Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056185.t1 | XP_003627756.1 | 92.1 | 432 | 30 | 2 | 1 | 429 | 1 | 431 | 2.60E-235 | 824.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056185.t1 | A8MRX0 | 52.7 | 425 | 192 | 4 | 2 | 418 | 11 | 434 | 3.3e-130 | 466.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056185.t1 | G7LEJ7 | 92.1 | 432 | 30 | 2 | 1 | 429 | 1 | 431 | 1.9e-235 | 824.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04986 | MS.gene056185 | 0.858392 | 8.50E-63 | -1.69E-46 |
| MS.gene05156 | MS.gene056185 | 0.815884 | 7.35E-52 | -1.69E-46 |
| MS.gene055204 | MS.gene056185 | 0.802718 | 4.91E-49 | -1.69E-46 |
| MS.gene055776 | MS.gene056185 | -0.801685 | 8.01E-49 | -1.69E-46 |
| MS.gene055942 | MS.gene056185 | 0.806516 | 7.92E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene06298 | 0.800511 | 1.39E-48 | -1.69E-46 |
| MS.gene056185 | MS.gene063125 | 0.816565 | 5.18E-52 | -1.69E-46 |
| MS.gene056185 | MS.gene064093 | 0.802343 | 5.87E-49 | -1.69E-46 |
| MS.gene056185 | MS.gene065380 | 0.834646 | 2.66E-56 | -1.69E-46 |
| MS.gene056185 | MS.gene065509 | 0.802019 | 6.84E-49 | -1.69E-46 |
| MS.gene056185 | MS.gene066532 | 0.829001 | 6.57E-55 | -1.69E-46 |
| MS.gene056185 | MS.gene066628 | 0.836957 | 6.90E-57 | -1.69E-46 |
| MS.gene056185 | MS.gene067091 | 0.83306 | 6.62E-56 | -1.69E-46 |
| MS.gene056185 | MS.gene067531 | 0.84592 | 3.01E-59 | -1.69E-46 |
| MS.gene056185 | MS.gene072291 | 0.808193 | 3.49E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene072436 | 0.808398 | 3.16E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene20344 | 0.809837 | 1.55E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene20350 | 0.812692 | 3.73E-51 | -1.69E-46 |
| MS.gene056185 | MS.gene35126 | 0.806104 | 9.67E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene38046 | -0.814458 | 1.53E-51 | -1.69E-46 |
| MS.gene056185 | MS.gene45765 | 0.918424 | 1.58E-86 | -1.69E-46 |
| MS.gene056185 | MS.gene47049 | 0.812392 | 4.34E-51 | -1.69E-46 |
| MS.gene056185 | MS.gene52062 | 0.822492 | 2.30E-53 | -1.69E-46 |
| MS.gene056185 | MS.gene52226 | 0.836948 | 6.94E-57 | -1.69E-46 |
| MS.gene056185 | MS.gene54952 | 0.835154 | 1.98E-56 | -1.69E-46 |
| MS.gene056185 | MS.gene55979 | 0.803413 | 3.53E-49 | -1.69E-46 |
| MS.gene056185 | MS.gene56130 | 0.801317 | 9.53E-49 | -1.69E-46 |
| MS.gene056185 | MS.gene56769 | 0.844459 | 7.46E-59 | -1.69E-46 |
| MS.gene056185 | MS.gene59409 | 0.800932 | 1.14E-48 | -1.69E-46 |
| MS.gene056185 | MS.gene66360 | 0.813099 | 3.04E-51 | -1.69E-46 |
| MS.gene056185 | MS.gene67131 | 0.803829 | 2.89E-49 | -1.69E-46 |
| MS.gene056185 | MS.gene68124 | -0.825195 | 5.35E-54 | -1.69E-46 |
| MS.gene056185 | MS.gene68126 | -0.814089 | 1.84E-51 | -1.69E-46 |
| MS.gene056185 | MS.gene68181 | 0.807442 | 5.04E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene70806 | -0.826878 | 2.13E-54 | -1.69E-46 |
| MS.gene056185 | MS.gene73256 | 0.814791 | 1.29E-51 | -1.69E-46 |
| MS.gene056185 | MS.gene73393 | 0.801159 | 1.03E-48 | -1.69E-46 |
| MS.gene056185 | MS.gene73644 | 0.812047 | 5.16E-51 | -1.69E-46 |
| MS.gene056185 | MS.gene73753 | 0.801271 | 9.74E-49 | -1.69E-46 |
| MS.gene056185 | MS.gene75517 | 0.835961 | 1.24E-56 | -1.69E-46 |
| MS.gene056185 | MS.gene76310 | 0.808774 | 2.63E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene76453 | 0.804255 | 2.36E-49 | -1.69E-46 |
| MS.gene056185 | MS.gene78327 | 0.812781 | 3.57E-51 | -1.69E-46 |
| MS.gene056185 | MS.gene80055 | 0.81489 | 1.22E-51 | -1.69E-46 |
| MS.gene056185 | MS.gene80056 | 0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene056185 | MS.gene81230 | -0.811983 | 5.33E-51 | -1.69E-46 |
| MS.gene056185 | MS.gene84712 | 0.838804 | 2.31E-57 | -1.69E-46 |
| MS.gene056185 | MS.gene87582 | 0.83299 | 6.89E-56 | -1.69E-46 |
| MS.gene056185 | MS.gene90518 | 0.810886 | 9.22E-51 | -1.69E-46 |
| MS.gene056185 | MS.gene92394 | 0.919343 | 5.07E-87 | -1.69E-46 |
| MS.gene056185 | MS.gene92396 | 0.929404 | 7.29E-93 | -1.69E-46 |
| MS.gene056185 | MS.gene92589 | 0.824479 | 7.89E-54 | -1.69E-46 |
| MS.gene056185 | MS.gene98636 | 0.818844 | 1.59E-52 | -1.69E-46 |
| MS.gene056185 | MS.gene99191 | 0.828973 | 6.67E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056185.t1 | MTR_8g037910 | 92.130 | 432 | 30 | 2 | 1 | 429 | 1 | 431 | 0.0 | 826 |
| MS.gene056185.t1 | MTR_8g037880 | 84.954 | 432 | 62 | 1 | 1 | 429 | 1 | 432 | 0.0 | 769 |
| MS.gene056185.t1 | MTR_8g037910 | 93.375 | 317 | 20 | 1 | 1 | 317 | 1 | 316 | 0.0 | 613 |
| MS.gene056185.t1 | MTR_8g037910 | 92.674 | 273 | 19 | 1 | 1 | 273 | 1 | 272 | 0.0 | 524 |
| MS.gene056185.t1 | MTR_5g012130 | 51.508 | 431 | 196 | 5 | 4 | 424 | 13 | 440 | 1.70e-149 | 432 |
| MS.gene056185.t1 | MTR_5g012130 | 54.403 | 318 | 142 | 2 | 4 | 318 | 33 | 350 | 9.85e-117 | 345 |
| MS.gene056185.t1 | MTR_3g437580 | 41.435 | 432 | 228 | 10 | 4 | 417 | 13 | 437 | 6.51e-109 | 329 |
| MS.gene056185.t1 | MTR_3g437580 | 43.385 | 325 | 169 | 6 | 4 | 314 | 13 | 336 | 5.53e-88 | 272 |
