AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072528

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072528.t1 MTR_7g112580 99.081 544 5 0 1 544 1 544 0.0 1129
MS.gene072528.t1 MTR_4g087980 47.581 496 223 8 68 542 37 516 8.84e-159 463
MS.gene072528.t1 MTR_2g044880 47.699 478 222 8 80 542 61 525 2.26e-158 462
MS.gene072528.t1 MTR_3g091380 45.920 527 256 10 40 543 78 598 9.99e-156 458
MS.gene072528.t1 MTR_7g108905 41.187 556 304 8 1 543 12 557 5.69e-150 442
MS.gene072528.t1 MTR_1g008140 48.319 476 208 9 99 543 140 608 3.06e-149 442
MS.gene072528.t1 MTR_4g087970 43.912 501 246 10 64 543 32 518 1.51e-143 424
MS.gene072528.t1 MTR_4g025730 49.666 449 188 10 102 542 91 509 5.61e-143 422
MS.gene072528.t1 MTR_4g025690 49.339 454 189 10 100 542 90 513 2.08e-138 410
MS.gene072528.t1 MTR_8g042900 41.571 522 282 7 34 542 70 581 1.20e-136 408
MS.gene072528.t1 MTR_8g104655 45.070 497 235 10 68 542 61 541 4.75e-136 405
MS.gene072528.t1 MTR_3g010780 43.121 487 240 6 73 542 108 574 2.29e-135 405
MS.gene072528.t1 MTR_1g083520 44.304 474 230 8 89 542 69 528 1.84e-134 401
MS.gene072528.t1 MTR_8g023310 44.111 467 234 5 98 542 128 589 3.30e-133 400
MS.gene072528.t1 MTR_7g050980 45.275 455 218 8 102 542 118 555 7.11e-133 398
MS.gene072528.t1 MTR_7g050870 41.651 521 261 13 44 542 55 554 4.86e-131 393
MS.gene072528.t1 MTR_2g044810 42.017 476 249 8 76 542 77 534 1.93e-129 388
MS.gene072528.t1 MTR_4g025670 43.827 486 224 11 78 542 32 489 5.20e-129 385
MS.gene072528.t1 MTR_1g054880 44.516 465 228 8 106 542 96 558 6.34e-129 388
MS.gene072528.t1 MTR_8g104645 53.846 338 143 3 218 542 35 372 4.33e-127 377
MS.gene072528.t1 MTR_1g088020 44.111 467 229 8 106 542 91 555 5.16e-127 383
MS.gene072528.t1 MTR_7g050950 42.035 521 258 16 44 542 55 553 1.03e-125 379
MS.gene072528.t1 MTR_4g124520 43.590 429 217 6 127 542 105 521 3.08e-125 377
MS.gene072528.t1 MTR_3g010770 42.213 488 241 7 95 544 93 577 4.41e-125 379
MS.gene072528.t1 MTR_8g042910 43.182 484 230 10 98 542 135 612 3.56e-124 377
MS.gene072528.t1 MTR_7g108875 44.421 466 228 9 106 542 101 564 9.36e-124 375
MS.gene072528.t1 MTR_7g053360 44.270 445 218 8 109 542 102 527 4.09e-121 367
MS.gene072528.t1 MTR_1g088225 43.469 467 230 9 106 542 91 553 4.99e-121 367
MS.gene072528.t1 MTR_8g023150 42.209 507 272 8 44 538 81 578 5.85e-121 368
MS.gene072528.t1 MTR_3g008640 47.188 409 190 7 145 542 134 527 8.07e-121 366
MS.gene072528.t1 MTR_3g008720 46.944 409 191 7 145 542 134 527 6.97e-120 363
MS.gene072528.t1 MTR_4g035980 43.860 456 230 9 99 542 98 539 1.27e-119 363
MS.gene072528.t1 MTR_3g033690 47.073 410 189 8 145 542 133 526 1.55e-119 363
MS.gene072528.t1 MTR_1g086190 38.230 531 287 13 40 543 48 564 1.88e-119 363
MS.gene072528.t1 MTR_3g008700 46.472 411 194 7 143 542 132 527 4.55e-119 361
MS.gene072528.t1 MTR_7g108890 44.037 436 198 9 144 542 136 562 2.04e-117 358
MS.gene072528.t1 MTR_1g083490 35.888 535 317 10 23 538 44 571 4.70e-114 350
MS.gene072528.t1 MTR_1g083470 34.177 553 341 10 3 538 20 566 6.06e-114 350
MS.gene072528.t1 MTR_1g083500 34.177 553 341 10 3 538 20 566 6.06e-114 350
MS.gene072528.t1 MTR_1g083510 35.271 499 292 7 72 541 86 582 8.56e-114 350
MS.gene072528.t1 MTR_7g108900 41.614 471 238 11 106 543 95 561 1.60e-113 348
MS.gene072528.t1 MTR_1g086210 36.961 533 294 11 44 542 45 569 2.08e-113 348
MS.gene072528.t1 MTR_7g112590 37.302 504 284 9 69 544 86 585 7.74e-113 347
MS.gene072528.t1 MTR_4g005180 36.719 512 300 9 44 538 49 553 4.32e-112 345
MS.gene072528.t1 MTR_4g005170 36.914 512 299 9 44 538 67 571 5.93e-112 347
MS.gene072528.t1 MTR_4g124550 38.618 492 275 10 69 542 111 593 8.33e-110 340
MS.gene072528.t1 MTR_0458s0030 56.786 280 107 3 272 542 40 314 1.64e-109 329
MS.gene072528.t1 MTR_1g088040 56.786 280 107 3 272 542 40 314 1.64e-109 329
MS.gene072528.t1 MTR_2g044660 36.796 568 286 13 39 544 78 634 1.24e-108 338
MS.gene072528.t1 MTR_8g104580 40.040 497 227 12 68 542 53 500 2.35e-107 330
MS.gene072528.t1 MTR_2g436040 34.429 517 298 10 44 539 47 543 3.44e-105 328
MS.gene072528.t1 MTR_7g110560 34.091 572 316 17 3 542 7 549 1.07e-104 325
MS.gene072528.t1 MTR_4g120280 34.156 527 314 10 37 541 56 571 2.14e-103 323
MS.gene072528.t1 MTR_4g120290 33.022 536 330 8 26 541 45 571 1.59e-102 320
MS.gene072528.t1 MTR_7g110440 33.945 545 318 10 30 542 32 566 1.19e-98 310
MS.gene072528.t1 MTR_2g436050 33.397 521 321 9 37 541 53 563 4.79e-98 308
MS.gene072528.t1 MTR_3g095920 33.391 578 313 13 1 541 21 563 6.69e-97 305
MS.gene072528.t1 MTR_7g110490 35.110 544 315 11 30 543 32 567 1.50e-96 305
MS.gene072528.t1 MTR_7g110510 35.110 544 315 11 30 543 32 567 1.50e-96 305
MS.gene072528.t1 MTR_8g093460 34.155 568 320 13 7 544 10 553 8.02e-96 302
