTCAATGGAAA+AGG | + | chr1.4:65033426-65033445 | None:intergenic | 35.0% | |
| AAGAGGAAATATCCATATGG+AGG | - | chr1.4:65033960-65033979 | MS.gene071678:intron | 35.0% | |
| ACAAACTTAACACTGTGTTG+TGG | - | chr1.4:65032811-65032830 | MS.gene071678:intron | 35.0% | |
| ACAATTAGTCACCGTTGAAT+TGG | + | chr1.4:65030870-65030889 | None:intergenic | 35.0% | |
| ACAGTCATAAATGGGAGAAT+GGG | - | chr1.4:65031712-65031731 | MS.gene071678:intron | 35.0% | |
| AGAACCATAACAACGGATAA+AGG | + | chr1.4:65030352-65030371 | None:intergenic | 35.0% | |
| AGGATTGTTTAGTCTCATCT+TGG | - | chr1.4:65033614-65033633 | MS.gene071678:intron | 35.0% | |
| AGGTACTTTCTCAATCTGTT+TGG | - | chr1.4:65033585-65033604 | MS.gene071678:intron | 35.0% | |
| ATAGGATTCAATCATGGCTT+AGG | + | chr1.4:65032974-65032993 | None:intergenic | 35.0% | |
| ATTCGGATTTGATCCTTCAA+AGG | - | chr1.4:65033831-65033850 | MS.gene071678:intron | 35.0% | |
| ATTGTTTAGTCTCATCTTGG+GGG | - | chr1.4:65033617-65033636 | MS.gene071678:intron | 35.0% | |
| ATTTGAGAAGCAGATAACAG+AGG | + | chr1.4:65033375-65033394 | None:intergenic | 35.0% | |
| ATTTGGGGAGAACAATGTAA+TGG | - | chr1.4:65030688-65030707 | MS.gene071678:intron | 35.0% | |
| CATAGTATCAGGGATTGAAT+AGG | + | chr1.4:65032992-65033011 | None:intergenic | 35.0% | |
| CTAACATTATGACACTACGA+GGG | + | chr1.4:65031235-65031254 | None:intergenic | 35.0% | |
| CTCAAGAGGAAATATCCATA+TGG | - | chr1.4:65033957-65033976 | MS.gene071678:intron | 35.0% | |
| GAAAGCAATGTTGTCAATTG+TGG | + | chr1.4:65032543-65032562 | None:intergenic | 35.0% | |
| GAACCATAACAACGGATAAA+GGG | + | chr1.4:65030351-65030370 | None:intergenic | 35.0% | |
| GATTGTTTAGTCTCATCTTG+GGG | - | chr1.4:65033616-65033635 | MS.gene071678:intron | 35.0% | |
| GCATTTCATGGTCGTAAAAA+TGG | + | chr1.4:65032755-65032774 | None:intergenic | 35.0% | |
| GCTATCAAAGAAATGTACCA+AGG | - | chr1.4:65031520-65031539 | MS.gene071678:intron | 35.0% | |
| GGATATTTCCTCTTGAGATT+TGG | + | chr1.4:65033954-65033973 | None:intergenic | 35.0% | |
| GGATTGTTTAGTCTCATCTT+GGG | - | chr1.4:65033615-65033634 | MS.gene071678:intron | 35.0% | |
| TAACCTCTGTTTGACAACAT+TGG | + | chr1.4:65032364-65032383 | None:intergenic | 35.0% | |
| TAACTCTCTGACTTTATCAC+AGG | - | chr1.4:65030810-65030829 | MS.gene071678:intron | 35.0% | |
| TAAGAATCAAAGTTGACCCT+TGG | + | chr1.4:65031612-65031631 | None:intergenic | 35.0% | |
| TAATCTATTCTGAACACCTG+AGG | + | chr1.4:65031026-65031045 | None:intergenic | 35.0% | |
| TACCTGTTTCACTCTTACTT+GGG | - | chr1.4:65033539-65033558 | MS.gene071678:CDS | 35.0% | |
