Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072054.t1 | XP_003592967.1 | 94.7 | 457 | 15 | 1 | 1 | 448 | 33 | 489 | 7.50E-153 | 550.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072054.t1 | O49429 | 47.3 | 241 | 93 | 7 | 25 | 243 | 14 | 242 | 2.5e-48 | 194.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072054.t1 | G7INP0 | 94.7 | 457 | 15 | 1 | 1 | 448 | 33 | 489 | 5.4e-153 | 550.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056009 | MS.gene072054 | 0.820269 | 7.50E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene045065 | MS.gene072054 | PPI |
MS.gene75426 | MS.gene072054 | PPI |
MS.gene72993 | MS.gene072054 | PPI |
MS.gene62799 | MS.gene072054 | PPI |
MS.gene99648 | MS.gene072054 | PPI |
MS.gene92318 | MS.gene072054 | PPI |
MS.gene024895 | MS.gene072054 | PPI |
MS.gene011421 | MS.gene072054 | PPI |
MS.gene000128 | MS.gene072054 | PPI |
MS.gene02591 | MS.gene072054 | PPI |
MS.gene033382 | MS.gene072054 | PPI |
MS.gene013822 | MS.gene072054 | PPI |
MS.gene80094 | MS.gene072054 | PPI |
MS.gene91416 | MS.gene072054 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072054.t1 | MTR_2g006210 | 90.787 | 445 | 24 | 2 | 17 | 448 | 49 | 489 | 0.0 | 807 |
MS.gene072054.t1 | MTR_2g006240 | 77.095 | 179 | 38 | 1 | 1 | 179 | 1 | 176 | 2.90e-89 | 270 |
MS.gene072054.t1 | MTR_2g011000 | 53.968 | 126 | 57 | 1 | 83 | 208 | 66 | 190 | 2.70e-39 | 141 |
MS.gene072054.t1 | MTR_4g120340 | 54.464 | 112 | 50 | 1 | 83 | 194 | 80 | 190 | 1.65e-37 | 138 |
MS.gene072054.t1 | MTR_1g041745 | 45.223 | 157 | 69 | 4 | 55 | 198 | 35 | 187 | 4.07e-31 | 119 |
MS.gene072054.t1 | MTR_1g075460 | 49.558 | 113 | 56 | 1 | 86 | 198 | 94 | 205 | 3.60e-29 | 114 |
MS.gene072054.t1 | MTR_3g055620 | 84.127 | 63 | 10 | 0 | 226 | 288 | 21 | 83 | 1.10e-27 | 105 |
MS.gene072054.t1 | MTR_1g041745 | 57.292 | 96 | 40 | 1 | 86 | 181 | 76 | 170 | 1.76e-26 | 105 |
MS.gene072054.t1 | MTR_2g078090 | 45.133 | 113 | 60 | 2 | 83 | 195 | 86 | 196 | 4.05e-23 | 100 |
MS.gene072054.t1 | MTR_1g009840 | 32.653 | 343 | 171 | 15 | 6 | 322 | 5 | 313 | 4.49e-23 | 99.8 |
MS.gene072054.t1 | MTR_6g043040 | 37.864 | 103 | 54 | 3 | 89 | 186 | 72 | 169 | 1.66e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072054.t1 | AT4G20020 | 44.361 | 266 | 114 | 8 | 15 | 257 | 1 | 255 | 5.66e-61 | 204 |
MS.gene072054.t1 | AT4G20020 | 44.361 | 266 | 114 | 8 | 15 | 257 | 1 | 255 | 1.57e-60 | 203 |
MS.gene072054.t1 | AT5G44780 | 54.545 | 143 | 61 | 2 | 59 | 197 | 45 | 187 | 6.10e-42 | 158 |
MS.gene072054.t1 | AT1G11430 | 60.909 | 110 | 42 | 1 | 83 | 192 | 78 | 186 | 3.05e-40 | 144 |
MS.gene072054.t1 | AT3G06790 | 57.143 | 112 | 46 | 2 | 83 | 194 | 85 | 194 | 1.82e-36 | 134 |
MS.gene072054.t1 | AT3G06790 | 57.143 | 112 | 46 | 2 | 83 | 194 | 85 | 194 | 2.69e-36 | 134 |
MS.gene072054.t1 | AT2G35240 | 45.833 | 144 | 64 | 3 | 86 | 227 | 90 | 221 | 2.09e-31 | 120 |
MS.gene072054.t1 | AT1G32580 | 43.791 | 153 | 72 | 3 | 86 | 236 | 87 | 227 | 8.33e-31 | 119 |
MS.gene072054.t1 | AT3G15000 | 36.410 | 195 | 112 | 5 | 2 | 195 | 15 | 198 | 3.73e-25 | 107 |
MS.gene072054.t1 | AT1G72530 | 38.318 | 107 | 64 | 2 | 86 | 192 | 48 | 152 | 2.04e-17 | 80.5 |
MS.gene072054.t1 | AT1G72530 | 36.937 | 111 | 64 | 3 | 86 | 192 | 48 | 156 | 2.98e-15 | 74.3 |
MS.gene072054.t1 | AT1G53260 | 46.774 | 62 | 33 | 0 | 134 | 195 | 2 | 63 | 1.05e-11 | 65.1 |
MS.gene072054.t1 | AT1G53260 | 47.458 | 59 | 31 | 0 | 134 | 192 | 2 | 60 | 1.24e-11 | 65.5 |
Find 150 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGCATGATTATTCCCCTTC+TGG | 0.152275 | 2.4:-76134465 | None:intergenic |
ACAAATACCTTCAAATTTCT+TGG | 0.193516 | 2.4:-76133066 | None:intergenic |
GCTGAATCAAACCGGATATT+TGG | 0.205342 | 2.4:-76134010 | None:intergenic |
TATGCGCCGCAGCAAAATTT+TGG | 0.234811 | 2.4:+76134301 | MS.gene072054:CDS |
GATGAAATAGAACCGGTAAT+TGG | 0.256818 | 2.4:-76132598 | None:intergenic |
AGGTGGAGGTTTGTTATCTC+TGG | 0.258166 | 2.4:-76132809 | None:intergenic |
GTGCTAAGGGTTTCAATATC+AGG | 0.262167 | 2.4:+76132863 | MS.gene072054:CDS |
CGACCTCCACCAGTACAATT+TGG | 0.262627 | 2.4:+76133791 | MS.gene072054:CDS |