MS.gene072528.t1 MTR_2g044810 52.590 251 109 2 301 542 216 465 1.30e-92 291
MS.gene072528.t1 MTR_0618s0020 54.185 227 95 1 325 542 2 228 2.58e-85 264
MS.gene072528.t1 MTR_7g110420 33.880 549 311 14 30 537 32 569 6.02e-82 267
MS.gene072528.t1 MTR_7g110430 32.402 537 303 10 30 542 32 532 1.56e-81 265
MS.gene072528.t1 MTR_8g088610 40.774 336 178 7 218 539 45 373 1.82e-80 257
MS.gene072528.t1 MTR_2g105560 41.639 305 156 4 247 542 48 339 3.84e-75 241
MS.gene072528.t1 MTR_5g083620 36.873 339 194 6 219 542 23 356 8.01e-74 239
MS.gene072528.t1 MTR_0458s0010 34.205 459 249 11 106 542 91 518 1.70e-71 238
MS.gene072528.t1 MTR_7g107180 41.158 311 162 5 242 542 8 307 2.14e-71 231
MS.gene072528.t1 MTR_7g111560 32.308 520 306 14 43 542 63 556 2.92e-70 235
MS.gene072528.t1 MTR_6g024165 36.778 329 178 8 216 533 27 336 2.55e-58 197
MS.gene072528.t1 MTR_6g088810 33.333 381 227 11 172 531 3 377 4.72e-57 195
MS.gene072528.t1 MTR_1g086540 36.213 301 172 6 243 531 52 344 1.13e-56 193
MS.gene072528.t1 MTR_6g012800 37.413 286 159 5 243 515 8 286 2.46e-55 189
MS.gene072528.t1 MTR_2g039530 40.594 303 157 10 217 509 30 319 5.21e-55 189
MS.gene072528.t1 MTR_8g102380 35.473 296 172 5 249 531 88 377 1.70e-52 183
MS.gene072528.t1 MTR_7g011530 34.545 275 162 3 243 504 8 277 1.16e-48 171
MS.gene072528.t1 MTR_7g102600 33.446 296 187 4 243 531 101 393 1.82e-48 173
MS.gene072528.t1 MTR_7g092780 32.333 300 190 5 242 531 91 387 2.99e-47 169
MS.gene072528.t1 MTR_6g042660 34.601 263 158 5 247 504 43 296 4.45e-47 167
MS.gene072528.t1 MTR_5g093970 33.677 291 187 4 242 531 44 329 4.49e-46 165
MS.gene072528.t1 MTR_5g012600 32.915 319 192 7 232 534 50 362 2.12e-45 164
MS.gene072528.t1 MTR_6g042690 34.432 273 160 5 242 504 40 303 2.81e-45 162
MS.gene072528.t1 MTR_8g102380 36.667 240 136 3 249 475 88 324 4.16e-44 159
MS.gene072528.t1 MTR_5g095490 32.323 297 183 5 247 531 67 357 1.63e-43 158
MS.gene072528.t1 MTR_1g033050 33.684 285 173 6 232 504 4 284 4.48e-43 156
MS.gene072528.t1 MTR_4g124740 32.890 301 173 9 243 531 56 339 1.40e-41 153
MS.gene072528.t1 MTR_2g033970 29.097 299 194 6 243 532 58 347 4.19e-41 152
MS.gene072528.t1 MTR_5g083590 29.206 315 163 6 238 542 4 268 3.20e-40 147
MS.gene072528.t1 MTR_5g088300 31.633 294 182 5 242 531 38 316 1.00e-36 139
MS.gene072528.t1 MTR_2g436600 27.703 296 193 8 243 532 57 337 2.48e-36 138
MS.gene072528.t1 MTR_4g074290 29.618 314 203 7 226 531 58 361 4.70e-35 135
MS.gene072528.t1 MTR_2g073390 28.889 315 204 8 226 531 58 361 2.79e-34 133
MS.gene072528.t1 MTR_8g036225 30.147 272 172 5 243 504 35 298 9.75e-33 128
MS.gene072528.t1 MTR_5g088290 30.556 288 190 3 242 526 49 329 2.13e-32 127
MS.gene072528.t1 MTR_4g051810 29.866 298 197 5 236 531 30 317 5.51e-32 125
MS.gene072528.t1 MTR_5g088280 29.965 287 190 4 242 525 40 318 3.52e-31 124
MS.gene072528.t1 MTR_0009s0350 28.014 282 192 5 226 501 58 334 3.97e-31 124
MS.gene072528.t1 MTR_0009s0340 28.014 282 192 5 226 501 58 334 3.97e-31 124
MS.gene072528.t1 MTR_2g436070 26.349 315 218 7 2 312 17 321 4.38e-30 122
MS.gene072528.t1 MTR_6g025590 30.653 199 119 4 210 400 29 216 7.48e-27 109
MS.gene072528.t1 MTR_0408s0030 43.182 88 50 0 417 504 36 123 5.33e-21 90.1
MS.gene072528.t1 MTR_6g024200 33.537 164 96 4 369 531 125 276 3.69e-18 85.5
MS.gene072528.t1 MTR_7g108790 30.128 156 106 3 40 194 34 187 7.33e-17 79.7
MS.gene072528.t1 MTR_4g035870 39.216 102 53 3 99 195 96 193 3.88e-15 74.7
MS.gene072528.t1 MTR_4g035880 39.604 101 52 3 99 194 96 192 4.27e-15 74.3
MS.gene072528.t1 MTR_7g102580 45.349 86 37 2 315 395 73 153 1.31e-14 72.0
MS.gene072528.t1 MTR_4g130790 27.854 219 137 8 264 473 48 254 3.03e-14 73.6
MS.gene072528.t1 MTR_4g035905 38.182 110 55 4 94 194 87 192 1.43e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072528.t1 AT3G05620 62.157 547 186 6 9 544 7 543 0.0 699
MS.gene072528.t1 AT4G33220 50.612 490 213 6 79 542 37 523 7.23e-171 494
MS.gene072528.t1 AT3G43270 49.582 478 228 5 76 542 50 525 3.24e-167 484
MS.gene072528.t1 AT4G33220 53.086 405 166 4 159 542 1 402 8.68e-152 441
MS.gene072528.t1 AT5G53370 46.217 489 238 7 72 543 106 586 7.13e-151 445
MS.gene072528.t1 AT5G53370 46.217 489 238 7 72 543 142 622 3.38e-150 444
MS.gene072528.t1 AT3G49220 43.954 521 265 6 40 543 87 597 1.62e-147 437
MS.gene072528.t1 AT3G49220 43.954 521 265 6 40 543 132 642 8.02e-147 437
MS.gene072528.t1 AT2G45220 43.063 555 253 16 2 542 6 511 3.52e-137 407
MS.gene072528.t1 AT1G23200 47.346 471 211 8 98 542 95 554 5.40e-136 406
MS.gene072528.t1 AT1G11580 44.420 448 226 5 102 538 118 553 2.63e-132 397
MS.gene072528.t1 AT1G11580 44.420 448 226 5 102 538 139 574 4.67e-132 397
MS.gene072528.t1 AT4G02300 41.767 498 258 8 62 542 50 532 4.88e-132 395
