AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072526

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072526.t1 MTR_7g112580 99.265 544 4 0 1 544 1 544 0.0 1132
MS.gene072526.t1 MTR_4g087980 47.581 496 223 8 68 542 37 516 8.84e-159 463
MS.gene072526.t1 MTR_2g044880 47.699 478 222 8 80 542 61 525 2.63e-158 462
MS.gene072526.t1 MTR_3g091380 45.920 527 256 10 40 543 78 598 8.77e-156 458
MS.gene072526.t1 MTR_7g108905 41.187 556 304 8 1 543 12 557 2.81e-150 442
MS.gene072526.t1 MTR_1g008140 48.319 476 208 9 99 543 140 608 2.75e-149 442
MS.gene072526.t1 MTR_4g087970 43.912 501 246 10 64 543 32 518 1.49e-143 424
MS.gene072526.t1 MTR_4g025730 49.666 449 188 10 102 542 91 509 6.32e-143 422
MS.gene072526.t1 MTR_4g025690 49.339 454 189 10 100 542 90 513 2.64e-138 410
MS.gene072526.t1 MTR_8g042900 41.571 522 282 7 34 542 70 581 1.14e-136 409
MS.gene072526.t1 MTR_8g104655 45.070 497 235 10 68 542 61 541 5.02e-136 405
MS.gene072526.t1 MTR_3g010780 43.121 487 240 6 73 542 108 574 1.77e-135 405
MS.gene072526.t1 MTR_1g083520 44.304 474 230 8 89 542 69 528 5.37e-135 402
MS.gene072526.t1 MTR_7g050980 45.275 455 218 8 102 542 118 555 4.47e-133 398
MS.gene072526.t1 MTR_8g023310 44.111 467 234 6 98 542 128 589 5.31e-133 399
MS.gene072526.t1 MTR_7g050870 41.651 521 261 13 44 542 55 554 3.12e-131 394
MS.gene072526.t1 MTR_1g054880 44.731 465 227 8 106 542 96 558 7.65e-130 390
MS.gene072526.t1 MTR_2g044810 42.017 476 249 8 76 542 77 534 1.40e-129 389
MS.gene072526.t1 MTR_4g025670 43.827 486 224 11 78 542 32 489 5.03e-129 385
MS.gene072526.t1 MTR_1g088020 44.325 467 228 8 106 542 91 555 6.43e-128 385
MS.gene072526.t1 MTR_8g104645 53.846 338 143 3 218 542 35 372 3.97e-127 377
MS.gene072526.t1 MTR_7g050950 42.035 521 258 16 44 542 55 553 9.25e-126 379
MS.gene072526.t1 MTR_4g124520 43.590 429 217 6 127 542 105 521 2.98e-125 377
MS.gene072526.t1 MTR_3g010770 42.213 488 241 7 95 544 93 577 5.12e-125 379
MS.gene072526.t1 MTR_8g042910 43.182 484 230 10 98 542 135 612 3.72e-124 377
MS.gene072526.t1 MTR_7g108875 44.421 466 228 9 106 542 101 564 9.36e-124 375
MS.gene072526.t1 MTR_1g088225 43.683 467 229 9 106 542 91 553 5.85e-122 370
MS.gene072526.t1 MTR_7g053360 44.270 445 218 8 109 542 102 527 2.60e-121 367
MS.gene072526.t1 MTR_3g008640 47.433 409 189 7 145 542 134 527 5.53e-121 366
MS.gene072526.t1 MTR_8g023150 42.209 507 272 8 44 538 81 578 8.00e-121 368
MS.gene072526.t1 MTR_3g008720 47.188 409 190 7 145 542 134 527 5.68e-120 364
MS.gene072526.t1 MTR_3g033690 47.073 410 189 8 145 542 133 526 7.37e-120 363
MS.gene072526.t1 MTR_1g086190 38.230 531 287 13 40 543 48 564 1.53e-119 364
MS.gene072526.t1 MTR_4g035980 43.860 456 230 9 99 542 98 539 2.08e-119 363
MS.gene072526.t1 MTR_3g008700 46.472 411 194 7 143 542 132 527 2.31e-119 362
MS.gene072526.t1 MTR_7g108890 44.037 436 198 9 144 542 136 562 1.31e-117 359
MS.gene072526.t1 MTR_1g083490 35.888 535 317 10 23 538 44 571 4.70e-114 350
MS.gene072526.t1 MTR_1g083470 34.177 553 341 10 3 538 20 566 4.83e-114 350
MS.gene072526.t1 MTR_1g083500 34.177 553 341 10 3 538 20 566 4.83e-114 350
MS.gene072526.t1 MTR_1g083510 35.271 499 292 7 72 541 86 582 6.98e-114 350
MS.gene072526.t1 MTR_7g108900 41.614 471 238 11 106 543 95 561 1.13e-113 349
MS.gene072526.t1 MTR_1g086210 36.961 533 294 11 44 542 45 569 1.75e-113 348
MS.gene072526.t1 MTR_7g112590 37.302 504 284 9 69 544 86 585 1.03e-112 347
MS.gene072526.t1 MTR_4g005180 36.719 512 300 9 44 538 49 553 3.09e-112 345
MS.gene072526.t1 MTR_4g005170 36.914 512 299 9 44 538 67 571 3.66e-112 347
MS.gene072526.t1 MTR_4g124550 38.618 492 275 10 69 542 111 593 3.50e-110 341
MS.gene072526.t1 MTR_0458s0030 56.786 280 107 3 272 542 40 314 1.44e-109 330
MS.gene072526.t1 MTR_1g088040 56.786 280 107 3 272 542 40 314 1.44e-109 330
MS.gene072526.t1 MTR_2g044660 36.796 568 286 13 39 544 78 634 8.54e-109 338
MS.gene072526.t1 MTR_8g104580 40.040 497 227 12 68 542 53 500 2.45e-107 330
MS.gene072526.t1 MTR_2g436040 34.429 517 298 10 44 539 47 543 1.40e-105 329
MS.gene072526.t1 MTR_7g110560 34.035 570 319 16 3 542 7 549 3.02e-104 324
MS.gene072526.t1 MTR_4g120280 33.966 527 315 10 37 541 56 571 3.49e-102 320
MS.gene072526.t1 MTR_4g120290 32.836 536 331 8 26 541 45 571 2.47e-101 317
MS.gene072526.t1 MTR_7g110440 33.945 545 318 10 30 542 32 566 1.07e-98 310
MS.gene072526.t1 MTR_2g436050 33.397 521 321 9 37 541 53 563 1.11e-98 310
MS.gene072526.t1 MTR_3g095920 33.391 578 313 13 1 541 21 563 3.72e-97 306
MS.gene072526.t1 MTR_7g110490 35.110 544 315 11 30 543 32 567 1.32e-96 305
MS.gene072526.t1 MTR_7g110510 35.110 544 315 11 30 543 32 567 1.32e-96 305
MS.gene072526.t1 MTR_8g093460 33.979 568 321 13 7 544 10 553 8.37e-95 300
