AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072534

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072534.t1 MTR_7g112490 96.286 377 14 0 1 377 19 395 0.0 763
MS.gene072534.t1 MTR_7g112490 96.286 377 14 0 1 377 1 377 0.0 761
MS.gene072534.t1 MTR_1g083690 76.519 362 74 4 1 362 1 351 0.0 555
MS.gene072534.t1 MTR_4g120410 59.669 362 137 2 1 362 1 353 1.08e-164 465
MS.gene072534.t1 MTR_2g435550 60.331 363 134 3 1 362 1 354 1.54e-164 465
MS.gene072534.t1 MTR_2g435550 63.772 334 112 2 29 362 16 340 5.84e-163 460
MS.gene072534.t1 MTR_2g435550 59.475 343 129 3 1 342 1 334 2.58e-152 435
MS.gene072534.t1 MTR_7g080170 50.898 334 134 4 52 361 57 384 8.06e-111 333
MS.gene072534.t1 MTR_7g021530 49.231 325 150 5 50 362 47 368 9.31e-106 317
MS.gene072534.t1 MTR_7g021530 49.231 325 150 5 50 362 88 409 3.79e-105 317
MS.gene072534.t1 MTR_8g017240 50.799 313 137 5 50 362 45 340 3.46e-103 309
MS.gene072534.t1 MTR_4g037470 45.370 324 170 3 52 370 58 379 2.44e-101 308
MS.gene072534.t1 MTR_2g090190 46.395 319 165 3 55 369 55 371 1.58e-98 301
MS.gene072534.t1 MTR_4g037470 44.144 333 170 4 52 370 58 388 3.26e-98 300
MS.gene072534.t1 MTR_7g070510 44.172 326 174 3 52 371 53 376 4.82e-97 296
MS.gene072534.t1 MTR_7g021530 49.320 294 134 5 81 362 28 318 3.01e-93 283
MS.gene072534.t1 MTR_4g013295 43.506 308 167 3 56 362 43 344 1.90e-90 276
MS.gene072534.t1 MTR_7g021530 48.913 276 127 4 50 313 47 320 1.73e-87 267
MS.gene072534.t1 MTR_7g021530 48.913 276 127 4 50 313 88 361 6.10e-87 267
MS.gene072534.t1 MTR_7g080170 48.936 282 114 4 104 361 1 276 2.30e-82 257
MS.gene072534.t1 MTR_1g016620 42.671 307 157 5 60 362 38 329 6.34e-75 236
MS.gene072534.t1 MTR_7g021530 41.232 211 110 4 50 248 47 255 2.12e-47 162
MS.gene072534.t1 MTR_7g021530 41.232 211 110 4 50 248 88 296 7.81e-47 162
MS.gene072534.t1 MTR_6g087000 28.571 329 171 6 62 362 90 382 5.27e-33 131
MS.gene072534.t1 MTR_6g087000 27.179 390 210 8 11 362 29 382 6.34e-33 130
MS.gene072534.t1 MTR_4g118340 26.885 305 171 6 73 359 68 338 4.60e-29 116
MS.gene072534.t1 MTR_2g020970 28.358 335 180 9 56 364 44 344 4.98e-29 115
MS.gene072534.t1 MTR_2g020970 28.443 334 179 9 57 364 45 344 8.99e-29 116
MS.gene072534.t1 MTR_3g105730 30.924 249 118 9 93 338 67 264 4.41e-25 103
MS.gene072534.t1 MTR_3g105730 30.400 250 118 9 93 338 45 242 5.16e-25 103
MS.gene072534.t1 MTR_1g014640 31.325 249 117 9 93 338 110 307 9.54e-25 103
MS.gene072534.t1 MTR_1g013400 31.325 249 117 9 93 338 110 307 9.54e-25 103
MS.gene072534.t1 MTR_2g078760 33.455 275 126 12 88 361 35 253 6.03e-24 99.8
MS.gene072534.t1 MTR_1g115570 27.463 335 174 15 39 366 71 343 1.88e-23 100
MS.gene072534.t1 MTR_2g078760 33.455 275 126 12 88 361 114 332 1.99e-23 100
MS.gene072534.t1 MTR_2g008850 39.888 178 82 8 183 359 79 232 4.76e-23 96.7
MS.gene072534.t1 MTR_2g008850 39.888 178 82 8 183 359 125 278 1.75e-22 96.3
MS.gene072534.t1 MTR_3g068200 29.483 329 182 11 3 321 33 321 4.09e-22 97.1
MS.gene072534.t1 MTR_6g081850 31.086 267 129 8 94 347 82 306 9.21e-22 95.1
MS.gene072534.t1 MTR_3g074610 38.916 203 96 10 159 359 103 279 1.65e-21 93.6
MS.gene072534.t1 MTR_5g009370 31.295 278 131 11 57 323 52 280 4.15e-21 93.6
MS.gene072534.t1 MTR_5g063940 39.326 178 83 8 183 359 79 232 4.42e-21 91.3
MS.gene072534.t1 MTR_5g063940 39.326 178 83 8 183 359 126 279 8.82e-21 91.7
MS.gene072534.t1 MTR_1g050520 26.923 312 172 11 64 369 391 652 8.99e-21 94.4
MS.gene072534.t1 MTR_4g094208 36.019 211 104 11 154 359 90 274 1.46e-20 90.9
MS.gene072534.t1 MTR_8g463130 31.868 273 123 13 94 362 69 282 2.00e-20 90.5
MS.gene072534.t1 MTR_8g463130 31.868 273 123 13 94 362 41 254 2.05e-20 90.1
MS.gene072534.t1 MTR_4g094542 32.683 205 111 10 158 361 186 364 4.85e-20 90.9
MS.gene072534.t1 MTR_5g080680 29.134 254 146 7 68 321 109 328 1.59e-19 89.7
MS.gene072534.t1 MTR_4g125810 31.739 230 120 9 91 320 253 445 4.93e-19 89.0
MS.gene072534.t1 MTR_3g104710 29.057 265 143 8 59 320 262 484 2.07e-18 87.0
MS.gene072534.t1 MTR_3g091060 28.041 296 156 9 65 359 99 338 3.71e-18 85.5
MS.gene072534.t1 MTR_3g464700 30.000 260 131 10 62 320 89 298 1.49e-17 83.2
