Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072291.t1 | XP_013444158.1 | 97.2 | 217 | 6 | 0 | 1 | 217 | 37 | 253 | 5.20E-115 | 423.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072291.t1 | Q8GYN5 | 34.2 | 219 | 92 | 6 | 1 | 217 | 37 | 205 | 3.0e-18 | 93.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072291.t1 | A0A072TXB9 | 97.2 | 217 | 6 | 0 | 1 | 217 | 37 | 253 | 3.8e-115 | 423.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049148 | MS.gene072291 | 0.813762 | 2.17E-51 | -1.69E-46 |
| MS.gene050173 | MS.gene072291 | 0.810723 | 1.00E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene072291 | 0.808193 | 3.49E-50 | -1.69E-46 |
| MS.gene05884 | MS.gene072291 | 0.825331 | 4.97E-54 | -1.69E-46 |
| MS.gene059800 | MS.gene072291 | 0.803392 | 3.56E-49 | -1.69E-46 |
| MS.gene059943 | MS.gene072291 | 0.818184 | 2.24E-52 | -1.69E-46 |
| MS.gene06012 | MS.gene072291 | 0.803109 | 4.08E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072291.t1 | MTR_8g012960 | 97.235 | 217 | 6 | 0 | 1 | 217 | 37 | 253 | 3.33e-153 | 426 |
| MS.gene072291.t1 | MTR_7g056147 | 66.063 | 221 | 54 | 7 | 1 | 217 | 1 | 204 | 3.83e-84 | 249 |
| MS.gene072291.t1 | MTR_7g056147 | 66.063 | 221 | 54 | 7 | 1 | 217 | 38 | 241 | 1.08e-83 | 249 |
| MS.gene072291.t1 | MTR_7g056147 | 66.063 | 221 | 54 | 7 | 1 | 217 | 39 | 242 | 1.65e-83 | 248 |
| MS.gene072291.t1 | MTR_5g096030 | 48.485 | 66 | 31 | 2 | 155 | 217 | 2 | 67 | 9.26e-13 | 62.0 |
| MS.gene072291.t1 | MTR_4g104085 | 50.000 | 54 | 27 | 0 | 155 | 208 | 19 | 72 | 2.29e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072291.t1 | AT3G25070 | 35.294 | 221 | 87 | 8 | 1 | 217 | 37 | 205 | 1.10e-21 | 89.4 |
| MS.gene072291.t1 | AT3G25070 | 37.755 | 196 | 66 | 8 | 1 | 192 | 50 | 193 | 1.35e-21 | 89.4 |
| MS.gene072291.t1 | AT5G55850 | 55.319 | 47 | 19 | 1 | 155 | 201 | 3 | 47 | 2.70e-11 | 58.2 |
| MS.gene072291.t1 | AT5G55850 | 55.319 | 47 | 19 | 1 | 155 | 201 | 3 | 47 | 2.87e-11 | 58.9 |
| MS.gene072291.t1 | AT5G55850 | 55.319 | 47 | 19 | 1 | 155 | 201 | 19 | 63 | 7.79e-11 | 58.2 |
Find 76 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAACAGCTGCACCTTTATC+AGG | 0.262008 | 8.3:-75393456 | None:intergenic |
| CTCTGAATTGGCTCTGGGTT+TGG | 0.278752 | 8.3:-75392935 | None:intergenic |
| CCTGAGCTTTGTCATTAGTT+TGG | 0.314715 | 8.3:-75393620 | None:intergenic |
| CCAGCAGTACTTTGTCTTGA+AGG | 0.363594 | 8.3:-75393129 | None:intergenic |
| GGTGCAGCTGTTCCAAAGTT+TGG | 0.378951 | 8.3:+75393465 | MS.gene072291:CDS |
| GAGGAGAGACAGGGTGGGGC+CGG | 0.380564 | 8.3:+75393552 | MS.gene072291:CDS |
| AGATTTGCAATATGTTAAAC+AGG | 0.383444 | 8.3:-75393651 | None:intergenic |
| ATAACATGCGGCCTCTCATT+AGG | 0.384811 | 8.3:-75393591 | None:intergenic |