TCGCTTTCGGTCCCAATTAC+CGG | 0.272059 | 2.4:+76132586 | MS.gene072054:CDS |
CGGAGTTATCTTTGTGTTGC+CGG | 0.290339 | 2.4:+76133496 | MS.gene072054:CDS |
TGAACGCCGTCGACGACGTT+TGG | 0.320333 | 2.4:-76132643 | None:intergenic |
GGATTTCAAACCATCATATA+TGG | 0.330866 | 2.4:+76134426 | MS.gene072054:CDS |
GAACGCCGTCGACGACGTTT+GGG | 0.334529 | 2.4:-76132642 | None:intergenic |
AGCTACTGCGACTTCGCTTT+CGG | 0.360324 | 2.4:+76132573 | MS.gene072054:CDS |
GTGCTTGATCATAGCTCTGC+TGG | 0.368496 | 2.4:-76134051 | None:intergenic |
GAGGGATTCCCTCGGTTGTT+TGG | 0.372916 | 2.4:-76133860 | None:intergenic |
ATGCGCCACGGCAGAACTTT+GGG | 0.375645 | 2.4:+76134251 | MS.gene072054:CDS |
AGCATGATTATTCCCCTTCT+GGG | 0.387365 | 2.4:-76134464 | None:intergenic |
CCAAGGGATGGTAGAAACTA+TGG | 0.387810 | 2.4:+76133905 | MS.gene072054:CDS |
TTCTTTCTCCTTGTCCTGGC+GGG | 0.390261 | 2.4:-76134324 | None:intergenic |
CCTCCATACTGCTTGTTCAC+AGG | 0.391130 | 2.4:-76133533 | None:intergenic |
TATGCGCCACGGCAGAACTT+TGG | 0.400286 | 2.4:+76134250 | MS.gene072054:CDS |
ATGAAATAGAACCGGTAATT+GGG | 0.400337 | 2.4:-76132597 | None:intergenic |
TTTCCACCTCAACAGAACTA+TGG | 0.401446 | 2.4:+76133941 | MS.gene072054:CDS |
TGCTTGATCATAGCTCTGCT+GGG | 0.408969 | 2.4:-76134050 | None:intergenic |
ACCGGATATTTGGTTGTTGT+TGG | 0.414885 | 2.4:-76134000 | None:intergenic |
GGAATCCCTCTTACAACAAT+CGG | 0.421869 | 2.4:+76133873 | MS.gene072054:CDS |
GTACAATTTGGGAGAAATCT+AGG | 0.426083 | 2.4:+76133803 | MS.gene072054:CDS |
TTTCTTCTTTCTCCTTGTCC+TGG | 0.430267 | 2.4:-76134328 | None:intergenic |
GACCTCCACCAGTACAATTT+GGG | 0.430347 | 2.4:+76133792 | MS.gene072054:CDS |
AGGACCATAGGTTTGCTGTT+TGG | 0.430424 | 2.4:-76134164 | None:intergenic |
TATCCACCCAAACAAAACTA+TGG | 0.437816 | 2.4:+76134082 | MS.gene072054:CDS |
GACCCTGTGAACAAGCAGTA+TGG | 0.438673 | 2.4:+76133530 | MS.gene072054:CDS |
CGAATCATTTCTTCAGGTGG+AGG | 0.439284 | 2.4:-76132823 | None:intergenic |
TATGCGCCACAGCAGAACTT+TGG | 0.449668 | 2.4:+76134352 | MS.gene072054:CDS |
TTTCTTCTTTCTCCTTCTCC+CGG | 0.453717 | 2.4:-76134226 | None:intergenic |
GAAGAGTCCAAGAAATTTGA+AGG | 0.456510 | 2.4:+76133059 | MS.gene072054:CDS |
CAGGAGGCGGAAATCTTTGT+TGG | 0.457098 | 2.4:-76134504 | None:intergenic |
GCCAACAACAACCAAATATC+CGG | 0.458194 | 2.4:+76133999 | MS.gene072054:CDS |
TCAAATTCCTCCATATATGA+TGG | 0.460060 | 2.4:-76134436 | None:intergenic |
TTTCCTCTTTCTCCCTGTCC+CGG | 0.461374 | 2.4:-76134379 | None:intergenic |
TATCCACCACAGCAGAGCTT+TGG | 0.463958 | 2.4:+76134199 | MS.gene072054:CDS |
GAACTTTGGACCACCGGGAC+AGG | 0.464751 | 2.4:+76134366 | MS.gene072054:CDS |
CGAGGTTGATCTGAATGAAC+GGG | 0.468117 | 2.4:-76132668 | None:intergenic |
ACAGCAGAGCTTTGGACCAC+CGG | 0.470038 | 2.4:+76134207 | MS.gene072054:CDS |
GGAATCCCGATTGTTGTAAG+AGG | 0.470092 | 2.4:-76133879 | None:intergenic |
CAACAAAGATTTCCGCCTCC+TGG | 0.472277 | 2.4:+76134505 | MS.gene072054:CDS |
AGATTTCTCCCAAATTGTAC+TGG | 0.474613 | 2.4:-76133800 | None:intergenic |
AATTGTACTGGTGGAGGTCG+AGG | 0.477720 | 2.4:-76133788 | None:intergenic |
CGGCAGAACTTTGGGCCACC+GGG | 0.483926 | 2.4:+76134259 | MS.gene072054:CDS |
TTATGAAGAAACTTGTGCTA+AGG | 0.485239 | 2.4:+76132849 | MS.gene072054:CDS |
ACGGCAGAACTTTGGGCCAC+CGG | 0.489335 | 2.4:+76134258 | MS.gene072054:CDS |
TATGAAGAAACTTGTGCTAA+GGG | 0.489463 | 2.4:+76132850 | MS.gene072054:CDS |
ATGGTGTCAGGACCAATCTC+AGG | 0.489874 | 2.4:-76132736 | None:intergenic |
GGTGGAGGTTTGTTATCTCT+GGG | 0.493016 | 2.4:-76132808 | None:intergenic |
CCTTCGAAGAGGATGGTGTC+AGG | 0.493439 | 2.4:-76132748 | None:intergenic |
CTCCATACTGCTTGTTCACA+GGG | 0.493888 | 2.4:-76133532 | None:intergenic |
CCAGTAAAATTGCTAGGGCC+AGG | 0.494495 | 2.4:-76134523 | None:intergenic |
CCACCGGGACAGGGAGAAAG+AGG | 0.494921 | 2.4:+76134376 | MS.gene072054:CDS |
CGAAGTCGCAGTAGCTGAGA+AGG | 0.498879 | 2.4:-76132566 | None:intergenic |
CTCCCAAATTGTACTGGTGG+AGG | 0.499376 | 2.4:-76133794 | None:intergenic |
TCAGAACTCAGTCCTGAGAT+TGG | 0.500163 | 2.4:+76132724 | MS.gene072054:CDS |
AGGAGGCGGAAATCTTTGTT+GGG | 0.503310 | 2.4:-76134503 | None:intergenic |