MS.gene072534.t1 MTR_3g464650 28.664 307 155 13 62 361 65 314 2.42e-17 82.4
MS.gene072534.t1 MTR_1g116260 27.414 321 151 14 91 367 80 362 6.82e-17 81.6
MS.gene072534.t1 MTR_4g116420 27.018 285 156 11 85 364 118 355 5.52e-16 79.0
MS.gene072534.t1 MTR_8g102550 30.870 230 118 8 91 320 152 340 7.29e-16 79.0
MS.gene072534.t1 MTR_1g015110 30.901 233 124 9 91 320 290 488 7.88e-16 79.3
MS.gene072534.t1 MTR_3g107880 28.125 288 135 13 91 364 63 292 8.14e-16 77.8
MS.gene072534.t1 MTR_3g107880 28.125 288 135 13 91 364 121 350 9.74e-16 78.2
MS.gene072534.t1 MTR_3g107880 28.125 288 135 13 91 364 120 349 1.09e-15 78.2
MS.gene072534.t1 MTR_5g071550 26.861 309 174 12 54 361 117 374 1.17e-15 78.2
MS.gene072534.t1 MTR_8g074930 30.144 209 94 10 193 361 45 241 1.51e-15 76.6
MS.gene072534.t1 MTR_1g086350 28.571 238 120 11 91 321 118 312 2.66e-15 77.0
MS.gene072534.t1 MTR_2g040500 31.950 241 124 9 91 319 267 479 2.82e-15 77.8
MS.gene072534.t1 MTR_1g086350 28.571 238 120 11 91 321 102 296 2.84e-15 77.0
MS.gene072534.t1 MTR_3g032660 26.586 331 153 13 88 369 65 354 3.42e-15 77.0
MS.gene072534.t1 MTR_8g074930 30.137 219 101 10 183 361 147 353 3.74e-15 76.6
MS.gene072534.t1 MTR_3g032700 26.586 331 153 13 88 369 65 354 4.50e-15 76.6
MS.gene072534.t1 MTR_1g067210 26.603 312 153 10 91 362 76 351 8.66e-15 75.5
MS.gene072534.t1 MTR_1g028300 40.164 122 56 4 200 321 226 330 1.37e-14 75.1
MS.gene072534.t1 MTR_1g086350 33.793 145 72 5 182 321 85 210 3.25e-14 72.8
MS.gene072534.t1 MTR_1g014190 26.070 257 143 7 91 321 52 287 4.20e-14 73.2
MS.gene072534.t1 MTR_1g014190 26.070 257 143 7 91 321 90 325 6.57e-14 72.8
MS.gene072534.t1 MTR_3g105880 27.799 259 136 10 91 321 52 287 9.68e-14 72.0
MS.gene072534.t1 MTR_1g112840 32.195 205 91 9 195 361 161 355 1.57e-13 71.6
MS.gene072534.t1 MTR_4g123080 24.768 323 178 12 58 363 54 328 1.77e-13 71.2
MS.gene072534.t1 MTR_4g123080 24.768 323 178 12 58 363 72 346 1.84e-13 71.6
MS.gene072534.t1 MTR_3g105880 27.799 259 136 10 91 321 52 287 1.95e-13 70.9
MS.gene072534.t1 MTR_2g078760 29.956 227 109 10 86 311 112 289 2.18e-13 70.5
MS.gene072534.t1 MTR_3g032590 29.870 231 109 9 181 369 141 360 2.61e-13 71.2
MS.gene072534.t1 MTR_1g110210 28.159 277 146 15 94 364 71 300 5.65e-13 69.7
MS.gene072534.t1 MTR_2g033000 28.261 184 104 5 183 357 170 334 8.87e-13 69.3
MS.gene072534.t1 MTR_1g083750 30.556 216 122 11 165 372 24 219 1.27e-12 68.6
MS.gene072534.t1 MTR_7g090530 26.449 276 145 12 88 339 66 307 1.51e-12 68.9
MS.gene072534.t1 MTR_1g083750 30.556 216 122 11 165 372 116 311 1.71e-12 68.6
MS.gene072534.t1 MTR_7g029240 36.496 137 75 5 182 315 135 262 2.33e-12 68.2
MS.gene072534.t1 MTR_4g119830 30.337 178 91 4 170 323 264 432 3.35e-12 68.2
MS.gene072534.t1 MTR_4g007440 31.973 147 73 4 183 321 160 287 5.54e-12 67.0
MS.gene072534.t1 MTR_7g112430 35.849 159 84 7 182 335 131 276 7.78e-12 66.6
MS.gene072534.t1 MTR_1g019760 30.198 202 115 10 182 374 128 312 3.28e-11 64.7
MS.gene072534.t1 MTR_1g019760 30.198 202 115 10 182 374 128 312 5.16e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072534.t1 AT3G05640 72.527 364 84 3 1 362 1 350 0.0 546
MS.gene072534.t1 AT3G05640 72.527 364 84 3 1 362 1 350 0.0 546
MS.gene072534.t1 AT3G05640 72.527 364 84 3 1 362 1 350 0.0 546
MS.gene072534.t1 AT5G27930 70.637 361 97 5 1 360 1 353 0.0 543
MS.gene072534.t1 AT5G27930 70.637 361 97 5 1 360 1 353 0.0 543
MS.gene072534.t1 AT5G27930 71.197 309 80 5 1 308 1 301 1.42e-165 466
MS.gene072534.t1 AT3G16800 54.521 365 149 2 1 363 1 350 1.13e-138 399
MS.gene072534.t1 AT3G16800 54.521 365 149 2 1 363 1 350 1.13e-138 399
MS.gene072534.t1 AT3G16800 54.521 365 149 2 1 363 1 350 1.13e-138 399
MS.gene072534.t1 AT3G16800 58.148 270 98 1 94 363 1 255 3.06e-107 315
MS.gene072534.t1 AT3G16800 58.148 270 98 1 94 363 1 255 3.06e-107 315
MS.gene072534.t1 AT1G79630 45.217 345 156 3 50 362 57 400 6.03e-107 323
MS.gene072534.t1 AT1G79630 45.217 345 156 3 50 362 53 396 9.11e-107 323
MS.gene072534.t1 AT3G02750 43.236 377 181 4 14 361 21 393 6.61e-105 318
MS.gene072534.t1 AT3G02750 43.236 377 181 4 14 361 21 393 6.61e-105 318