| GCCAATTCAGAGGATCTATC+TGG | 0.386827 | 8.3:+75392946 | MS.gene072291:CDS |
| ATTGGCTCTGGGTTTGGTAT+TGG | 0.387368 | 8.3:-75392929 | None:intergenic |
| CGGCCTCTCATTAGGTGTGC+CGG | 0.392536 | 8.3:-75393583 | None:intergenic |
| TCCAGATAGATCCTCTGAAT+TGG | 0.407045 | 8.3:-75392947 | None:intergenic |
| TGTACCATGGCTGCTGTCAT+AGG | 0.408751 | 8.3:-75393244 | None:intergenic |
| AGGTGTGCCGGGTGCATGTC+CGG | 0.413031 | 8.3:-75393571 | None:intergenic |
| CAAAGTAAGAGAGGAGAGAC+AGG | 0.416279 | 8.3:+75393542 | MS.gene072291:CDS |
| TGTTCCAAAGTTTGGTGATT+GGG | 0.423365 | 8.3:+75393473 | MS.gene072291:CDS |
| TAGATCCTCTGAATTGGCTC+TGG | 0.423435 | 8.3:-75392941 | None:intergenic |
| CTGTTCCAAAGTTTGGTGAT+TGG | 0.430040 | 8.3:+75393472 | MS.gene072291:CDS |
| CCTTCAAGACAAAGTACTGC+TGG | 0.444639 | 8.3:+75393129 | MS.gene072291:CDS |
| CTGATGTTGCAGCCTGATAA+AGG | 0.447195 | 8.3:+75393444 | MS.gene072291:intron |
| GTTTCATCCCCTCGATTAGC+TGG | 0.459418 | 8.3:-75393288 | None:intergenic |
| GGTCTTAACCGAGATCTTCC+CGG | 0.461138 | 8.3:-75393267 | None:intergenic |
| CTTTGTCATTAGTTTGGTTG+CGG | 0.463206 | 8.3:-75393614 | None:intergenic |
| AAGACGAGGTGTAGAATCAT+TGG | 0.469444 | 8.3:-75393076 | None:intergenic |
| CTGGAAGAGATAGTCCCTCT+TGG | 0.470130 | 8.3:+75393205 | MS.gene072291:CDS |
| GGCCTCTCATTAGGTGTGCC+GGG | 0.483664 | 8.3:-75393582 | None:intergenic |
| ACGGTCACCCCTTCATCGTC+AGG | 0.485020 | 8.3:+75393170 | MS.gene072291:CDS |
| ACATCCCAATCACCAAACTT+TGG | 0.494032 | 8.3:-75393477 | None:intergenic |
| GGTTTGGTATTGGAAGGATG+TGG | 0.498106 | 8.3:-75392919 | None:intergenic |
| GAGCTCTAGCCTGACGATGA+AGG | 0.501709 | 8.3:-75393179 | None:intergenic |
| GTATAGCCATCAGCTGATGC+AGG | 0.504777 | 8.3:-75393507 | None:intergenic |
| TGGAAGAGATAGTCCCTCTT+GGG | 0.516000 | 8.3:+75393206 | MS.gene072291:CDS |
| TAAGCAATATGTTGACTCTC+CGG | 0.517127 | 8.3:+75393023 | MS.gene072291:CDS |
| GGATCTATCTGGAAAGGGAT+TGG | 0.518744 | 8.3:+75392957 | MS.gene072291:CDS |
| GCCATGACAATGTAAGCAAT+AGG | 0.523259 | 8.3:+75393049 | MS.gene072291:CDS |
| GGAGAGTCAACATATTGCTT+AGG | 0.526243 | 8.3:-75393021 | None:intergenic |
| AGCTCTAGCCTGACGATGAA+GGG | 0.528571 | 8.3:-75393178 | None:intergenic |
| TCCTATTGCTTACATTGTCA+TGG | 0.532366 | 8.3:-75393050 | None:intergenic |
| AATGATTCTACACCTCGTCT+TGG | 0.537591 | 8.3:+75393078 | MS.gene072291:CDS |
| TCAGAGGATCTATCTGGAAA+GGG | 0.538299 | 8.3:+75392952 | MS.gene072291:CDS |
| CTTACATTGTCATGGCGAGC+CGG | 0.540021 | 8.3:-75393042 | None:intergenic |
| AGATCCTCTGAATTGGCTCT+GGG | 0.540595 | 8.3:-75392940 | None:intergenic |
| GCTCTGGGTTTGGTATTGGA+AGG | 0.547279 | 8.3:-75392925 | None:intergenic |
| TTCAGAGGATCTATCTGGAA+AGG | 0.551409 | 8.3:+75392951 | MS.gene072291:CDS |