| TATCCCTTTATCCGTTGTTA+TGG | - | chr1.4:65030345-65030364 | MS.gene071678:CDS | 35.0% | |
| TCATAGATTACTGCTATAGG+TGG | - | chr1.4:65032240-65032259 | MS.gene071678:intron | 35.0% | |
| TCCGTTGTTATGGTTCTTAT+TGG | - | chr1.4:65030355-65030374 | MS.gene071678:CDS | 35.0% | |
| TCTAACATTATGACACTACG+AGG | + | chr1.4:65031236-65031255 | None:intergenic | 35.0% | |
| TGTTTGACAACATTGGGATT+GGG | + | chr1.4:65032357-65032376 | None:intergenic | 35.0% | |
| TTCAGGTCCATGTTACAAAA+TGG | - | chr1.4:65033444-65033463 | MS.gene071678:intron | 35.0% | |
| TTGTCAGAGAATGAGTTCAA+GGG | - | chr1.4:65033036-65033055 | MS.gene071678:intron | 35.0% | |
| TTTCATGGTCGTAAAAATGG+GGG | + | chr1.4:65032752-65032771 | None:intergenic | 35.0% | |
| TTTGTCAGAGAATGAGTTCA+AGG | - | chr1.4:65033035-65033054 | MS.gene071678:intron | 35.0% | |
| ! | ACAACTAGTTTGAGCATACA+AGG | - | chr1.4:65031547-65031566 | MS.gene071678:intron | 35.0% |
| ! | AGGGATTAGTGTTTAGTCTT+CGG | + | chr1.4:65031967-65031986 | None:intergenic | 35.0% |
| ! | CAATGTAATGGCTTTTGTTG+TGG | - | chr1.4:65030700-65030719 | MS.gene071678:intron | 35.0% |
| ! | CTCTGATTTTTCCTATGAGT+TGG | + | chr1.4:65031845-65031864 | None:intergenic | 35.0% |
| ! | GCCTTATAGTACTTAGGTTT+TGG | + | chr1.4:65032197-65032216 | None:intergenic | 35.0% |
| ! | GGCTAATTTTATCCCTTCTA+AGG | - | chr1.4:65030575-65030594 | MS.gene071678:intron | 35.0% |
| ! | TACCTTTTCCATTGACACAA+AGG | - | chr1.4:65033421-65033440 | MS.gene071678:intron | 35.0% |
| ! | TACGAAGTTTTGCCAAATAG+AGG | - | chr1.4:65032454-65032473 | MS.gene071678:intron | 35.0% |
| ! | TGTGTCGAGATAACATCTTT+TGG | + | chr1.4:65031673-65031692 | None:intergenic | 35.0% |
| ! | TTCTTTTCTGGATTTGTAGC+AGG | - | chr1.4:65031187-65031206 | MS.gene071678:intron | 35.0% |
| ! | TTGTGGATTGCAGAAAATAG+CGG | + | chr1.4:65032526-65032545 | None:intergenic | 35.0% |
| ! | TTGTTATTGGCTATTGCTGA+AGG | - | chr1.4:65032909-65032928 | MS.gene071678:intron | 35.0% |
| !! | TGGGTGAACTTTTTCTTTTC+TGG | - | chr1.4:65031175-65031194 | MS.gene071678:intron | 35.0% |
| !! | TGTCAATGGAAAAGGTATCT+TGG | + | chr1.4:65033418-65033437 | None:intergenic | 35.0% |
| AAATGTCGAACTGTGACAAG+TGG | - | chr1.4:65034247-65034266 | MS.gene071678:intron | 40.0% | |
| AACAGAGGCAAGGAATACAA+GGG | + | chr1.4:65033360-65033379 | None:intergenic | 40.0% | |
| AACCCAAGTAAGAGTGAAAC+AGG | + | chr1.4:65033544-65033563 | None:intergenic | 40.0% | |
| AATGTTCTCTGATCCGAACA+TGG | - | chr1.4:65030962-65030981 | MS.gene071678:intron | 40.0% | |
| AATTAGCCAATTTCCCAGGA+AGG | + | chr1.4:65034147-65034166 | None:intergenic | 40.0% | |