MS.gene072534.t1 AT1G16220 46.037 328 158 3 50 362 54 377 1.14e-104 317
MS.gene072534.t1 AT5G36250 46.505 329 158 3 50 361 57 384 1.27e-102 310
MS.gene072534.t1 AT5G36250 44.898 343 157 4 50 361 57 398 8.59e-99 301
MS.gene072534.t1 AT3G02750 39.563 412 181 5 14 361 21 428 4.20e-97 299
MS.gene072534.t1 AT1G79630 45.860 314 137 3 81 362 18 330 5.29e-97 296
MS.gene072534.t1 AT1G79630 45.860 314 137 3 81 362 18 330 5.29e-97 296
MS.gene072534.t1 AT4G03415 46.667 315 158 4 63 370 70 381 6.41e-97 296
MS.gene072534.t1 AT4G03415 46.667 315 158 4 63 370 70 381 6.41e-97 296
MS.gene072534.t1 AT4G03415 46.667 315 158 4 63 370 70 381 6.41e-97 296
MS.gene072534.t1 AT1G03590 45.806 310 163 4 55 361 55 362 9.82e-96 293
MS.gene072534.t1 AT5G01700 43.574 319 168 4 51 368 38 345 7.22e-90 276
MS.gene072534.t1 AT5G01700 44.737 304 156 4 66 368 4 296 3.58e-89 272
MS.gene072534.t1 AT5G36250 46.918 292 136 4 50 323 57 347 3.43e-86 265
MS.gene072534.t1 AT1G79630 44.674 291 128 3 104 362 1 290 5.09e-83 258
MS.gene072534.t1 AT1G79630 44.674 291 128 3 104 362 1 290 5.09e-83 258
MS.gene072534.t1 AT1G79630 44.674 291 128 3 104 362 1 290 5.09e-83 258
MS.gene072534.t1 AT1G79630 44.674 291 128 3 104 362 1 290 5.09e-83 258
MS.gene072534.t1 AT4G32950 41.801 311 152 5 59 368 41 323 3.78e-76 238
MS.gene072534.t1 AT5G26010 43.042 309 154 6 60 367 43 330 8.58e-73 230
MS.gene072534.t1 AT3G16800 49.145 234 102 2 1 232 1 219 4.23e-70 220
MS.gene072534.t1 AT4G32950 42.629 251 115 5 59 308 41 263 2.22e-58 191
MS.gene072534.t1 AT2G20050 29.358 327 166 8 62 361 109 397 3.01e-33 132
MS.gene072534.t1 AT2G20050 29.358 327 166 8 62 361 109 397 3.59e-33 131
MS.gene072534.t1 AT3G06270 29.373 303 155 8 50 326 40 309 4.28e-29 115
MS.gene072534.t1 AT2G20630 34.432 273 122 13 88 359 60 276 3.91e-26 106
MS.gene072534.t1 AT2G20630 34.559 272 121 13 88 358 60 275 9.60e-26 105
MS.gene072534.t1 AT5G10740 30.882 272 134 8 91 362 64 281 4.48e-25 105
MS.gene072534.t1 AT5G10740 30.882 272 134 8 91 362 64 281 4.48e-25 105
MS.gene072534.t1 AT5G24940 30.996 271 133 8 91 361 64 280 5.75e-25 105
MS.gene072534.t1 AT4G28400 31.429 280 129 13 87 362 41 261 6.18e-24 100
MS.gene072534.t1 AT4G31750 30.588 255 120 10 93 344 66 266 9.46e-24 100
MS.gene072534.t1 AT4G31750 30.588 255 120 10 93 344 66 266 9.46e-24 100
MS.gene072534.t1 AT4G28400 32.234 273 122 13 94 362 70 283 9.85e-24 99.8
MS.gene072534.t1 AT4G31750 30.196 255 121 9 93 344 66 266 1.17e-23 100
MS.gene072534.t1 AT5G59220 33.755 237 109 9 91 321 148 342 8.46e-22 96.7
MS.gene072534.t1 AT1G78200 34.314 204 111 8 157 359 54 235 3.77e-20 89.0
MS.gene072534.t1 AT1G78200 34.314 204 111 8 157 359 54 235 3.77e-20 89.0
MS.gene072534.t1 AT2G25620 29.861 288 148 12 91 372 128 367 3.96e-20 91.3
MS.gene072534.t1 AT2G25620 29.861 288 148 12 91 372 128 367 3.96e-20 91.3
MS.gene072534.t1 AT1G43900 28.938 273 143 9 65 336 128 350 5.70e-20 90.9
MS.gene072534.t1 AT1G34750 36.111 180 90 8 183 361 126 281 6.22e-20 89.4
MS.gene072534.t1 AT1G34750 36.111 180 90 8 183 361 126 281 6.22e-20 89.4
MS.gene072534.t1 AT1G34750 36.111 180 90 8 183 361 126 281 6.22e-20 89.4
MS.gene072534.t1 AT1G78200 34.314 204 111 8 157 359 99 280 6.64e-20 89.4
MS.gene072534.t1 AT1G78200 34.314 204 111 8 157 359 99 280 6.64e-20 89.4
MS.gene072534.t1 AT1G78200 34.314 204 111 8 157 359 99 280 6.64e-20 89.4
MS.gene072534.t1 AT5G53140 27.324 355 200 13 9 362 52 349 1.07e-19 90.5
MS.gene072534.t1 AT5G53140 27.324 355 200 13 9 362 52 349 1.07e-19 90.5
MS.gene072534.t1 AT1G07430 30.328 244 111 9 91 321 157 354 1.97e-19 89.7
MS.gene072534.t1 AT3G15260 37.640 178 86 8 183 359 133 286 7.20e-19 86.3
MS.gene072534.t1 AT3G15260 37.640 178 86 8 183 359 133 286 7.20e-19 86.3
MS.gene072534.t1 AT3G11410 30.488 246 122 9 87 320 133 341 1.47e-18 87.0
MS.gene072534.t1 AT3G62260 30.037 273 141 13 91 357 27 255 1.63e-18 85.5
MS.gene072534.t1 AT3G62260 29.818 275 143 13 91 359 117 347 3.92e-18 85.5
MS.gene072534.t1 AT3G62260 29.818 275 143 13 91 359 116 346 4.28e-18 85.5
MS.gene072534.t1 AT2G40180 27.707 314 165 14 58 362 126 386 4.90e-18 85.1