MS.gene072526.t1 MTR_2g044810 52.590 251 109 2 301 542 216 465 1.37e-92 291
MS.gene072526.t1 MTR_0618s0020 54.185 227 95 1 325 542 2 228 2.81e-85 264
MS.gene072526.t1 MTR_7g110420 33.880 549 311 14 30 537 32 569 5.90e-82 267
MS.gene072526.t1 MTR_7g110430 32.402 537 303 10 30 542 32 532 1.75e-81 265
MS.gene072526.t1 MTR_8g088610 40.774 336 178 7 218 539 45 373 2.09e-80 256
MS.gene072526.t1 MTR_2g105560 41.639 305 156 4 247 542 48 339 2.88e-75 242
MS.gene072526.t1 MTR_5g083620 36.873 339 194 6 219 542 23 356 8.10e-74 239
MS.gene072526.t1 MTR_0458s0010 34.423 459 248 11 106 542 91 518 1.87e-72 240
MS.gene072526.t1 MTR_7g107180 41.158 311 162 5 242 542 8 307 2.28e-71 231
MS.gene072526.t1 MTR_7g111560 32.692 520 304 15 43 542 63 556 3.99e-70 235
MS.gene072526.t1 MTR_6g024165 36.778 329 178 8 216 533 27 336 2.71e-58 197
MS.gene072526.t1 MTR_6g088810 33.333 381 227 11 172 531 3 377 4.82e-57 195
MS.gene072526.t1 MTR_1g086540 36.213 301 172 6 243 531 52 344 1.18e-56 193
MS.gene072526.t1 MTR_6g012800 37.413 286 159 5 243 515 8 286 2.21e-55 189
MS.gene072526.t1 MTR_2g039530 40.594 303 157 10 217 509 30 319 5.26e-55 189
MS.gene072526.t1 MTR_8g102380 35.473 296 172 5 249 531 88 377 1.77e-52 183
MS.gene072526.t1 MTR_7g011530 34.545 275 162 3 243 504 8 277 1.33e-48 171
MS.gene072526.t1 MTR_7g102600 33.446 296 187 4 243 531 101 393 1.98e-48 173
MS.gene072526.t1 MTR_7g092780 32.542 295 186 5 247 531 96 387 3.25e-47 169
MS.gene072526.t1 MTR_6g042660 34.601 263 158 5 247 504 43 296 4.68e-47 167
MS.gene072526.t1 MTR_5g093970 33.677 291 187 4 242 531 44 329 4.63e-46 165
MS.gene072526.t1 MTR_5g012600 32.915 319 192 7 232 534 50 362 1.93e-45 164
MS.gene072526.t1 MTR_6g042690 34.432 273 160 5 242 504 40 303 2.67e-45 162
MS.gene072526.t1 MTR_8g102380 36.667 240 136 3 249 475 88 324 3.84e-44 159
MS.gene072526.t1 MTR_5g095490 32.323 297 183 5 247 531 67 357 1.39e-43 159
MS.gene072526.t1 MTR_1g033050 33.684 285 173 6 232 504 4 284 4.86e-43 156
MS.gene072526.t1 MTR_4g124740 32.890 301 173 9 243 531 56 339 1.40e-41 153
MS.gene072526.t1 MTR_2g033970 29.097 299 194 6 243 532 58 347 4.15e-41 152
MS.gene072526.t1 MTR_5g083590 29.206 315 163 6 238 542 4 268 3.34e-40 147
MS.gene072526.t1 MTR_5g088300 31.633 294 182 5 242 531 38 316 1.08e-36 139
MS.gene072526.t1 MTR_2g436600 27.703 296 193 8 243 532 57 337 2.51e-36 138
MS.gene072526.t1 MTR_4g074290 29.618 314 203 7 226 531 58 361 4.51e-35 135
MS.gene072526.t1 MTR_2g073390 28.889 315 204 8 226 531 58 361 2.79e-34 133
MS.gene072526.t1 MTR_8g036225 30.147 272 172 5 243 504 35 298 1.02e-32 128
MS.gene072526.t1 MTR_5g088290 30.556 288 190 3 242 526 49 329 2.05e-32 127
MS.gene072526.t1 MTR_4g051810 29.866 298 197 5 236 531 30 317 6.21e-32 125
MS.gene072526.t1 MTR_5g088280 29.965 287 190 4 242 525 40 318 3.62e-31 124
MS.gene072526.t1 MTR_0009s0350 28.014 282 192 5 226 501 58 334 4.17e-31 124
MS.gene072526.t1 MTR_0009s0340 28.014 282 192 5 226 501 58 334 4.17e-31 124
MS.gene072526.t1 MTR_2g436070 26.349 315 218 7 2 312 17 321 1.18e-30 123
MS.gene072526.t1 MTR_6g025590 30.653 199 119 4 210 400 29 216 6.92e-27 109
MS.gene072526.t1 MTR_0408s0030 43.182 88 50 0 417 504 36 123 5.49e-21 90.1
MS.gene072526.t1 MTR_6g024200 33.537 164 96 4 369 531 125 276 3.83e-18 85.1
MS.gene072526.t1 MTR_7g108790 30.128 156 106 3 40 194 34 187 3.03e-17 80.5
MS.gene072526.t1 MTR_4g035870 39.216 102 53 3 99 195 96 193 6.76e-15 73.9
MS.gene072526.t1 MTR_4g035880 39.604 101 52 3 99 194 96 192 6.89e-15 73.9
MS.gene072526.t1 MTR_7g102580 45.349 86 37 2 315 395 73 153 1.31e-14 72.0
MS.gene072526.t1 MTR_4g130790 27.854 219 137 8 264 473 48 254 2.83e-14 73.6
MS.gene072526.t1 MTR_4g035905 38.182 110 55 4 94 194 87 192 2.16e-13 69.3
MS.gene072526.t1 MTR_1g088540 29.921 127 87 2 69 194 15 140 4.69e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072526.t1 AT3G05620 62.157 547 186 6 9 544 7 543 0.0 699
MS.gene072526.t1 AT4G33220 50.612 490 213 6 79 542 37 523 8.51e-171 494
MS.gene072526.t1 AT3G43270 49.582 478 228 5 76 542 50 525 3.74e-167 484
MS.gene072526.t1 AT4G33220 53.086 405 166 4 159 542 1 402 9.26e-152 441
MS.gene072526.t1 AT5G53370 46.217 489 238 7 72 543 106 586 6.75e-151 445
MS.gene072526.t1 AT5G53370 46.217 489 238 7 72 543 142 622 2.50e-150 445
MS.gene072526.t1 AT3G49220 43.954 521 265 6 40 543 87 597 1.57e-147 437
MS.gene072526.t1 AT3G49220 43.954 521 265 6 40 543 132 642 8.02e-147 437
MS.gene072526.t1 AT2G45220 43.063 555 253 16 2 542 6 511 3.60e-137 407
MS.gene072526.t1 AT1G23200 47.346 471 211 8 98 542 95 554 1.34e-136 407
MS.gene072526.t1 AT1G11580 44.420 448 226 5 102 538 118 553 4.00e-132 396
MS.gene072526.t1 AT4G02300 41.767 498 258 8 62 542 50 532 5.15e-132 395
MS.gene072526.t1 AT1G11580 44.420 448 226 5 102 538 139 574 9.13e-132 396