| MS.gene056185.t1 | MTR_5g012130 | 50.403 | 248 | 120 | 2 | 4 | 248 | 33 | 280 | 1.82e-75 | 237 |
| MS.gene056185.t1 | MTR_3g109520 | 29.524 | 210 | 119 | 6 | 6 | 212 | 41 | 224 | 1.95e-18 | 87.4 |
| MS.gene056185.t1 | MTR_2g450510 | 27.273 | 253 | 127 | 8 | 3 | 222 | 4 | 232 | 1.22e-15 | 79.3 |
| MS.gene056185.t1 | MTR_7g107710 | 22.776 | 281 | 177 | 5 | 4 | 279 | 6 | 251 | 3.26e-15 | 77.4 |
| MS.gene056185.t1 | MTR_2g450310 | 26.877 | 253 | 128 | 8 | 3 | 222 | 4 | 232 | 1.41e-14 | 75.9 |
| MS.gene056185.t1 | MTR_1g011630 | 24.519 | 208 | 128 | 6 | 6 | 212 | 18 | 197 | 3.00e-14 | 74.3 |
| MS.gene056185.t1 | MTR_7g107690 | 25.000 | 236 | 142 | 6 | 3 | 231 | 7 | 214 | 9.08e-14 | 72.8 |
| MS.gene056185.t1 | MTR_1g008380 | 25.837 | 209 | 127 | 6 | 6 | 212 | 44 | 226 | 4.27e-12 | 68.2 |
| MS.gene056185.t1 | MTR_5g033260 | 24.286 | 210 | 132 | 5 | 4 | 211 | 6 | 190 | 7.04e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056185.t1 | AT1G62620 | 52.706 | 425 | 191 | 4 | 4 | 418 | 13 | 437 | 1.45e-157 | 452 |
| MS.gene056185.t1 | AT1G63370 | 52.235 | 425 | 193 | 4 | 4 | 418 | 13 | 437 | 7.90e-156 | 448 |
| MS.gene056185.t1 | AT1G12140 | 52.706 | 425 | 192 | 4 | 2 | 418 | 11 | 434 | 9.65e-154 | 443 |
| MS.gene056185.t1 | AT1G12140 | 52.706 | 425 | 192 | 4 | 2 | 418 | 11 | 434 | 9.65e-154 | 443 |
| MS.gene056185.t1 | AT1G12200 | 52.693 | 427 | 190 | 4 | 4 | 418 | 14 | 440 | 2.24e-152 | 440 |
| MS.gene056185.t1 | AT1G12140 | 52.471 | 425 | 191 | 5 | 2 | 418 | 11 | 432 | 1.21e-150 | 435 |
| MS.gene056185.t1 | AT1G62600 | 51.288 | 427 | 196 | 4 | 4 | 418 | 13 | 439 | 1.39e-148 | 430 |
| MS.gene056185.t1 | AT1G12160 | 49.203 | 439 | 195 | 7 | 4 | 417 | 12 | 447 | 4.49e-147 | 427 |
| MS.gene056185.t1 | AT1G62620 | 55.200 | 375 | 161 | 3 | 4 | 371 | 13 | 387 | 4.22e-146 | 421 |
| MS.gene056185.t1 | AT1G62580 | 52.235 | 425 | 192 | 5 | 4 | 418 | 14 | 437 | 5.82e-145 | 421 |
| MS.gene056185.t1 | AT1G62560 | 48.349 | 424 | 207 | 5 | 4 | 417 | 13 | 434 | 1.18e-144 | 420 |
| MS.gene056185.t1 | AT1G12130 | 50.562 | 445 | 192 | 7 | 4 | 424 | 13 | 453 | 5.55e-144 | 419 |
| MS.gene056185.t1 | AT1G65860 | 49.289 | 422 | 205 | 5 | 4 | 417 | 13 | 433 | 6.87e-144 | 418 |
| MS.gene056185.t1 | AT1G62540 | 50.711 | 422 | 199 | 5 | 4 | 417 | 13 | 433 | 5.95e-142 | 413 |
| MS.gene056185.t1 | AT1G62570 | 49.764 | 424 | 200 | 6 | 4 | 417 | 13 | 433 | 9.52e-139 | 405 |
| MS.gene056185.t1 | AT1G62540 | 48.546 | 447 | 196 | 7 | 4 | 417 | 13 | 458 | 3.11e-138 | 405 |
| MS.gene056185.t1 | AT1G62580 | 48.690 | 458 | 191 | 8 | 4 | 418 | 14 | 470 | 8.98e-138 | 404 |
| MS.gene056185.t1 | AT1G62600 | 53.316 | 377 | 167 | 3 | 4 | 371 | 13 | 389 | 9.41e-137 | 398 |
| MS.gene056185.t1 | AT1G62560 | 50.660 | 379 | 178 | 4 | 4 | 375 | 13 | 389 | 5.16e-136 | 396 |
| MS.gene056185.t1 | AT1G62540 | 48.578 | 422 | 190 | 7 | 4 | 417 | 13 | 415 | 5.51e-131 | 385 |
| MS.gene056185.t1 | AT1G63340 | 47.518 | 423 | 175 | 5 | 4 | 418 | 14 | 397 | 7.89e-130 | 381 |
| MS.gene056185.t1 | AT1G63370 | 55.728 | 323 | 136 | 3 | 4 | 319 | 13 | 335 | 2.42e-125 | 367 |
| MS.gene056185.t1 | AT5G61290 | 44.573 | 433 | 214 | 7 | 4 | 417 | 16 | 441 | 1.08e-119 | 357 |
| MS.gene056185.t1 | AT1G12200 | 55.590 | 322 | 135 | 2 | 4 | 317 | 14 | 335 | 2.46e-119 | 353 |
| MS.gene056185.t1 | AT5G07800 | 42.299 | 435 | 225 | 9 | 3 | 417 | 15 | 443 | 1.07e-111 | 336 |
| MS.gene056185.t1 | AT1G62580 | 54.079 | 331 | 135 | 3 | 4 | 317 | 14 | 344 | 4.04e-111 | 331 |
| MS.gene056185.t1 | AT1G63390 | 58.042 | 143 | 53 | 2 | 4 | 139 | 13 | 155 | 1.16e-42 | 148 |
| MS.gene056185.t1 | AT5G45180 | 25.000 | 480 | 236 | 22 | 3 | 390 | 12 | 459 | 1.98e-19 | 90.5 |
| MS.gene056185.t1 | AT1G19250 | 29.461 | 241 | 115 | 8 | 3 | 212 | 12 | 228 | 2.12e-16 | 81.6 |
| MS.gene056185.t1 | AT4G13260 | 23.445 | 209 | 133 | 5 | 6 | 212 | 30 | 213 | 1.22e-13 | 72.0 |
| MS.gene056185.t1 | AT4G13260 | 23.445 | 209 | 133 | 5 | 6 | 212 | 30 | 213 | 3.09e-13 | 71.6 |
| MS.gene056185.t1 | AT5G11320 | 23.188 | 207 | 130 | 5 | 6 | 212 | 19 | 196 | 6.83e-12 | 67.0 |
| MS.gene056185.t1 | AT5G11320 | 23.188 | 207 | 130 | 5 | 6 | 212 | 19 | 196 | 1.73e-11 | 66.2 |
| MS.gene056185.t1 | AT1G04610 | 22.897 | 214 | 129 | 5 | 6 | 211 | 39 | 224 | 1.85e-11 | 66.2 |
| MS.gene056185.t1 | AT5G25620 | 23.364 | 214 | 137 | 5 | 6 | 217 | 34 | 222 | 3.15e-11 | 65.5 |
| MS.gene056185.t1 | AT5G25620 | 23.364 | 214 | 137 | 5 | 6 | 217 | 34 | 222 | 4.13e-11 | 65.1 |
Find 120 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACAGGTTGTGATCTTAAT+TGG | 0.129363 | 8.1:+65685276 | MS.gene056185:intron |
| CCGAGACTTGCTTTGGTTCC+TGG | 0.187863 | 8.1:+65684547 | MS.gene056185:CDS |
| CTGTGATCCGAGAACGTTTC+CGG | 0.221154 | 8.1:+65684327 | MS.gene056185:CDS |
| TCATTCCATACGTCCGTTTC+AGG | 0.249205 | 8.1:+65686136 | MS.gene056185:CDS |
| GCTCCATGGCTCTCTTTCAT+TGG | 0.284807 | 8.1:+65685857 | MS.gene056185:CDS |
| AGAGGAAAGGAGGGAAGGAC+TGG | 0.304169 | 8.1:+65684443 | MS.gene056185:CDS |