MS.gene072534.t1 AT4G26080 31.687 243 126 9 78 320 159 361 2.42e-17 83.6
MS.gene072534.t1 AT5G57050 30.870 230 121 9 91 320 120 311 2.80e-17 82.8
MS.gene072534.t1 AT5G57050 30.870 230 121 9 91 320 160 351 3.48e-17 83.2
MS.gene072534.t1 AT2G34740 34.078 179 94 9 182 359 177 332 3.60e-17 82.0
MS.gene072534.t1 AT1G67820 28.873 284 152 11 49 332 75 308 1.77e-16 80.9
MS.gene072534.t1 AT3G51370 30.435 207 96 8 193 361 72 268 1.90e-16 79.3
MS.gene072534.t1 AT1G67820 29.304 273 143 11 49 321 111 333 2.58e-16 80.5
MS.gene072534.t1 AT3G55050 31.731 208 88 10 196 362 165 359 3.16e-16 79.7
MS.gene072534.t1 AT3G55050 31.731 208 88 10 196 362 165 359 3.16e-16 79.7
MS.gene072534.t1 AT1G22280 34.270 178 92 8 183 359 131 284 3.53e-16 78.6
MS.gene072534.t1 AT1G22280 34.270 178 92 8 183 359 125 278 3.70e-16 78.6
MS.gene072534.t1 AT3G51470 25.507 345 173 13 50 372 12 294 4.87e-16 78.6
MS.gene072534.t1 AT5G51760 38.000 150 76 4 171 320 189 321 5.14e-16 79.3
MS.gene072534.t1 AT1G48040 29.617 287 150 12 91 369 116 358 5.70e-16 79.0
MS.gene072534.t1 AT3G51370 26.537 309 155 13 91 361 79 353 5.72e-16 79.0
MS.gene072534.t1 AT3G51370 26.537 309 155 13 91 361 79 353 5.72e-16 79.0
MS.gene072534.t1 AT3G51470 25.507 345 173 13 50 372 56 338 6.15e-16 79.0
MS.gene072534.t1 AT5G51760 38.000 150 76 4 171 320 219 351 6.73e-16 79.0
MS.gene072534.t1 AT2G30020 27.508 309 158 13 62 361 141 392 1.55e-15 77.8
MS.gene072534.t1 AT3G17250 25.000 292 162 10 89 369 156 401 1.61e-15 78.2
MS.gene072534.t1 AT1G47380 32.653 196 109 9 182 372 127 304 2.71e-15 77.4
MS.gene072534.t1 AT1G07160 28.155 309 157 14 62 361 124 376 2.86e-15 77.0
MS.gene072534.t1 AT1G72770 30.279 251 112 9 91 320 238 446 4.15e-15 77.0
MS.gene072534.t1 AT1G72770 30.279 251 112 9 91 320 238 446 4.15e-15 77.0
MS.gene072534.t1 AT1G72770 30.279 251 112 9 91 320 238 446 4.15e-15 77.0
MS.gene072534.t1 AT2G40860 28.899 218 127 8 158 369 363 558 5.75e-15 76.6
MS.gene072534.t1 AT2G33700 27.869 305 141 12 39 320 58 306 7.83e-15 75.5
MS.gene072534.t1 AT2G40860 28.899 218 127 8 158 369 461 656 8.43e-15 76.3
MS.gene072534.t1 AT1G18030 27.413 259 137 9 94 339 112 332 6.31e-14 72.8
MS.gene072534.t1 AT1G17550 27.572 243 128 6 91 319 237 445 8.22e-14 73.2
MS.gene072534.t1 AT1G17550 27.572 243 128 6 91 319 237 445 8.22e-14 73.2
MS.gene072534.t1 AT5G66080 29.902 204 95 9 196 361 59 252 1.14e-13 71.2
MS.gene072534.t1 AT5G66080 29.902 204 95 9 196 361 163 356 2.05e-13 71.2
MS.gene072534.t1 AT2G34740 33.113 151 83 8 182 330 191 325 2.58e-13 70.5
MS.gene072534.t1 AT2G34740 33.113 151 83 8 182 330 173 307 2.73e-13 70.5
MS.gene072534.t1 AT3G12620 31.373 204 92 9 196 361 164 357 5.12e-13 70.1
MS.gene072534.t1 AT3G12620 31.373 204 92 9 196 361 164 357 5.12e-13 70.1
MS.gene072534.t1 AT4G28400 29.730 222 100 11 94 311 70 239 5.71e-13 68.6
MS.gene072534.t1 AT4G31860 27.132 258 139 9 91 321 52 287 6.13e-13 69.7
MS.gene072534.t1 AT1G18030 27.753 227 117 8 94 311 112 300 6.32e-13 69.3
MS.gene072534.t1 AT4G31860 27.132 258 139 9 91 321 52 287 7.16e-13 68.9
MS.gene072534.t1 AT2G40860 28.962 183 109 6 158 334 461 628 8.26e-13 70.1
MS.gene072534.t1 AT5G02760 28.230 209 94 8 196 363 153 346 9.73e-13 69.3
MS.gene072534.t1 AT2G25070 26.848 257 141 9 91 321 52 287 1.07e-12 68.9
MS.gene072534.t1 AT2G25070 26.848 257 141 9 91 321 52 287 1.07e-12 68.9
MS.gene072534.t1 AT4G38520 30.244 205 93 10 196 361 162 355 1.14e-12 69.3
MS.gene072534.t1 AT4G38520 30.244 205 93 10 196 361 162 355 1.14e-12 69.3
MS.gene072534.t1 AT5G06750 28.141 199 110 7 195 361 162 359 2.73e-11 65.1
MS.gene072534.t1 AT5G06750 28.141 199 110 7 195 361 162 359 2.73e-11 65.1
MS.gene072534.t1 AT5G06750 29.808 208 95 10 195 361 80 277 3.95e-11 63.9

Find 77 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGATTAAATTATAGGAATT+TGG 0.150752 7.2:+4397037 MS.gene072534:intron
GATTATTGTATTAAAGATTA+TGG 0.199525 7.2:+4398158 MS.gene072534:CDS
GGTTCCTTTCTGACCTCTTT+TGG 0.202885 7.2:-4396689 None:intergenic
CTTGCCATGTCAAGGGCTTT+TGG 0.208056 7.2:+4398134 MS.gene072534:CDS
CATTGACTCTCTTACTCTTT+TGG 0.217341 7.2:-4397125 None:intergenic