ACAGCAGAACTTTGGACCAC+CGG | 0.505295 | 2.4:+76134360 | MS.gene072054:CDS |
ACAGGGTCAATGTAAGAATC+CGG | 0.508563 | 2.4:-76133515 | None:intergenic |
AAAATGTGATGAAATAGAAC+CGG | 0.509305 | 2.4:-76132605 | None:intergenic |
TCTCTCTTGTCTTCTCGCTA+CGG | 0.509897 | 2.4:+76132694 | MS.gene072054:CDS |
CTTCTTCTGTCTACTTCTCC+CGG | 0.510565 | 2.4:-76134277 | None:intergenic |
TGAGAAGGAGTGGTGGAGGC+CGG | 0.512480 | 2.4:-76132551 | None:intergenic |
AAGGTTGCGATTACAATCAC+TGG | 0.516564 | 2.4:+76132767 | MS.gene072054:CDS |
TATTCCAAACAGCAAACCTA+TGG | 0.521162 | 2.4:+76134160 | MS.gene072054:CDS |
GAGAATTAGCGACGATGCCA+TGG | 0.522594 | 2.4:-76132503 | None:intergenic |
GCTGCGATGCTGAATCAAAC+CGG | 0.524624 | 2.4:-76134018 | None:intergenic |
CTGTGCCTAGTGAAGGTGGA+TGG | 0.529404 | 2.4:+76134404 | MS.gene072054:CDS |
GTGATCTCAGGCTACGGCGG+AGG | 0.532432 | 2.4:-76132525 | None:intergenic |
GGTGGATACTGTGGCGAAGC+AGG | 0.533094 | 2.4:-76134184 | None:intergenic |
CCATAGTTTCTACCATCCCT+TGG | 0.533589 | 2.4:-76133905 | None:intergenic |
TGCAGTACAACTGTTTACAC+TGG | 0.536636 | 2.4:+76133014 | MS.gene072054:CDS |
ACCTCTCCAGTAAAATTGCT+AGG | 0.537861 | 2.4:-76134529 | None:intergenic |
AAACGAATCATTTCTTCAGG+TGG | 0.541590 | 2.4:-76132826 | None:intergenic |
TAGCTGAGAAGGAGTGGTGG+AGG | 0.542761 | 2.4:-76132555 | None:intergenic |
GAATCCCTCTTACAACAATC+GGG | 0.542891 | 2.4:+76133874 | MS.gene072054:CDS |
AGCTTTGGACCACCGGGAGA+AGG | 0.543753 | 2.4:+76134214 | MS.gene072054:CDS |
GGAATTTGAACAAGCCCAGA+AGG | 0.546452 | 2.4:+76134450 | MS.gene072054:CDS |
AAATCCCATCCACCTTCACT+AGG | 0.549954 | 2.4:-76134409 | None:intergenic |
TGATCATAGCTCTGCTGGGG+TGG | 0.551769 | 2.4:-76134046 | None:intergenic |
CTTCTTTCTCCTTGTCCTGG+CGG | 0.551794 | 2.4:-76134325 | None:intergenic |
CTGTGGCGAAGCAGGACCAT+AGG | 0.556513 | 2.4:-76134176 | None:intergenic |
GTGGAGGAATGTGTGATGCT+TGG | 0.556911 | 2.4:-76133964 | None:intergenic |
GGTCCAAAGCTCTGCTGTGG+TGG | 0.557931 | 2.4:-76134202 | None:intergenic |
TTTCTCCCAAATTGTACTGG+TGG | 0.558252 | 2.4:-76133797 | None:intergenic |
ACAGGAGATCAGTACATTGA+AGG | 0.559699 | 2.4:+76133755 | MS.gene072054:intron |
TCGAGGTTGATCTGAATGAA+CGG | 0.562081 | 2.4:-76132669 | None:intergenic |
AACGCCGTCGACGACGTTTG+GGG | 0.563351 | 2.4:-76132641 | None:intergenic |
GTTTCTACCATCCCTTGGCA+TGG | 0.563433 | 2.4:-76133900 | None:intergenic |
TGTGCCTAGTGAAGGTGGAT+GGG | 0.564317 | 2.4:+76134405 | MS.gene072054:CDS |
GGCAACACAAAGATAACTCC+GGG | 0.564421 | 2.4:-76133494 | None:intergenic |
CAGCAGAACTTTGGACCACC+GGG | 0.568755 | 2.4:+76134361 | MS.gene072054:CDS |
AACTCTGTGCCTAGTGAAGG+TGG | 0.569286 | 2.4:+76134400 | MS.gene072054:CDS |
CAGCAGAGCTTTGGACCACC+GGG | 0.574321 | 2.4:+76134208 | MS.gene072054:CDS |
CGGCAACACAAAGATAACTC+CGG | 0.575792 | 2.4:-76133495 | None:intergenic |
GGAGGCCGGAGAGTGATCTC+AGG | 0.580525 | 2.4:-76132537 | None:intergenic |
TCGCAGTAGCTGAGAAGGAG+TGG | 0.580953 | 2.4:-76132561 | None:intergenic |
CCTGACACCATCCTCTTCGA+AGG | 0.582398 | 2.4:+76132748 | MS.gene072054:CDS |
TAATCATGCTGAAGAACAGA+CGG | 0.584349 | 2.4:+76134477 | MS.gene072054:CDS |
GGAAACTCTGTGCCTAGTGA+AGG | 0.586295 | 2.4:+76134397 | MS.gene072054:CDS |
GAATCCCGATTGTTGTAAGA+GGG | 0.586300 | 2.4:-76133878 | None:intergenic |
AACTTTGGACCACCGGGACA+GGG | 0.587378 | 2.4:+76134367 | MS.gene072054:CDS |
CCTCTTTCTCCCTGTCCCGG+TGG | 0.592801 | 2.4:-76134376 | None:intergenic |
CCTCTCCAGTAAAATTGCTA+GGG | 0.592900 | 2.4:-76134528 | None:intergenic |
TAGGAGGAAGACGAGACTAT+CGG | 0.594936 | 2.4:+76133822 | MS.gene072054:CDS |
CGGGATTCCATGCCAAGGGA+TGG | 0.595865 | 2.4:+76133893 | MS.gene072054:CDS |
AGCTATGATCAAGCACCACA+AGG | 0.596634 | 2.4:+76134058 | MS.gene072054:CDS |
CTCTGCTGTGGTGGATACTG+TGG | 0.600550 | 2.4:-76134193 | None:intergenic |
CGGAGAGTGATCTCAGGCTA+CGG | 0.601292 | 2.4:-76132531 | None:intergenic |
TGGCCATAGTTCTGTTGAGG+TGG | 0.603738 | 2.4:-76133944 | None:intergenic |
GCTTGGCCATAGTTCTGTTG+AGG | 0.603846 | 2.4:-76133947 | None:intergenic |
ATTGTACTGGTGGAGGTCGA+GGG | 0.609778 | 2.4:-76133787 | None:intergenic |
AAATTGCTAGGGCCAGGAGG+CGG | 0.610340 | 2.4:-76134517 | None:intergenic |