| CAAATACCACATTCCTTTCC+TGG | 0.326620 | 8.1:+65685760 | MS.gene056185:CDS |
| TTACTATTCCATTAGTTTCC+AGG | 0.333072 | 8.1:-65685778 | None:intergenic |
| ATTCCTTTCCTGGAAACTAA+TGG | 0.347863 | 8.1:+65685770 | MS.gene056185:CDS |
| TTACCCTGTACAGTGAATTA+TGG | 0.368004 | 8.1:-65685614 | None:intergenic |
| GGTTGCCTCCGTTAGAAGAT+TGG | 0.375234 | 8.1:+65687267 | MS.gene056185:CDS |
| AACTTCATACCCTTCAATAG+TGG | 0.379745 | 8.1:-65685378 | None:intergenic |
| ATGACTGGGATGATAACTAT+TGG | 0.380916 | 8.1:+65687342 | MS.gene056185:CDS |
| CTGTGAACTGTTTCTCTGGT+TGG | 0.381244 | 8.1:-65684223 | None:intergenic |
| GAAGCGGTTATTGTGTGTTC+AGG | 0.389205 | 8.1:+65684511 | MS.gene056185:CDS |
| ATACCCTTCAATAGTGGATT+CGG | 0.390856 | 8.1:-65685372 | None:intergenic |
| TGTGAACTGTTTCTCTGGTT+GGG | 0.399952 | 8.1:-65684222 | None:intergenic |
| TGTGATCCGAGAACGTTTCC+GGG | 0.400644 | 8.1:+65684328 | MS.gene056185:CDS |
| TCATGACCCGGAAACGTTCT+CGG | 0.402567 | 8.1:-65684334 | None:intergenic |
| TGTGGAACCGAGACTTGCTT+TGG | 0.402751 | 8.1:+65684540 | MS.gene056185:CDS |
| TCACTACCTCCGCTTCAAAT+CGG | 0.403777 | 8.1:-65684414 | None:intergenic |
| CACTACCTCCGCTTCAAATC+GGG | 0.403988 | 8.1:-65684413 | None:intergenic |
| GGCGATGAGGCCGGAGACTC+CGG | 0.404278 | 8.1:-65684086 | None:intergenic |
| CAATGGCTAGCGGCACAGAT+TGG | 0.414104 | 8.1:+65687245 | MS.gene056185:CDS |
| AGATTCCATCATTTCTTCTT+CGG | 0.421032 | 8.1:-65686060 | None:intergenic |
| GCCTTCCTGTTGTAGCTCCT+TGG | 0.421074 | 8.1:-65684110 | None:intergenic |
| TTCCTCCTTCGCTGGCTCCA+TGG | 0.424941 | 8.1:+65685843 | MS.gene056185:CDS |
| GACATCTCAAAAGATATTGC+AGG | 0.428767 | 8.1:+65685318 | MS.gene056185:CDS |
| TACAGGTTGTGATCTTAATT+GGG | 0.433986 | 8.1:+65685277 | MS.gene056185:intron |
| AAATCTTCCAAGGCAAATCA+TGG | 0.439066 | 8.1:+65684270 | MS.gene056185:CDS |
| ATTAAATGTGTATATGAAGA+TGG | 0.442499 | 8.1:+65685550 | MS.gene056185:CDS |
| GAGGAAAGGAGGGAAGGACT+GGG | 0.443036 | 8.1:+65684444 | MS.gene056185:CDS |
| GTGATCGGCGCCGGAGTCTC+CGG | 0.449086 | 8.1:+65684076 | MS.gene056185:CDS |
| GGCTTGGTTGCCTTTGAAGA+TGG | 0.455524 | 8.1:+65685571 | MS.gene056185:CDS |
| CGCCGCCAAGGAGCTACAAC+AGG | 0.458403 | 8.1:+65684105 | MS.gene056185:CDS |
| CCTGGTGTTGAAAACTTTGG+TGG | 0.460121 | 8.1:+65684565 | MS.gene056185:CDS |
| ACTGCTGTGAACTGTTTCTC+TGG | 0.461299 | 8.1:-65684227 | None:intergenic |
| TGAAAGTTGAGAGGAAAGGA+GGG | 0.461708 | 8.1:+65684434 | MS.gene056185:CDS |
| AGGATTCTCGCTTGGACAAA+GGG | 0.470355 | 8.1:-65684306 | None:intergenic |
| CGGATCACAGGATTCTCGCT+TGG | 0.472811 | 8.1:-65684314 | None:intergenic |
| AAGAATCCCATGATTTGCCT+TGG | 0.478861 | 8.1:-65684277 | None:intergenic |
| ACCTACCGAAGAAGAAATGA+TGG | 0.482196 | 8.1:+65686055 | MS.gene056185:CDS |
| ATGGTTAAAGTTGCAGTGAT+CGG | 0.483813 | 8.1:+65684061 | MS.gene056185:CDS |
| AATGGCTAGCGGCACAGATT+GGG | 0.485605 | 8.1:+65687246 | MS.gene056185:CDS |
| CAGGATTCTCGCTTGGACAA+AGG | 0.488933 | 8.1:-65684307 | None:intergenic |
| GAGAAGAACAACCGCGTTGG+AGG | 0.491903 | 8.1:+65684151 | MS.gene056185:CDS |
| TTGGATGGACAATATGTTGA+TGG | 0.492691 | 8.1:+65687286 | MS.gene056185:CDS |
| GTGAAAGTTGAGAGGAAAGG+AGG | 0.493392 | 8.1:+65684433 | MS.gene056185:CDS |
| ACTATTGAAGGGTATGAAGT+TGG | 0.493692 | 8.1:+65685380 | MS.gene056185:CDS |
| GCTGGTGAGTTTGGGATACA+CGG | 0.497630 | 8.1:+65684385 | MS.gene056185:CDS |
| CTCCTTGGCGGCGATGAGGC+CGG | 0.501222 | 8.1:-65684095 | None:intergenic |
| GGACTGGGTGGTTGAGTCAA+GGG | 0.505732 | 8.1:+65684459 | MS.gene056185:CDS |
| TAAAGACATATATCGCATCT+TGG | 0.506300 | 8.1:+65686085 | MS.gene056185:CDS |
| AGCTGATTCATTCTGAATGA+TGG | 0.509144 | 8.1:-65687369 | None:intergenic |
| TGACTGGGATGATAACTATT+GGG | 0.515543 | 8.1:+65687343 | MS.gene056185:CDS |
| CGAAGCATTTCTTCATGACC+CGG | 0.517432 | 8.1:-65684346 | None:intergenic |
| ATTCCATTAGTTTCCAGGAA+AGG | 0.523441 | 8.1:-65685773 | None:intergenic |
| AGGACTGGGTGGTTGAGTCA+AGG | 0.523829 | 8.1:+65684458 | MS.gene056185:CDS |
| ATGGAATGAGTGTAACGCTT+GGG | 0.523974 | 8.1:-65686122 | None:intergenic |
| AGCCATGGAGCCAGCGAAGG+AGG | 0.524115 | 8.1:-65685845 | None:intergenic |
| AAATACCTGAAACGGACGTA+TGG | 0.525652 | 8.1:-65686141 | None:intergenic |
| AGTTGAGAGGAAAGGAGGGA+AGG | 0.527409 | 8.1:+65684438 | MS.gene056185:CDS |
| GTTCCTGGTGTTGAAAACTT+TGG | 0.527780 | 8.1:+65684562 | MS.gene056185:CDS |
| CTCCGGCCTCATCGCCGCCA+AGG | 0.529871 | 8.1:+65684093 | MS.gene056185:CDS |
| GATGCCATAATTCACTGTAC+AGG | 0.531205 | 8.1:+65685610 | MS.gene056185:CDS |
| TCCTCACTCTTTCAAAGACC+AGG | 0.534154 | 8.1:+65684618 | MS.gene056185:CDS |
| ACAGACGCAAATACCTGAAA+CGG | 0.534676 | 8.1:-65686149 | None:intergenic |
| TTTGAGATGTCAAATGAACT+AGG | 0.538090 | 8.1:-65685306 | None:intergenic |
| TTCCTGTTGTAGCTCCTTGG+CGG | 0.540823 | 8.1:-65684107 | None:intergenic |
| CGATTGAAGATAATCGCGTT+GGG | 0.546471 | 8.1:+65685801 | MS.gene056185:CDS |
| CGGAAACGTTCTCGGATCAC+AGG | 0.547744 | 8.1:-65684326 | None:intergenic |
| TCTCGAAAACGACGACGTTG+TGG | 0.551159 | 8.1:-65684132 | None:intergenic |
| CGGAGGTAGTGAAAGTTGAG+AGG | 0.553936 | 8.1:+65684425 | MS.gene056185:CDS |