MS.gene072528.t1 AT3G05610 39.394 528 275 11 40 542 58 565 2.66e-131 397
MS.gene072528.t1 AT5G27870 37.838 518 295 6 40 542 57 562 9.63e-130 395
MS.gene072528.t1 AT2G26440 41.085 516 278 9 44 542 41 547 1.68e-128 386
MS.gene072528.t1 AT1G53830 44.731 465 231 6 102 542 125 587 5.88e-128 386
MS.gene072528.t1 AT4G02320 40.400 500 250 7 73 542 37 518 1.54e-127 383
MS.gene072528.t1 AT3G10710 43.802 484 244 10 68 542 97 561 1.70e-127 384
MS.gene072528.t1 AT2G43050 43.813 493 241 10 63 544 51 518 2.76e-127 382
MS.gene072528.t1 AT3G14310 42.227 476 235 5 102 542 122 592 3.34e-126 382
MS.gene072528.t1 AT3G60730 41.988 493 247 7 78 542 38 519 1.06e-125 378
MS.gene072528.t1 AT5G51490 43.035 481 244 10 77 542 71 536 2.69e-124 375
MS.gene072528.t1 AT4G00190 44.843 446 202 8 106 542 64 474 3.11e-123 370
MS.gene072528.t1 AT4G02330 42.259 478 233 9 106 542 96 571 6.36e-122 370
MS.gene072528.t1 AT3G47400 39.227 543 290 10 24 542 68 594 1.31e-120 368
MS.gene072528.t1 AT3G59010 43.607 438 234 6 107 542 102 528 2.11e-119 362
MS.gene072528.t1 AT5G04960 40.787 483 261 7 68 540 95 562 2.89e-118 360
MS.gene072528.t1 AT5G51500 41.372 481 252 10 77 542 75 540 5.75e-118 359
MS.gene072528.t1 AT5G04970 43.396 477 226 12 103 542 151 620 9.59e-117 358
MS.gene072528.t1 AT1G02810 40.562 498 223 8 106 542 92 577 2.52e-116 356
MS.gene072528.t1 AT4G33230 38.302 530 300 12 31 542 86 606 4.21e-116 357
MS.gene072528.t1 AT3G10720 41.632 478 243 11 98 542 141 615 1.45e-115 355
MS.gene072528.t1 AT1G53840 39.010 505 280 11 52 536 85 581 3.24e-115 353
MS.gene072528.t1 AT2G26450 40.246 487 266 12 68 542 138 611 1.05e-114 353
MS.gene072528.t1 AT2G47550 44.304 474 213 14 106 542 99 558 1.70e-114 351
MS.gene072528.t1 AT5G49180 36.932 528 306 11 31 538 46 566 2.93e-114 350
MS.gene072528.t1 AT5G20860 40.133 451 232 10 108 542 110 538 2.71e-105 326
MS.gene072528.t1 AT3G06830 35.472 530 299 12 40 540 51 566 8.17e-105 326
MS.gene072528.t1 AT4G03930 41.748 412 219 6 140 542 125 524 7.74e-104 322
MS.gene072528.t1 AT3G14300 36.821 497 292 8 52 533 471 960 3.51e-102 330
MS.gene072528.t1 AT3G10720 55.769 260 105 3 292 542 1 259 4.89e-102 308
MS.gene072528.t1 AT1G11590 42.029 414 215 6 140 542 125 524 8.37e-102 317
MS.gene072528.t1 AT3G27980 40.247 405 218 5 147 542 108 497 2.10e-97 305
MS.gene072528.t1 AT4G15980 44.380 347 180 4 206 540 355 700 4.81e-92 296
MS.gene072528.t1 AT4G15980 44.380 347 180 4 206 540 365 710 9.47e-92 296
MS.gene072528.t1 AT5G09760 36.090 532 277 17 36 530 41 546 7.08e-89 284
MS.gene072528.t1 AT5G09760 35.888 535 280 17 33 530 64 572 1.55e-88 284
MS.gene072528.t1 AT5G64640 33.272 547 279 15 38 534 91 601 5.93e-86 278
MS.gene072528.t1 AT5G20860 36.009 436 213 9 108 527 110 495 1.40e-80 261
MS.gene072528.t1 AT3G62170 29.982 557 326 14 37 542 45 588 4.83e-76 251
MS.gene072528.t1 AT2G47030 29.766 598 348 15 3 542 5 588 2.48e-75 249
MS.gene072528.t1 AT1G11370 44.487 263 132 2 219 472 29 286 1.56e-72 233
MS.gene072528.t1 AT2G47040 31.041 509 280 12 95 542 97 595 7.71e-72 241
MS.gene072528.t1 AT2G36710 34.884 301 186 4 243 536 93 390 3.72e-55 191
MS.gene072528.t1 AT5G19730 33.333 354 203 8 202 531 37 381 7.99e-54 187
MS.gene072528.t1 AT2G36700 32.153 339 207 6 198 531 13 333 1.15e-52 182
MS.gene072528.t1 AT1G05310 33.333 300 187 5 242 531 92 388 1.32e-49 176
MS.gene072528.t1 AT3G29090 34.615 312 179 7 243 537 9 312 3.39e-49 172
MS.gene072528.t1 AT3G17060 31.544 298 190 5 242 532 47 337 1.27e-48 172
MS.gene072528.t1 AT1G44980 44.149 188 103 1 219 404 54 241 5.65e-46 162
MS.gene072528.t1 AT5G47500 29.428 367 226 8 183 533 11 360 8.77e-46 165
MS.gene072528.t1 AT2G21610 31.615 291 186 5 243 531 53 332 7.45e-45 162
MS.gene072528.t1 AT2G21610 31.615 291 186 5 243 531 58 337 1.38e-44 161
MS.gene072528.t1 AT5G07430 34.021 291 178 7 247 531 73 355 8.24e-43 157
MS.gene072528.t1 AT5G18990 32.595 316 189 7 228 531 20 323 3.91e-41 151
MS.gene072528.t1 AT3G24130 30.938 320 194 9 228 531 20 328 1.09e-40 150
MS.gene072528.t1 AT5G55590 31.788 302 188 7 242 531 83 378 1.44e-38 145
MS.gene072528.t1 AT5G55590 32.927 246 150 5 242 475 83 325 3.29e-38 143
MS.gene072528.t1 AT3G49220 30.345 290 184 5 40 321 132 411 1.43e-37 144
MS.gene072528.t1 AT2G19150 31.081 296 189 5 251 538 51 339 1.29e-36 139
MS.gene072528.t1 AT5G61680 29.912 341 202 9 204 531 42 358 1.30e-36 140
MS.gene072528.t1 AT5G26810 30.547 311 190 7 242 533 35 338 3.17e-36 138
MS.gene072528.t1 AT5G07420 31.081 296 190 7 242 531 68 355 1.23e-33 131
MS.gene072528.t1 AT1G69940 27.891 294 189 7 249 531 74 355 7.55e-33 129
MS.gene072528.t1 AT2G19150 32.618 233 145 4 251 475 51 279 9.51e-33 127
MS.gene072528.t1 AT5G07410 27.551 294 190 7 249 531 74 355 1.32e-32 128
MS.gene072528.t1 AT2G47280 28.808 302 195 7 243 533 37 329 1.53e-29 119