AAGTACTAACGAGGTAAATT+TGG 0.252923 7.2:-4397936 None:intergenic
AACAACAAAGATTCAATATA+TGG 0.311956 7.2:+4397254 MS.gene072534:CDS
ATCCTCTATGTTCAATGGTT+TGG 0.312680 7.2:+4396507 MS.gene072534:CDS
GTCTATTTAACAGTTTCAAT+TGG 0.327269 7.2:-4398937 None:intergenic
AATGTCTACTGCTTCTTGAT+TGG 0.329653 7.2:-4398761 None:intergenic
TCTGGCACTATTAATGTTGA+TGG 0.338334 7.2:+4396640 MS.gene072534:CDS
GCTATCTTGCTCAGGGGAAA+TGG 0.343840 7.2:-4398914 None:intergenic
CATTTATCCTCTATGTTCAA+TGG 0.363846 7.2:+4396502 MS.gene072534:CDS
ATATTCTGCGGTATATTTGA+TGG 0.364778 7.2:+4397076 MS.gene072534:CDS
ATATTCCTCTGAGTTACTTC+AGG 0.378333 7.2:-4398194 None:intergenic
ATCAGACGATGATGGAAGTT+TGG 0.389577 7.2:+4397884 MS.gene072534:CDS
CAAGGTCTTTGCTATGCAAT+TGG 0.407044 7.2:+4397149 MS.gene072534:CDS
TTTGTTGTGCTTGCCACTGA+TGG 0.408199 7.2:+4398233 MS.gene072534:CDS
CACCATGCAACAGTCTTGAT+TGG 0.411872 7.2:-4396710 None:intergenic
TCAATTGGGCTATCTTGCTC+AGG 0.413365 7.2:-4398922 None:intergenic
TATTTGATGGACACGGGCCA+TGG 0.420048 7.2:+4397089 MS.gene072534:CDS
CTATCTTGCTCAGGGGAAAT+GGG 0.431506 7.2:-4398913 None:intergenic
TCTATTTAACAGTTTCAATT+GGG 0.444557 7.2:-4398936 None:intergenic
GCCCTTGACATGGCAAGTCC+TGG 0.445151 7.2:-4398128 None:intergenic
AGCAAAATCAGCTAAACGTT+TGG 0.451570 7.2:+4398804 MS.gene072534:CDS
ATGCTCAAGTTCTTGATCAA+TGG 0.462238 7.2:-4397305 None:intergenic
TGGTGACTCTCGTGCAGTAC+TGG 0.463725 7.2:+4397854 MS.gene072534:CDS
TTGTTGTGCTTGCCACTGAT+GGG 0.475803 7.2:+4398234 MS.gene072534:CDS
TGCCCTCTCAATTGTTAGAC+AGG 0.479242 7.2:+4397363 MS.gene072534:CDS
CAGTGGCAAGCACAACAAAC+TGG 0.480296 7.2:-4398229 None:intergenic
AACCAGGAGTGCATAGGGTC+TGG 0.482895 7.2:+4398087 MS.gene072534:CDS
AACCAGACCCTATGCACTCC+TGG 0.483257 7.2:-4398089 None:intergenic
CGCAGAATATCATGTCCTCT+TGG 0.484795 7.2:-4397063 None:intergenic
ATTTGATGGACACGGGCCAT+GGG 0.489246 7.2:+4397090 MS.gene072534:CDS
AATAGCAGAAATATCATCAA+TGG 0.495485 7.2:-4398872 None:intergenic
CTCCAGGACTTGCCATGTCA+AGG 0.496930 7.2:+4398126 MS.gene072534:CDS
TTCTCCAAAAGAGGTCAGAA+AGG 0.500364 7.2:+4396685 MS.gene072534:CDS
AGTCCTGGAGACTCTACATC+TGG 0.508363 7.2:-4398113 None:intergenic
TGATGAACCAGGAGTGCATA+GGG 0.509549 7.2:+4398082 MS.gene072534:CDS
TTACCAGATGTAGAGTCTCC+AGG 0.526827 7.2:+4398110 MS.gene072534:CDS
TGCATGGAAACGCAAGAGAA+GGG 0.527483 7.2:+4398843 MS.gene072534:CDS
GAGAGAATAATTCAGTGTCA+AGG 0.530299 7.2:+4398041 MS.gene072534:CDS
ATCAAGACTGTTGCATGGTG+TGG 0.533904 7.2:+4396713 MS.gene072534:CDS
CAATTGGGCTATCTTGCTCA+GGG 0.538157 7.2:-4398921 None:intergenic
ATCACTTGACGATCATGTAA+AGG 0.552534 7.2:+4397198 MS.gene072534:CDS
GAGAGAAGCTGTTGAAGCAA+TGG 0.555010 7.2:+4396579 MS.gene072534:CDS
TGCGGTATATTTGATGGACA+CGG 0.560385 7.2:+4397082 MS.gene072534:CDS
TCCAGGACTTGCCATGTCAA+GGG 0.561968 7.2:+4398127 MS.gene072534:CDS
GCTACAACATCAGACGATGA+TGG 0.562423 7.2:+4397876 MS.gene072534:CDS
ATGCATGGAAACGCAAGAGA+AGG 0.563663 7.2:+4398842 MS.gene072534:CDS
TACCTGTCTAACAATTGAGA+GGG 0.565339 7.2:-4397365 None:intergenic
AAAATCAGCTAAACGTTTGG+TGG 0.569397 7.2:+4398807 MS.gene072534:CDS
TGCCAAACCATTGAACATAG+AGG 0.573400 7.2:-4396509 None:intergenic
CAATTGCATAGCAAAGACCT+TGG 0.578108 7.2:-4397148 None:intergenic
GAAATTCTGTGAGATGTGAA+AGG 0.584077 7.2:+4396557 MS.gene072534:CDS
GCGGTATATTTGATGGACAC+GGG 0.590895 7.2:+4397083 MS.gene072534:CDS
CTTGCTCAGGGGAAATGGGA+GGG 0.592417 7.2:-4398909 None:intergenic
AGAGAATAATTCAGTGTCAA+GGG 0.594886 7.2:+4398042 MS.gene072534:CDS
TCTTGCTCAGGGGAAATGGG+AGG 0.601493 7.2:-4398910 None:intergenic
TGTTGTGCTTGCCACTGATG+GGG 0.603053 7.2:+4398235 MS.gene072534:CDS
TTACCTGTCTAACAATTGAG+AGG 0.603400 7.2:-4397366 None:intergenic
TTGGCTACAAAGTGACCCCA+TGG 0.606377 7.2:-4397106 None:intergenic
GAGTAAGAGAGTCAATGCCA+AGG 0.613440 7.2:+4397131 MS.gene072534:CDS
ATGATGAACCAGGAGTGCAT+AGG 0.615902 7.2:+4398081 MS.gene072534:CDS
ATCTCCAAAAGCCCTTGACA+TGG 0.615912 7.2:-4398138 None:intergenic
TCAAGACTGTTGCATGGTGT+GGG 0.621717 7.2:+4396714 MS.gene072534:CDS
TGGAATGTGCAGTACATGCA+TGG 0.626814 7.2:+4398827 MS.gene072534:CDS
AACCAATCAAGACTGTTGCA+TGG 0.651730 7.2:+4396708 MS.gene072534:CDS