| ACAACCGCGTTGGAGGAACC+TGG | 0.554708 | 8.1:+65684158 | MS.gene056185:CDS |
| ATGAAATGTATAGAGATGAC+TGG | 0.555017 | 8.1:+65687327 | MS.gene056185:CDS |
| GTTGTGATCTTAATTGGGCT+AGG | 0.557914 | 8.1:+65685282 | MS.gene056185:CDS |
| ACGATTGAAGATAATCGCGT+TGG | 0.558753 | 8.1:+65685800 | MS.gene056185:CDS |
| TAAAACTCTTGCAACCCACT+TGG | 0.561189 | 8.1:-65686015 | None:intergenic |
| TCCATCATTTCTTCTTCGGT+AGG | 0.562596 | 8.1:-65686056 | None:intergenic |
| AAAGTTGCAGTGATCGGCGC+CGG | 0.565896 | 8.1:+65684067 | MS.gene056185:CDS |
| AGTAGAGAATCCATCTTCAA+AGG | 0.568751 | 8.1:-65685581 | None:intergenic |
| CTTTACGCACAAATCTTCCA+AGG | 0.568859 | 8.1:+65684260 | MS.gene056185:CDS |
| TTCGAGAAGAACAACCGCGT+TGG | 0.570371 | 8.1:+65684148 | MS.gene056185:CDS |
| AAAACCGAATCCACTATTGA+AGG | 0.571520 | 8.1:+65685368 | MS.gene056185:CDS |
| GAGAGCCATGGAGCCAGCGA+AGG | 0.571530 | 8.1:-65685848 | None:intergenic |
| GTAGCTCCTTGGCGGCGATG+AGG | 0.577088 | 8.1:-65684099 | None:intergenic |
| TGGGTGGTTGAGTCAAGGGG+TGG | 0.577761 | 8.1:+65684463 | MS.gene056185:CDS |
| GCCTCCGTTAGAAGATTGGA+TGG | 0.580895 | 8.1:+65687271 | MS.gene056185:CDS |
| GAAAGGAGGGAAGGACTGGG+TGG | 0.585335 | 8.1:+65684447 | MS.gene056185:CDS |
| AATCTTCCAAGGCAAATCAT+GGG | 0.585719 | 8.1:+65684271 | MS.gene056185:CDS |
| AGATATTGCAGGAGTTGCAA+AGG | 0.586378 | 8.1:+65685329 | MS.gene056185:CDS |
| AAACCGAATCCACTATTGAA+GGG | 0.595030 | 8.1:+65685369 | MS.gene056185:CDS |
| CTGGTTGGGTCTATACTAAG+AGG | 0.600004 | 8.1:-65684208 | None:intergenic |
| GCCAAGGAGCTACAACAGGA+AGG | 0.605200 | 8.1:+65684109 | MS.gene056185:CDS |
| GAAGATTTGTGCGTAAAGAG+TGG | 0.607471 | 8.1:-65684255 | None:intergenic |
| TGGGTCTATACTAAGAGGAT+CGG | 0.608316 | 8.1:-65684203 | None:intergenic |
| ATGTGTATATGAAGATGGCT+TGG | 0.608479 | 8.1:+65685555 | MS.gene056185:CDS |
| CGGGTTGACCCGATTTGAAG+CGG | 0.611462 | 8.1:+65684405 | MS.gene056185:CDS |
| CTGGTGAGTTTGGGATACAC+GGG | 0.612264 | 8.1:+65684386 | MS.gene056185:CDS |
| TTGTCCATCCAATCTTCTAA+CGG | 0.613321 | 8.1:-65687275 | None:intergenic |
| GTAGTGAAAGTTGAGAGGAA+AGG | 0.614071 | 8.1:+65684430 | MS.gene056185:CDS |
| CCAGGAACCAAAGCAAGTCT+CGG | 0.614201 | 8.1:-65684547 | None:intergenic |
| TATGGAATGAGTGTAACGCT+TGG | 0.615376 | 8.1:-65686123 | None:intergenic |
| AATTGAGTTACAAGCCAAGT+GGG | 0.620693 | 8.1:+65686001 | MS.gene056185:CDS |
| GGTATGAAGTTGGAAAATGC+TGG | 0.621768 | 8.1:+65685390 | MS.gene056185:CDS |
| GACTGGGTGGTTGAGTCAAG+GGG | 0.623332 | 8.1:+65684460 | MS.gene056185:CDS |
| ATGCCATAATTCACTGTACA+GGG | 0.625503 | 8.1:+65685611 | MS.gene056185:CDS |
| TAGTTTCCAGGAAAGGAATG+TGG | 0.628193 | 8.1:-65685766 | None:intergenic |
| GAGTCAAGAAGTGTTTGAAG+CGG | 0.628510 | 8.1:+65684495 | MS.gene056185:CDS |
| CAATATATGTTTCCATACTG+TGG | 0.630725 | 8.1:+65685413 | MS.gene056185:CDS |
| ACCTGGTCTTTGAAAGAGTG+AGG | 0.636343 | 8.1:-65684619 | None:intergenic |
| AAACCAATGAAAGAGAGCCA+TGG | 0.638563 | 8.1:-65685860 | None:intergenic |
| TGAAATGTATAGAGATGACT+GGG | 0.657076 | 8.1:+65687328 | MS.gene056185:CDS |
| TAATTGAGTTACAAGCCAAG+TGG | 0.658830 | 8.1:+65686000 | MS.gene056185:CDS |
| TCCATCCAATCTTCTAACGG+AGG | 0.663161 | 8.1:-65687272 | None:intergenic |
| AGACATATATCGCATCTTGG+AGG | 0.672722 | 8.1:+65686088 | MS.gene056185:CDS |
| GTTGACCCGATTTGAAGCGG+AGG | 0.673696 | 8.1:+65684408 | MS.gene056185:CDS |
| GTCAGGCTGACTACAAACAA+TGG | 0.679900 | 8.1:+65687228 | MS.gene056185:intron |
| TGACTACAAACAATGGCTAG+CGG | 0.698143 | 8.1:+65687235 | MS.gene056185:CDS |
| ATATCCAGGTTCCTCCAACG+CGG | 0.760535 | 8.1:-65684162 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTAGATTTAGATTT+TGG | + | chr8.1:65684752-65684771 | MS.gene056185:intron | 10.0% |
| !!! | ATTAATTTTCCAAATAAAAT+AGG | - | chr8.1:65685243-65685262 | None:intergenic | 10.0% |
| !!! | ATTTAATAAGTTGAAATTAT+TGG | + | chr8.1:65684681-65684700 | MS.gene056185:intron | 10.0% |
| !!! | ATTTTATTTGGAAAATTAAT+TGG | + | chr8.1:65685243-65685262 | MS.gene056185:intron | 10.0% |
| !! | AATATCTATCATATAAAGTA+TGG | - | chr8.1:65685476-65685495 | None:intergenic | 15.0% |
| !! | ATATAAACTAATATTGTAAC+AGG | + | chr8.1:65685735-65685754 | MS.gene056185:intron | 15.0% |
| !!! | ATTTTCCAAATTTGAAAAAA+TGG | + | chr8.1:65684649-65684668 | MS.gene056185:intron | 15.0% |
| !!! | TAAAACCATTTTTTCAAATT+TGG | - | chr8.1:65684657-65684676 | None:intergenic | 15.0% |
| !! | AATATTGTACAATTTAATCC+AGG | + | chr8.1:65684790-65684809 | MS.gene056185:intron | 20.0% |
| !! | ATTAAATGTGTATATGAAGA+TGG | + | chr8.1:65685550-65685569 | MS.gene056185:CDS | 20.0% |
| !! | TAAAAGAAAAAATACGTTGA+AGG | - | chr8.1:65685663-65685682 | None:intergenic | 20.0% |
| !! | TAATATTACATTAGATGCAA+TGG | + | chr8.1:65686509-65686528 | MS.gene056185:intron | 20.0% |
| !! | TACAAGTAAATAGTTAAACT+CGG | - | chr8.1:65687198-65687217 | None:intergenic | 20.0% |
| !! | TGAACTTAGAGTTAAAAAAA+TGG | + | chr8.1:65686702-65686721 | MS.gene056185:intron | 20.0% |
| !!! | AATCTCTAGATTTTACAAAT+TGG | - | chr8.1:65687099-65687118 | None:intergenic | 20.0% |