| ACAGCTATAAGTGTGTACCA+AGG | - | chr1.4:65031592-65031611 | MS.gene071678:intron | 40.0% | |
| ATCATATCCATGGCCATGTT+CGG | + | chr1.4:65030978-65030997 | None:intergenic | 40.0% | |
| ATCCCAATGTTGTCAAACAG+AGG | - | chr1.4:65032358-65032377 | MS.gene071678:intron | 40.0% | |
| ATGTATGCTCTGGCATTTCA+TGG | + | chr1.4:65032767-65032786 | None:intergenic | 40.0% | |
| CAAAGAATGATGCAAATGGG+TGG | - | chr1.4:65033805-65033824 | MS.gene071678:intron | 40.0% | |
| CAATCTTTGTAGCAAGCAGA+TGG | + | chr1.4:65031413-65031432 | None:intergenic | 40.0% | |
| CAGCTATAAGTGTGTACCAA+GGG | - | chr1.4:65031593-65031612 | MS.gene071678:intron | 40.0% | |
| CATTCACAATCCCAACTCAT+AGG | - | chr1.4:65031831-65031850 | MS.gene071678:intron | 40.0% | |
| CCTCTTGAGATTTGGAGAAA+GGG | + | chr1.4:65033946-65033965 | None:intergenic | 40.0% | |
| CTAAATGTGAGTAACCCACT+AGG | + | chr1.4:65031501-65031520 | None:intergenic | 40.0% | |
| CTACCTGTTTCACTCTTACT+TGG | - | chr1.4:65033538-65033557 | MS.gene071678:CDS | 40.0% | |
| CTGTGTAATCCCTGTAAACA+GGG | + | chr1.4:65031986-65032005 | None:intergenic | 40.0% | |
| CTGTTTGACAACATTGGGAT+TGG | + | chr1.4:65032358-65032377 | None:intergenic | 40.0% | |
| GACAGTCATAAATGGGAGAA+TGG | - | chr1.4:65031711-65031730 | MS.gene071678:intron | 40.0% | |
| GACTGTCTATGATCTGCAAA+AGG | + | chr1.4:65031698-65031717 | None:intergenic | 40.0% | |
| GAGACACAAATATTGCTGGA+AGG | + | chr1.4:65032626-65032645 | None:intergenic | 40.0% | |
| GAGGAAAAATCTAGTATGGG+AGG | + | chr1.4:65032328-65032347 | None:intergenic | 40.0% | |
| GCTAGAACAGAGGTTGTTAT+TGG | - | chr1.4:65032896-65032915 | MS.gene071678:intron | 40.0% | |
| GCTGCCACCTTTATAAGAAA+AGG | - | chr1.4:65034098-65034117 | MS.gene071678:CDS | 40.0% | |
| GGAAATTGGCTAATTGCCTT+GGG | - | chr1.4:65034152-65034171 | MS.gene071678:CDS | 40.0% | |
| GGATACTGCAATCAGAGATT+GGG | - | chr1.4:65030318-65030337 | MS.gene071678:CDS | 40.0% | |
| GGTACACACTTATAGCTGTT+GGG | + | chr1.4:65031591-65031610 | None:intergenic | 40.0% | |
| GGTCTGTTATTCGTTCCAAA+GGG | - | chr1.4:65030915-65030934 | MS.gene071678:intron | 40.0% | |
| GTTTGACAACATTGGGATTG+GGG | + | chr1.4:65032356-65032375 | None:intergenic | 40.0% | |
| TAACAGAGGCAAGGAATACA+AGG | + | chr1.4:65033361-65033380 | None:intergenic | 40.0% | |
| TAAGCTACAGAACCTCCATA+TGG | + | chr1.4:65033975-65033994 | None:intergenic | 40.0% | |
| TCAAACAGAGGTTATAGCAG+TGG | - | chr1.4:65032370-65032389 | MS.gene071678:intron | 40.0% | |
| TCAGAGAACATTTGTGCTTG+TGG | + | chr1.4:65030954-65030973 | None:intergenic | 40.0% | |