GCATGGAAACGCAAGAGAAG+GGG 0.652422 7.2:+4398844 MS.gene072534:CDS
TTCTGTTTAAATGATGAACC+AGG 0.665974 7.2:+4398071 MS.gene072534:CDS
CAAGATACTTACCCCATCAG+TGG 0.666268 7.2:-4398246 None:intergenic
CAAGAGGACATGATATTCTG+CGG 0.676913 7.2:+4397064 MS.gene072534:CDS
ATAGGAATTTGGATGCCAAG+AGG 0.678718 7.2:+4397048 MS.gene072534:intron
TTTGATGGACACGGGCCATG+GGG 0.686895 7.2:+4397091 MS.gene072534:CDS
AGACTGTTGCATGGTGTGGG+AGG 0.695512 7.2:+4396717 MS.gene072534:CDS
AATTGGGCTATCTTGCTCAG+GGG 0.712499 7.2:-4398920 None:intergenic
CAGTACCTGAAGTAACTCAG+AGG 0.714319 7.2:+4398189 MS.gene072534:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGAGATTAAATATGT+TGG + chr7.2:4398429-4398448 MS.gene072534:intron 15.0%
!! ACAAATAAATAAATAATCAC+CGG + chr7.2:4398589-4398608 MS.gene072534:intron 15.0%
!! ATATCAAAGACAAATAAAAT+GGG - chr7.2:4396965-4396984 None:intergenic 15.0%
!! GATTATTGTATTAAAGATTA+TGG + chr7.2:4398158-4398177 MS.gene072534:CDS 15.0%
!! TATATCAAAGACAAATAAAA+TGG - chr7.2:4396966-4396985 None:intergenic 15.0%
!! TTTGATATAAAATTCAATTC+TGG + chr7.2:4396977-4396996 MS.gene072534:intron 15.0%
!!! AGTTAATTATGTTTTTAGTT+TGG - chr7.2:4398663-4398682 None:intergenic 15.0%
!!! TTATCTATTTATTTGTTATC+TGG - chr7.2:4398529-4398548 None:intergenic 15.0%
!! AACAACAAAGATTCAATATA+TGG + chr7.2:4397254-4397273 MS.gene072534:CDS 20.0%
!! ACGATTAAATTATAGGAATT+TGG + chr7.2:4397037-4397056 MS.gene072534:intron 20.0%
!! TAATTTAATCGTCAATAGAT+AGG - chr7.2:4397029-4397048 None:intergenic 20.0%
!! TCTATTGACGATTAAATTAT+AGG + chr7.2:4397030-4397049 MS.gene072534:intron 20.0%
!! TTAAATTTATTGCTGAAATG+TGG + chr7.2:4398684-4398703 MS.gene072534:intron 20.0%
!!! AATCATAGTAACTAGTTTAT+AGG - chr7.2:4398273-4398292 None:intergenic 20.0%
!!! TGGGTTGATTATAAATATAT+AGG - chr7.2:4396946-4396965 None:intergenic 20.0%
!!! TTATTTTATAATGGTTTGCA+GGG + chr7.2:4397807-4397826 MS.gene072534:intron 20.0%
!!! TTTATTTTATAATGGTTTGC+AGG + chr7.2:4397806-4397825 MS.gene072534:intron 20.0%
! AATAGCAGAAATATCATCAA+TGG - chr7.2:4398875-4398894 None:intergenic 25.0%
! ATTTGTTCATGTTACAAGTT+TGG - chr7.2:4397653-4397672 None:intergenic 25.0%
! GATATAAAATTCAATTCTGG+TGG + chr7.2:4396980-4396999 MS.gene072534:intron 25.0%
! TCTGCTAACTAGTATATATA+CGG - chr7.2:4397448-4397467 None:intergenic 25.0%
! TGAGACATTTAGATTATGAT+TGG + chr7.2:4398487-4398506 MS.gene072534:intron 25.0%
!! AGATCATTTTCACTAAAGAA+AGG + chr7.2:4396532-4396551 MS.gene072534:CDS 25.0%
!! GAGTTTATTGTTGTCAATTT+TGG - chr7.2:4398393-4398412 None:intergenic 25.0%
!! TTTTAATGAATTTCTCCCTA+CGG - chr7.2:4397417-4397436 None:intergenic 25.0%
!!! AATAAATAGAAGTACTAACG+AGG - chr7.2:4397948-4397967 None:intergenic 25.0%
!!! TATTTTATAATGGTTTGCAG+GGG + chr7.2:4397808-4397827 MS.gene072534:intron 25.0%
AACAATATAGTTGCGATGTT+AGG + chr7.2:4397477-4397496 MS.gene072534:intron 30.0%
AACTTCACTGATATATTGGT+TGG - chr7.2:4397759-4397778 None:intergenic 30.0%
AAGTACTAACGAGGTAAATT+TGG - chr7.2:4397939-4397958 None:intergenic 30.0%
ACAATATAGTTGCGATGTTA+GGG + chr7.2:4397478-4397497 MS.gene072534:intron 30.0%
AGAGAATAATTCAGTGTCAA+GGG + chr7.2:4398042-4398061 MS.gene072534:CDS 30.0%
ATATTCTGCGGTATATTTGA+TGG + chr7.2:4397076-4397095 MS.gene072534:CDS 30.0%
CAAGAACTTCACTGATATAT+TGG - chr7.2:4397763-4397782 None:intergenic 30.0%
CATTTATCCTCTATGTTCAA+TGG + chr7.2:4396502-4396521 MS.gene072534:CDS 30.0%
GTAATCCAATTCCATCAAAT+AGG - chr7.2:4397550-4397569 None:intergenic 30.0%
GTTACAAGTTTGGTAAATGT+AGG - chr7.2:4397643-4397662 None:intergenic 30.0%
TAATTGCATAATTGCAGAAG+AGG + chr7.2:4398016-4398035 MS.gene072534:intron 30.0%
TACATGTTTGTATACACGTT+GGG - chr7.2:4396906-4396925 None:intergenic 30.0%
TTCTGTTTAAATGATGAACC+AGG + chr7.2:4398071-4398090 MS.gene072534:CDS 30.0%
TTGAAGGTTAAACAAACTCA+CGG - chr7.2:4396842-4396861 None:intergenic 30.0%
! ACATGAACAAATTGATGACA+TGG + chr7.2:4397661-4397680 MS.gene072534:intron 30.0%
! ACATGTACTCGTTACATTTT+TGG + chr7.2:4396919-4396938 MS.gene072534:intron 30.0%
!! ATGTCTTTGAAATAAGTGCT+GGG + chr7.2:4397507-4397526 MS.gene072534:intron 30.0%
!! ATTTTATAATGGTTTGCAGG+GGG + chr7.2:4397809-4397828 MS.gene072534:intron 30.0%