| !!! | ATTAAGATGAAGTATTTCAA+TGG | + | chr8.1:65684709-65684728 | MS.gene056185:intron | 20.0% |
| !!! | TGTTTAATGCCTATTTTATT+TGG | + | chr8.1:65685231-65685250 | MS.gene056185:intron | 20.0% |
| ! | AACTCGGAAGAATTTATAAT+CGG | - | chr8.1:65687182-65687201 | None:intergenic | 25.0% |
| ! | AAGAATTTATAATCGGATAC+AGG | - | chr8.1:65687175-65687194 | None:intergenic | 25.0% |
| ! | ATCGTTAAAATTATAAGCAC+CGG | - | chr8.1:65687129-65687148 | None:intergenic | 25.0% |
| ! | TGGAGATATTTATTATGAGA+CGG | - | chr8.1:65685456-65685475 | None:intergenic | 25.0% |
| ! | TTACAATAGAAATAGTTTCC+TGG | - | chr8.1:65685983-65686002 | None:intergenic | 25.0% |
| !! | AGGAGAAAGTTCATTATTTT+TGG | + | chr8.1:65684969-65684988 | MS.gene056185:intron | 25.0% |
| !! | ATTTTTAACATACCACAGTA+TGG | - | chr8.1:65685428-65685447 | None:intergenic | 25.0% |
| !! | CACATCTATATGTTTTCATA+GGG | + | chr8.1:65686573-65686592 | MS.gene056185:intron | 25.0% |
| !! | CTACGAAATTAATCATTTTG+AGG | + | chr8.1:65685711-65685730 | MS.gene056185:intron | 25.0% |
| !! | GGATAATTTTGCTCAATTAA+CGG | + | chr8.1:65686187-65686206 | MS.gene056185:intron | 25.0% |
| !! | TATTTGTGAGTTGAATTTGA+GGG | + | chr8.1:65686413-65686432 | MS.gene056185:intron | 25.0% |
| !! | TCATCTGAAATTGTATGTAA+TGG | + | chr8.1:65686367-65686386 | MS.gene056185:intron | 25.0% |
| !!! | AATTGTGTTTTTGTTTGAGT+CGG | + | chr8.1:65685122-65685141 | MS.gene056185:intron | 25.0% |
| !!! | GTTACTAGAGAATGTTTTAA+AGG | + | chr8.1:65687042-65687061 | MS.gene056185:intron | 25.0% |
| !!! | TCAATTAACGGATTTAAGAT+AGG | + | chr8.1:65686199-65686218 | MS.gene056185:intron | 25.0% |
| !!! | TTATGTCATGTTTTTTCTAG+AGG | + | chr8.1:65686845-65686864 | MS.gene056185:intron | 25.0% |
| AAATTAGTTCCTTATAGAGC+TGG | - | chr8.1:65686814-65686833 | None:intergenic | 30.0% | |
| AATGAACTTTCTCCTATGAA+TGG | - | chr8.1:65684964-65684983 | None:intergenic | 30.0% | |
| ACTAGTACTAACACATTTGT+TGG | + | chr8.1:65684916-65684935 | MS.gene056185:intron | 30.0% | |
| ACTAGTAGAGTCAACAAAAT+TGG | - | chr8.1:65684902-65684921 | None:intergenic | 30.0% | |
| ACTTGTAAAATTACTCTGTC+AGG | + | chr8.1:65687211-65687230 | MS.gene056185:intron | 30.0% | |
| AGACTAAAACGATTAACACA+TGG | - | chr8.1:65684822-65684841 | None:intergenic | 30.0% | |
| AGATTCCATCATTTCTTCTT+CGG | - | chr8.1:65686063-65686082 | None:intergenic | 30.0% | |
| ATGAAATGTATAGAGATGAC+TGG | + | chr8.1:65687327-65687346 | MS.gene056185:CDS | 30.0% | |
| CAATATATGTTTCCATACTG+TGG | + | chr8.1:65685413-65685432 | MS.gene056185:CDS | 30.0% | |
| CAATGGATATTAATGCAAGT+AGG | + | chr8.1:65684726-65684745 | MS.gene056185:intron | 30.0% | |
| CCTATGAAAACATATAGATG+TGG | - | chr8.1:65686575-65686594 | None:intergenic | 30.0% | |
| GGAAAAACATGTTTGTATAG+TGG | - | chr8.1:65685827-65685846 | None:intergenic | 30.0% | |
| GTCTGTTAAAGACATTTCAT+TGG | + | chr8.1:65686166-65686185 | MS.gene056185:intron | 30.0% | |
| TAAAGACATATATCGCATCT+TGG | + | chr8.1:65686085-65686104 | MS.gene056185:CDS | 30.0% | |
| TACAGGTTGTGATCTTAATT+GGG | + | chr8.1:65685277-65685296 | MS.gene056185:intron | 30.0% | |
| TCAAAGATCAAAGTGACTAA+TGG | + | chr8.1:65685080-65685099 | MS.gene056185:intron | 30.0% | |
| TGAAATGTATAGAGATGACT+GGG | + | chr8.1:65687328-65687347 | MS.gene056185:CDS | 30.0% | |
| TGTATTAGAGAAAGACACAT+AGG | + | chr8.1:65684853-65684872 | MS.gene056185:intron | 30.0% | |
| TTGAGCATTTCTCTAAACAA+TGG | + | chr8.1:65686302-65686321 | MS.gene056185:intron | 30.0% | |
| TTTGGAAAATGTAATGTACC+TGG | - | chr8.1:65684639-65684658 | None:intergenic | 30.0% | |
| ! | AAGCATCGTTCAATTGTTAA+AGG | + | chr8.1:65686270-65686289 | MS.gene056185:intron | 30.0% |
| ! | AATGGAGACTTTTCGTTTAT+AGG | + | chr8.1:65686320-65686339 | MS.gene056185:intron | 30.0% |
| ! | AATTGGTAATTACTACCTAC+AGG | + | chr8.1:65685260-65685279 | MS.gene056185:intron | 30.0% |
| ! | ATATGTTTTCATAGGGAACT+AGG | + | chr8.1:65686580-65686599 | MS.gene056185:intron | 30.0% |
| ! | CCACATCTATATGTTTTCAT+AGG | + | chr8.1:65686572-65686591 | MS.gene056185:intron | 30.0% |
| ! | GTATTTGTGAGTTGAATTTG+AGG | + | chr8.1:65686412-65686431 | MS.gene056185:intron | 30.0% |
| ! | TATGTTTTCATAGGGAACTA+GGG | + | chr8.1:65686581-65686600 | MS.gene056185:intron | 30.0% |
| ! | TTACTATTCCATTAGTTTCC+AGG | - | chr8.1:65685781-65685800 | None:intergenic | 30.0% |
| ! | TTTGAGATGTCAAATGAACT+AGG | - | chr8.1:65685309-65685328 | None:intergenic | 30.0% |
| !!! | AATCTAGAGATTGTTTTGAC+CGG | + | chr8.1:65687107-65687126 | MS.gene056185:intron | 30.0% |
| !!! | GTTTTTTCTAGAGGAAGTTT+AGG | + | chr8.1:65686854-65686873 | MS.gene056185:intron | 30.0% |
| !!! | TGAAGAAATGCTTCGTTTTT+TGG | + | chr8.1:65684354-65684373 | MS.gene056185:CDS | 30.0% |
| !!! | TTGAATTTGAGGGTTTTGAA+GGG | + | chr8.1:65686423-65686442 | MS.gene056185:intron | 30.0% |
| AAAACCGAATCCACTATTGA+AGG | + | chr8.1:65685368-65685387 | MS.gene056185:CDS | 35.0% | |
| AAACCGAATCCACTATTGAA+GGG | + | chr8.1:65685369-65685388 | MS.gene056185:CDS | 35.0% | |