| TCAGCATGATGCTCGAAATT+TGG | + | chr1.4:65034393-65034412 | None:intergenic | 40.0% | |
| TCCTCTTGAGATTTGGAGAA+AGG | + | chr1.4:65033947-65033966 | None:intergenic | 40.0% | |
| TCTGTGTAATCCCTGTAAAC+AGG | + | chr1.4:65031987-65032006 | None:intergenic | 40.0% | |
| TGAATTTCGCTATGCTAGAG+AGG | + | chr1.4:65032497-65032516 | None:intergenic | 40.0% | |
| TGACATAACCCAACATGACT+GGG | - | chr1.4:65034362-65034381 | MS.gene071678:CDS | 40.0% | |
| TGAGATGAAGTAGCAGATTG+AGG | - | chr1.4:65032946-65032965 | MS.gene071678:intron | 40.0% | |
| TGGATACTGCAATCAGAGAT+TGG | - | chr1.4:65030317-65030336 | MS.gene071678:CDS | 40.0% | |
| TGGTACACACTTATAGCTGT+TGG | + | chr1.4:65031592-65031611 | None:intergenic | 40.0% | |
| TGGTCTGTTATTCGTTCCAA+AGG | - | chr1.4:65030914-65030933 | MS.gene071678:intron | 40.0% | |
| TTCATGGTCGTAAAAATGGG+GGG | + | chr1.4:65032751-65032770 | None:intergenic | 40.0% | |
| TTCCATTGACACAAAGGTTC+AGG | - | chr1.4:65033427-65033446 | MS.gene071678:intron | 40.0% | |
| TTGACATAACCCAACATGAC+TGG | - | chr1.4:65034361-65034380 | MS.gene071678:CDS | 40.0% | |
| TTGGGATGCTATACAAGCAA+GGG | - | chr1.4:65034170-65034189 | MS.gene071678:intron | 40.0% | |
| ! | CTCAATCTGTTTGGCTTAAG+AGG | - | chr1.4:65033594-65033613 | MS.gene071678:intron | 40.0% |
| ! | CTGCTTGCTACAAAGATTGA+GGG | - | chr1.4:65031414-65031433 | MS.gene071678:intron | 40.0% |
| ! | TAGAATAATGGCGGAAGATC+TGG | - | chr1.4:65030291-65030310 | MS.gene071678:CDS | 40.0% |
| ! | TCTGCTTGCTACAAAGATTG+AGG | - | chr1.4:65031413-65031432 | MS.gene071678:intron | 40.0% |
| !! | GCAGACTCTTACTTTTGCTT+GGG | - | chr1.4:65031156-65031175 | MS.gene071678:intron | 40.0% |
| !! | GGTTCATGATGGATCATGTT+TGG | - | chr1.4:65032261-65032280 | MS.gene071678:intron | 40.0% |
| AGAAGCAGATAACAGAGGCA+AGG | + | chr1.4:65033370-65033389 | None:intergenic | 45.0% | |
| AGAATGATGCAAATGGGTGG+TGG | - | chr1.4:65033808-65033827 | MS.gene071678:intron | 45.0% | |
| AGATTTGGAGAAAGGGAGGA+GGG | + | chr1.4:65033939-65033958 | None:intergenic | 45.0% | |
| AGCTAACATCAACTGTGCTG+AGG | + | chr1.4:65033476-65033495 | None:intergenic | 45.0% | |
| AGGCAATTAGCCAATTTCCC+AGG | + | chr1.4:65034151-65034170 | None:intergenic | 45.0% | |
| ATATCGTTGCCTAGCAGGAA+AGG | - | chr1.4:65033293-65033312 | MS.gene071678:intron | 45.0% | |
| CAACTAAAGCCTTTCCTGCT+AGG | + | chr1.4:65033305-65033324 | None:intergenic | 45.0% | |
| CATTTGTGCTTGTGGATTCG+TGG | + | chr1.4:65030946-65030965 | None:intergenic | 45.0% | |