ATCAATTGCCAAACAACCGA+GGG | 0.610471 | 2.4:+76133852 | MS.gene072054:CDS |
CTTCTTTCTCCTTCTCCCGG+TGG | 0.610979 | 2.4:-76134223 | None:intergenic |
TGTTGTAAGAGGGATTCCCT+CGG | 0.611597 | 2.4:-76133868 | None:intergenic |
AATCATGCTGAAGAACAGAC+GGG | 0.612561 | 2.4:+76134478 | MS.gene072054:CDS |
AAATCCCCAAACGTCGTCGA+CGG | 0.615141 | 2.4:+76132637 | MS.gene072054:CDS |
ATCGCAACCTTCGAAGAGGA+TGG | 0.615614 | 2.4:-76132755 | None:intergenic |
CAGTAGCTGAGAAGGAGTGG+TGG | 0.617757 | 2.4:-76132558 | None:intergenic |
GGTGGTCCAAAGTTCTGCTG+TGG | 0.619499 | 2.4:-76134358 | None:intergenic |
GGTGGCCCAAAGTTCTGCCG+TGG | 0.626931 | 2.4:-76134256 | None:intergenic |
GGTGGTCCAAAGCTCTGCTG+TGG | 0.627905 | 2.4:-76134205 | None:intergenic |
GAATTTGAACAAGCCCAGAA+GGG | 0.628457 | 2.4:+76134451 | MS.gene072054:CDS |
AGAAGACAAGAGAGAAATCG+AGG | 0.630277 | 2.4:-76132686 | None:intergenic |
TTTCAAACCATCATATATGG+AGG | 0.632324 | 2.4:+76134429 | MS.gene072054:CDS |
ATTCCTCCACAACAAAACAT+TGG | 0.633304 | 2.4:+76133977 | MS.gene072054:CDS |
CAATCGGGATTCCATGCCAA+GGG | 0.634508 | 2.4:+76133889 | MS.gene072054:CDS |
AATTTGAACAAGCCCAGAAG+GGG | 0.637787 | 2.4:+76134452 | MS.gene072054:CDS |
ACAATCGGGATTCCATGCCA+AGG | 0.637883 | 2.4:+76133888 | MS.gene072054:CDS |
AAAGAAGAAATTATGCGCCA+CGG | 0.637957 | 2.4:+76134239 | MS.gene072054:CDS |
AATCAATTGCCAAACAACCG+AGG | 0.644295 | 2.4:+76133851 | MS.gene072054:CDS |
CGCTTGATTGAAGTTCTGCG+AGG | 0.644978 | 2.4:-76134128 | None:intergenic |
GCTTGATCATAGCTCTGCTG+GGG | 0.651267 | 2.4:-76134049 | None:intergenic |
TGTAATCGCAACCTTCGAAG+AGG | 0.655228 | 2.4:-76132759 | None:intergenic |
TGTTTGGGTGGATACCCTTG+TGG | 0.664703 | 2.4:-76134073 | None:intergenic |
GTAAAATTGCTAGGGCCAGG+AGG | 0.666157 | 2.4:-76134520 | None:intergenic |
CCTGTGAACAAGCAGTATGG+AGG | 0.671051 | 2.4:+76133533 | MS.gene072054:CDS |
GCTATGATCAAGCACCACAA+GGG | 0.671691 | 2.4:+76134059 | MS.gene072054:CDS |
CGTAGCCTGAGATCACTCTC+CGG | 0.691705 | 2.4:+76132532 | MS.gene072054:CDS |
CTTCTGTCTACTTCTCCCGG+TGG | 0.703848 | 2.4:-76134274 | None:intergenic |
AGAGTGATCTCAGGCTACGG+CGG | 0.711287 | 2.4:-76132528 | None:intergenic |
CAATTTGGGAGAAATCTAGG+AGG | 0.741053 | 2.4:+76133806 | MS.gene072054:CDS |
ATCATGCTGAAGAACAGACG+GGG | 0.746376 | 2.4:+76134479 | MS.gene072054:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTAGAAAGATTAATATTA+TGG | + | chr2.4:76132924-76132943 | MS.gene072054:intron | 10.0% |
!! | TAACAAAAAAAAAATTGCAA+AGG | + | chr2.4:76134597-76134616 | MS.gene072054:intron | 15.0% |
!!! | TTATACAATGTATCATTTTT+TGG | - | chr2.4:76133370-76133389 | None:intergenic | 15.0% |
!!! | AATGCAAGCTATTTTATTTA+TGG | + | chr2.4:76133631-76133650 | MS.gene072054:intron | 20.0% |
!!! | TGTTTTTGTTATTTTATGCA+GGG | + | chr2.4:76134704-76134723 | MS.gene072054:intron | 20.0% |
!!! | TTGTTTTTGTTATTTTATGC+AGG | + | chr2.4:76134703-76134722 | MS.gene072054:intron | 20.0% |
! | AAAATGTGATGAAATAGAAC+CGG | - | chr2.4:76132608-76132627 | None:intergenic | 25.0% |
! | AAATAGGTCAATGAAATCTA+AGG | - | chr2.4:76133421-76133440 | None:intergenic | 25.0% |
! | AATAGGTCAATGAAATCTAA+GGG | - | chr2.4:76133420-76133439 | None:intergenic | 25.0% |
! | ACAAATACCTTCAAATTTCT+TGG | - | chr2.4:76133069-76133088 | None:intergenic | 25.0% |
! | ATTTATTTGAGAGCAACTTT+CGG | + | chr2.4:76133724-76133743 | MS.gene072054:intron | 25.0% |
! | CAATGAAATCTAATCTAAGT+CGG | - | chr2.4:76133100-76133119 | None:intergenic | 25.0% |
! | CTTTCTAATCTATAACAAAC+AGG | - | chr2.4:76133140-76133159 | None:intergenic | 25.0% |
! | TAAAAACGAATCATTTCTTC+AGG | - | chr2.4:76132832-76132851 | None:intergenic | 25.0% |
! | TCTATTGTCTCAACTAAAAT+AGG | - | chr2.4:76133437-76133456 | None:intergenic | 25.0% |
!! | GAGACAATAGAAAATGATTT+TGG | + | chr2.4:76133446-76133465 | MS.gene072054:intron | 25.0% |
!!! | TGATTTTTTTAGTGTTGAAG+AGG | + | chr2.4:76132971-76132990 | MS.gene072054:intron | 25.0% |
ATGAAATAGAACCGGTAATT+GGG | - | chr2.4:76132600-76132619 | None:intergenic | 30.0% | |
ATTCTTAAAGAAGCCACAAA+TGG | + | chr2.4:76133393-76133412 | MS.gene072054:intron | 30.0% | |
GGATTTCAAACCATCATATA+TGG | + | chr2.4:76134426-76134445 | MS.gene072054:CDS | 30.0% | |