!! TATGTCTTTGAAATAAGTGC+TGG + chr7.2:4397506-4397525 MS.gene072534:intron 30.0%
AAAATCAGCTAAACGTTTGG+TGG + chr7.2:4398807-4398826 MS.gene072534:CDS 35.0%
AACAATAAACTCTCACACAC+AGG + chr7.2:4398401-4398420 MS.gene072534:intron 35.0%
AATGTCTACTGCTTCTTGAT+TGG - chr7.2:4398764-4398783 None:intergenic 35.0%
AGCAAAATCAGCTAAACGTT+TGG + chr7.2:4398804-4398823 MS.gene072534:CDS 35.0%
ATATTCCTCTGAGTTACTTC+AGG - chr7.2:4398197-4398216 None:intergenic 35.0%
ATCACTTGACGATCATGTAA+AGG + chr7.2:4397198-4397217 MS.gene072534:CDS 35.0%
ATCCTCTATGTTCAATGGTT+TGG + chr7.2:4396507-4396526 MS.gene072534:CDS 35.0%
ATCTTGATCAAATACCGATC+TGG - chr7.2:4397690-4397709 None:intergenic 35.0%
ATGCTCAAGTTCTTGATCAA+TGG - chr7.2:4397308-4397327 None:intergenic 35.0%
ATTACAATTTGGCAGTTGAC+TGG + chr7.2:4398616-4398635 MS.gene072534:intron 35.0%
CTCTTGTAGAAATGAAACTC+TGG + chr7.2:4398363-4398382 MS.gene072534:intron 35.0%
CTGCCAAATTGTAATATGAC+CGG - chr7.2:4398611-4398630 None:intergenic 35.0%
GAAATTCTGTGAGATGTGAA+AGG + chr7.2:4396557-4396576 MS.gene072534:CDS 35.0%
GAGAGAATAATTCAGTGTCA+AGG + chr7.2:4398041-4398060 MS.gene072534:CDS 35.0%
GGAGTTACATTAAGTACTTG+TGG + chr7.2:4398705-4398724 MS.gene072534:intron 35.0%
GTACATGTTTGTATACACGT+TGG - chr7.2:4396907-4396926 None:intergenic 35.0%
GTTAATCATCTGCATCATTC+TGG + chr7.2:4397002-4397021 MS.gene072534:intron 35.0%
TACCTGTCTAACAATTGAGA+GGG - chr7.2:4397368-4397387 None:intergenic 35.0%
TCACCGGTCATATTACAATT+TGG + chr7.2:4398605-4398624 MS.gene072534:intron 35.0%
TCTGGCACTATTAATGTTGA+TGG + chr7.2:4396640-4396659 MS.gene072534:CDS 35.0%
TCTGTCCTATTTGATGGAAT+TGG + chr7.2:4397542-4397561 MS.gene072534:intron 35.0%
TGACAAAAGCTACACTTTGA+AGG - chr7.2:4396858-4396877 None:intergenic 35.0%
TTACCTGTCTAACAATTGAG+AGG - chr7.2:4397369-4397388 None:intergenic 35.0%
! ACGGTTTTCATAGCAAATGT+TGG + chr7.2:4397834-4397853 MS.gene072534:CDS 35.0%
! TAAGAGCTTGTTTCGAATTC+CGG + chr7.2:4396791-4396810 MS.gene072534:intron 35.0%
!! AAGTTTGACTCGTTTTACAG+TGG + chr7.2:4397334-4397353 MS.gene072534:CDS 35.0%
!! AATAAGTGCTGGGATAACAA+TGG + chr7.2:4397517-4397536 MS.gene072534:intron 35.0%
!! TTAGCTGATTTTGCTTTGTC+TGG - chr7.2:4398799-4398818 None:intergenic 35.0%
!! TTGTTTTGTGATGCAGGTTT+GGG + chr7.2:4398729-4398748 MS.gene072534:intron 35.0%
!! TTTAGTTTGGTTCAACCAGT+TGG - chr7.2:4398650-4398669 None:intergenic 35.0%
!!! CATTGACTCTCTTACTCTTT+TGG - chr7.2:4397128-4397147 None:intergenic 35.0%
!!! TTTGTTTTGTGATGCAGGTT+TGG + chr7.2:4398728-4398747 MS.gene072534:intron 35.0%
AACAACTTTCGAGAATCCGT+AGG + chr7.2:4397398-4397417 MS.gene072534:intron 40.0%
AACCAATCAAGACTGTTGCA+TGG + chr7.2:4396708-4396727 MS.gene072534:CDS 40.0%
ACAACTTTCGAGAATCCGTA+GGG + chr7.2:4397399-4397418 MS.gene072534:intron 40.0%
ATAGGAATTTGGATGCCAAG+AGG + chr7.2:4397048-4397067 MS.gene072534:intron 40.0%
ATGGCATCTGTCCTATTTGA+TGG + chr7.2:4397536-4397555 MS.gene072534:intron 40.0%
CAAGAGGACATGATATTCTG+CGG + chr7.2:4397064-4397083 MS.gene072534:CDS 40.0%
CAATTGCATAGCAAAGACCT+TGG - chr7.2:4397151-4397170 None:intergenic 40.0%
CGTTGGGTTTGACAAAATCA+CGG - chr7.2:4396890-4396909 None:intergenic 40.0%
TGATGACATGGAATCCAGAT+CGG + chr7.2:4397673-4397692 MS.gene072534:intron 40.0%
TGCCAAACCATTGAACATAG+AGG - chr7.2:4396512-4396531 None:intergenic 40.0%
TTCTCCAAAAGAGGTCAGAA+AGG + chr7.2:4396685-4396704 MS.gene072534:CDS 40.0%
TTGGTTCAACCAGTTGGATT+AGG - chr7.2:4398644-4398663 None:intergenic 40.0%
! AAGAGCTTGTTTCGAATTCC+GGG + chr7.2:4396792-4396811 MS.gene072534:intron 40.0%
! CAAGGTCTTTGCTATGCAAT+TGG + chr7.2:4397149-4397168 MS.gene072534:CDS 40.0%
! CTTGATTTTGTCAAAACCCC+CGG - chr7.2:4396813-4396832 None:intergenic 40.0%
! GACTTGATTTTGTGTAGCTC+TGG + chr7.2:4396622-4396641 MS.gene072534:CDS 40.0%
! TGCGGTATATTTGATGGACA+CGG + chr7.2:4397082-4397101 MS.gene072534:CDS 40.0%
!! ACCTCTTTTGGAGAAAACTG+AGG - chr7.2:4396680-4396699 None:intergenic 40.0%
!! ATCAGACGATGATGGAAGTT+TGG + chr7.2:4397884-4397903 MS.gene072534:CDS 40.0%
!!! TGTGGTTTGTTTTGTGATGC+AGG + chr7.2:4398723-4398742 MS.gene072534:intron 40.0%
AATTGGGCTATCTTGCTCAG+GGG - chr7.2:4398923-4398942 None:intergenic 45.0%