| ATGGTACACCGGGAAGATCT+CGG | 0.552829 | 8.3:+75393259 | MS.gene072291:CDS |
| GGTGGGGCCGGACATGCACC+CGG | 0.553291 | 8.3:+75393564 | MS.gene072291:CDS |
| TCTACACCTCGTCTTGGAGT+AGG | 0.553839 | 8.3:+75393084 | MS.gene072291:CDS |
| CGTCAGGCTAGAGCTCCTGC+TGG | 0.560727 | 8.3:+75393186 | MS.gene072291:CDS |
| CCAAACTAATGACAAAGCTC+AGG | 0.564139 | 8.3:+75393620 | MS.gene072291:CDS |
| GACAGCAGCCATGGTACACC+GGG | 0.575291 | 8.3:+75393249 | MS.gene072291:CDS |
| GAGGGACTATCTCTTCCAGC+AGG | 0.582014 | 8.3:-75393201 | None:intergenic |
| AATTCCTATGACAGCAGCCA+TGG | 0.582281 | 8.3:+75393240 | MS.gene072291:CDS |
| TTATTCTTTCCTTCCCAAGA+GGG | 0.587434 | 8.3:-75393219 | None:intergenic |
| GGTCTGAGCACAGCGTTGAA+CGG | 0.589876 | 8.3:+75393151 | MS.gene072291:CDS |
| CTTCAAGACAAAGTACTGCT+GGG | 0.593023 | 8.3:+75393130 | MS.gene072291:CDS |
| TGACAGCAGCCATGGTACAC+CGG | 0.594877 | 8.3:+75393248 | MS.gene072291:CDS |
| GGTTAAGACCAGCTAATCGA+GGG | 0.601360 | 8.3:+75393280 | MS.gene072291:CDS |
| TTGCAATATGTTAAACAGGA+GGG | 0.612341 | 8.3:-75393647 | None:intergenic |
| AGTAACCCTGCATCAGCTGA+TGG | 0.613824 | 8.3:+75393501 | MS.gene072291:CDS |
| GTTTGGTTGCGGATAACATG+CGG | 0.615150 | 8.3:-75393603 | None:intergenic |
| AAGAGAGGAGAGACAGGGTG+GGG | 0.615205 | 8.3:+75393548 | MS.gene072291:CDS |
| GAGATCTTCCCGGTGTACCA+TGG | 0.615868 | 8.3:-75393257 | None:intergenic |
| CGGTTAAGACCAGCTAATCG+AGG | 0.616969 | 8.3:+75393279 | MS.gene072291:CDS |
| CACCCGGCACACCTAATGAG+AGG | 0.620241 | 8.3:+75393580 | MS.gene072291:CDS |
| GCTCTAGCCTGACGATGAAG+GGG | 0.622879 | 8.3:-75393177 | None:intergenic |
| TTTGCAATATGTTAAACAGG+AGG | 0.630782 | 8.3:-75393648 | None:intergenic |
| TAAGAGAGGAGAGACAGGGT+GGG | 0.631626 | 8.3:+75393547 | MS.gene072291:CDS |
| TATAGCCATCAGCTGATGCA+GGG | 0.633969 | 8.3:-75393506 | None:intergenic |
| GAGTCGCATAAAAGTCTCGA+TGG | 0.635478 | 8.3:+75392994 | MS.gene072291:CDS |
| AGAGATAGTCCCTCTTGGGA+AGG | 0.636769 | 8.3:+75393210 | MS.gene072291:CDS |
| ATTATTCTTTCCTTCCCAAG+AGG | 0.649386 | 8.3:-75393220 | None:intergenic |
| CAAACCCAGAGCCAATTCAG+AGG | 0.659677 | 8.3:+75392936 | MS.gene072291:CDS |
| GTAAGAGAGGAGAGACAGGG+TGG | 0.661332 | 8.3:+75393546 | MS.gene072291:CDS |
| AAAGTAAGAGAGGAGAGACA+GGG | 0.706360 | 8.3:+75393543 | MS.gene072291:CDS |
| GTTAAGACCAGCTAATCGAG+GGG | 0.714196 | 8.3:+75393281 | MS.gene072291:CDS |
| GCAGAACCTACTCCAAGACG+AGG | 0.735764 | 8.3:-75393090 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GCATATATATTATTGTACCT+TGG | + | chr8.3:75393374-75393393 | MS.gene072291:intron | 25.0% |
| !! | TTGCGAATATGTTATGATTT+TGG | + | chr8.3:75393417-75393436 | MS.gene072291:intron | 25.0% |
| AAAATATCACGATGATTCCA+AGG | - | chr8.3:75393394-75393413 | None:intergenic | 30.0% | |