MS.gene072528.t1 AT3G62820 27.461 193 125 5 5 194 9 189 2.98e-13 68.9
MS.gene072528.t1 AT5G62360 32.593 135 85 3 58 190 64 194 2.60e-12 66.6

Find 139 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCTCACAACCTACATATT+TGG 0.095781 7.2:-4331637 MS.gene072528:CDS
CAGACCAATCTGCATTCTTT+AGG 0.260515 7.2:-4331896 MS.gene072528:CDS
TGTTAATGTGTAGCTGTATC+TGG 0.260734 7.2:-4332002 MS.gene072528:intron
GCCTCACAACCTACATATTT+GGG 0.269773 7.2:-4331636 MS.gene072528:CDS
AGCTTAATCGCTTACCCTTT+AGG 0.279269 7.2:-4332527 MS.gene072528:CDS
AAGCTTGCATATCTTGAGTT+TGG 0.290313 7.2:+4333012 None:intergenic
AATCCAAGATAGTTATGTTT+TGG 0.298560 7.2:-4331658 MS.gene072528:CDS
CTTGATCAAATGATGGTAAA+AGG 0.313433 7.2:+4333069 None:intergenic
GTGAACTTAACACCTGTTCT+AGG 0.327842 7.2:+4331360 None:intergenic
TACGGTGAATACAGGAATTA+TGG 0.331114 7.2:-4331498 MS.gene072528:CDS
TGGACTTGGAGGGCCTGTTC+TGG 0.341206 7.2:+4332920 None:intergenic
CTACATATTTGGGGAGGCCT+TGG 0.347308 7.2:-4331626 MS.gene072528:CDS
TTCTTTAGGTGTAGCATAGA+AGG 0.349482 7.2:-4331882 MS.gene072528:CDS
GGTTCCTTAACGGCGGTTCA+TGG 0.359467 7.2:-4331386 MS.gene072528:CDS
TCAGAGCTTGCATGGTCGTT+AGG 0.365066 7.2:-4332750 MS.gene072528:CDS
TGTTTGTGAGGCATGAGTTT+TGG 0.365441 7.2:+4332958 None:intergenic
GATCTTTGTCATGTTGTTGA+TGG 0.368569 7.2:+4332845 None:intergenic
GCCACGGCTTGATGGTTTAC+CGG 0.370851 7.2:+4331933 None:intergenic
TCAGCCTCTGTCATCCATTC+AGG 0.371531 7.2:+4332450 None:intergenic
GAGCTCCTTGCAATCTTCTA+TGG 0.371794 7.2:+4332788 None:intergenic
TACCGTGAATGCGAAATCTA+TGG 0.377605 7.2:-4331819 MS.gene072528:CDS
CACGCAATGCCACGGCTTGA+TGG 0.381995 7.2:+4331925 None:intergenic
AACTAGTACTGATGAAAGTT+TGG 0.382732 7.2:-4332478 MS.gene072528:CDS
ATGTCTGAGGGAATTTCATC+TGG 0.384523 7.2:+4333035 None:intergenic
TTACCGGTCCAGCAGTGTTC+CGG 0.387620 7.2:+4331949 None:intergenic
CAGAGCTTGCATGGTCGTTA+GGG 0.395199 7.2:-4332749 MS.gene072528:CDS
TCTACCAGCGAGCGATGAAC+CGG 0.402703 7.2:+4331473 None:intergenic
ACGGTTCAGCGGTTCCTTAA+CGG 0.416002 7.2:-4331396 MS.gene072528:CDS
GATGCAGTTGTTGCGTTGGA+TGG 0.417977 7.2:-4332387 MS.gene072528:CDS
AGGCCAAAACATAACTATCT+TGG 0.418609 7.2:+4331655 None:intergenic
CCGCACTTAGCCATGCTTCG+AGG 0.428133 7.2:+4332676 None:intergenic
CAGCTCCTAGTCATAGCAAT+AGG 0.443935 7.2:-4332326 MS.gene072528:CDS
CCGCTGAACCGTAAAATAAC+CGG 0.446817 7.2:+4331407 None:intergenic
TAACACATACATGAGTAGTA+TGG 0.446857 7.2:-4331577 MS.gene072528:CDS
ATGACATTCCGGAACACTGC+TGG 0.450390 7.2:-4331957 MS.gene072528:CDS
CATGTTGTTGATGGCACCTA+TGG 0.452823 7.2:+4332854 None:intergenic
ACAGAACATTACTGATAAGC+TGG 0.453691 7.2:+4332562 None:intergenic
ATTAAAGACGCTTCTGCCGC+CGG 0.455714 7.2:-4331426 MS.gene072528:CDS
TAACAGCTTCGTTGATTGTA+CGG 0.460625 7.2:+4332352 None:intergenic
TCATGCAAGGTAGTGTTCCT+TGG 0.464611 7.2:+4332501 None:intergenic
CATCTTGAGAGTTACATTAG+TGG 0.464671 7.2:-4332603 MS.gene072528:CDS
GCAACCATGAACCGCCGTTA+AGG 0.465728 7.2:+4331382 None:intergenic
CATAACGAGCTAACCAGAAC+AGG 0.467307 7.2:-4332933 MS.gene072528:CDS
ACTTTGCATTAGACACTTTG+TGG 0.470978 7.2:-4331521 MS.gene072528:CDS
TTCCATAGATTTCGCATTCA+CGG 0.471515 7.2:+4331817 None:intergenic
GGTTCATGGTTGCCTAGAAC+AGG 0.472411 7.2:-4331372 MS.gene072528:CDS
TTGCAAGGGACATGACATTC+CGG 0.473496 7.2:-4331968 MS.gene072528:CDS
AGTTCCACTTCCATTACAAA+AGG 0.474475 7.2:-4331733 MS.gene072528:CDS
CTTTGTGGTACGGTGAATAC+AGG 0.485605 7.2:-4331506 MS.gene072528:CDS
GTGAAGCCTGTGCTTTGATG+TGG 0.491231 7.2:+4331681 None:intergenic
ATTCCGGAACACTGCTGGAC+CGG 0.491888 7.2:-4331952 MS.gene072528:CDS
AATCAAGACACATGTATTGA+AGG 0.492230 7.2:-4332645 MS.gene072528:CDS
ACAGGTGTTAAGTTCACAGC+AGG 0.494156 7.2:-4331354 MS.gene072528:CDS
ACATGTATTGAAGGGTTTGA+AGG 0.494549 7.2:-4332636 MS.gene072528:CDS
CGCTCGCTGGTAGAGTCAAA+TGG 0.495741 7.2:-4331464 MS.gene072528:CDS
AGAACTCTACTTACCAAAAG+TGG 0.497125 7.2:+4332149 None:intergenic
ACCTATGGCTTCATTGATTG+TGG 0.498951 7.2:+4332869 None:intergenic
ACATGTTATCTATGTGAAGA+AGG 0.503880 7.2:-4332301 MS.gene072528:CDS
ATGACAGAAGTTGGACTTGG+AGG 0.503881 7.2:+4332909 None:intergenic
GTAAAAGGATGAGAATGAAA+AGG 0.505964 7.2:+4333084 None:intergenic
GCAGCATTAATGACAGAAGT+TGG 0.507875 7.2:+4332900 None:intergenic
AAAGTTTGGAGTTTCCTGAA+TGG 0.509972 7.2:-4332464 MS.gene072528:CDS
AACCTCGAGGGTGGCTTGAG+TGG 0.510238 7.2:-4331551 MS.gene072528:CDS
AGTGTTCCTTGGAGACCTAA+AGG 0.513393 7.2:+4332512 None:intergenic
GTTCTAGAATATTCCTTCCA+AGG 0.522274 7.2:+4331609 None:intergenic
ATGATCGTTGGTGATGGTAT+TGG 0.525137 7.2:-4332231 MS.gene072528:CDS
GTGTTCCTTGGAGACCTAAA+GGG 0.526257 7.2:+4332513 None:intergenic
TGACAGAAGTTGGACTTGGA+GGG 0.528123 7.2:+4332910 None:intergenic
CTGGGAAGGGTTTCATTGCA+AGG 0.529923 7.2:-4331983 MS.gene072528:CDS