TACACATGATTCGTAAAACA+AGG | - | chr2.4:76134634-76134653 | None:intergenic | 30.0% | |
TATGAAGAAACTTGTGCTAA+GGG | + | chr2.4:76132850-76132869 | MS.gene072054:CDS | 30.0% | |
TCAAATTCCTCCATATATGA+TGG | - | chr2.4:76134439-76134458 | None:intergenic | 30.0% | |
TTATGAAGAAACTTGTGCTA+AGG | + | chr2.4:76132849-76132868 | MS.gene072054:CDS | 30.0% | |
TTCTTAAAGAAGCCACAAAT+GGG | + | chr2.4:76133394-76133413 | MS.gene072054:intron | 30.0% | |
TTTCAAACCATCATATATGG+AGG | + | chr2.4:76134429-76134448 | MS.gene072054:CDS | 30.0% | |
! | AGAGGTATGATAGAATAGAA+TGG | + | chr2.4:76134546-76134565 | MS.gene072054:intron | 30.0% |
! | TCATTGACCTTGTTTGTTTA+TGG | + | chr2.4:76133114-76133133 | MS.gene072054:intron | 30.0% |
AAACAGGCCATAAACAAACA+AGG | - | chr2.4:76133124-76133143 | None:intergenic | 35.0% | |
AAACGAATCATTTCTTCAGG+TGG | - | chr2.4:76132829-76132848 | None:intergenic | 35.0% | |
AAAGAAGAAATTATGCGCCA+CGG | + | chr2.4:76134239-76134258 | MS.gene072054:CDS | 35.0% | |
AGATTTCTCCCAAATTGTAC+TGG | - | chr2.4:76133803-76133822 | None:intergenic | 35.0% | |
ATTCCTCCACAACAAAACAT+TGG | + | chr2.4:76133977-76133996 | MS.gene072054:CDS | 35.0% | |
CGAATCATGTGTACTGTAAA+TGG | + | chr2.4:76134641-76134660 | MS.gene072054:intron | 35.0% | |
GAAGAGTCCAAGAAATTTGA+AGG | + | chr2.4:76133059-76133078 | MS.gene072054:CDS | 35.0% | |
GATGAAATAGAACCGGTAAT+TGG | - | chr2.4:76132601-76132620 | None:intergenic | 35.0% | |
GTACAATTTGGGAGAAATCT+AGG | + | chr2.4:76133803-76133822 | MS.gene072054:CDS | 35.0% | |
TAATCATGCTGAAGAACAGA+CGG | + | chr2.4:76134477-76134496 | MS.gene072054:CDS | 35.0% | |
TATCCACCCAAACAAAACTA+TGG | + | chr2.4:76134082-76134101 | MS.gene072054:CDS | 35.0% | |
TATTCCAAACAGCAAACCTA+TGG | + | chr2.4:76134160-76134179 | MS.gene072054:CDS | 35.0% | |
! | TGTTGAGGTGGAAAATTTTG+TGG | - | chr2.4:76133935-76133954 | None:intergenic | 35.0% |
!! | TGCTGTTTGGAATAGTTTTG+TGG | - | chr2.4:76134154-76134173 | None:intergenic | 35.0% |
!!! | AGCTTGACCATAGTTTTGTT+TGG | - | chr2.4:76134092-76134111 | None:intergenic | 35.0% |
!!! | GCTTGACCATAGTTTTGTTT+GGG | - | chr2.4:76134091-76134110 | None:intergenic | 35.0% |
AAGGTTGCGATTACAATCAC+TGG | + | chr2.4:76132767-76132786 | MS.gene072054:CDS | 40.0% | |
AATCAATTGCCAAACAACCG+AGG | + | chr2.4:76133851-76133870 | MS.gene072054:CDS | 40.0% | |
AATCATGCTGAAGAACAGAC+GGG | + | chr2.4:76134478-76134497 | MS.gene072054:CDS | 40.0% | |
AATTTGAACAAGCCCAGAAG+GGG | + | chr2.4:76134452-76134471 | MS.gene072054:CDS | 40.0% | |
ACAGGAGATCAGTACATTGA+AGG | + | chr2.4:76133755-76133774 | MS.gene072054:intron | 40.0% | |
ACAGGGTCAATGTAAGAATC+CGG | - | chr2.4:76133518-76133537 | None:intergenic | 40.0% | |
ACCGGATATTTGGTTGTTGT+TGG | - | chr2.4:76134003-76134022 | None:intergenic | 40.0% | |
ACCTCTCCAGTAAAATTGCT+AGG | - | chr2.4:76134532-76134551 | None:intergenic | 40.0% | |
AGAAGACAAGAGAGAAATCG+AGG | - | chr2.4:76132689-76132708 | None:intergenic | 40.0% | |
AGCATGATTATTCCCCTTCT+GGG | - | chr2.4:76134467-76134486 | None:intergenic | 40.0% | |
ATCAATTGCCAAACAACCGA+GGG | + | chr2.4:76133852-76133871 | MS.gene072054:CDS | 40.0% | |
CAATTTGGGAGAAATCTAGG+AGG | + | chr2.4:76133806-76133825 | MS.gene072054:CDS | 40.0% | |
CCTCTCCAGTAAAATTGCTA+GGG | - | chr2.4:76134531-76134550 | None:intergenic | 40.0% | |
GAATCCCGATTGTTGTAAGA+GGG | - | chr2.4:76133881-76133900 | None:intergenic | 40.0% | |
GAATCCCTCTTACAACAATC+GGG | + | chr2.4:76133874-76133893 | MS.gene072054:CDS | 40.0% | |
GAATTTGAACAAGCCCAGAA+GGG | + | chr2.4:76134451-76134470 | MS.gene072054:CDS | 40.0% | |
GCCAACAACAACCAAATATC+CGG | + | chr2.4:76133999-76134018 | MS.gene072054:CDS | 40.0% | |
GCTGAATCAAACCGGATATT+TGG | - | chr2.4:76134013-76134032 | None:intergenic | 40.0% | |
GGAATCCCTCTTACAACAAT+CGG | + | chr2.4:76133873-76133892 | MS.gene072054:CDS | 40.0% | |
GTGCTAAGGGTTTCAATATC+AGG | + | chr2.4:76132863-76132882 | MS.gene072054:CDS | 40.0% | |
TGCAGTACAACTGTTTACAC+TGG | + | chr2.4:76133014-76133033 | MS.gene072054:CDS | 40.0% | |
TTTCCACCTCAACAGAACTA+TGG | + | chr2.4:76133941-76133960 | MS.gene072054:CDS | 40.0% | |