| ! | ACTAAATCGACATTTTCTTC+AGG | - | chr8.3:75392874-75392893 | None:intergenic | 30.0% |
| ! | CATTTTCAACAAAGTAAGAG+AGG | + | chr8.3:75393533-75393552 | MS.gene072291:CDS | 30.0% |
| ! | CTAAATCGACATTTTCTTCA+GGG | - | chr8.3:75392873-75392892 | None:intergenic | 30.0% |
| ATTATTCTTTCCTTCCCAAG+AGG | - | chr8.3:75393223-75393242 | None:intergenic | 35.0% | |
| TCCTATTGCTTACATTGTCA+TGG | - | chr8.3:75393053-75393072 | None:intergenic | 35.0% | |
| TTATTCTTTCCTTCCCAAGA+GGG | - | chr8.3:75393222-75393241 | None:intergenic | 35.0% | |
| ! | ACATTTTCTTCAGGGTCATT+CGG | - | chr8.3:75392865-75392884 | None:intergenic | 35.0% |
| ! | CTTTGTCATTAGTTTGGTTG+CGG | - | chr8.3:75393617-75393636 | None:intergenic | 35.0% |
| ! | TGTTCCAAAGTTTGGTGATT+GGG | + | chr8.3:75393473-75393492 | MS.gene072291:CDS | 35.0% |
| ! | TTTGTCTTGAAGGTTTTCGT+CGG | - | chr8.3:75393122-75393141 | None:intergenic | 35.0% |
| !! | TAAGCAATATGTTGACTCTC+CGG | + | chr8.3:75393023-75393042 | MS.gene072291:CDS | 35.0% |
| AAAGTAAGAGAGGAGAGACA+GGG | + | chr8.3:75393543-75393562 | MS.gene072291:CDS | 40.0% | |
| AAGACGAGGTGTAGAATCAT+TGG | - | chr8.3:75393079-75393098 | None:intergenic | 40.0% | |
| AATGATTCTACACCTCGTCT+TGG | + | chr8.3:75393078-75393097 | MS.gene072291:CDS | 40.0% | |
| ACATCCCAATCACCAAACTT+TGG | - | chr8.3:75393480-75393499 | None:intergenic | 40.0% | |
| CCAAACTAATGACAAAGCTC+AGG | + | chr8.3:75393620-75393639 | MS.gene072291:CDS | 40.0% | |
| GCCATGACAATGTAAGCAAT+AGG | + | chr8.3:75393049-75393068 | MS.gene072291:CDS | 40.0% | |
| GGAGAGTCAACATATTGCTT+AGG | - | chr8.3:75393024-75393043 | None:intergenic | 40.0% | |
| TCAGAGGATCTATCTGGAAA+GGG | + | chr8.3:75392952-75392971 | MS.gene072291:CDS | 40.0% | |
| TCCAGATAGATCCTCTGAAT+TGG | - | chr8.3:75392950-75392969 | None:intergenic | 40.0% | |
| TCCTATGTTATCACCATGCA+TGG | + | chr8.3:75393333-75393352 | MS.gene072291:intron | 40.0% | |
| TGCATGGTGATAACATAGGA+TGG | - | chr8.3:75393333-75393352 | None:intergenic | 40.0% | |
| TTCAGAGGATCTATCTGGAA+AGG | + | chr8.3:75392951-75392970 | MS.gene072291:CDS | 40.0% | |
| TTTACTCTTCATGCCATGCA+TGG | - | chr8.3:75393349-75393368 | None:intergenic | 40.0% | |
| ! | CATTTTCTTCAGGGTCATTC+GGG | - | chr8.3:75392864-75392883 | None:intergenic | 40.0% |
| ! | CCTGAGCTTTGTCATTAGTT+TGG | - | chr8.3:75393623-75393642 | None:intergenic | 40.0% |
| ! | CTGTTCCAAAGTTTGGTGAT+TGG | + | chr8.3:75393472-75393491 | MS.gene072291:CDS | 40.0% |
| !! | CTTCAAGACAAAGTACTGCT+GGG | + | chr8.3:75393130-75393149 | MS.gene072291:CDS | 40.0% |
| AATTCCTATGACAGCAGCCA+TGG | + | chr8.3:75393240-75393259 | MS.gene072291:CDS | 45.0% | |
| ATAACATGCGGCCTCTCATT+AGG | - | chr8.3:75393594-75393613 | None:intergenic | 45.0% | |