TTAATGACAGAAGTTGGACT+TGG 0.530794 7.2:+4332906 None:intergenic
GCATTAGACACTTTGTGGTA+CGG 0.536809 7.2:-4331516 MS.gene072528:CDS
GAGAGAACTTGATCAAATGA+TGG 0.538479 7.2:+4333062 None:intergenic
TTTGATTGCACAAGCTTGCA+TGG 0.540945 7.2:-4332991 MS.gene072528:CDS
CGAGGGTGGCTTGAGTGGCT+CGG 0.541369 7.2:-4331546 MS.gene072528:CDS
GCTCTGACACAGAGAAATCA+AGG 0.541696 7.2:+4332766 None:intergenic
TCTCTGTGTCAGAGCTTGCA+TGG 0.541979 7.2:-4332758 MS.gene072528:CDS
ATGCAGTTGTTGCGTTGGAT+GGG 0.542294 7.2:-4332386 MS.gene072528:CDS
ATCAAGACACATGTATTGAA+GGG 0.544777 7.2:-4332644 MS.gene072528:CDS
CAAGGCCTCCCCAAATATGT+AGG 0.548118 7.2:+4331627 None:intergenic
ATGTGTAGCTGTATCTGGGA+AGG 0.551122 7.2:-4331997 MS.gene072528:intron
TGGGAAGGGTTTCATTGCAA+GGG 0.552908 7.2:-4331982 MS.gene072528:CDS
ATTGCGATTGCTTGTAACAA+TGG 0.557427 7.2:+4332203 None:intergenic
GCTGGTAGAGTCAAATGGCC+TGG 0.558166 7.2:-4331459 MS.gene072528:CDS
ATATTTGGGGAGGCCTTGGA+AGG 0.559715 7.2:-4331622 MS.gene072528:CDS
TGTGTAGCTGTATCTGGGAA+GGG 0.561947 7.2:-4331996 MS.gene072528:intron
TGCAGATGCAGTTGTTGCGT+TGG 0.563751 7.2:-4332391 MS.gene072528:CDS
AAAAGTCCACATCAAAGCAC+AGG 0.565467 7.2:-4331687 MS.gene072528:CDS
ATCAGTACTAGTTTCATGCA+AGG 0.565775 7.2:+4332488 None:intergenic
AAAAGTGGCAGTTCGAAAAG+TGG 0.570595 7.2:+4332164 None:intergenic
TACACCTAAAGAATGCAGAT+TGG 0.571861 7.2:+4331892 None:intergenic
ATCGCAATTTCATGCAAGGA+TGG 0.575589 7.2:-4332188 MS.gene072528:CDS
AAGGTTACAATCACAGCTCA+AGG 0.578151 7.2:-4331714 MS.gene072528:CDS
AACATCATGATCGTTGGTGA+TGG 0.582464 7.2:-4332237 MS.gene072528:CDS
TGTGAAGAAGGGACTATACA+AGG 0.586315 7.2:-4332289 MS.gene072528:CDS
GTTAATGTGTAGCTGTATCT+GGG 0.587683 7.2:-4332001 MS.gene072528:intron
TCTTGAGTTTGGATGTCTGA+GGG 0.587826 7.2:+4333023 None:intergenic
GTTGTTGCGTTGGATGGGAG+CGG 0.587962 7.2:-4332381 MS.gene072528:CDS
AGCAATCGCAATTTCATGCA+AGG 0.589039 7.2:-4332192 MS.gene072528:CDS
CATGTTATCTATGTGAAGAA+GGG 0.590596 7.2:-4332300 MS.gene072528:CDS
GGACCCGGTTCATCGCTCGC+TGG 0.591181 7.2:-4331477 MS.gene072528:CDS
GAAAAGGAAATTCACTAGCA+AGG 0.591237 7.2:+4333100 None:intergenic
ATCACCAACGATCATGATGT+TGG 0.592216 7.2:+4332239 None:intergenic
AGTGTGCGTAAAGTGTGTCT+TGG 0.597316 7.2:+4331856 None:intergenic
ACGAAGGAAACCTCGAAGCA+TGG 0.597380 7.2:-4332686 MS.gene072528:CDS
ATGACCAACATCATGATCGT+TGG 0.598022 7.2:-4332243 MS.gene072528:CDS
ATCTTGAGTTTGGATGTCTG+AGG 0.599334 7.2:+4333022 None:intergenic
GCTCGTTATGAATGTTTGTG+AGG 0.604269 7.2:+4332946 None:intergenic
CAGAACATTACTGATAAGCT+GGG 0.605848 7.2:+4332563 None:intergenic
TTACAATCACAGCTCAAGGT+AGG 0.609803 7.2:-4331710 MS.gene072528:CDS
CTTCTATGGCAAGTTGCTCG+CGG 0.617529 7.2:+4332802 None:intergenic
GCTTACCCTTTAGGTCTCCA+AGG 0.618807 7.2:-4332518 MS.gene072528:CDS
CATGGTCGTTAGGGGAGATG+AGG 0.619966 7.2:-4332740 MS.gene072528:CDS
ACTTGCCATAGAAGATTGCA+AGG 0.620029 7.2:-4332793 MS.gene072528:CDS
CCCCAAATATGTAGGTTGTG+AGG 0.623360 7.2:+4331635 None:intergenic
GTAGTATGGTTCAACCTCGA+GGG 0.629470 7.2:-4331563 MS.gene072528:CDS
AGTAGTATGGTTCAACCTCG+AGG 0.630686 7.2:-4331564 MS.gene072528:CDS
TGAATCGACACGCAATGCCA+CGG 0.630967 7.2:+4331917 None:intergenic
GACAGAACTGCGCAGTACGA+AGG 0.633449 7.2:-4332702 MS.gene072528:CDS
GAGATGAGGAGAATTCGAGC+CGG 0.635377 7.2:-4332726 MS.gene072528:CDS
CTACCAGCGAGCGATGAACC+GGG 0.640025 7.2:+4331474 None:intergenic
TGTCTGAGGGAATTTCATCT+GGG 0.640715 7.2:+4333036 None:intergenic
GTACTGCGCAGTTCTGTCGC+CGG 0.644383 7.2:+4332707 None:intergenic
CCTCACAACCTACATATTTG+GGG 0.650108 7.2:-4331635 MS.gene072528:CDS
AGAGCTTGCATGGTCGTTAG+GGG 0.652304 7.2:-4332748 MS.gene072528:CDS
TGTCTCCTATTGCTATGACT+AGG 0.654035 7.2:+4332321 None:intergenic
GTATGGTTCAACCTCGAGGG+TGG 0.654064 7.2:-4331560 MS.gene072528:CDS
TCTTTAATGACATGATAACC+AGG 0.655480 7.2:+4331441 None:intergenic
CCTCGAAGCATGGCTAAGTG+CGG 0.658255 7.2:-4332676 MS.gene072528:CDS
ACCACAATCAATGAAGCCAT+AGG 0.663784 7.2:-4332870 MS.gene072528:CDS
ACCGGTAAACCATCAAGCCG+TGG 0.664465 7.2:-4331934 MS.gene072528:CDS
GAATACAGGAATTATGGACC+CGG 0.671183 7.2:-4331492 MS.gene072528:CDS
CACAACCTACATATTTGGGG+AGG 0.675764 7.2:-4331632 MS.gene072528:CDS
CTACTTAAATCTAAGCCGCA+CGG 0.678224 7.2:-4332420 MS.gene072528:CDS
AGCCACTCAAGCCACCCTCG+AGG 0.711855 7.2:+4331549 None:intergenic
GTTCAGCGGTTCCTTAACGG+CGG 0.714803 7.2:-4331393 MS.gene072528:CDS
CAGGTGTTAAGTTCACAGCA+GGG 0.718376 7.2:-4331353 MS.gene072528:CDS
CTGAACCGTAAAATAACCGG+CGG 0.728593 7.2:+4331410 None:intergenic
GTTTCCTGAATGGATGACAG+AGG 0.756653 7.2:-4332454 MS.gene072528:CDS
GCATCTGCAATCTTACCGTG+CGG 0.785544 7.2:+4332405 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TGAATTGGTATATACTGAAT+TGG - chr7.2:4332406-4332425 MS.gene072528:CDS 25.0%
!! AATCCAAGATAGTTATGTTT+TGG - chr7.2:4332787-4332806 MS.gene072528:CDS 25.0%