TTTCTCCCAAATTGTACTGG+TGG | - | chr2.4:76133800-76133819 | None:intergenic | 40.0% | |
TTTCTTCTTTCTCCTTCTCC+CGG | - | chr2.4:76134229-76134248 | None:intergenic | 40.0% | |
TTTCTTCTTTCTCCTTGTCC+TGG | - | chr2.4:76134331-76134350 | None:intergenic | 40.0% | |
! | TCGAGGTTGATCTGAATGAA+CGG | - | chr2.4:76132672-76132691 | None:intergenic | 40.0% |
! | TGAGGTGGAAAATTTTGTGG+AGG | - | chr2.4:76133932-76133951 | None:intergenic | 40.0% |
! | TGCGAGGCTGAATAATTTTG+TGG | - | chr2.4:76134115-76134134 | None:intergenic | 40.0% |
!! | TGTTGGCCAATGTTTTGTTG+TGG | - | chr2.4:76133986-76134005 | None:intergenic | 40.0% |
!!! | TGACCATAGTTTTGTTTGGG+TGG | - | chr2.4:76134088-76134107 | None:intergenic | 40.0% |
AAATCCCATCCACCTTCACT+AGG | - | chr2.4:76134412-76134431 | None:intergenic | 45.0% | |
AGCTATGATCAAGCACCACA+AGG | + | chr2.4:76134058-76134077 | MS.gene072054:CDS | 45.0% | |
AGGAGGCGGAAATCTTTGTT+GGG | - | chr2.4:76134506-76134525 | None:intergenic | 45.0% | |
ATCATGCTGAAGAACAGACG+GGG | + | chr2.4:76134479-76134498 | MS.gene072054:CDS | 45.0% | |
ATTTATCGTCTCTCGCGTTC+TGG | + | chr2.4:76133574-76133593 | MS.gene072054:intron | 45.0% | |
CAGCATGATTATTCCCCTTC+TGG | - | chr2.4:76134468-76134487 | None:intergenic | 45.0% | |
CCAAGGGATGGTAGAAACTA+TGG | + | chr2.4:76133905-76133924 | MS.gene072054:CDS | 45.0% | |
CCATAGTTTCTACCATCCCT+TGG | - | chr2.4:76133908-76133927 | None:intergenic | 45.0% | |
CGAATCATTTCTTCAGGTGG+AGG | - | chr2.4:76132826-76132845 | None:intergenic | 45.0% | |
CGGAGTTATCTTTGTGTTGC+CGG | + | chr2.4:76133496-76133515 | MS.gene072054:CDS | 45.0% | |
CGGCAACACAAAGATAACTC+CGG | - | chr2.4:76133498-76133517 | None:intergenic | 45.0% | |
CTCCATACTGCTTGTTCACA+GGG | - | chr2.4:76133535-76133554 | None:intergenic | 45.0% | |
CTTCTTCTGTCTACTTCTCC+CGG | - | chr2.4:76134280-76134299 | None:intergenic | 45.0% | |
GAAATCTAAGGGCCCATTTG+TGG | - | chr2.4:76133409-76133428 | None:intergenic | 45.0% | |
GACCTCCACCAGTACAATTT+GGG | + | chr2.4:76133792-76133811 | MS.gene072054:CDS | 45.0% | |
GCTATGATCAAGCACCACAA+GGG | + | chr2.4:76134059-76134078 | MS.gene072054:CDS | 45.0% | |
GGAATCCCGATTGTTGTAAG+AGG | - | chr2.4:76133882-76133901 | None:intergenic | 45.0% | |
GGAATTTGAACAAGCCCAGA+AGG | + | chr2.4:76134450-76134469 | MS.gene072054:CDS | 45.0% | |
GGCAACACAAAGATAACTCC+GGG | - | chr2.4:76133497-76133516 | None:intergenic | 45.0% | |
TAGGAGGAAGACGAGACTAT+CGG | + | chr2.4:76133822-76133841 | MS.gene072054:CDS | 45.0% | |
TCAGAACTCAGTCCTGAGAT+TGG | + | chr2.4:76132724-76132743 | MS.gene072054:CDS | 45.0% | |
TCTCTCTTGTCTTCTCGCTA+CGG | + | chr2.4:76132694-76132713 | MS.gene072054:CDS | 45.0% | |
TGTAATCGCAACCTTCGAAG+AGG | - | chr2.4:76132762-76132781 | None:intergenic | 45.0% | |
TGTTGTAAGAGGGATTCCCT+CGG | - | chr2.4:76133871-76133890 | None:intergenic | 45.0% | |
! | CAACTTTCGGTGTGTGATAC+AGG | + | chr2.4:76133737-76133756 | MS.gene072054:intron | 45.0% |
! | CCCTAGCAATTTTACTGGAG+AGG | + | chr2.4:76134528-76134547 | MS.gene072054:CDS | 45.0% |
! | CGAGGTTGATCTGAATGAAC+GGG | - | chr2.4:76132671-76132690 | None:intergenic | 45.0% |
! | GGATTGTTGTGCTTTTCGAC+AGG | + | chr2.4:76133467-76133486 | MS.gene072054:intron | 45.0% |
! | TATGCGCCGCAGCAAAATTT+TGG | + | chr2.4:76134301-76134320 | MS.gene072054:CDS | 45.0% |
! | TGCTTGATCATAGCTCTGCT+GGG | - | chr2.4:76134053-76134072 | None:intergenic | 45.0% |
!! | AGGACCATAGGTTTGCTGTT+TGG | - | chr2.4:76134167-76134186 | None:intergenic | 45.0% |
!! | AGGTGGAGGTTTGTTATCTC+TGG | - | chr2.4:76132812-76132831 | None:intergenic | 45.0% |
!! | GGTGGAGGTTTGTTATCTCT+GGG | - | chr2.4:76132811-76132830 | None:intergenic | 45.0% |
!! | TGGCCAATGTTTTGTTGTGG+AGG | - | chr2.4:76133983-76134002 | None:intergenic | 45.0% |
!!! | ATAAATTAAAAAAGTAATTT+TGG | + | chr2.4:76133253-76133272 | MS.gene072054:intron | 5.0% |
AAATCCCCAAACGTCGTCGA+CGG | + | chr2.4:76132637-76132656 | MS.gene072054:CDS | 50.0% | |
AACTCTGTGCCTAGTGAAGG+TGG | + | chr2.4:76134400-76134419 | MS.gene072054:CDS | 50.0% | |
ACAATCGGGATTCCATGCCA+AGG | + | chr2.4:76133888-76133907 | MS.gene072054:CDS | 50.0% | |