| CCACGATAGCTACCAGAATT+AGG | - | chr1.4:65032874-65032893 | MS.gene071678:intron | 45.0% | |
| CCAGAATTAGGCTAGAACAG+AGG | - | chr1.4:65032886-65032905 | MS.gene071678:intron | 45.0% | |
| CCCTTTCTCCAAATCTCAAG+AGG | - | chr1.4:65033943-65033962 | MS.gene071678:intron | 45.0% | |
| CCTAATTCTGGTAGCTATCG+TGG | + | chr1.4:65032877-65032896 | None:intergenic | 45.0% | |
| CCTCTGTTCTAGCCTAATTC+TGG | + | chr1.4:65032889-65032908 | None:intergenic | 45.0% | |
| CTATACAAGCAAGGGGTTCA+GGG | - | chr1.4:65034178-65034197 | MS.gene071678:intron | 45.0% | |
| CTCATCTTGGGGGAAGAAAA+TGG | - | chr1.4:65033627-65033646 | MS.gene071678:intron | 45.0% | |
| CTGCTATAGGTGGTTCATGA+TGG | - | chr1.4:65032250-65032269 | MS.gene071678:intron | 45.0% | |
| CTTGAGATTTGGAGAAAGGG+AGG | + | chr1.4:65033943-65033962 | None:intergenic | 45.0% | |
| CTTGCTTGTATAGCATCCCA+AGG | + | chr1.4:65034171-65034190 | None:intergenic | 45.0% | |
| CTTGGGATGCTATACAAGCA+AGG | - | chr1.4:65034169-65034188 | MS.gene071678:intron | 45.0% | |
| GACCTGAACCTTTGTGTCAA+TGG | + | chr1.4:65033432-65033451 | None:intergenic | 45.0% | |
| GGCAAGTTATGCTTAGAGCT+CGG | - | chr1.4:65030538-65030557 | MS.gene071678:intron | 45.0% | |
| GGGAAATTGGCTAATTGCCT+TGG | - | chr1.4:65034151-65034170 | MS.gene071678:CDS | 45.0% | |
| GTAGCTTAACTACTTCGCTG+AGG | - | chr1.4:65033987-65034006 | MS.gene071678:intron | 45.0% | |
| TATAGCAGTGGTATCTGCTC+TGG | - | chr1.4:65032382-65032401 | MS.gene071678:intron | 45.0% | |
| TCAAACTAGTTGTGACCCCT+TGG | + | chr1.4:65031540-65031559 | None:intergenic | 45.0% | |
| TGGGATGCTATACAAGCAAG+GGG | - | chr1.4:65034171-65034190 | MS.gene071678:intron | 45.0% | |
| ! | GTGCTGCTATAGCCTCTATT+TGG | + | chr1.4:65032469-65032488 | None:intergenic | 45.0% |
| ! | TATCGTGGCCAATCCTTTTG+TGG | + | chr1.4:65032862-65032881 | None:intergenic | 45.0% |
| !! | AATAGTTCTAGGCTCCTTCC+TGG | - | chr1.4:65034130-65034149 | MS.gene071678:CDS | 45.0% |
| !! | AATGGCGGAAGATCTGGTTT+TGG | - | chr1.4:65030297-65030316 | MS.gene071678:CDS | 45.0% |
| !! | ATAGTTCTAGGCTCCTTCCT+GGG | - | chr1.4:65034131-65034150 | MS.gene071678:CDS | 45.0% |
| !! | ATGCAAATGGGTGGTGGATT+CGG | - | chr1.4:65033814-65033833 | MS.gene071678:intron | 45.0% |
| !! | GGCAGACTCTTACTTTTGCT+TGG | - | chr1.4:65031155-65031174 | MS.gene071678:intron | 45.0% |
| !!! | TTTAATTTTTTGTATATATA+CGG | - | chr1.4:65031337-65031356 | MS.gene071678:intron | 5.0% |
| ACCCTAACCAACAGTTGCTC+TGG | - | chr1.4:65032677-65032696 | MS.gene071678:intron | 50.0% | |
| ACTCGATATCGTTGCCTAGC+AGG | - | chr1.4:65033288-65033307 | MS.gene071678:intron | 50.0% | |