AATCAAGACACATGTATTGA+AGG - chr7.2:4331800-4331819 MS.gene072528:CDS 30.0%
ACATGTTATCTATGTGAAGA+AGG - chr7.2:4332144-4332163 MS.gene072528:intron 30.0%
ATCAAGACACATGTATTGAA+GGG - chr7.2:4331801-4331820 MS.gene072528:CDS 30.0%
ATTCCCAAAAATGAAGTCTA+TGG + chr7.2:4332654-4332673 None:intergenic 30.0%
CATGTTATCTATGTGAAGAA+GGG - chr7.2:4332145-4332164 MS.gene072528:intron 30.0%
CTTGATCAAATGATGGTAAA+AGG + chr7.2:4331379-4331398 None:intergenic 30.0%
GTAAAAGGATGAGAATGAAA+AGG + chr7.2:4331364-4331383 None:intergenic 30.0%
TAACACATACATGAGTAGTA+TGG - chr7.2:4332868-4332887 MS.gene072528:CDS 30.0%
TCTTTAATGACATGATAACC+AGG + chr7.2:4333007-4333026 None:intergenic 30.0%
! ACACACTCTTTTCAATATGT+AGG + chr7.2:4332379-4332398 None:intergenic 30.0%
! GTGATTGTAACCTTTTGTAA+TGG + chr7.2:4332725-4332744 None:intergenic 30.0%
!! AACTAGTACTGATGAAAGTT+TGG - chr7.2:4331967-4331986 MS.gene072528:CDS 30.0%
!! ATAGACTTCATTTTTGGGAA+TGG - chr7.2:4332653-4332672 MS.gene072528:CDS 30.0%
!! GAACCATAGACTTCATTTTT+GGG - chr7.2:4332648-4332667 MS.gene072528:CDS 30.0%
AACAGTATTTCTCTAGCGTA+AGG - chr7.2:4332324-4332343 MS.gene072528:CDS 35.0%
AAGCTTGCATATCTTGAGTT+TGG + chr7.2:4331436-4331455 None:intergenic 35.0%
ACAGAACATTACTGATAAGC+TGG + chr7.2:4331886-4331905 None:intergenic 35.0%
ACATGTATTGAAGGGTTTGA+AGG - chr7.2:4331809-4331828 MS.gene072528:CDS 35.0%
ACTTTGCATTAGACACTTTG+TGG - chr7.2:4332924-4332943 MS.gene072528:CDS 35.0%
AGAACTCTACTTACCAAAAG+TGG + chr7.2:4332299-4332318 None:intergenic 35.0%
AGGCCAAAACATAACTATCT+TGG + chr7.2:4332793-4332812 None:intergenic 35.0%
AGTTCCACTTCCATTACAAA+AGG - chr7.2:4332712-4332731 MS.gene072528:CDS 35.0%
ATTGCGATTGCTTGTAACAA+TGG + chr7.2:4332245-4332264 None:intergenic 35.0%
CAGAACATTACTGATAAGCT+GGG + chr7.2:4331885-4331904 None:intergenic 35.0%
CATCTTGAGAGTTACATTAG+TGG - chr7.2:4331842-4331861 MS.gene072528:CDS 35.0%
GAAAAGGAAATTCACTAGCA+AGG + chr7.2:4331348-4331367 None:intergenic 35.0%
GAGAGAACTTGATCAAATGA+TGG + chr7.2:4331386-4331405 None:intergenic 35.0%
GAGTGTGTTAGAGAATGAAT+TGG - chr7.2:4332391-4332410 MS.gene072528:CDS 35.0%
GATCTTTGTCATGTTGTTGA+TGG + chr7.2:4331603-4331622 None:intergenic 35.0%
GTTAATGTGTAGCTGTATCT+GGG - chr7.2:4332444-4332463 MS.gene072528:CDS 35.0%
TACACCTAAAGAATGCAGAT+TGG + chr7.2:4332556-4332575 None:intergenic 35.0%
TACGGTGAATACAGGAATTA+TGG - chr7.2:4332947-4332966 MS.gene072528:CDS 35.0%
TGTTAATGTGTAGCTGTATC+TGG - chr7.2:4332443-4332462 MS.gene072528:CDS 35.0%
TTAATGACAGAAGTTGGACT+TGG + chr7.2:4331542-4331561 None:intergenic 35.0%
TTCCATAGATTTCGCATTCA+CGG + chr7.2:4332631-4332650 None:intergenic 35.0%
TTCTTTAGGTGTAGCATAGA+AGG - chr7.2:4332563-4332582 MS.gene072528:CDS 35.0%
! AAAGTTTGGAGTTTCCTGAA+TGG - chr7.2:4331981-4332000 MS.gene072528:CDS 35.0%
! ATCAGTACTAGTTTCATGCA+AGG + chr7.2:4331960-4331979 None:intergenic 35.0%
! GGAACCATAGACTTCATTTT+TGG - chr7.2:4332647-4332666 MS.gene072528:CDS 35.0%
! TAACAGCTTCGTTGATTGTA+CGG + chr7.2:4332096-4332115 None:intergenic 35.0%
!! GTAACCTTTTGTAATGGAAG+TGG + chr7.2:4332719-4332738 None:intergenic 35.0%
!! GTTCTAGAATATTCCTTCCA+AGG + chr7.2:4332839-4332858 None:intergenic 35.0%
AAAAGTCCACATCAAAGCAC+AGG - chr7.2:4332758-4332777 MS.gene072528:CDS 40.0%
AAAAGTGGCAGTTCGAAAAG+TGG + chr7.2:4332284-4332303 None:intergenic 40.0%
AAGGTTACAATCACAGCTCA+AGG - chr7.2:4332731-4332750 MS.gene072528:CDS 40.0%
ACCACAATCAATGAAGCCAT+AGG - chr7.2:4331575-4331594 MS.gene072528:CDS 40.0%
ACTTGCCATAGAAGATTGCA+AGG - chr7.2:4331652-4331671 MS.gene072528:CDS 40.0%
AGCAATCGCAATTTCATGCA+AGG - chr7.2:4332253-4332272 MS.gene072528:CDS 40.0%
AGCTTAATCGCTTACCCTTT+AGG - chr7.2:4331918-4331937 MS.gene072528:CDS 40.0%
ATCACCAACGATCATGATGT+TGG + chr7.2:4332209-4332228 None:intergenic 40.0%
ATCGCAATTTCATGCAAGGA+TGG - chr7.2:4332257-4332276 MS.gene072528:CDS 40.0%
ATCTTGAGTTTGGATGTCTG+AGG + chr7.2:4331426-4331445 None:intergenic 40.0%
ATGACCAACATCATGATCGT+TGG - chr7.2:4332202-4332221 MS.gene072528:CDS 40.0%
ATGTCTGAGGGAATTTCATC+TGG + chr7.2:4331413-4331432 None:intergenic 40.0%
CAGACCAATCTGCATTCTTT+AGG - chr7.2:4332549-4332568 MS.gene072528:CDS 40.0%
CCTCACAACCTACATATTTG+GGG - chr7.2:4332810-4332829 MS.gene072528:CDS 40.0%
CTACTTAAATCTAAGCCGCA+CGG - chr7.2:4332025-4332044 MS.gene072528:intron 40.0%
GAATACAGGAATTATGGACC+CGG - chr7.2:4332953-4332972 MS.gene072528:CDS 40.0%
GCAGCATTAATGACAGAAGT+TGG + chr7.2:4331548-4331567 None:intergenic 40.0%
GCATTAGACACTTTGTGGTA+CGG - chr7.2:4332929-4332948 MS.gene072528:CDS 40.0%
GCCTCACAACCTACATATTT+GGG - chr7.2:4332809-4332828 MS.gene072528:CDS 40.0%
GCTCGTTATGAATGTTTGTG+AGG + chr7.2:4331502-4331521 None:intergenic 40.0%
GTGAACTTAACACCTGTTCT+AGG + chr7.2:4333088-4333107 None:intergenic 40.0%