| CAAAGTAAGAGAGGAGAGAC+AGG | + | chr8.3:75393542-75393561 | MS.gene072291:CDS | 45.0% | |
| CCAGCAGTACTTTGTCTTGA+AGG | - | chr8.3:75393132-75393151 | None:intergenic | 45.0% | |
| CTGATGTTGCAGCCTGATAA+AGG | + | chr8.3:75393444-75393463 | MS.gene072291:intron | 45.0% | |
| GAGTCGCATAAAAGTCTCGA+TGG | + | chr8.3:75392994-75393013 | MS.gene072291:CDS | 45.0% | |
| GCCAATTCAGAGGATCTATC+TGG | + | chr8.3:75392946-75392965 | MS.gene072291:CDS | 45.0% | |
| GCCATGCATGGTGATAACAT+AGG | - | chr8.3:75393337-75393356 | None:intergenic | 45.0% | |
| GGATCTATCTGGAAAGGGAT+TGG | + | chr8.3:75392957-75392976 | MS.gene072291:CDS | 45.0% | |
| GGTTAAGACCAGCTAATCGA+GGG | + | chr8.3:75393280-75393299 | MS.gene072291:CDS | 45.0% | |
| GTTAAGACCAGCTAATCGAG+GGG | + | chr8.3:75393281-75393300 | MS.gene072291:CDS | 45.0% | |
| GTTTGGTTGCGGATAACATG+CGG | - | chr8.3:75393606-75393625 | None:intergenic | 45.0% | |
| TATAGCCATCAGCTGATGCA+GGG | - | chr8.3:75393509-75393528 | None:intergenic | 45.0% | |
| TGGAAGAGATAGTCCCTCTT+GGG | + | chr8.3:75393206-75393225 | MS.gene072291:CDS | 45.0% | |
| ! | AGATCCTCTGAATTGGCTCT+GGG | - | chr8.3:75392943-75392962 | None:intergenic | 45.0% |
| ! | GGTTTGGTATTGGAAGGATG+TGG | - | chr8.3:75392922-75392941 | None:intergenic | 45.0% |
| ! | TAGATCCTCTGAATTGGCTC+TGG | - | chr8.3:75392944-75392963 | None:intergenic | 45.0% |
| !! | ATTGGCTCTGGGTTTGGTAT+TGG | - | chr8.3:75392932-75392951 | None:intergenic | 45.0% |
| !! | CCTTCAAGACAAAGTACTGC+TGG | + | chr8.3:75393129-75393148 | MS.gene072291:CDS | 45.0% |
| AGAGATAGTCCCTCTTGGGA+AGG | + | chr8.3:75393210-75393229 | MS.gene072291:CDS | 50.0% | |
| AGTAACCCTGCATCAGCTGA+TGG | + | chr8.3:75393501-75393520 | MS.gene072291:CDS | 50.0% | |
| ATGGTACACCGGGAAGATCT+CGG | + | chr8.3:75393259-75393278 | MS.gene072291:CDS | 50.0% | |
| CAAACCCAGAGCCAATTCAG+AGG | + | chr8.3:75392936-75392955 | MS.gene072291:CDS | 50.0% | |
| CGGTTAAGACCAGCTAATCG+AGG | + | chr8.3:75393279-75393298 | MS.gene072291:CDS | 50.0% | |
| CTGGAAGAGATAGTCCCTCT+TGG | + | chr8.3:75393205-75393224 | MS.gene072291:CDS | 50.0% | |
| CTTACATTGTCATGGCGAGC+CGG | - | chr8.3:75393045-75393064 | None:intergenic | 50.0% | |
| GGAACAGCTGCACCTTTATC+AGG | - | chr8.3:75393459-75393478 | None:intergenic | 50.0% | |
| GGTCTTAACCGAGATCTTCC+CGG | - | chr8.3:75393270-75393289 | None:intergenic | 50.0% | |
| GGTGCAGCTGTTCCAAAGTT+TGG | + | chr8.3:75393465-75393484 | MS.gene072291:CDS | 50.0% | |
| GTATAGCCATCAGCTGATGC+AGG | - | chr8.3:75393510-75393529 | None:intergenic | 50.0% | |
| GTTTCATCCCCTCGATTAGC+TGG | - | chr8.3:75393291-75393310 | None:intergenic | 50.0% | |
| TAAGAGAGGAGAGACAGGGT+GGG | + | chr8.3:75393547-75393566 | MS.gene072291:CDS | 50.0% | |