| AAATCTTCCAAGGCAAATCA+TGG | + | chr8.1:65684270-65684289 | MS.gene056185:CDS | 35.0% | |
| AACTCACAAATACACCCTAA+GGG | - | chr8.1:65686405-65686424 | None:intergenic | 35.0% | |
| AACTTCATACCCTTCAATAG+TGG | - | chr8.1:65685381-65685400 | None:intergenic | 35.0% | |
| AATCTTCCAAGGCAAATCAT+GGG | + | chr8.1:65684271-65684290 | MS.gene056185:CDS | 35.0% | |
| AATTGAGTTACAAGCCAAGT+GGG | + | chr8.1:65686001-65686020 | MS.gene056185:CDS | 35.0% | |
| AGACTTCTGATGTGTTATCA+GGG | - | chr8.1:65685012-65685031 | None:intergenic | 35.0% | |
| AGTAGAGAATCCATCTTCAA+AGG | - | chr8.1:65685584-65685603 | None:intergenic | 35.0% | |
| ATGACTGGGATGATAACTAT+TGG | + | chr8.1:65687342-65687361 | MS.gene056185:CDS | 35.0% | |
| ATGCCATAATTCACTGTACA+GGG | + | chr8.1:65685611-65685630 | MS.gene056185:CDS | 35.0% | |
| ATGGTTAAAGTTGCAGTGAT+CGG | + | chr8.1:65684061-65684080 | MS.gene056185:CDS | 35.0% | |
| ATGTGTATATGAAGATGGCT+TGG | + | chr8.1:65685555-65685574 | MS.gene056185:CDS | 35.0% | |
| ATTAACACATGGAACAATCC+TGG | - | chr8.1:65684811-65684830 | None:intergenic | 35.0% | |
| ATTAGAGAAAGACACATAGG+CGG | + | chr8.1:65684856-65684875 | MS.gene056185:intron | 35.0% | |
| ATTCCTTTCCTGGAAACTAA+TGG | + | chr8.1:65685770-65685789 | MS.gene056185:CDS | 35.0% | |
| CAATTAAGATCACAACCTGT+AGG | - | chr8.1:65685278-65685297 | None:intergenic | 35.0% | |
| CATCGTTCAATTGTTAAAGG+TGG | + | chr8.1:65686273-65686292 | MS.gene056185:intron | 35.0% | |
| CTACAGGTTGTGATCTTAAT+TGG | + | chr8.1:65685276-65685295 | MS.gene056185:intron | 35.0% | |
| GAACCAACTCGATAATAGTT+CGG | + | chr8.1:65686617-65686636 | MS.gene056185:intron | 35.0% | |
| GACAATTAACTCGTTGAACT+TGG | + | chr8.1:65686650-65686669 | MS.gene056185:intron | 35.0% | |
| GACATCTCAAAAGATATTGC+AGG | + | chr8.1:65685318-65685337 | MS.gene056185:CDS | 35.0% | |
| GACTCTACTAAACCATTCAT+AGG | + | chr8.1:65684949-65684968 | MS.gene056185:intron | 35.0% | |
| TAATTGAGTTACAAGCCAAG+TGG | + | chr8.1:65686000-65686019 | MS.gene056185:CDS | 35.0% | |
| TAGACTTCTGATGTGTTATC+AGG | - | chr8.1:65685013-65685032 | None:intergenic | 35.0% | |
| TGACTCGATAAGAATTGACT+CGG | - | chr8.1:65686757-65686776 | None:intergenic | 35.0% | |
| TGACTGGGATGATAACTATT+GGG | + | chr8.1:65687343-65687362 | MS.gene056185:CDS | 35.0% | |
| TGATGTGACACGTTAATATG+CGG | - | chr8.1:65686997-65687016 | None:intergenic | 35.0% | |
| TTACCCTGTACAGTGAATTA+TGG | - | chr8.1:65685617-65685636 | None:intergenic | 35.0% | |
| TTGGATGGACAATATGTTGA+TGG | + | chr8.1:65687286-65687305 | MS.gene056185:CDS | 35.0% | |
| TTGTCCATCCAATCTTCTAA+CGG | - | chr8.1:65687278-65687297 | None:intergenic | 35.0% | |
| ! | ACTATTGAAGGGTATGAAGT+TGG | + | chr8.1:65685380-65685399 | MS.gene056185:CDS | 35.0% |
| ! | AGCTGATTCATTCTGAATGA+TGG | - | chr8.1:65687372-65687391 | None:intergenic | 35.0% |
| ! | ATTCCATTAGTTTCCAGGAA+AGG | - | chr8.1:65685776-65685795 | None:intergenic | 35.0% |
| ! | TATAGCGCAAACCATCATTT+TGG | - | chr8.1:65685182-65685201 | None:intergenic | 35.0% |
| !! | ATACCCTTCAATAGTGGATT+CGG | - | chr8.1:65685375-65685394 | None:intergenic | 35.0% |
| !! | GAACTATTATCGAGTTGGTT+CGG | - | chr8.1:65686618-65686637 | None:intergenic | 35.0% |
| !! | GTTGAATTTGAGGGTTTTGA+AGG | + | chr8.1:65686422-65686441 | MS.gene056185:intron | 35.0% |
| !! | TAATATTTCTAGACTTGCCG+TGG | + | chr8.1:65685957-65685976 | MS.gene056185:intron | 35.0% |
| !!! | AGAAATGCTTCGTTTTTTGG+AGG | + | chr8.1:65684357-65684376 | MS.gene056185:CDS | 35.0% |
| !!! | TGTTTTTGGAGTGTATATCC+AGG | - | chr8.1:65684179-65684198 | None:intergenic | 35.0% |
| AAACCAATGAAAGAGAGCCA+TGG | - | chr8.1:65685863-65685882 | None:intergenic | 40.0% | |
| AAATACCTGAAACGGACGTA+TGG | - | chr8.1:65686144-65686163 | None:intergenic | 40.0% | |
| ACAGACGCAAATACCTGAAA+CGG | - | chr8.1:65686152-65686171 | None:intergenic | 40.0% | |
| ACCTACCGAAGAAGAAATGA+TGG | + | chr8.1:65686055-65686074 | MS.gene056185:CDS | 40.0% | |
| ACGATTGAAGATAATCGCGT+TGG | + | chr8.1:65685800-65685819 | MS.gene056185:CDS | 40.0% | |
| ACTTCCAGAGACCAAAATGA+TGG | + | chr8.1:65685168-65685187 | MS.gene056185:intron | 40.0% | |
| AGACATATATCGCATCTTGG+AGG | + | chr8.1:65686088-65686107 | MS.gene056185:CDS | 40.0% | |
| AGATATTGCAGGAGTTGCAA+AGG | + | chr8.1:65685329-65685348 | MS.gene056185:CDS | 40.0% | |
| ATGGAATGAGTGTAACGCTT+GGG | - | chr8.1:65686125-65686144 | None:intergenic | 40.0% | |
| CAAATACCACATTCCTTTCC+TGG | + | chr8.1:65685760-65685779 | MS.gene056185:CDS | 40.0% | |
| CAACTCACAAATACACCCTA+AGG | - | chr8.1:65686406-65686425 | None:intergenic | 40.0% | |
| CAATGGCATTGCACATGTAT+TGG | + | chr8.1:65686526-65686545 | MS.gene056185:intron | 40.0% | |
| CGATTGAAGATAATCGCGTT+GGG | + | chr8.1:65685801-65685820 | MS.gene056185:CDS | 40.0% | |
| CGTTGAAGGTGAGAAAATGT+TGG | - | chr8.1:65685649-65685668 | None:intergenic | 40.0% | |
| CTTTACGCACAAATCTTCCA+AGG | + | chr8.1:65684260-65684279 | MS.gene056185:CDS | 40.0% | |
| GAAGATTTGTGCGTAAAGAG+TGG | - | chr8.1:65684258-65684277 | None:intergenic | 40.0% | |
| GACTCATTTCCAGCTCTATA+AGG | + | chr8.1:65686802-65686821 | MS.gene056185:intron | 40.0% | |