| AGCTCGGAATTTACGTGCTG+CGG | - | chr1.4:65030554-65030573 | MS.gene071678:intron | 50.0% | |
| CATTGGGATTGGGGAGAAAG+AGG | + | chr1.4:65032347-65032366 | None:intergenic | 50.0% | |
| CTCCACTGCCACAAAAGGAT+TGG | - | chr1.4:65032851-65032870 | MS.gene071678:intron | 50.0% | |
| GAGATTTGGAGAAAGGGAGG+AGG | + | chr1.4:65033940-65033959 | None:intergenic | 50.0% | |
| GCTATACAAGCAAGGGGTTC+AGG | - | chr1.4:65034177-65034196 | MS.gene071678:intron | 50.0% | |
| GGATCATGTTTGGTTGCCGT+TGG | - | chr1.4:65032271-65032290 | MS.gene071678:intron | 50.0% | |
| GGGCACGAAAAGCCTTAGAA+GGG | + | chr1.4:65030590-65030609 | None:intergenic | 50.0% | |
| TAGGCTCCTTCCTGGGAAAT+TGG | - | chr1.4:65034138-65034157 | MS.gene071678:CDS | 50.0% | |
| TCAACTGCCAGAGCAACTGT+TGG | + | chr1.4:65032687-65032706 | None:intergenic | 50.0% | |
| TCGTAAAAATGGGGGGCAGA+GGG | + | chr1.4:65032744-65032763 | None:intergenic | 50.0% | |
| TGGCAAAGCCCAGTCATGTT+GGG | + | chr1.4:65034373-65034392 | None:intergenic | 50.0% | |
| TGGTATCTGCTCTGGCATAG+TGG | - | chr1.4:65032390-65032409 | MS.gene071678:intron | 50.0% | |
| TGTTCCTCCACTGCCACAAA+AGG | - | chr1.4:65032846-65032865 | MS.gene071678:intron | 50.0% | |
| TTGGCAAAGCCCAGTCATGT+TGG | + | chr1.4:65034374-65034393 | None:intergenic | 50.0% | |
| TTGGGAAGAACGCAGAAGCT+TGG | + | chr1.4:65030401-65030420 | None:intergenic | 50.0% | |
| ! | AACTGTTGGTTAGGGTGGCT+GGG | + | chr1.4:65032673-65032692 | None:intergenic | 50.0% |
| ! | AGAGCAACTGTTGGTTAGGG+TGG | + | chr1.4:65032678-65032697 | None:intergenic | 50.0% |
| ! | CAATCCTTTTGTGGCAGTGG+AGG | + | chr1.4:65032853-65032872 | None:intergenic | 50.0% |
| ! | CTTTTGTGTGTCCCAGACGT+TGG | - | chr1.4:65032645-65032664 | MS.gene071678:intron | 50.0% |
| ! | GCCAGAGCAACTGTTGGTTA+GGG | + | chr1.4:65032681-65032700 | None:intergenic | 50.0% |
| ! | TGCCAGAGCAACTGTTGGTT+AGG | + | chr1.4:65032682-65032701 | None:intergenic | 50.0% |
| AAAAATGGGGGGCAGAGGGA+GGG | + | chr1.4:65032740-65032759 | None:intergenic | 55.0% | |
| ACAAGCAAGGGGTTCAGGGT+AGG | - | chr1.4:65034182-65034201 | MS.gene071678:intron | 55.0% | |
| ACTCGCAACGGCCAGGTAAA+GGG | + | chr1.4:65032601-65032620 | None:intergenic | 55.0% | |
| CGGGCACGAAAAGCCTTAGA+AGG | + | chr1.4:65030591-65030610 | None:intergenic | 55.0% | |
| CTCTGATCCGAACATGGCCA+TGG | - | chr1.4:65030968-65030987 | MS.gene071678:intron | 55.0% | |
| GGAGGAAGGGAAGAAGGAAG+AGG | + | chr1.4:65032569-65032588 | None:intergenic | 55.0% | |
| GTCGTAAAAATGGGGGGCAG+AGG | + | chr1.4:65032745-65032764 | None:intergenic | 55.0% | |