MS.gene072526.t1 AT3G05610 39.394 528 275 11 40 542 58 565 4.32e-131 397
MS.gene072526.t1 AT5G27870 37.838 518 295 6 40 542 57 562 1.02e-129 395
MS.gene072526.t1 AT2G26440 41.085 516 278 9 44 542 41 547 1.58e-128 386
MS.gene072526.t1 AT1G53830 44.731 465 231 6 102 542 125 587 2.09e-128 387
MS.gene072526.t1 AT2G43050 43.813 493 241 10 63 544 51 518 7.72e-128 384
MS.gene072526.t1 AT4G02320 40.400 500 250 7 73 542 37 518 1.46e-127 383
MS.gene072526.t1 AT3G10710 43.802 484 244 10 68 542 97 561 2.16e-127 384
MS.gene072526.t1 AT3G14310 42.283 473 239 5 102 542 122 592 4.92e-126 382
MS.gene072526.t1 AT3G60730 41.988 493 247 7 78 542 38 519 1.15e-125 378
MS.gene072526.t1 AT5G51490 43.035 481 244 10 77 542 71 536 4.87e-124 375
MS.gene072526.t1 AT4G00190 44.843 446 202 8 106 542 64 474 3.95e-123 370
MS.gene072526.t1 AT4G02330 42.259 478 233 9 106 542 96 571 3.91e-122 371
MS.gene072526.t1 AT3G47400 39.227 543 290 10 24 542 68 594 1.71e-120 367
MS.gene072526.t1 AT3G59010 43.607 438 234 6 107 542 102 528 3.32e-119 362
MS.gene072526.t1 AT5G04960 40.787 483 261 7 68 540 95 562 3.36e-118 360
MS.gene072526.t1 AT5G51500 41.164 481 253 10 77 542 75 540 1.05e-117 358
MS.gene072526.t1 AT5G04970 43.396 477 226 12 103 542 151 620 9.70e-117 358
MS.gene072526.t1 AT4G33230 38.302 530 300 12 31 542 86 606 1.96e-116 357
MS.gene072526.t1 AT1G02810 40.562 498 223 8 106 542 92 577 1.02e-115 355
MS.gene072526.t1 AT3G10720 41.632 478 243 11 98 542 141 615 1.48e-115 355
MS.gene072526.t1 AT1G53840 39.010 505 280 11 52 536 85 581 5.25e-115 353
MS.gene072526.t1 AT5G49180 36.932 528 306 11 31 538 46 566 1.13e-114 352
MS.gene072526.t1 AT2G47550 44.304 474 213 14 106 542 99 558 1.38e-114 351
MS.gene072526.t1 AT2G26450 40.246 487 266 12 68 542 138 611 2.14e-114 352
MS.gene072526.t1 AT5G20860 40.133 451 232 10 108 542 110 538 2.57e-105 327
MS.gene072526.t1 AT4G03930 42.446 417 209 8 140 542 125 524 1.02e-104 324
MS.gene072526.t1 AT3G06830 35.472 530 299 12 40 540 51 566 1.21e-104 325
MS.gene072526.t1 AT1G11590 42.271 414 214 6 140 542 125 524 1.51e-102 319
MS.gene072526.t1 AT3G10720 55.769 260 105 3 292 542 1 259 4.89e-102 308
MS.gene072526.t1 AT3G14300 36.821 497 292 8 52 533 471 960 6.22e-102 329
MS.gene072526.t1 AT3G27980 40.494 405 217 5 147 542 108 497 3.71e-98 306
MS.gene072526.t1 AT4G15980 44.380 347 180 4 206 540 355 700 5.34e-92 296
MS.gene072526.t1 AT4G15980 44.380 347 180 4 206 540 365 710 9.47e-92 296
MS.gene072526.t1 AT5G09760 36.090 532 277 17 36 530 41 546 5.85e-89 284
MS.gene072526.t1 AT5G09760 35.888 535 280 17 33 530 64 572 1.04e-88 285
MS.gene072526.t1 AT5G64640 33.272 547 279 15 38 534 91 601 4.80e-86 278
MS.gene072526.t1 AT5G20860 36.009 436 213 9 108 527 110 495 1.51e-80 261
MS.gene072526.t1 AT3G62170 29.982 557 326 14 37 542 45 588 5.96e-76 251
MS.gene072526.t1 AT2G47030 29.983 597 348 15 3 542 5 588 1.32e-75 250
MS.gene072526.t1 AT1G11370 44.487 263 132 2 219 472 29 286 1.94e-72 233
MS.gene072526.t1 AT2G47040 31.041 509 280 12 95 542 97 595 9.11e-72 240
MS.gene072526.t1 AT2G36710 34.884 301 186 4 243 536 93 390 3.46e-55 191
MS.gene072526.t1 AT5G19730 33.333 354 203 8 202 531 37 381 7.27e-54 187
MS.gene072526.t1 AT2G36700 32.153 339 207 6 198 531 13 333 1.18e-52 182
MS.gene072526.t1 AT1G05310 33.333 300 187 5 242 531 92 388 1.21e-49 176
MS.gene072526.t1 AT3G29090 34.615 312 179 7 243 537 9 312 3.25e-49 172
MS.gene072526.t1 AT3G17060 31.544 298 190 5 242 532 47 337 1.33e-48 172
MS.gene072526.t1 AT1G44980 44.149 188 103 1 219 404 54 241 5.04e-46 162
MS.gene072526.t1 AT5G47500 29.428 367 226 8 183 533 11 360 8.08e-46 165
MS.gene072526.t1 AT2G21610 31.615 291 186 5 243 531 53 332 8.51e-45 162
MS.gene072526.t1 AT2G21610 31.615 291 186 5 243 531 58 337 1.61e-44 161
MS.gene072526.t1 AT5G07430 34.021 291 178 7 247 531 73 355 7.52e-43 157
MS.gene072526.t1 AT5G18990 32.595 316 189 7 228 531 20 323 3.91e-41 151
MS.gene072526.t1 AT3G24130 30.938 320 194 9 228 531 20 328 1.15e-40 150
MS.gene072526.t1 AT5G55590 31.788 302 188 7 242 531 83 378 1.47e-38 145
MS.gene072526.t1 AT5G55590 32.927 246 150 5 242 475 83 325 2.94e-38 143
MS.gene072526.t1 AT3G49220 30.345 290 184 5 40 321 132 411 1.54e-37 144
MS.gene072526.t1 AT5G61680 29.912 341 202 9 204 531 42 358 1.32e-36 140
MS.gene072526.t1 AT2G19150 31.081 296 189 5 251 538 51 339 1.37e-36 139
MS.gene072526.t1 AT5G26810 32.258 279 168 5 242 504 35 308 3.61e-36 138
MS.gene072526.t1 AT5G07420 31.081 296 190 7 242 531 68 355 1.21e-33 131
MS.gene072526.t1 AT1G69940 27.891 294 189 7 249 531 74 355 7.40e-33 129
MS.gene072526.t1 AT2G19150 32.618 233 145 4 251 475 51 279 9.89e-33 127
MS.gene072526.t1 AT5G07410 27.551 294 190 7 249 531 74 355 1.30e-32 129
MS.gene072526.t1 AT2G47280 28.808 302 195 7 243 533 37 329 1.65e-29 119