| GATGCCATAATTCACTGTAC+AGG | + | chr8.1:65685610-65685629 | MS.gene056185:CDS | 40.0% | |
| GGTATGAAGTTGGAAAATGC+TGG | + | chr8.1:65685390-65685409 | MS.gene056185:CDS | 40.0% | |
| GGTCAAAATAGAGTCCCTTA+GGG | + | chr8.1:65686388-65686407 | MS.gene056185:intron | 40.0% | |
| GTAGTGAAAGTTGAGAGGAA+AGG | + | chr8.1:65684430-65684449 | MS.gene056185:CDS | 40.0% | |
| GTTCCGAACTATTATCGAGT+TGG | - | chr8.1:65686623-65686642 | None:intergenic | 40.0% | |
| GTTGTGATCTTAATTGGGCT+AGG | + | chr8.1:65685282-65685301 | MS.gene056185:CDS | 40.0% | |
| TAAAACTCTTGCAACCCACT+TGG | - | chr8.1:65686018-65686037 | None:intergenic | 40.0% | |
| TAGAAATAGTTTCCTGGCCA+CGG | - | chr8.1:65685977-65685996 | None:intergenic | 40.0% | |
| TAGTTTCCAGGAAAGGAATG+TGG | - | chr8.1:65685769-65685788 | None:intergenic | 40.0% | |
| TATGGAATGAGTGTAACGCT+TGG | - | chr8.1:65686126-65686145 | None:intergenic | 40.0% | |
| TCCATCATTTCTTCTTCGGT+AGG | - | chr8.1:65686059-65686078 | None:intergenic | 40.0% | |
| TGAAAGTTGAGAGGAAAGGA+GGG | + | chr8.1:65684434-65684453 | MS.gene056185:CDS | 40.0% | |
| TGACTACAAACAATGGCTAG+CGG | + | chr8.1:65687235-65687254 | MS.gene056185:CDS | 40.0% | |
| TGGGTCTATACTAAGAGGAT+CGG | - | chr8.1:65684206-65684225 | None:intergenic | 40.0% | |
| TGGTCAAAATAGAGTCCCTT+AGG | + | chr8.1:65686387-65686406 | MS.gene056185:intron | 40.0% | |
| ! | AAGAATCCCATGATTTGCCT+TGG | - | chr8.1:65684280-65684299 | None:intergenic | 40.0% |
| ! | AGGATTTTGCTGGTGAGTTT+GGG | + | chr8.1:65684377-65684396 | MS.gene056185:CDS | 40.0% |
| ! | CAGTTCAAGTTCAGCTCATT+TGG | - | chr8.1:65686684-65686703 | None:intergenic | 40.0% |
| ! | GTTCCTGGTGTTGAAAACTT+TGG | + | chr8.1:65684562-65684581 | MS.gene056185:CDS | 40.0% |
| ! | TGTGAACTGTTTCTCTGGTT+GGG | - | chr8.1:65684225-65684244 | None:intergenic | 40.0% |
| !! | CAAACCATCATTTTGGTCTC+TGG | - | chr8.1:65685175-65685194 | None:intergenic | 40.0% |
| !! | GAGTCAAGAAGTGTTTGAAG+CGG | + | chr8.1:65684495-65684514 | MS.gene056185:CDS | 40.0% |
| !! | TGGGTTGCAAGAGTTTTATC+TGG | + | chr8.1:65686020-65686039 | MS.gene056185:CDS | 40.0% |
| !! | TGTGTGTTCAGGTCATTTTG+TGG | + | chr8.1:65684522-65684541 | MS.gene056185:CDS | 40.0% |
| !!! | CGTTTTTTGGAGGATTTTGC+TGG | + | chr8.1:65684367-65684386 | MS.gene056185:CDS | 40.0% |
| AGGATTCTCGCTTGGACAAA+GGG | - | chr8.1:65684309-65684328 | None:intergenic | 45.0% | |
| CTGGTTGGGTCTATACTAAG+AGG | - | chr8.1:65684211-65684230 | None:intergenic | 45.0% | |
| GAAGCGGTTATTGTGTGTTC+AGG | + | chr8.1:65684511-65684530 | MS.gene056185:CDS | 45.0% | |
| GACGACGTGTACTAATGAGA+AGG | - | chr8.1:65685041-65685060 | None:intergenic | 45.0% | |
| GTCAGGCTGACTACAAACAA+TGG | + | chr8.1:65687228-65687247 | MS.gene056185:intron | 45.0% | |
| GTGAAAGTTGAGAGGAAAGG+AGG | + | chr8.1:65684433-65684452 | MS.gene056185:CDS | 45.0% | |
| TCACTACCTCCGCTTCAAAT+CGG | - | chr8.1:65684417-65684436 | None:intergenic | 45.0% | |
| TCATTCCATACGTCCGTTTC+AGG | + | chr8.1:65686136-65686155 | MS.gene056185:CDS | 45.0% | |
| TCCATCCAATCTTCTAACGG+AGG | - | chr8.1:65687275-65687294 | None:intergenic | 45.0% | |
| TCCTCACTCTTTCAAAGACC+AGG | + | chr8.1:65684618-65684637 | MS.gene056185:CDS | 45.0% | |
| ! | ACATGTTTTTCCTCCTTCGC+TGG | + | chr8.1:65685835-65685854 | MS.gene056185:CDS | 45.0% |
| ! | ACCTGGTCTTTGAAAGAGTG+AGG | - | chr8.1:65684622-65684641 | None:intergenic | 45.0% |
| ! | ACTGCTGTGAACTGTTTCTC+TGG | - | chr8.1:65684230-65684249 | None:intergenic | 45.0% |
| ! | AGAGGATCGGAGTCTGTTTT+TGG | - | chr8.1:65684193-65684212 | None:intergenic | 45.0% |
| ! | CCACCAAAGTTTTCAACACC+AGG | - | chr8.1:65684568-65684587 | None:intergenic | 45.0% |
| ! | CCTGGTGTTGAAAACTTTGG+TGG | + | chr8.1:65684565-65684584 | MS.gene056185:CDS | 45.0% |
| ! | CGAAGCATTTCTTCATGACC+CGG | - | chr8.1:65684349-65684368 | None:intergenic | 45.0% |
| ! | CTGTGAACTGTTTCTCTGGT+TGG | - | chr8.1:65684226-65684245 | None:intergenic | 45.0% |
| ! | GAGGATTTTGCTGGTGAGTT+TGG | + | chr8.1:65684376-65684395 | MS.gene056185:CDS | 45.0% |
| AATGGCTAGCGGCACAGATT+GGG | + | chr8.1:65687246-65687265 | MS.gene056185:CDS | 50.0% | |
| AGTTGAGAGGAAAGGAGGGA+AGG | + | chr8.1:65684438-65684457 | MS.gene056185:CDS | 50.0% | |
| ATATCCAGGTTCCTCCAACG+CGG | - | chr8.1:65684165-65684184 | None:intergenic | 50.0% | |
| CACTACCTCCGCTTCAAATC+GGG | - | chr8.1:65684416-65684435 | None:intergenic | 50.0% | |
| CAGGATTCTCGCTTGGACAA+AGG | - | chr8.1:65684310-65684329 | None:intergenic | 50.0% | |
| CCAGGAACCAAAGCAAGTCT+CGG | - | chr8.1:65684550-65684569 | None:intergenic | 50.0% | |
| CGGAGGTAGTGAAAGTTGAG+AGG | + | chr8.1:65684425-65684444 | MS.gene056185:CDS | 50.0% | |
| CTGTGATCCGAGAACGTTTC+CGG | + | chr8.1:65684327-65684346 | MS.gene056185:CDS | 50.0% | |
| GCCTCCGTTAGAAGATTGGA+TGG | + | chr8.1:65687271-65687290 | MS.gene056185:CDS | 50.0% | |
| GCTCCATGGCTCTCTTTCAT+TGG | + | chr8.1:65685857-65685876 | MS.gene056185:CDS | 50.0% | |
| GGTTGCCTCCGTTAGAAGAT+TGG | + | chr8.1:65687267-65687286 | MS.gene056185:CDS | 50.0% | |