| GTGCTTGTGGATTCGTGGCT+TGG | + | chr1.4:65030941-65030960 | None:intergenic | 55.0% | |
| TAAAAATGGGGGGCAGAGGG+AGG | + | chr1.4:65032741-65032760 | None:intergenic | 55.0% | |
| TGCTGGAAGGAGACTCGCAA+CGG | + | chr1.4:65032613-65032632 | None:intergenic | 55.0% | |
| TGGCAGTGGAGGAACAGAGT+TGG | + | chr1.4:65032842-65032861 | None:intergenic | 55.0% | |
| ! | CAACTGTTGGTTAGGGTGGC+TGG | + | chr1.4:65032674-65032693 | None:intergenic | 55.0% |
| ! | GGCCAATCCTTTTGTGGCAG+TGG | + | chr1.4:65032856-65032875 | None:intergenic | 55.0% |
| ! | GTGGAGGAACAGAGTTGGTC+AGG | + | chr1.4:65032837-65032856 | None:intergenic | 55.0% |
| AAAATGGGGGGCAGAGGGAG+GGG | + | chr1.4:65032739-65032758 | None:intergenic | 60.0% | |
| CTCGCAACGGCCAGGTAAAG+GGG | + | chr1.4:65032600-65032619 | None:intergenic | 60.0% | |
| GACTCGCAACGGCCAGGTAA+AGG | + | chr1.4:65032602-65032621 | None:intergenic | 60.0% | |
| GTGGCTGGGTTCCAACGTCT+GGG | + | chr1.4:65032659-65032678 | None:intergenic | 60.0% | |
| TCGCAACGGCCAGGTAAAGG+GGG | + | chr1.4:65032599-65032618 | None:intergenic | 60.0% | |
| ! | GGATTCGTGGCTTGGCCCTT+TGG | + | chr1.4:65030933-65030952 | None:intergenic | 60.0% |
| AAATGGGGGGCAGAGGGAGG+GGG | + | chr1.4:65032738-65032757 | None:intergenic | 65.0% | |
| ACGGCCAGGTAAAGGGGGTG+CGG | + | chr1.4:65032594-65032613 | None:intergenic | 65.0% | |
| GAAGGAGACTCGCAACGGCC+AGG | + | chr1.4:65032608-65032627 | None:intergenic | 65.0% | |
| GCTACGTCAGCAGTCGCTCC+TGG | - | chr1.4:65033493-65033512 | MS.gene071678:intron | 65.0% | |
| GGTGGCTGGGTTCCAACGTC+TGG | + | chr1.4:65032660-65032679 | None:intergenic | 65.0% | |
| AATGGGGGGCAGAGGGAGGG+GGG | + | chr1.4:65032737-65032756 | None:intergenic | 70.0% | |
| GCGGGCGGAGGAAGGGAAGA+AGG | + | chr1.4:65032575-65032594 | None:intergenic | 70.0% | |
| ! | CCAGGTAAAGGGGGTGCGGG+CGG | + | chr1.4:65032590-65032609 | None:intergenic | 70.0% |
| ! | CGGCCAGGTAAAGGGGGTGC+GGG | + | chr1.4:65032593-65032612 | None:intergenic | 70.0% |
| ATGGGGGGCAGAGGGAGGGG+GGG | + | chr1.4:65032736-65032755 | None:intergenic | 75.0% | |
| CAGAGGGAGGGGGGGGATGG+GGG | + | chr1.4:65032728-65032747 | None:intergenic | 75.0% | |
| CCGCCCGCACCCCCTTTACC+TGG | - | chr1.4:65032587-65032606 | MS.gene071678:intron | 75.0% | |
| GCAGAGGGAGGGGGGGGATG+GGG | + | chr1.4:65032729-65032748 | None:intergenic | 75.0% | |
| GGCAGAGGGAGGGGGGGGAT+GGG | + | chr1.4:65032730-65032749 | None:intergenic | 75.0% | |
| GGGGATGGGGGAGGGCGAAG+TGG | + | chr1.4:65032716-65032735 | None:intergenic | 75.0% | |