| TCTACACCTCGTCTTGGAGT+AGG | + | chr8.3:75393084-75393103 | MS.gene072291:CDS | 50.0% | |
| TGTACCATGGCTGCTGTCAT+AGG | - | chr8.3:75393247-75393266 | None:intergenic | 50.0% | |
| ! | AGCTCTAGCCTGACGATGAA+GGG | - | chr8.3:75393181-75393200 | None:intergenic | 50.0% |
| ! | GCTCTGGGTTTGGTATTGGA+AGG | - | chr8.3:75392928-75392947 | None:intergenic | 50.0% |
| !! | CTCTGAATTGGCTCTGGGTT+TGG | - | chr8.3:75392938-75392957 | None:intergenic | 50.0% |
| AAGAGAGGAGAGACAGGGTG+GGG | + | chr8.3:75393548-75393567 | MS.gene072291:CDS | 55.0% | |
| GAGATCTTCCCGGTGTACCA+TGG | - | chr8.3:75393260-75393279 | None:intergenic | 55.0% | |
| GAGGGACTATCTCTTCCAGC+AGG | - | chr8.3:75393204-75393223 | None:intergenic | 55.0% | |
| GCAGAACCTACTCCAAGACG+AGG | - | chr8.3:75393093-75393112 | None:intergenic | 55.0% | |
| GCTCTAGCCTGACGATGAAG+GGG | - | chr8.3:75393180-75393199 | None:intergenic | 55.0% | |
| GTAAGAGAGGAGAGACAGGG+TGG | + | chr8.3:75393546-75393565 | MS.gene072291:CDS | 55.0% | |
| TGACAGCAGCCATGGTACAC+CGG | + | chr8.3:75393248-75393267 | MS.gene072291:CDS | 55.0% | |
| ! | GAGCTCTAGCCTGACGATGA+AGG | - | chr8.3:75393182-75393201 | None:intergenic | 55.0% |
| ! | GGTCTGAGCACAGCGTTGAA+CGG | + | chr8.3:75393151-75393170 | MS.gene072291:CDS | 55.0% |
| ACGGTCACCCCTTCATCGTC+AGG | + | chr8.3:75393170-75393189 | MS.gene072291:CDS | 60.0% | |
| CACCCGGCACACCTAATGAG+AGG | + | chr8.3:75393580-75393599 | MS.gene072291:CDS | 60.0% | |
| CGGCCTCTCATTAGGTGTGC+CGG | - | chr8.3:75393586-75393605 | None:intergenic | 60.0% | |
| GACAGCAGCCATGGTACACC+GGG | + | chr8.3:75393249-75393268 | MS.gene072291:CDS | 60.0% | |
| GGCCTCTCATTAGGTGTGCC+GGG | - | chr8.3:75393585-75393604 | None:intergenic | 60.0% | |
| AGGTGTGCCGGGTGCATGTC+CGG | - | chr8.3:75393574-75393593 | None:intergenic | 65.0% | |
| CGTCAGGCTAGAGCTCCTGC+TGG | + | chr8.3:75393186-75393205 | MS.gene072291:CDS | 65.0% | |
| GAGGAGAGACAGGGTGGGGC+CGG | + | chr8.3:75393552-75393571 | MS.gene072291:CDS | 70.0% | |
| GGTGGGGCCGGACATGCACC+CGG | + | chr8.3:75393564-75393583 | MS.gene072291:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 75392853 | 75393659 | 75392853 | ID=MS.gene072291 |
| chr8.3 | mRNA | 75392853 | 75393659 | 75392853 | ID=MS.gene072291.t1;Parent=MS.gene072291 |
| chr8.3 | exon | 75392853 | 75393311 | 75392853 | ID=MS.gene072291.t1.exon1;Parent=MS.gene072291.t1 |
| chr8.3 | CDS | 75392853 | 75393311 | 75392853 | ID=cds.MS.gene072291.t1;Parent=MS.gene072291.t1 |
| chr8.3 | exon | 75393456 | 75393659 | 75393456 | ID=MS.gene072291.t1.exon2;Parent=MS.gene072291.t1 |
| chr8.3 | CDS | 75393456 | 75393659 | 75393456 | ID=cds.MS.gene072291.t1;Parent=MS.gene072291.t1 |
| Gene Sequence |
| Protein sequence |