TACCGTGAATGCGAAATCTA+TGG - chr7.2:4332626-4332645 MS.gene072528:CDS 40.0%
TCTTGAGTTTGGATGTCTGA+GGG + chr7.2:4331425-4331444 None:intergenic 40.0%
TGTCTCCTATTGCTATGACT+AGG + chr7.2:4332127-4332146 None:intergenic 40.0%
TGTCTGAGGGAATTTCATCT+GGG + chr7.2:4331412-4331431 None:intergenic 40.0%
TGTGAAGAAGGGACTATACA+AGG - chr7.2:4332156-4332175 MS.gene072528:intron 40.0%
TTACAATCACAGCTCAAGGT+AGG - chr7.2:4332735-4332754 MS.gene072528:CDS 40.0%
TTTGATTGCACAAGCTTGCA+TGG - chr7.2:4331454-4331473 MS.gene072528:CDS 40.0%
! AACATCATGATCGTTGGTGA+TGG - chr7.2:4332208-4332227 MS.gene072528:CDS 40.0%
! ACCTATGGCTTCATTGATTG+TGG + chr7.2:4331579-4331598 None:intergenic 40.0%
! TGTTTGTGAGGCATGAGTTT+TGG + chr7.2:4331490-4331509 None:intergenic 40.0%
!! ATGATCGTTGGTGATGGTAT+TGG - chr7.2:4332214-4332233 MS.gene072528:CDS 40.0%
!!! ACTTTTCGAACTGCCACTTT+TGG - chr7.2:4332283-4332302 MS.gene072528:CDS 40.0%
ACAGGTGTTAAGTTCACAGC+AGG - chr7.2:4333091-4333110 MS.gene072528:CDS 45.0%
AGTAGTATGGTTCAACCTCG+AGG - chr7.2:4332881-4332900 MS.gene072528:CDS 45.0%
AGTGTGCGTAAAGTGTGTCT+TGG + chr7.2:4332592-4332611 None:intergenic 45.0%
AGTGTTCCTTGGAGACCTAA+AGG + chr7.2:4331936-4331955 None:intergenic 45.0%
ATGACAGAAGTTGGACTTGG+AGG + chr7.2:4331539-4331558 None:intergenic 45.0%
ATGCAGTTGTTGCGTTGGAT+GGG - chr7.2:4332059-4332078 MS.gene072528:intron 45.0%
ATGTGTAGCTGTATCTGGGA+AGG - chr7.2:4332448-4332467 MS.gene072528:CDS 45.0%
CACAACCTACATATTTGGGG+AGG - chr7.2:4332813-4332832 MS.gene072528:CDS 45.0%
CAGCTCCTAGTCATAGCAAT+AGG - chr7.2:4332119-4332138 MS.gene072528:intron 45.0%
CAGGTGTTAAGTTCACAGCA+GGG - chr7.2:4333092-4333111 MS.gene072528:CDS 45.0%
CATAACGAGCTAACCAGAAC+AGG - chr7.2:4331512-4331531 MS.gene072528:CDS 45.0%
CCCCAAATATGTAGGTTGTG+AGG + chr7.2:4332813-4332832 None:intergenic 45.0%
CCGCTGAACCGTAAAATAAC+CGG + chr7.2:4333041-4333060 None:intergenic 45.0%
CTGAACCGTAAAATAACCGG+CGG + chr7.2:4333038-4333057 None:intergenic 45.0%
CTTTGTGGTACGGTGAATAC+AGG - chr7.2:4332939-4332958 MS.gene072528:CDS 45.0%
GAGCTCCTTGCAATCTTCTA+TGG + chr7.2:4331660-4331679 None:intergenic 45.0%
GCTCTGACACAGAGAAATCA+AGG + chr7.2:4331682-4331701 None:intergenic 45.0%
GGCCTCACAACCTACATATT+TGG - chr7.2:4332808-4332827 MS.gene072528:CDS 45.0%
GTAGTATGGTTCAACCTCGA+GGG - chr7.2:4332882-4332901 MS.gene072528:CDS 45.0%
GTGTTCCTTGGAGACCTAAA+GGG + chr7.2:4331935-4331954 None:intergenic 45.0%
GTTTCCTGAATGGATGACAG+AGG - chr7.2:4331991-4332010 MS.gene072528:CDS 45.0%
TCATGCAAGGTAGTGTTCCT+TGG + chr7.2:4331947-4331966 None:intergenic 45.0%
TGACAGAAGTTGGACTTGGA+GGG + chr7.2:4331538-4331557 None:intergenic 45.0%
TGGGAAGGGTTTCATTGCAA+GGG - chr7.2:4332463-4332482 MS.gene072528:CDS 45.0%
TGTGTAGCTGTATCTGGGAA+GGG - chr7.2:4332449-4332468 MS.gene072528:CDS 45.0%
TTGCAAGGGACATGACATTC+CGG - chr7.2:4332477-4332496 MS.gene072528:CDS 45.0%
!! CATGTTGTTGATGGCACCTA+TGG + chr7.2:4331594-4331613 None:intergenic 45.0%
!! CCGGTTATTTTACGGTTCAG+CGG - chr7.2:4333038-4333057 MS.gene072528:CDS 45.0%
!! TTCTGCCGCCGGTTATTTTA+CGG - chr7.2:4333030-4333049 MS.gene072528:CDS 45.0%
ACGAAGGAAACCTCGAAGCA+TGG - chr7.2:4331759-4331778 MS.gene072528:CDS 50.0%
ACGGTTCAGCGGTTCCTTAA+CGG - chr7.2:4333049-4333068 MS.gene072528:CDS 50.0%
AGAGCTTGCATGGTCGTTAG+GGG - chr7.2:4331697-4331716 MS.gene072528:CDS 50.0%
ATATTTGGGGAGGCCTTGGA+AGG - chr7.2:4332823-4332842 MS.gene072528:CDS 50.0%
ATGACATTCCGGAACACTGC+TGG - chr7.2:4332488-4332507 MS.gene072528:CDS 50.0%
ATTAAAGACGCTTCTGCCGC+CGG - chr7.2:4333019-4333038 MS.gene072528:CDS 50.0%
CAAGGCCTCCCCAAATATGT+AGG + chr7.2:4332821-4332840 None:intergenic 50.0%
CAGAGCTTGCATGGTCGTTA+GGG - chr7.2:4331696-4331715 MS.gene072528:CDS 50.0%
CTACATATTTGGGGAGGCCT+TGG - chr7.2:4332819-4332838 MS.gene072528:CDS 50.0%
CTGGGAAGGGTTTCATTGCA+AGG - chr7.2:4332462-4332481 MS.gene072528:CDS 50.0%
CTTCTATGGCAAGTTGCTCG+CGG + chr7.2:4331646-4331665 None:intergenic 50.0%
GAGATGAGGAGAATTCGAGC+CGG - chr7.2:4331719-4331738 MS.gene072528:CDS 50.0%
GATGCAGTTGTTGCGTTGGA+TGG - chr7.2:4332058-4332077 MS.gene072528:intron 50.0%
GCATCTGCAATCTTACCGTG+CGG + chr7.2:4332043-4332062 None:intergenic 50.0%
GCTTACCCTTTAGGTCTCCA+AGG - chr7.2:4331927-4331946 MS.gene072528:CDS 50.0%
GGTTCATGGTTGCCTAGAAC+AGG - chr7.2:4333073-4333092 MS.gene072528:CDS 50.0%
GTGAAGCCTGTGCTTTGATG+TGG + chr7.2:4332767-4332786 None:intergenic 50.0%
TCAGAGCTTGCATGGTCGTT+AGG - chr7.2:4331695-4331714 MS.gene072528:CDS 50.0%
TCAGCCTCTGTCATCCATTC+AGG + chr7.2:4331998-4332017 None:intergenic 50.0%
TCTCTGTGTCAGAGCTTGCA+TGG - chr7.2:4331687-4331706 MS.gene072528:CDS 50.0%
TGAATCGACACGCAATGCCA+CGG + chr7.2:4332531-4332550 None:intergenic 50.0%
TGCAGATGCAGTTGTTGCGT+TGG - chr7.2:4332054-4332073 MS.gene072528:intron 50.0%