| GGGGGAGGGCGAAGTGGTGC+AGG | + | chr1.4:65032710-65032729 | None:intergenic | 75.0% | |
| ! | AAGGGGGTGCGGGCGGAGGA+AGG | + | chr1.4:65032583-65032602 | None:intergenic | 75.0% |
| ! | AGGGGGTGCGGGCGGAGGAA+GGG | + | chr1.4:65032582-65032601 | None:intergenic | 75.0% |
| ! | GGTAAAGGGGGTGCGGGCGG+AGG | + | chr1.4:65032587-65032606 | None:intergenic | 75.0% |
| ! | AGGGAGGGGGGGGATGGGGG+AGG | + | chr1.4:65032725-65032744 | None:intergenic | 80.0% |
| ! | GGGAGGGGGGGGATGGGGGA+GGG | + | chr1.4:65032724-65032743 | None:intergenic | 80.0% |
| ! | GGGCAGAGGGAGGGGGGGGA+TGG | + | chr1.4:65032731-65032750 | None:intergenic | 80.0% |
| ! | TGGGGGGCAGAGGGAGGGGG+GGG | + | chr1.4:65032735-65032754 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 65030279 | 65034440 | 65030279 | ID=MS.gene071678 |
| chr1.4 | mRNA | 65030279 | 65034440 | 65030279 | ID=MS.gene071678.t1;Parent=MS.gene071678 |
| chr1.4 | exon | 65034270 | 65034440 | 65034270 | ID=MS.gene071678.t1.exon1;Parent=MS.gene071678.t1 |
| chr1.4 | CDS | 65034270 | 65034440 | 65034270 | ID=cds.MS.gene071678.t1;Parent=MS.gene071678.t1 |
| chr1.4 | exon | 65034087 | 65034180 | 65034087 | ID=MS.gene071678.t1.exon2;Parent=MS.gene071678.t1 |
| chr1.4 | CDS | 65034087 | 65034180 | 65034087 | ID=cds.MS.gene071678.t1;Parent=MS.gene071678.t1 |
| chr1.4 | exon | 65033691 | 65033810 | 65033691 | ID=MS.gene071678.t1.exon3;Parent=MS.gene071678.t1 |
| chr1.4 | CDS | 65033691 | 65033810 | 65033691 | ID=cds.MS.gene071678.t1;Parent=MS.gene071678.t1 |
| chr1.4 | exon | 65033511 | 65033559 | 65033511 | ID=MS.gene071678.t1.exon4;Parent=MS.gene071678.t1 |
| chr1.4 | CDS | 65033511 | 65033559 | 65033511 | ID=cds.MS.gene071678.t1;Parent=MS.gene071678.t1 |
| chr1.4 | exon | 65031205 | 65031304 | 65031205 | ID=MS.gene071678.t1.exon5;Parent=MS.gene071678.t1 |
| chr1.4 | CDS | 65031205 | 65031304 | 65031205 | ID=cds.MS.gene071678.t1;Parent=MS.gene071678.t1 |
| chr1.4 | exon | 65031071 | 65031132 | 65031071 | ID=MS.gene071678.t1.exon6;Parent=MS.gene071678.t1 |
| chr1.4 | CDS | 65031071 | 65031132 | 65031071 | ID=cds.MS.gene071678.t1;Parent=MS.gene071678.t1 |
| chr1.4 | exon | 65030867 | 65030928 | 65030867 | ID=MS.gene071678.t1.exon7;Parent=MS.gene071678.t1 |
| chr1.4 | CDS | 65030867 | 65030928 | 65030867 | ID=cds.MS.gene071678.t1;Parent=MS.gene071678.t1 |
| chr1.4 | exon | 65030279 | 65030383 | 65030279 | ID=MS.gene071678.t1.exon8;Parent=MS.gene071678.t1 |
| chr1.4 | CDS | 65030279 | 65030383 | 65030279 | ID=cds.MS.gene071678.t1;Parent=MS.gene071678.t1 |
| Gene Sequence |
| Protein sequence |