MS.gene072526.t1 AT3G62820 27.979 193 124 5 5 194 9 189 5.83e-14 71.2
MS.gene072526.t1 AT5G62360 32.593 135 85 3 58 190 64 194 7.55e-13 68.2
MS.gene072526.t1 AT1G62770 28.000 200 120 6 7 194 8 195 3.87e-11 63.2

Find 139 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCTCACAACCTACATATT+TGG 0.095781 7.2:-4290581 MS.gene072526:CDS
CAGACCAATCTGCATTCTTT+AGG 0.260515 7.2:-4290840 MS.gene072526:CDS
TGTTAATGTGTAGCTGTATC+TGG 0.260734 7.2:-4290946 MS.gene072526:intron
GCCTCACAACCTACATATTT+GGG 0.269773 7.2:-4290580 MS.gene072526:CDS
AGCTTAATCGCTTACCCTTT+AGG 0.279269 7.2:-4291471 MS.gene072526:CDS
AAGCTTGCATATCTTGAGTT+TGG 0.290313 7.2:+4291956 None:intergenic
AATCCAAGATAGTTATGTTT+TGG 0.298560 7.2:-4290602 MS.gene072526:CDS
CTTGATCAAATGATGGTAAA+AGG 0.313433 7.2:+4292013 None:intergenic
GTGAACTTAACACCTGTTCT+AGG 0.327842 7.2:+4290304 None:intergenic
TACGGTGAATACAGGAATTA+TGG 0.331114 7.2:-4290442 MS.gene072526:CDS
TGGACTTGGAGGGCCTGTTC+TGG 0.341206 7.2:+4291864 None:intergenic
CTACATATTTGGGGAGGCCT+TGG 0.347308 7.2:-4290570 MS.gene072526:CDS
TTCTTTAGGTGTAGCATAGA+AGG 0.349482 7.2:-4290826 MS.gene072526:CDS
GGTTCCTTAACGGCGGTTCA+TGG 0.359467 7.2:-4290330 MS.gene072526:CDS
TCAGAGCTTGCATGGTCGTT+AGG 0.365066 7.2:-4291694 MS.gene072526:CDS
TGTTTGTGAGGCATGAGTTT+TGG 0.365441 7.2:+4291902 None:intergenic
GATCTTTGTCATGTTGTTGA+TGG 0.368569 7.2:+4291789 None:intergenic
GCCACGGCTTGATGGTTTAC+CGG 0.370851 7.2:+4290877 None:intergenic
TCAGCCTCTGTCATCCATTC+AGG 0.371531 7.2:+4291394 None:intergenic
GAGCTCCTTGCAATCTTCTA+TGG 0.371794 7.2:+4291732 None:intergenic
TACCGTGAATGCGAAATCTA+TGG 0.377605 7.2:-4290763 MS.gene072526:CDS
CACGCAATGCCACGGCTTGA+TGG 0.381995 7.2:+4290869 None:intergenic
AACTAGTACTGATGAAAGTT+TGG 0.382732 7.2:-4291422 MS.gene072526:CDS
ATGTCTGAGGGAATTTCATC+TGG 0.384523 7.2:+4291979 None:intergenic
TTACCGGTCCAGCAGTGTTC+CGG 0.387620 7.2:+4290893 None:intergenic
CAGAGCTTGCATGGTCGTTA+GGG 0.395199 7.2:-4291693 MS.gene072526:CDS
TCTACCAGCGAGCGATGAAC+CGG 0.402703 7.2:+4290417 None:intergenic
ACGGTTCAGCGGTTCCTTAA+CGG 0.416002 7.2:-4290340 MS.gene072526:CDS
GATGCAGTTGTTGCGTTGGA+TGG 0.417977 7.2:-4291331 MS.gene072526:CDS
AGGCCAAAACATAACTATCT+TGG 0.418609 7.2:+4290599 None:intergenic
CCGCACTTAGCCATGCTTCG+AGG 0.428133 7.2:+4291620 None:intergenic
CAGCTCCTAGTCATAGCAAT+AGG 0.443935 7.2:-4291270 MS.gene072526:CDS
CCGCTGAACCGTAAAATAAC+CGG 0.446817 7.2:+4290351 None:intergenic
TAACACATACATGAGTAGTA+TGG 0.446857 7.2:-4290521 MS.gene072526:CDS
ATGACATTCCGGAACACTGC+TGG 0.450390 7.2:-4290901 MS.gene072526:CDS
CATGTTGTTGATGGCACCTA+TGG 0.452823 7.2:+4291798 None:intergenic
ACAGAACATTACTGATAAGC+TGG 0.453691 7.2:+4291506 None:intergenic
ATTAAAGACGCTTCTGCCGC+CGG 0.455714 7.2:-4290370 MS.gene072526:CDS
TAACAGCTTCGTTGATTGTA+CGG 0.460625 7.2:+4291296 None:intergenic
CGTCTTGAGAGTTACATTAG+TGG 0.463916 7.2:-4291547 MS.gene072526:CDS
TCATGCAAGGTAGTGTTCCT+TGG 0.464611 7.2:+4291445 None:intergenic
GCAACCATGAACCGCCGTTA+AGG 0.465728 7.2:+4290326 None:intergenic
CATAACGAGCTAACCAGAAC+AGG 0.467307 7.2:-4291877 MS.gene072526:CDS
ACTTTGCATTAGACACTTTG+TGG 0.470978 7.2:-4290465 MS.gene072526:CDS
TTCCATAGATTTCGCATTCA+CGG 0.471515 7.2:+4290761 None:intergenic
GGTTCATGGTTGCCTAGAAC+AGG 0.472411 7.2:-4290316 MS.gene072526:CDS
TTGCAAGGGACATGACATTC+CGG 0.473496 7.2:-4290912 MS.gene072526:CDS
AGTTCCACTTCCATTACAAA+AGG 0.474475 7.2:-4290677 MS.gene072526:CDS
CTTTGTGGTACGGTGAATAC+AGG 0.485605 7.2:-4290450 MS.gene072526:CDS
GTGAAGCCTGTGCTTTGATG+TGG 0.491231 7.2:+4290625 None:intergenic
ATTCCGGAACACTGCTGGAC+CGG 0.491888 7.2:-4290896 MS.gene072526:CDS
AATCAAGACACATGTATTGA+AGG 0.492230 7.2:-4291589 MS.gene072526:CDS
ACAGGTGTTAAGTTCACAGC+AGG 0.494156 7.2:-4290298 MS.gene072526:CDS
ACATGTATTGAAGGGTTTGA+AGG 0.494549 7.2:-4291580 MS.gene072526:CDS
CGCTCGCTGGTAGAGTCAAA+TGG 0.495741 7.2:-4290408 MS.gene072526:CDS
AGAACTCTACTTACCAAAAG+TGG 0.497125 7.2:+4291093 None:intergenic
ACCTATGGCTTCATTGATTG+TGG 0.498951 7.2:+4291813 None:intergenic
ACATGTTATCTATGTGAAGA+AGG 0.503880 7.2:-4291245 MS.gene072526:CDS
ATGACAGAAGTTGGACTTGG+AGG 0.503881 7.2:+4291853 None:intergenic
GTAAAAGGATGAGAATGAAA+AGG 0.505964 7.2:+4292028 None:intergenic
GCAGCATTAATGACAGAAGT+TGG 0.507875 7.2:+4291844 None:intergenic
AAAGTTTGGAGTTTCCTGAA+TGG 0.509972 7.2:-4291408 MS.gene072526:CDS
AACCTCGAGGGTGGCTTGAG+TGG 0.510238 7.2:-4290495 MS.gene072526:CDS
AGTGTTCCTTGGAGACCTAA+AGG 0.513393 7.2:+4291456 None:intergenic
GTTCTAGAATATTCCTTCCA+AGG 0.522274 7.2:+4290553 None:intergenic
ATGATCGTTGGTGATGGTAT+TGG 0.525137 7.2:-4291175 MS.gene072526:CDS
GTGTTCCTTGGAGACCTAAA+GGG 0.526257 7.2:+4291457 None:intergenic
TGACAGAAGTTGGACTTGGA+GGG 0.528123 7.2:+4291854 None:intergenic