ACCGGTAAACCATCAAGCCG+TGG - chr7.2:4332511-4332530 MS.gene072528:CDS 55.0%
ATTCCGGAACACTGCTGGAC+CGG - chr7.2:4332493-4332512 MS.gene072528:CDS 55.0%
CATGGTCGTTAGGGGAGATG+AGG - chr7.2:4331705-4331724 MS.gene072528:CDS 55.0%
CCTCGAAGCATGGCTAAGTG+CGG - chr7.2:4331769-4331788 MS.gene072528:CDS 55.0%
CGCTCGCTGGTAGAGTCAAA+TGG - chr7.2:4332981-4333000 MS.gene072528:CDS 55.0%
GACAGAACTGCGCAGTACGA+AGG - chr7.2:4331743-4331762 MS.gene072528:CDS 55.0%
GCAACCATGAACCGCCGTTA+AGG + chr7.2:4333066-4333085 None:intergenic 55.0%
GCTGGTAGAGTCAAATGGCC+TGG - chr7.2:4332986-4333005 MS.gene072528:CDS 55.0%
GGTTCCTTAACGGCGGTTCA+TGG - chr7.2:4333059-4333078 MS.gene072528:CDS 55.0%
GTATGGTTCAACCTCGAGGG+TGG - chr7.2:4332885-4332904 MS.gene072528:CDS 55.0%
GTTCAGCGGTTCCTTAACGG+CGG - chr7.2:4333052-4333071 MS.gene072528:CDS 55.0%
GTTGTTGCGTTGGATGGGAG+CGG - chr7.2:4332064-4332083 MS.gene072528:intron 55.0%
TCTACCAGCGAGCGATGAAC+CGG + chr7.2:4332975-4332994 None:intergenic 55.0%
TTACCGGTCCAGCAGTGTTC+CGG + chr7.2:4332499-4332518 None:intergenic 55.0%
! GCCACGGCTTGATGGTTTAC+CGG + chr7.2:4332515-4332534 None:intergenic 55.0%
AACCTCGAGGGTGGCTTGAG+TGG - chr7.2:4332894-4332913 MS.gene072528:CDS 60.0%
CACGCAATGCCACGGCTTGA+TGG + chr7.2:4332523-4332542 None:intergenic 60.0%
CCGCACTTAGCCATGCTTCG+AGG + chr7.2:4331772-4331791 None:intergenic 60.0%
CTACCAGCGAGCGATGAACC+GGG + chr7.2:4332974-4332993 None:intergenic 60.0%
GTACTGCGCAGTTCTGTCGC+CGG + chr7.2:4331741-4331760 None:intergenic 60.0%
TGGACTTGGAGGGCCTGTTC+TGG + chr7.2:4331528-4331547 None:intergenic 60.0%
AGCCACTCAAGCCACCCTCG+AGG + chr7.2:4332899-4332918 None:intergenic 65.0%
CGAGGGTGGCTTGAGTGGCT+CGG - chr7.2:4332899-4332918 MS.gene072528:CDS 65.0%
GGACCCGGTTCATCGCTCGC+TGG - chr7.2:4332968-4332987 MS.gene072528:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 4331341 4333126 4331341 ID=MS.gene072528
chr7.2 mRNA 4331341 4333126 4331341 ID=MS.gene072528.t1;Parent=MS.gene072528
chr7.2 exon 4332163 4333126 4332163 ID=MS.gene072528.t1.exon1;Parent=MS.gene072528.t1
chr7.2 CDS 4332163 4333126 4332163 ID=cds.MS.gene072528.t1;Parent=MS.gene072528.t1
chr7.2 exon 4331341 4332011 4331341 ID=MS.gene072528.t1.exon2;Parent=MS.gene072528.t1
chr7.2 CDS 4331341 4332011 4331341 ID=cds.MS.gene072528.t1;Parent=MS.gene072528.t1
Gene Sequence

>MS.gene072528

ATGGCCTTGCTAGTGAATTTCCTTTTCATTCTCATCCTTTTACCATCATTTGATCAAGTTCTCTCATTCCCAGATGAAATTCCCTCAGACATCCAAACTCAAGATATGCAAGCTTTGATTGCACAAGCTTGCATGGATATTGAAAACCAAAACTCATGCCTCACAAACATTCATAACGAGCTAACCAGAACAGGCCCTCCAAGTCCAACTTCTGTCATTAATGCTGCACTTAGAACCACAATCAATGAAGCCATAGGTGCCATCAACAACATGACAAAGATCAGTACATTCTCTGTTAATAACCGCGAGCAACTTGCCATAGAAGATTGCAAGGAGCTCCTTGATTTCTCTGTGTCAGAGCTTGCATGGTCGTTAGGGGAGATGAGGAGAATTCGAGCCGGCGACAGAACTGCGCAGTACGAAGGAAACCTCGAAGCATGGCTAAGTGCGGCGCTTAGCAATCAAGACACATGTATTGAAGGGTTTGAAGGCACTGATAGACATCTTGAGAGTTACATTAGTGGAAGCTTAACACAAGTAACCCAGCTTATCAGTAATGTTCTGTCTTTGTACACTCAGCTTAATCGCTTACCCTTTAGGTCTCCAAGGAACACTACCTTGCATGAAACTAGTACTGATGAAAGTTTGGAGTTTCCTGAATGGATGACAGAGGCTGATCAAGAGCTACTTAAATCTAAGCCGCACGGTAAGATTGCAGATGCAGTTGTTGCGTTGGATGGGAGCGGTCAGTACCGTACAATCAACGAAGCTGTTAATGCAGCTCCTAGTCATAGCAATAGGAGACATGTTATCTATGTGAAGAAGGGACTATACAAGGAGAATATTGATATGAAGAAGAAGATGACCAACATCATGATCGTTGGTGATGGTATTGGTCAAACCATTGTTACAAGCAATCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACTTTTGGTAAGTAGAGTTCTTATTTAACAGTATTTCTCTAGCGTAAGGAATTGAAATCTGTGTTTTTTGTACTATCACCTACATATTGAAAAGAGTGTGTTAGAGAATGAATTGGTATATACTGAATTGGTTGATAATTTGAAATGTTAATGTGTAGCTGTATCTGGGAAGGGTTTCATTGCAAGGGACATGACATTCCGGAACACTGCTGGACCGGTAAACCATCAAGCCGTGGCATTGCGTGTCGATTCAGACCAATCTGCATTCTTTAGGTGTAGCATAGAAGGAAACCAAGACACACTTTACGCACACTCACTGAGACAGTTCTACCGTGAATGCGAAATCTATGGAACCATAGACTTCATTTTTGGGAATGGAGCTGCTGTGCTACAAAACTGCAAGATATACACAAGAGTTCCACTTCCATTACAAAAGGTTACAATCACAGCTCAAGGTAGGAAAAGTCCACATCAAAGCACAGGCTTCACAATCCAAGATAGTTATGTTTTGGCCTCACAACCTACATATTTGGGGAGGCCTTGGAAGGAATATTCTAGAACAGTTTACATTAACACATACATGAGTAGTATGGTTCAACCTCGAGGGTGGCTTGAGTGGCTCGGTAACTTTGCATTAGACACTTTGTGGTACGGTGAATACAGGAATTATGGACCCGGTTCATCGCTCGCTGGTAGAGTCAAATGGCCTGGTTATCATGTCATTAAAGACGCTTCTGCCGCCGGTTATTTTACGGTTCAGCGGTTCCTTAACGGCGGTTCATGGTTGCCTAGAACAGGTGTTAAGTTCACAGCAGGGCTAAGCAATTGA
Protein sequence

>MS.gene072528.t1

MALLVNFLFILILLPSFDQVLSFPDEIPSDIQTQDMQALIAQACMDIENQNSCLTNIHNELTRTGPPSPTSVINAALRTTINEAIGAINNMTKISTFSVNNREQLAIEDCKELLDFSVSELAWSLGEMRRIRAGDRTAQYEGNLEAWLSAALSNQDTCIEGFEGTDRHLESYISGSLTQVTQLISNVLSLYTQLNRLPFRSPRNTTLHETSTDESLEFPEWMTEADQELLKSKPHGKIADAVVALDGSGQYRTINEAVNAAPSHSNRRHVIYVKKGLYKENIDMKKKMTNIMIVGDGIGQTIVTSNRNFMQGWTTFRTATFAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFFRCSIEGNQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYVLASQPTYLGRPWKEYSRTVYINTYMSSMVQPRGWLEWLGNFALDTLWYGEYRNYGPGSSLAGRVKWPGYHVIKDASAAGYFTVQRFLNGGSWLPRTGVKFTAGLSN