| TCATGACCCGGAAACGTTCT+CGG | - | chr8.1:65684337-65684356 | None:intergenic | 50.0% | |
| TCTCGAAAACGACGACGTTG+TGG | - | chr8.1:65684135-65684154 | None:intergenic | 50.0% | |
| TGTGATCCGAGAACGTTTCC+GGG | + | chr8.1:65684328-65684347 | MS.gene056185:CDS | 50.0% | |
| TTCCTGTTGTAGCTCCTTGG+CGG | - | chr8.1:65684110-65684129 | None:intergenic | 50.0% | |
| TTCGAGAAGAACAACCGCGT+TGG | + | chr8.1:65684148-65684167 | MS.gene056185:CDS | 50.0% | |
| ! | CTGGTGAGTTTGGGATACAC+GGG | + | chr8.1:65684386-65684405 | MS.gene056185:CDS | 50.0% |
| ! | GCGGTTGATGTGTGTTCTCA+TGG | + | chr8.1:65684875-65684894 | MS.gene056185:intron | 50.0% |
| ! | GCTGGTGAGTTTGGGATACA+CGG | + | chr8.1:65684385-65684404 | MS.gene056185:CDS | 50.0% |
| ! | GGCTTGGTTGCCTTTGAAGA+TGG | + | chr8.1:65685571-65685590 | MS.gene056185:CDS | 50.0% |
| ! | TGTGGAACCGAGACTTGCTT+TGG | + | chr8.1:65684540-65684559 | MS.gene056185:CDS | 50.0% |
| AAAGTTGCAGTGATCGGCGC+CGG | + | chr8.1:65684067-65684086 | MS.gene056185:CDS | 55.0% | |
| AGAGGAAAGGAGGGAAGGAC+TGG | + | chr8.1:65684443-65684462 | MS.gene056185:CDS | 55.0% | |
| AGGACTGGGTGGTTGAGTCA+AGG | + | chr8.1:65684458-65684477 | MS.gene056185:CDS | 55.0% | |
| CAATGGCTAGCGGCACAGAT+TGG | + | chr8.1:65687245-65687264 | MS.gene056185:CDS | 55.0% | |
| CGGAAACGTTCTCGGATCAC+AGG | - | chr8.1:65684329-65684348 | None:intergenic | 55.0% | |
| CGGATCACAGGATTCTCGCT+TGG | - | chr8.1:65684317-65684336 | None:intergenic | 55.0% | |
| GACTGGGTGGTTGAGTCAAG+GGG | + | chr8.1:65684460-65684479 | MS.gene056185:CDS | 55.0% | |
| GAGAAGAACAACCGCGTTGG+AGG | + | chr8.1:65684151-65684170 | MS.gene056185:CDS | 55.0% | |
| GAGGAAAGGAGGGAAGGACT+GGG | + | chr8.1:65684444-65684463 | MS.gene056185:CDS | 55.0% | |
| GAGTCGAACTCGTCTGAGCT+CGG | - | chr8.1:65686782-65686801 | None:intergenic | 55.0% | |
| GCCAAGGAGCTACAACAGGA+AGG | + | chr8.1:65684109-65684128 | MS.gene056185:CDS | 55.0% | |
| GCCTTCCTGTTGTAGCTCCT+TGG | - | chr8.1:65684113-65684132 | None:intergenic | 55.0% | |
| GGACTGGGTGGTTGAGTCAA+GGG | + | chr8.1:65684459-65684478 | MS.gene056185:CDS | 55.0% | |
| TTTCTAGACTTGCCGTGGCC+AGG | + | chr8.1:65685962-65685981 | MS.gene056185:intron | 55.0% | |
| ! | CCGAGACTTGCTTTGGTTCC+TGG | + | chr8.1:65684547-65684566 | MS.gene056185:CDS | 55.0% |
| ! | CGGGTTGACCCGATTTGAAG+CGG | + | chr8.1:65684405-65684424 | MS.gene056185:CDS | 55.0% |
| ! | GTTGACCCGATTTGAAGCGG+AGG | + | chr8.1:65684408-65684427 | MS.gene056185:CDS | 55.0% |
| ACAACCGCGTTGGAGGAACC+TGG | + | chr8.1:65684158-65684177 | MS.gene056185:CDS | 60.0% | |
| GAAAGGAGGGAAGGACTGGG+TGG | + | chr8.1:65684447-65684466 | MS.gene056185:CDS | 60.0% | |
| TGGGTGGTTGAGTCAAGGGG+TGG | + | chr8.1:65684463-65684482 | MS.gene056185:CDS | 60.0% | |
| !! | TTCCTCCTTCGCTGGCTCCA+TGG | + | chr8.1:65685843-65685862 | MS.gene056185:CDS | 60.0% |
| AGCCATGGAGCCAGCGAAGG+AGG | - | chr8.1:65685848-65685867 | None:intergenic | 65.0% | |
| CGCCGCCAAGGAGCTACAAC+AGG | + | chr8.1:65684105-65684124 | MS.gene056185:CDS | 65.0% | |
| GAGAGCCATGGAGCCAGCGA+AGG | - | chr8.1:65685851-65685870 | None:intergenic | 65.0% | |
| GTAGCTCCTTGGCGGCGATG+AGG | - | chr8.1:65684102-65684121 | None:intergenic | 65.0% | |
| CTCCTTGGCGGCGATGAGGC+CGG | - | chr8.1:65684098-65684117 | None:intergenic | 70.0% | |
| GGCGATGAGGCCGGAGACTC+CGG | - | chr8.1:65684089-65684108 | None:intergenic | 70.0% | |
| ! | GTGATCGGCGCCGGAGTCTC+CGG | + | chr8.1:65684076-65684095 | MS.gene056185:CDS | 70.0% |
| CTCCGGCCTCATCGCCGCCA+AGG | + | chr8.1:65684093-65684112 | MS.gene056185:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 65684061 | 65687397 | 65684061 | ID=MS.gene056185 |
| chr8.1 | mRNA | 65684061 | 65687397 | 65684061 | ID=MS.gene056185.t1;Parent=MS.gene056185 |
| chr8.1 | exon | 65684061 | 65684639 | 65684061 | ID=MS.gene056185.t1.exon1;Parent=MS.gene056185.t1 |
| chr8.1 | CDS | 65684061 | 65684639 | 65684061 | ID=cds.MS.gene056185.t1;Parent=MS.gene056185.t1 |
| chr8.1 | exon | 65685282 | 65685434 | 65685282 | ID=MS.gene056185.t1.exon2;Parent=MS.gene056185.t1 |
| chr8.1 | CDS | 65685282 | 65685434 | 65685282 | ID=cds.MS.gene056185.t1;Parent=MS.gene056185.t1 |
| chr8.1 | exon | 65685550 | 65685632 | 65685550 | ID=MS.gene056185.t1.exon3;Parent=MS.gene056185.t1 |
| chr8.1 | CDS | 65685550 | 65685632 | 65685550 | ID=cds.MS.gene056185.t1;Parent=MS.gene056185.t1 |
| chr8.1 | exon | 65685757 | 65685892 | 65685757 | ID=MS.gene056185.t1.exon4;Parent=MS.gene056185.t1 |
| chr8.1 | CDS | 65685757 | 65685892 | 65685757 | ID=cds.MS.gene056185.t1;Parent=MS.gene056185.t1 |
| chr8.1 | exon | 65685984 | 65686157 | 65685984 | ID=MS.gene056185.t1.exon5;Parent=MS.gene056185.t1 |
| chr8.1 | CDS | 65685984 | 65686157 | 65685984 | ID=cds.MS.gene056185.t1;Parent=MS.gene056185.t1 |
| chr8.1 | exon | 65687233 | 65687397 | 65687233 | ID=MS.gene056185.t1.exon6;Parent=MS.gene056185.t1 |
| chr8.1 | CDS | 65687233 | 65687397 | 65687233 | ID=cds.MS.gene056185.t1;Parent=MS.gene056185.t1 |
| Gene Sequence |
| Protein sequence |