CTGGGAAGGGTTTCATTGCA+AGG 0.529923 7.2:-4290927 MS.gene072526:CDS
TTAATGACAGAAGTTGGACT+TGG 0.530794 7.2:+4291850 None:intergenic
GCATTAGACACTTTGTGGTA+CGG 0.536809 7.2:-4290460 MS.gene072526:CDS
GAGAGAACTTGATCAAATGA+TGG 0.538479 7.2:+4292006 None:intergenic
TTTGATTGCACAAGCTTGCA+TGG 0.540945 7.2:-4291935 MS.gene072526:CDS
CGAGGGTGGCTTGAGTGGCT+CGG 0.541369 7.2:-4290490 MS.gene072526:CDS
GCTCTGACACAGAGAAATCA+AGG 0.541696 7.2:+4291710 None:intergenic
TCTCTGTGTCAGAGCTTGCA+TGG 0.541979 7.2:-4291702 MS.gene072526:CDS
ATGCAGTTGTTGCGTTGGAT+GGG 0.542294 7.2:-4291330 MS.gene072526:CDS
ATCAAGACACATGTATTGAA+GGG 0.544777 7.2:-4291588 MS.gene072526:CDS
CAAGGCCTCCCCAAATATGT+AGG 0.548118 7.2:+4290571 None:intergenic
ATGTGTAGCTGTATCTGGGA+AGG 0.551122 7.2:-4290941 MS.gene072526:intron
TGGGAAGGGTTTCATTGCAA+GGG 0.552908 7.2:-4290926 MS.gene072526:CDS
ATTGCGATTGCTTGTAACAA+TGG 0.557427 7.2:+4291147 None:intergenic
GCTGGTAGAGTCAAATGGCC+TGG 0.558166 7.2:-4290403 MS.gene072526:CDS
ATATTTGGGGAGGCCTTGGA+AGG 0.559715 7.2:-4290566 MS.gene072526:CDS
TGTGTAGCTGTATCTGGGAA+GGG 0.561947 7.2:-4290940 MS.gene072526:intron
TGCAGATGCAGTTGTTGCGT+TGG 0.563751 7.2:-4291335 MS.gene072526:CDS
AAAAGTCCACATCAAAGCAC+AGG 0.565467 7.2:-4290631 MS.gene072526:CDS
ATCAGTACTAGTTTCATGCA+AGG 0.565775 7.2:+4291432 None:intergenic
AAAAGTGGCAGTTCGAAAAG+TGG 0.570595 7.2:+4291108 None:intergenic
TACACCTAAAGAATGCAGAT+TGG 0.571861 7.2:+4290836 None:intergenic
ATCGCAATTTCATGCAAGGA+TGG 0.575589 7.2:-4291132 MS.gene072526:CDS
AAGGTTACAATCACAGCTCA+AGG 0.578151 7.2:-4290658 MS.gene072526:CDS
AACATCATGATCGTTGGTGA+TGG 0.582464 7.2:-4291181 MS.gene072526:CDS
TGTGAAGAAGGGACTATACA+AGG 0.586315 7.2:-4291233 MS.gene072526:CDS
GTTAATGTGTAGCTGTATCT+GGG 0.587683 7.2:-4290945 MS.gene072526:intron
TCTTGAGTTTGGATGTCTGA+GGG 0.587826 7.2:+4291967 None:intergenic
GTTGTTGCGTTGGATGGGAG+CGG 0.587962 7.2:-4291325 MS.gene072526:CDS
AGCAATCGCAATTTCATGCA+AGG 0.589039 7.2:-4291136 MS.gene072526:CDS
CATGTTATCTATGTGAAGAA+GGG 0.590596 7.2:-4291244 MS.gene072526:CDS
GGACCCGGTTCATCGCTCGC+TGG 0.591181 7.2:-4290421 MS.gene072526:CDS
GAAAAGGAAATTCACTAGCA+AGG 0.591237 7.2:+4292044 None:intergenic
ATCACCAACGATCATGATGT+TGG 0.592216 7.2:+4291183 None:intergenic
AGTGTGCGTAAAGTGTGTCT+TGG 0.597316 7.2:+4290800 None:intergenic
ACGAAGGAAACCTCGAAGCA+TGG 0.597380 7.2:-4291630 MS.gene072526:CDS
ATGACCAACATCATGATCGT+TGG 0.598022 7.2:-4291187 MS.gene072526:CDS
ATCTTGAGTTTGGATGTCTG+AGG 0.599334 7.2:+4291966 None:intergenic
GCTCGTTATGAATGTTTGTG+AGG 0.604269 7.2:+4291890 None:intergenic
CAGAACATTACTGATAAGCT+GGG 0.605848 7.2:+4291507 None:intergenic
TTACAATCACAGCTCAAGGT+AGG 0.609803 7.2:-4290654 MS.gene072526:CDS
CTTCTATGGCAAGTTGCTCG+CGG 0.617529 7.2:+4291746 None:intergenic
GCTTACCCTTTAGGTCTCCA+AGG 0.618807 7.2:-4291462 MS.gene072526:CDS
CATGGTCGTTAGGGGAGATG+AGG 0.619966 7.2:-4291684 MS.gene072526:CDS
ACTTGCCATAGAAGATTGCA+AGG 0.620029 7.2:-4291737 MS.gene072526:CDS
CCCCAAATATGTAGGTTGTG+AGG 0.623360 7.2:+4290579 None:intergenic
GTAGTATGGTTCAACCTCGA+GGG 0.629470 7.2:-4290507 MS.gene072526:CDS
AGTAGTATGGTTCAACCTCG+AGG 0.630686 7.2:-4290508 MS.gene072526:CDS
TGAATCGACACGCAATGCCA+CGG 0.630967 7.2:+4290861 None:intergenic
GACAGAACTGCGCAGTACGA+AGG 0.633449 7.2:-4291646 MS.gene072526:CDS
GAGATGAGGAGAATTCGAGC+CGG 0.635377 7.2:-4291670 MS.gene072526:CDS
CTACCAGCGAGCGATGAACC+GGG 0.640025 7.2:+4290418 None:intergenic
TGTCTGAGGGAATTTCATCT+GGG 0.640715 7.2:+4291980 None:intergenic
GTACTGCGCAGTTCTGTCGC+CGG 0.644383 7.2:+4291651 None:intergenic
CCTCACAACCTACATATTTG+GGG 0.650108 7.2:-4290579 MS.gene072526:CDS
AGAGCTTGCATGGTCGTTAG+GGG 0.652304 7.2:-4291692 MS.gene072526:CDS
TGTCTCCTATTGCTATGACT+AGG 0.654035 7.2:+4291265 None:intergenic
GTATGGTTCAACCTCGAGGG+TGG 0.654064 7.2:-4290504 MS.gene072526:CDS
TCTTTAATGACATGATAACC+AGG 0.655480 7.2:+4290385 None:intergenic
CCTCGAAGCATGGCTAAGTG+CGG 0.658255 7.2:-4291620 MS.gene072526:CDS
ACCACAATCAATGAAGCCAT+AGG 0.663784 7.2:-4291814 MS.gene072526:CDS
ACCGGTAAACCATCAAGCCG+TGG 0.664465 7.2:-4290878 MS.gene072526:CDS
GAATACAGGAATTATGGACC+CGG 0.671183 7.2:-4290436 MS.gene072526:CDS
CACAACCTACATATTTGGGG+AGG 0.675764 7.2:-4290576 MS.gene072526:CDS
CTACTTAAATCTAAGCCGCA+CGG 0.678224 7.2:-4291364 MS.gene072526:CDS
AGCCACTCAAGCCACCCTCG+AGG 0.711855 7.2:+4290493 None:intergenic
GTTCAGCGGTTCCTTAACGG+CGG 0.714803 7.2:-4290337 MS.gene072526:CDS
CAGGTGTTAAGTTCACAGCA+GGG 0.718376 7.2:-4290297 MS.gene072526:CDS
CTGAACCGTAAAATAACCGG+CGG 0.728593 7.2:+4290354 None:intergenic
GTTTCCTGAATGGATGACAG+AGG 0.756653 7.2:-4291398 MS.gene072526:CDS
GCATCTGCAATCTTACCGTG+CGG 0.785544 7.2:+4291349 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TGAATTGGTATATACTGAAT+TGG - chr7.2:4291350-4291369 MS.gene072526:CDS 25.0%