ACAGCAGAACTTTGGACCAC+CGG | + | chr2.4:76134360-76134379 | MS.gene072054:CDS | 50.0% | |
AGCTACTGCGACTTCGCTTT+CGG | + | chr2.4:76132573-76132592 | MS.gene072054:CDS | 50.0% | |
ATCGCAACCTTCGAAGAGGA+TGG | - | chr2.4:76132758-76132777 | None:intergenic | 50.0% | |
CAACAAAGATTTCCGCCTCC+TGG | + | chr2.4:76134505-76134524 | MS.gene072054:CDS | 50.0% | |
CAATCGGGATTCCATGCCAA+GGG | + | chr2.4:76133889-76133908 | MS.gene072054:CDS | 50.0% | |
CAGGAGGCGGAAATCTTTGT+TGG | - | chr2.4:76134507-76134526 | None:intergenic | 50.0% | |
CCAGTAAAATTGCTAGGGCC+AGG | - | chr2.4:76134526-76134545 | None:intergenic | 50.0% | |
CCTCCATACTGCTTGTTCAC+AGG | - | chr2.4:76133536-76133555 | None:intergenic | 50.0% | |
CCTGTGAACAAGCAGTATGG+AGG | + | chr2.4:76133533-76133552 | MS.gene072054:CDS | 50.0% | |
CGACCTCCACCAGTACAATT+TGG | + | chr2.4:76133791-76133810 | MS.gene072054:CDS | 50.0% | |
CGCTTGATTGAAGTTCTGCG+AGG | - | chr2.4:76134131-76134150 | None:intergenic | 50.0% | |
CTTCTTTCTCCTTGTCCTGG+CGG | - | chr2.4:76134328-76134347 | None:intergenic | 50.0% | |
GACCCTGTGAACAAGCAGTA+TGG | + | chr2.4:76133530-76133549 | MS.gene072054:CDS | 50.0% | |
GCTGCGATGCTGAATCAAAC+CGG | - | chr2.4:76134021-76134040 | None:intergenic | 50.0% | |
GGAAACTCTGTGCCTAGTGA+AGG | + | chr2.4:76134397-76134416 | MS.gene072054:CDS | 50.0% | |
GTAAAATTGCTAGGGCCAGG+AGG | - | chr2.4:76134523-76134542 | None:intergenic | 50.0% | |
GTGGAGGAATGTGTGATGCT+TGG | - | chr2.4:76133967-76133986 | None:intergenic | 50.0% | |
GTTTCTACCATCCCTTGGCA+TGG | - | chr2.4:76133903-76133922 | None:intergenic | 50.0% | |
TATCCACCACAGCAGAGCTT+TGG | + | chr2.4:76134199-76134218 | MS.gene072054:CDS | 50.0% | |
TATGCGCCACAGCAGAACTT+TGG | + | chr2.4:76134352-76134371 | MS.gene072054:CDS | 50.0% | |
TCGCTTTCGGTCCCAATTAC+CGG | + | chr2.4:76132586-76132605 | MS.gene072054:CDS | 50.0% | |
TGTGCCTAGTGAAGGTGGAT+GGG | + | chr2.4:76134405-76134424 | MS.gene072054:CDS | 50.0% | |
TGTTTGGGTGGATACCCTTG+TGG | - | chr2.4:76134076-76134095 | None:intergenic | 50.0% | |
TTCTTTCTCCTTGTCCTGGC+GGG | - | chr2.4:76134327-76134346 | None:intergenic | 50.0% | |
TTTCCTCTTTCTCCCTGTCC+CGG | - | chr2.4:76134382-76134401 | None:intergenic | 50.0% | |
! | AATTGTACTGGTGGAGGTCG+AGG | - | chr2.4:76133791-76133810 | None:intergenic | 50.0% |
! | ATGGTGTCAGGACCAATCTC+AGG | - | chr2.4:76132739-76132758 | None:intergenic | 50.0% |
! | ATTGTACTGGTGGAGGTCGA+GGG | - | chr2.4:76133790-76133809 | None:intergenic | 50.0% |
! | CCTGGCCCTAGCAATTTTAC+TGG | + | chr2.4:76134523-76134542 | MS.gene072054:CDS | 50.0% |
! | CTCCCAAATTGTACTGGTGG+AGG | - | chr2.4:76133797-76133816 | None:intergenic | 50.0% |
! | GCTTGATCATAGCTCTGCTG+GGG | - | chr2.4:76134052-76134071 | None:intergenic | 50.0% |
! | GCTTGGCCATAGTTCTGTTG+AGG | - | chr2.4:76133950-76133969 | None:intergenic | 50.0% |
! | GTGCTTGATCATAGCTCTGC+TGG | - | chr2.4:76134054-76134073 | None:intergenic | 50.0% |
! | TGCTTTTCGACAGGTTTGCC+CGG | + | chr2.4:76133476-76133495 | MS.gene072054:intron | 50.0% |
! | TGGCCATAGTTCTGTTGAGG+TGG | - | chr2.4:76133947-76133966 | None:intergenic | 50.0% |
AAATTGCTAGGGCCAGGAGG+CGG | - | chr2.4:76134520-76134539 | None:intergenic | 55.0% | |
AACTTTGGACCACCGGGACA+GGG | + | chr2.4:76134367-76134386 | MS.gene072054:CDS | 55.0% | |
AGAGTGATCTCAGGCTACGG+CGG | - | chr2.4:76132531-76132550 | None:intergenic | 55.0% | |
ATGCGCCACGGCAGAACTTT+GGG | + | chr2.4:76134251-76134270 | MS.gene072054:CDS | 55.0% | |
CAGCAGAACTTTGGACCACC+GGG | + | chr2.4:76134361-76134380 | MS.gene072054:CDS | 55.0% | |
CAGTAGCTGAGAAGGAGTGG+TGG | - | chr2.4:76132561-76132580 | None:intergenic | 55.0% | |
CCTGACACCATCCTCTTCGA+AGG | + | chr2.4:76132748-76132767 | MS.gene072054:CDS | 55.0% | |
CCTTCGAAGAGGATGGTGTC+AGG | - | chr2.4:76132751-76132770 | None:intergenic | 55.0% | |
CGAAGTCGCAGTAGCTGAGA+AGG | - | chr2.4:76132569-76132588 | None:intergenic | 55.0% | |
CGGAGAGTGATCTCAGGCTA+CGG | - | chr2.4:76132534-76132553 | None:intergenic | 55.0% | |
CGTAGCCTGAGATCACTCTC+CGG | + | chr2.4:76132532-76132551 | MS.gene072054:CDS | 55.0% | |