!! AATCCAAGATAGTTATGTTT+TGG - chr7.2:4291731-4291750 MS.gene072526:CDS 25.0%
AATCAAGACACATGTATTGA+AGG - chr7.2:4290744-4290763 MS.gene072526:CDS 30.0%
ACATGTTATCTATGTGAAGA+AGG - chr7.2:4291088-4291107 MS.gene072526:intron 30.0%
ATCAAGACACATGTATTGAA+GGG - chr7.2:4290745-4290764 MS.gene072526:CDS 30.0%
ATTCCCAAAAATGAAGTCTA+TGG + chr7.2:4291598-4291617 None:intergenic 30.0%
CATGTTATCTATGTGAAGAA+GGG - chr7.2:4291089-4291108 MS.gene072526:intron 30.0%
CTTGATCAAATGATGGTAAA+AGG + chr7.2:4290323-4290342 None:intergenic 30.0%
GTAAAAGGATGAGAATGAAA+AGG + chr7.2:4290308-4290327 None:intergenic 30.0%
TAACACATACATGAGTAGTA+TGG - chr7.2:4291812-4291831 MS.gene072526:CDS 30.0%
TCTTTAATGACATGATAACC+AGG + chr7.2:4291951-4291970 None:intergenic 30.0%
! ACACACTCTTTTCAATATGT+AGG + chr7.2:4291323-4291342 None:intergenic 30.0%
! GTGATTGTAACCTTTTGTAA+TGG + chr7.2:4291669-4291688 None:intergenic 30.0%
!! AACTAGTACTGATGAAAGTT+TGG - chr7.2:4290911-4290930 MS.gene072526:CDS 30.0%
!! ATAGACTTCATTTTTGGGAA+TGG - chr7.2:4291597-4291616 MS.gene072526:CDS 30.0%
!! GAACCATAGACTTCATTTTT+GGG - chr7.2:4291592-4291611 MS.gene072526:CDS 30.0%
AACAGTATTTCTCTAGCGTA+AGG - chr7.2:4291268-4291287 MS.gene072526:CDS 35.0%
AAGCTTGCATATCTTGAGTT+TGG + chr7.2:4290380-4290399 None:intergenic 35.0%
ACAGAACATTACTGATAAGC+TGG + chr7.2:4290830-4290849 None:intergenic 35.0%
ACATGTATTGAAGGGTTTGA+AGG - chr7.2:4290753-4290772 MS.gene072526:CDS 35.0%
ACTTTGCATTAGACACTTTG+TGG - chr7.2:4291868-4291887 MS.gene072526:CDS 35.0%
AGAACTCTACTTACCAAAAG+TGG + chr7.2:4291243-4291262 None:intergenic 35.0%
AGGCCAAAACATAACTATCT+TGG + chr7.2:4291737-4291756 None:intergenic 35.0%
AGTTCCACTTCCATTACAAA+AGG - chr7.2:4291656-4291675 MS.gene072526:CDS 35.0%
ATTGCGATTGCTTGTAACAA+TGG + chr7.2:4291189-4291208 None:intergenic 35.0%
CAGAACATTACTGATAAGCT+GGG + chr7.2:4290829-4290848 None:intergenic 35.0%
GAAAAGGAAATTCACTAGCA+AGG + chr7.2:4290292-4290311 None:intergenic 35.0%
GAGAGAACTTGATCAAATGA+TGG + chr7.2:4290330-4290349 None:intergenic 35.0%
GAGTGTGTTAGAGAATGAAT+TGG - chr7.2:4291335-4291354 MS.gene072526:CDS 35.0%
GATCTTTGTCATGTTGTTGA+TGG + chr7.2:4290547-4290566 None:intergenic 35.0%
GTTAATGTGTAGCTGTATCT+GGG - chr7.2:4291388-4291407 MS.gene072526:CDS 35.0%
TACACCTAAAGAATGCAGAT+TGG + chr7.2:4291500-4291519 None:intergenic 35.0%
TACGGTGAATACAGGAATTA+TGG - chr7.2:4291891-4291910 MS.gene072526:CDS 35.0%
TGTTAATGTGTAGCTGTATC+TGG - chr7.2:4291387-4291406 MS.gene072526:CDS 35.0%
TTAATGACAGAAGTTGGACT+TGG + chr7.2:4290486-4290505 None:intergenic 35.0%
TTCCATAGATTTCGCATTCA+CGG + chr7.2:4291575-4291594 None:intergenic 35.0%
TTCTTTAGGTGTAGCATAGA+AGG - chr7.2:4291507-4291526 MS.gene072526:CDS 35.0%
! AAAGTTTGGAGTTTCCTGAA+TGG - chr7.2:4290925-4290944 MS.gene072526:CDS 35.0%
! ATCAGTACTAGTTTCATGCA+AGG + chr7.2:4290904-4290923 None:intergenic 35.0%
! GGAACCATAGACTTCATTTT+TGG - chr7.2:4291591-4291610 MS.gene072526:CDS 35.0%
! TAACAGCTTCGTTGATTGTA+CGG + chr7.2:4291040-4291059 None:intergenic 35.0%
!! GTAACCTTTTGTAATGGAAG+TGG + chr7.2:4291663-4291682 None:intergenic 35.0%
!! GTTCTAGAATATTCCTTCCA+AGG + chr7.2:4291783-4291802 None:intergenic 35.0%
AAAAGTCCACATCAAAGCAC+AGG - chr7.2:4291702-4291721 MS.gene072526:CDS 40.0%
AAAAGTGGCAGTTCGAAAAG+TGG + chr7.2:4291228-4291247 None:intergenic 40.0%
AAGGTTACAATCACAGCTCA+AGG - chr7.2:4291675-4291694 MS.gene072526:CDS 40.0%
ACCACAATCAATGAAGCCAT+AGG - chr7.2:4290519-4290538 MS.gene072526:CDS 40.0%
ACTTGCCATAGAAGATTGCA+AGG - chr7.2:4290596-4290615 MS.gene072526:CDS 40.0%
AGCAATCGCAATTTCATGCA+AGG - chr7.2:4291197-4291216 MS.gene072526:CDS 40.0%
AGCTTAATCGCTTACCCTTT+AGG - chr7.2:4290862-4290881 MS.gene072526:CDS 40.0%
ATCACCAACGATCATGATGT+TGG + chr7.2:4291153-4291172 None:intergenic 40.0%
ATCGCAATTTCATGCAAGGA+TGG - chr7.2:4291201-4291220 MS.gene072526:CDS 40.0%
ATCTTGAGTTTGGATGTCTG+AGG + chr7.2:4290370-4290389 None:intergenic 40.0%
ATGACCAACATCATGATCGT+TGG - chr7.2:4291146-4291165 MS.gene072526:CDS 40.0%
ATGTCTGAGGGAATTTCATC+TGG + chr7.2:4290357-4290376 None:intergenic 40.0%
CAGACCAATCTGCATTCTTT+AGG - chr7.2:4291493-4291512 MS.gene072526:CDS 40.0%
CCTCACAACCTACATATTTG+GGG - chr7.2:4291754-4291773 MS.gene072526:CDS 40.0%
CGTCTTGAGAGTTACATTAG+TGG - chr7.2:4290786-4290805 MS.gene072526:CDS 40.0%
CTACTTAAATCTAAGCCGCA+CGG - chr7.2:4290969-4290988 MS.gene072526:intron 40.0%
GAATACAGGAATTATGGACC+CGG - chr7.2:4291897-4291916 MS.gene072526:CDS 40.0%
GCAGCATTAATGACAGAAGT+TGG + chr7.2:4290492-4290511 None:intergenic 40.0%
GCATTAGACACTTTGTGGTA+CGG - chr7.2:4291873-4291892 MS.gene072526:CDS 40.0%
GCCTCACAACCTACATATTT+GGG - chr7.2:4291753-4291772 MS.gene072526:CDS 40.0%
GCTCGTTATGAATGTTTGTG+AGG + chr7.2:4290446-4290465 None:intergenic 40.0%
GTGAACTTAACACCTGTTCT+AGG + chr7.2:4292032-4292051 None:intergenic 40.0%
TACCGTGAATGCGAAATCTA+TGG - chr7.2:4291570-4291589 MS.gene072526:CDS 40.0%
TCTTGAGTTTGGATGTCTGA+GGG + chr7.2:4290369-4290388 None:intergenic 40.0%
TGTCTCCTATTGCTATGACT+AGG + chr7.2:4291071-4291090 None:intergenic 40.0%
TGTCTGAGGGAATTTCATCT+GGG + chr7.2:4290356-4290375 None:intergenic 40.0%
TGTGAAGAAGGGACTATACA+AGG - chr7.2:4291100-4291119 MS.gene072526:intron 40.0%
TTACAATCACAGCTCAAGGT+AGG - chr7.2:4291679-4291698 MS.gene072526:CDS 40.0%
TTTGATTGCACAAGCTTGCA+TGG - chr7.2:4290398-4290417 MS.gene072526:CDS 40.0%
! AACATCATGATCGTTGGTGA+TGG - chr7.2:4291152-4291171 MS.gene072526:CDS 40.0%
! ACCTATGGCTTCATTGATTG+TGG + chr7.2:4290523-4290542 None:intergenic 40.0%
! TGTTTGTGAGGCATGAGTTT+TGG + chr7.2:4290434-4290453 None:intergenic 40.0%
!! ATGATCGTTGGTGATGGTAT+TGG - chr7.2:4291158-4291177 MS.gene072526:CDS 40.0%
!!! ACTTTTCGAACTGCCACTTT+TGG - chr7.2:4291227-4291246 MS.gene072526:CDS 40.0%
ACAGGTGTTAAGTTCACAGC+AGG - chr7.2:4292035-4292054 MS.gene072526:CDS 45.0%
AGTAGTATGGTTCAACCTCG+AGG - chr7.2:4291825-4291844 MS.gene072526:CDS 45.0%
AGTGTGCGTAAAGTGTGTCT+TGG + chr7.2:4291536-4291555 None:intergenic 45.0%
AGTGTTCCTTGGAGACCTAA+AGG + chr7.2:4290880-4290899 None:intergenic 45.0%
ATGACAGAAGTTGGACTTGG+AGG + chr7.2:4290483-4290502 None:intergenic 45.0%
ATGCAGTTGTTGCGTTGGAT+GGG - chr7.2:4291003-4291022 MS.gene072526:intron 45.0%
ATGTGTAGCTGTATCTGGGA+AGG - chr7.2:4291392-4291411 MS.gene072526:CDS 45.0%
CACAACCTACATATTTGGGG+AGG - chr7.2:4291757-4291776 MS.gene072526:CDS 45.0%
CAGCTCCTAGTCATAGCAAT+AGG - chr7.2:4291063-4291082 MS.gene072526:intron 45.0%
CAGGTGTTAAGTTCACAGCA+GGG - chr7.2:4292036-4292055 MS.gene072526:CDS 45.0%
CATAACGAGCTAACCAGAAC+AGG - chr7.2:4290456-4290475 MS.gene072526:CDS 45.0%
CCCCAAATATGTAGGTTGTG+AGG + chr7.2:4291757-4291776 None:intergenic 45.0%
CCGCTGAACCGTAAAATAAC+CGG + chr7.2:4291985-4292004 None:intergenic 45.0%
CTGAACCGTAAAATAACCGG+CGG + chr7.2:4291982-4292001 None:intergenic 45.0%
CTTTGTGGTACGGTGAATAC+AGG - chr7.2:4291883-4291902 MS.gene072526:CDS 45.0%
GAGCTCCTTGCAATCTTCTA+TGG + chr7.2:4290604-4290623 None:intergenic 45.0%
GCTCTGACACAGAGAAATCA+AGG + chr7.2:4290626-4290645 None:intergenic 45.0%
GGCCTCACAACCTACATATT+TGG - chr7.2:4291752-4291771 MS.gene072526:CDS 45.0%
GTAGTATGGTTCAACCTCGA+GGG - chr7.2:4291826-4291845 MS.gene072526:CDS 45.0%
GTGTTCCTTGGAGACCTAAA+GGG + chr7.2:4290879-4290898 None:intergenic 45.0%
GTTTCCTGAATGGATGACAG+AGG - chr7.2:4290935-4290954 MS.gene072526:CDS 45.0%
TCATGCAAGGTAGTGTTCCT+TGG + chr7.2:4290891-4290910 None:intergenic 45.0%
TGACAGAAGTTGGACTTGGA+GGG + chr7.2:4290482-4290501 None:intergenic 45.0%
TGGGAAGGGTTTCATTGCAA+GGG - chr7.2:4291407-4291426 MS.gene072526:CDS 45.0%
TGTGTAGCTGTATCTGGGAA+GGG - chr7.2:4291393-4291412 MS.gene072526:CDS 45.0%
TTGCAAGGGACATGACATTC+CGG - chr7.2:4291421-4291440 MS.gene072526:CDS 45.0%
!! CATGTTGTTGATGGCACCTA+TGG + chr7.2:4290538-4290557 None:intergenic 45.0%
!! CCGGTTATTTTACGGTTCAG+CGG - chr7.2:4291982-4292001 MS.gene072526:CDS 45.0%
!! TTCTGCCGCCGGTTATTTTA+CGG - chr7.2:4291974-4291993 MS.gene072526:CDS 45.0%
ACGAAGGAAACCTCGAAGCA+TGG - chr7.2:4290703-4290722 MS.gene072526:CDS 50.0%
ACGGTTCAGCGGTTCCTTAA+CGG - chr7.2:4291993-4292012 MS.gene072526:CDS 50.0%
AGAGCTTGCATGGTCGTTAG+GGG - chr7.2:4290641-4290660 MS.gene072526:CDS 50.0%
ATATTTGGGGAGGCCTTGGA+AGG - chr7.2:4291767-4291786 MS.gene072526:CDS 50.0%
ATGACATTCCGGAACACTGC+TGG - chr7.2:4291432-4291451 MS.gene072526:CDS 50.0%
ATTAAAGACGCTTCTGCCGC+CGG - chr7.2:4291963-4291982 MS.gene072526:CDS 50.0%
CAAGGCCTCCCCAAATATGT+AGG + chr7.2:4291765-4291784 None:intergenic 50.0%
CAGAGCTTGCATGGTCGTTA+GGG - chr7.2:4290640-4290659 MS.gene072526:CDS 50.0%
CTACATATTTGGGGAGGCCT+TGG - chr7.2:4291763-4291782 MS.gene072526:CDS 50.0%
CTGGGAAGGGTTTCATTGCA+AGG - chr7.2:4291406-4291425 MS.gene072526:CDS 50.0%
CTTCTATGGCAAGTTGCTCG+CGG + chr7.2:4290590-4290609 None:intergenic 50.0%
GAGATGAGGAGAATTCGAGC+CGG - chr7.2:4290663-4290682 MS.gene072526:CDS 50.0%
GATGCAGTTGTTGCGTTGGA+TGG - chr7.2:4291002-4291021 MS.gene072526:intron 50.0%
GCATCTGCAATCTTACCGTG+CGG + chr7.2:4290987-4291006 None:intergenic 50.0%
GCTTACCCTTTAGGTCTCCA+AGG - chr7.2:4290871-4290890 MS.gene072526:CDS 50.0%
GGTTCATGGTTGCCTAGAAC+AGG - chr7.2:4292017-4292036 MS.gene072526:CDS 50.0%
GTGAAGCCTGTGCTTTGATG+TGG + chr7.2:4291711-4291730 None:intergenic 50.0%
TCAGAGCTTGCATGGTCGTT+AGG - chr7.2:4290639-4290658 MS.gene072526:CDS 50.0%
TCAGCCTCTGTCATCCATTC+AGG + chr7.2:4290942-4290961 None:intergenic 50.0%
TCTCTGTGTCAGAGCTTGCA+TGG - chr7.2:4290631-4290650 MS.gene072526:CDS 50.0%
TGAATCGACACGCAATGCCA+CGG + chr7.2:4291475-4291494 None:intergenic 50.0%
TGCAGATGCAGTTGTTGCGT+TGG - chr7.2:4290998-4291017 MS.gene072526:intron 50.0%