CTGTGCCTAGTGAAGGTGGA+TGG | + | chr2.4:76134404-76134423 | MS.gene072054:CDS | 55.0% | |
CTTCTGTCTACTTCTCCCGG+TGG | - | chr2.4:76134277-76134296 | None:intergenic | 55.0% | |
CTTCTTTCTCCTTCTCCCGG+TGG | - | chr2.4:76134226-76134245 | None:intergenic | 55.0% | |
GAGGGATTCCCTCGGTTGTT+TGG | - | chr2.4:76133863-76133882 | None:intergenic | 55.0% | |
GGTGGTCCAAAGTTCTGCTG+TGG | - | chr2.4:76134361-76134380 | None:intergenic | 55.0% | |
TAGCTGAGAAGGAGTGGTGG+AGG | - | chr2.4:76132558-76132577 | None:intergenic | 55.0% | |
TATGCGCCACGGCAGAACTT+TGG | + | chr2.4:76134250-76134269 | MS.gene072054:CDS | 55.0% | |
TCGCAGTAGCTGAGAAGGAG+TGG | - | chr2.4:76132564-76132583 | None:intergenic | 55.0% | |
! | GGCGGGCCAAAATTTTGCTG+CGG | - | chr2.4:76134310-76134329 | None:intergenic | 55.0% |
! | TGATCATAGCTCTGCTGGGG+TGG | - | chr2.4:76134049-76134068 | None:intergenic | 55.0% |
!! | AATTTTGGCCCGCCAGGACA+AGG | + | chr2.4:76134316-76134335 | MS.gene072054:CDS | 55.0% |
!! | ACAGCAGAGCTTTGGACCAC+CGG | + | chr2.4:76134207-76134226 | MS.gene072054:CDS | 55.0% |
!! | CAGCAAAATTTTGGCCCGCC+AGG | + | chr2.4:76134310-76134329 | MS.gene072054:CDS | 55.0% |
!! | CTCTGCTGTGGTGGATACTG+TGG | - | chr2.4:76134196-76134215 | None:intergenic | 55.0% |
AACGCCGTCGACGACGTTTG+GGG | - | chr2.4:76132644-76132663 | None:intergenic | 60.0% | |
ACGGCAGAACTTTGGGCCAC+CGG | + | chr2.4:76134258-76134277 | MS.gene072054:CDS | 60.0% | |
CGGGATTCCATGCCAAGGGA+TGG | + | chr2.4:76133893-76133912 | MS.gene072054:CDS | 60.0% | |
CTGTGGCGAAGCAGGACCAT+AGG | - | chr2.4:76134179-76134198 | None:intergenic | 60.0% | |
GAACGCCGTCGACGACGTTT+GGG | - | chr2.4:76132645-76132664 | None:intergenic | 60.0% | |
GAACTTTGGACCACCGGGAC+AGG | + | chr2.4:76134366-76134385 | MS.gene072054:CDS | 60.0% | |
GGTCCAAAGCTCTGCTGTGG+TGG | - | chr2.4:76134205-76134224 | None:intergenic | 60.0% | |
GGTGGATACTGTGGCGAAGC+AGG | - | chr2.4:76134187-76134206 | None:intergenic | 60.0% | |
GGTGGTCCAAAGCTCTGCTG+TGG | - | chr2.4:76134208-76134227 | None:intergenic | 60.0% | |
TGAACGCCGTCGACGACGTT+TGG | - | chr2.4:76132646-76132665 | None:intergenic | 60.0% | |
! | TGAGAAGGAGTGGTGGAGGC+CGG | - | chr2.4:76132554-76132573 | None:intergenic | 60.0% |
!! | AGCTTTGGACCACCGGGAGA+AGG | + | chr2.4:76134214-76134233 | MS.gene072054:CDS | 60.0% |
!! | CAGCAGAGCTTTGGACCACC+GGG | + | chr2.4:76134208-76134227 | MS.gene072054:CDS | 60.0% |
CCACCGGGACAGGGAGAAAG+AGG | + | chr2.4:76134376-76134395 | MS.gene072054:CDS | 65.0% | |
CCTCTTTCTCCCTGTCCCGG+TGG | - | chr2.4:76134379-76134398 | None:intergenic | 65.0% | |
CGGCAGAACTTTGGGCCACC+GGG | + | chr2.4:76134259-76134278 | MS.gene072054:CDS | 65.0% | |
GGAGGCCGGAGAGTGATCTC+AGG | - | chr2.4:76132540-76132559 | None:intergenic | 65.0% | |
GGTGGCCCAAAGTTCTGCCG+TGG | - | chr2.4:76134259-76134278 | None:intergenic | 65.0% | |
GTGATCTCAGGCTACGGCGG+AGG | - | chr2.4:76132528-76132547 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 76132505 | 76134736 | 76132505 | ID=MS.gene072054 |
chr2.4 | mRNA | 76132505 | 76134736 | 76132505 | ID=MS.gene072054.t1;Parent=MS.gene072054 |
chr2.4 | exon | 76132505 | 76132884 | 76132505 | ID=MS.gene072054.t1.exon1;Parent=MS.gene072054.t1 |
chr2.4 | CDS | 76132505 | 76132884 | 76132505 | ID=cds.MS.gene072054.t1;Parent=MS.gene072054.t1 |
chr2.4 | exon | 76132983 | 76133080 | 76132983 | ID=MS.gene072054.t1.exon2;Parent=MS.gene072054.t1 |
chr2.4 | CDS | 76132983 | 76133080 | 76132983 | ID=cds.MS.gene072054.t1;Parent=MS.gene072054.t1 |
chr2.4 | exon | 76133489 | 76133554 | 76133489 | ID=MS.gene072054.t1.exon3;Parent=MS.gene072054.t1 |
chr2.4 | CDS | 76133489 | 76133554 | 76133489 | ID=cds.MS.gene072054.t1;Parent=MS.gene072054.t1 |
chr2.4 | exon | 76133759 | 76134549 | 76133759 | ID=MS.gene072054.t1.exon4;Parent=MS.gene072054.t1 |
chr2.4 | CDS | 76133759 | 76134549 | 76133759 | ID=cds.MS.gene072054.t1;Parent=MS.gene072054.t1 |
chr2.4 | exon | 76134725 | 76134736 | 76134725 | ID=MS.gene072054.t1.exon5;Parent=MS.gene072054.t1 |
chr2.4 | CDS | 76134725 | 76134736 | 76134725 | ID=cds.MS.gene072054.t1;Parent=MS.gene072054.t1 |
Gene Sequence |
Protein sequence |