ACCGGTAAACCATCAAGCCG+TGG - chr7.2:4291455-4291474 MS.gene072526:CDS 55.0%
ATTCCGGAACACTGCTGGAC+CGG - chr7.2:4291437-4291456 MS.gene072526:CDS 55.0%
CATGGTCGTTAGGGGAGATG+AGG - chr7.2:4290649-4290668 MS.gene072526:CDS 55.0%
CCTCGAAGCATGGCTAAGTG+CGG - chr7.2:4290713-4290732 MS.gene072526:CDS 55.0%
CGCTCGCTGGTAGAGTCAAA+TGG - chr7.2:4291925-4291944 MS.gene072526:CDS 55.0%
GACAGAACTGCGCAGTACGA+AGG - chr7.2:4290687-4290706 MS.gene072526:CDS 55.0%
GCAACCATGAACCGCCGTTA+AGG + chr7.2:4292010-4292029 None:intergenic 55.0%
GCTGGTAGAGTCAAATGGCC+TGG - chr7.2:4291930-4291949 MS.gene072526:CDS 55.0%
GGTTCCTTAACGGCGGTTCA+TGG - chr7.2:4292003-4292022 MS.gene072526:CDS 55.0%
GTATGGTTCAACCTCGAGGG+TGG - chr7.2:4291829-4291848 MS.gene072526:CDS 55.0%
GTTCAGCGGTTCCTTAACGG+CGG - chr7.2:4291996-4292015 MS.gene072526:CDS 55.0%
GTTGTTGCGTTGGATGGGAG+CGG - chr7.2:4291008-4291027 MS.gene072526:intron 55.0%
TCTACCAGCGAGCGATGAAC+CGG + chr7.2:4291919-4291938 None:intergenic 55.0%
TTACCGGTCCAGCAGTGTTC+CGG + chr7.2:4291443-4291462 None:intergenic 55.0%
! GCCACGGCTTGATGGTTTAC+CGG + chr7.2:4291459-4291478 None:intergenic 55.0%
AACCTCGAGGGTGGCTTGAG+TGG - chr7.2:4291838-4291857 MS.gene072526:CDS 60.0%
CACGCAATGCCACGGCTTGA+TGG + chr7.2:4291467-4291486 None:intergenic 60.0%
CCGCACTTAGCCATGCTTCG+AGG + chr7.2:4290716-4290735 None:intergenic 60.0%
CTACCAGCGAGCGATGAACC+GGG + chr7.2:4291918-4291937 None:intergenic 60.0%
GTACTGCGCAGTTCTGTCGC+CGG + chr7.2:4290685-4290704 None:intergenic 60.0%
TGGACTTGGAGGGCCTGTTC+TGG + chr7.2:4290472-4290491 None:intergenic 60.0%
AGCCACTCAAGCCACCCTCG+AGG + chr7.2:4291843-4291862 None:intergenic 65.0%
CGAGGGTGGCTTGAGTGGCT+CGG - chr7.2:4291843-4291862 MS.gene072526:CDS 65.0%
GGACCCGGTTCATCGCTCGC+TGG - chr7.2:4291912-4291931 MS.gene072526:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 4290285 4292070 4290285 ID=MS.gene072526
chr7.2 mRNA 4290285 4292070 4290285 ID=MS.gene072526.t1;Parent=MS.gene072526
chr7.2 exon 4291107 4292070 4291107 ID=MS.gene072526.t1.exon1;Parent=MS.gene072526.t1
chr7.2 CDS 4291107 4292070 4291107 ID=cds.MS.gene072526.t1;Parent=MS.gene072526.t1
chr7.2 exon 4290285 4290955 4290285 ID=MS.gene072526.t1.exon2;Parent=MS.gene072526.t1
chr7.2 CDS 4290285 4290955 4290285 ID=cds.MS.gene072526.t1;Parent=MS.gene072526.t1
Gene Sequence

>MS.gene072526

ATGGCCTTGCTAGTGAATTTCCTTTTCATTCTCATCCTTTTACCATCATTTGATCAAGTTCTCTCATTCCCAGATGAAATTCCCTCAGACATCCAAACTCAAGATATGCAAGCTTTGATTGCACAAGCTTGCATGGATATTGAAAACCAAAACTCATGCCTCACAAACATTCATAACGAGCTAACCAGAACAGGCCCTCCAAGTCCAACTTCTGTCATTAATGCTGCACTTAGAACCACAATCAATGAAGCCATAGGTGCCATCAACAACATGACAAAGATCAGTACATTCTCTGTTAATAACCGCGAGCAACTTGCCATAGAAGATTGCAAGGAGCTCCTTGATTTCTCTGTGTCAGAGCTTGCATGGTCGTTAGGGGAGATGAGGAGAATTCGAGCCGGCGACAGAACTGCGCAGTACGAAGGAAACCTCGAAGCATGGCTAAGTGCGGCGCTTAGCAATCAAGACACATGTATTGAAGGGTTTGAAGGCACTGATAGACGTCTTGAGAGTTACATTAGTGGAAGCTTAACACAAGTAACCCAGCTTATCAGTAATGTTCTGTCTTTGTACACTCAGCTTAATCGCTTACCCTTTAGGTCTCCAAGGAACACTACCTTGCATGAAACTAGTACTGATGAAAGTTTGGAGTTTCCTGAATGGATGACAGAGGCTGATCAAGAGCTACTTAAATCTAAGCCGCACGGTAAGATTGCAGATGCAGTTGTTGCGTTGGATGGGAGCGGTCAGTACCGTACAATCAACGAAGCTGTTAATGCAGCTCCTAGTCATAGCAATAGGAGACATGTTATCTATGTGAAGAAGGGACTATACAAGGAGAATATTGATATGAAGAAGAAGATGACCAACATCATGATCGTTGGTGATGGTATTGGTCAAACCATTGTTACAAGCAATCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACTTTTGGTAAGTAGAGTTCTTATTTAACAGTATTTCTCTAGCGTAAGGAATTGAAATCTGTGTTTTTTGTACTATCACCTACATATTGAAAAGAGTGTGTTAGAGAATGAATTGGTATATACTGAATTGGTTGATAATTTGAAATGTTAATGTGTAGCTGTATCTGGGAAGGGTTTCATTGCAAGGGACATGACATTCCGGAACACTGCTGGACCGGTAAACCATCAAGCCGTGGCATTGCGTGTCGATTCAGACCAATCTGCATTCTTTAGGTGTAGCATAGAAGGAAACCAAGACACACTTTACGCACACTCACTGAGACAGTTCTACCGTGAATGCGAAATCTATGGAACCATAGACTTCATTTTTGGGAATGGAGCTGCTGTGCTACAAAACTGCAAGATATACACAAGAGTTCCACTTCCATTACAAAAGGTTACAATCACAGCTCAAGGTAGGAAAAGTCCACATCAAAGCACAGGCTTCACAATCCAAGATAGTTATGTTTTGGCCTCACAACCTACATATTTGGGGAGGCCTTGGAAGGAATATTCTAGAACAGTTTACATTAACACATACATGAGTAGTATGGTTCAACCTCGAGGGTGGCTTGAGTGGCTCGGTAACTTTGCATTAGACACTTTGTGGTACGGTGAATACAGGAATTATGGACCCGGTTCATCGCTCGCTGGTAGAGTCAAATGGCCTGGTTATCATGTCATTAAAGACGCTTCTGCCGCCGGTTATTTTACGGTTCAGCGGTTCCTTAACGGCGGTTCATGGTTGCCTAGAACAGGTGTTAAGTTCACAGCAGGGCTAAGCAATTGA
Protein sequence

>MS.gene072526.t1

MALLVNFLFILILLPSFDQVLSFPDEIPSDIQTQDMQALIAQACMDIENQNSCLTNIHNELTRTGPPSPTSVINAALRTTINEAIGAINNMTKISTFSVNNREQLAIEDCKELLDFSVSELAWSLGEMRRIRAGDRTAQYEGNLEAWLSAALSNQDTCIEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLNRLPFRSPRNTTLHETSTDESLEFPEWMTEADQELLKSKPHGKIADAVVALDGSGQYRTINEAVNAAPSHSNRRHVIYVKKGLYKENIDMKKKMTNIMIVGDGIGQTIVTSNRNFMQGWTTFRTATFAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFFRCSIEGNQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYVLASQPTYLGRPWKEYSRTVYINTYMSSMVQPRGWLEWLGNFALDTLWYGEYRNYGPGSSLAGRVKWPGYHVIKDASAAGYFTVQRFLNGGSWLPRTGVKFTAGLSN