ATCAAGACTGTTGCATGGTG+TGG + chr7.2:4396713-4396732 MS.gene072534:CDS 45.0%
ATCTCCAAAAGCCCTTGACA+TGG - chr7.2:4398141-4398160 None:intergenic 45.0%
ATGCATGGAAACGCAAGAGA+AGG + chr7.2:4398842-4398861 MS.gene072534:CDS 45.0%
CAAGATACTTACCCCATCAG+TGG - chr7.2:4398249-4398268 None:intergenic 45.0%
CAATTGGGCTATCTTGCTCA+GGG - chr7.2:4398924-4398943 None:intergenic 45.0%
CACCATGCAACAGTCTTGAT+TGG - chr7.2:4396713-4396732 None:intergenic 45.0%
CAGTACCTGAAGTAACTCAG+AGG + chr7.2:4398189-4398208 MS.gene072534:CDS 45.0%
CGCAGAATATCATGTCCTCT+TGG - chr7.2:4397066-4397085 None:intergenic 45.0%
CTATCTTGCTCAGGGGAAAT+GGG - chr7.2:4398916-4398935 None:intergenic 45.0%
GAGAGAAGCTGTTGAAGCAA+TGG + chr7.2:4396579-4396598 MS.gene072534:CDS 45.0%
GAGTAAGAGAGTCAATGCCA+AGG + chr7.2:4397131-4397150 MS.gene072534:CDS 45.0%
GCTACAACATCAGACGATGA+TGG + chr7.2:4397876-4397895 MS.gene072534:CDS 45.0%
TCAAGACTGTTGCATGGTGT+GGG + chr7.2:4396714-4396733 MS.gene072534:CDS 45.0%
TCAATTGGGCTATCTTGCTC+AGG - chr7.2:4398925-4398944 None:intergenic 45.0%
TGCATGGAAACGCAAGAGAA+GGG + chr7.2:4398843-4398862 MS.gene072534:CDS 45.0%
TGCCCTCTCAATTGTTAGAC+AGG + chr7.2:4397363-4397382 MS.gene072534:CDS 45.0%
TGGAATGTGCAGTACATGCA+TGG + chr7.2:4398827-4398846 MS.gene072534:CDS 45.0%
TTACCAGATGTAGAGTCTCC+AGG + chr7.2:4398110-4398129 MS.gene072534:CDS 45.0%
TTGTTGTGCTTGCCACTGAT+GGG + chr7.2:4398234-4398253 MS.gene072534:CDS 45.0%
! AGAGCTTGTTTCGAATTCCG+GGG + chr7.2:4396793-4396812 MS.gene072534:intron 45.0%
! ATGATGAACCAGGAGTGCAT+AGG + chr7.2:4398081-4398100 MS.gene072534:CDS 45.0%
! GCCTCAGTTTTCTCCAAAAG+AGG + chr7.2:4396676-4396695 MS.gene072534:CDS 45.0%
! GCGGTATATTTGATGGACAC+GGG + chr7.2:4397083-4397102 MS.gene072534:CDS 45.0%
! GGTTCCTTTCTGACCTCTTT+TGG - chr7.2:4396692-4396711 None:intergenic 45.0%
! TAATGGTTTGCAGGGGGAAA+CGG + chr7.2:4397815-4397834 MS.gene072534:intron 45.0%
! TGACTGGTTCCTAATCCAAC+TGG + chr7.2:4398632-4398651 MS.gene072534:intron 45.0%
! TGATGAACCAGGAGTGCATA+GGG + chr7.2:4398082-4398101 MS.gene072534:CDS 45.0%
! TTTGTTGTGCTTGCCACTGA+TGG + chr7.2:4398233-4398252 MS.gene072534:CDS 45.0%
!! CGGGGGTTTTGACAAAATCA+AGG + chr7.2:4396811-4396830 MS.gene072534:intron 45.0%
!! TCATTTATAATTATATAAAT+TGG + chr7.2:4397978-4397997 MS.gene072534:intron 5.0%
!!! TTAGTTAATTTATTTTATAA+TGG + chr7.2:4397798-4397817 MS.gene072534:intron 5.0%
AGTCCTGGAGACTCTACATC+TGG - chr7.2:4398116-4398135 None:intergenic 50.0%
CAGTGGCAAGCACAACAAAC+TGG - chr7.2:4398232-4398251 None:intergenic 50.0%
GCATGGAAACGCAAGAGAAG+GGG + chr7.2:4398844-4398863 MS.gene072534:CDS 50.0%
GCTATCTTGCTCAGGGGAAA+TGG - chr7.2:4398917-4398936 None:intergenic 50.0%
TCCAGGACTTGCCATGTCAA+GGG + chr7.2:4398127-4398146 MS.gene072534:CDS 50.0%
TGTTGTGCTTGCCACTGATG+GGG + chr7.2:4398235-4398254 MS.gene072534:CDS 50.0%
TTGGCTACAAAGTGACCCCA+TGG - chr7.2:4397109-4397128 None:intergenic 50.0%
! ATTTGATGGACACGGGCCAT+GGG + chr7.2:4397090-4397109 MS.gene072534:CDS 50.0%
! CTTGCCATGTCAAGGGCTTT+TGG + chr7.2:4398134-4398153 MS.gene072534:CDS 50.0%
! GAGCTTGTTTCGAATTCCGG+GGG + chr7.2:4396794-4396813 MS.gene072534:intron 50.0%
! TATTTGATGGACACGGGCCA+TGG + chr7.2:4397089-4397108 MS.gene072534:CDS 50.0%
AACCAGACCCTATGCACTCC+TGG - chr7.2:4398092-4398111 None:intergenic 55.0%
AGACTGTTGCATGGTGTGGG+AGG + chr7.2:4396717-4396736 MS.gene072534:CDS 55.0%
CTCCAGGACTTGCCATGTCA+AGG + chr7.2:4398126-4398145 MS.gene072534:CDS 55.0%
CTTGCTCAGGGGAAATGGGA+GGG - chr7.2:4398912-4398931 None:intergenic 55.0%
TCTTGCTCAGGGGAAATGGG+AGG - chr7.2:4398913-4398932 None:intergenic 55.0%
TGGTGACTCTCGTGCAGTAC+TGG + chr7.2:4397854-4397873 MS.gene072534:CDS 55.0%
! AACCAGGAGTGCATAGGGTC+TGG + chr7.2:4398087-4398106 MS.gene072534:CDS 55.0%
! TTTGATGGACACGGGCCATG+GGG + chr7.2:4397091-4397110 MS.gene072534:CDS 55.0%
GCCCTTGACATGGCAAGTCC+TGG - chr7.2:4398131-4398150 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 4396496 4398957 4396496 ID=MS.gene072534
chr7.2 mRNA 4396496 4398957 4396496 ID=MS.gene072534.t1;Parent=MS.gene072534
chr7.2 exon 4396496 4396738 4396496 ID=MS.gene072534.t1.exon1;Parent=MS.gene072534.t1
chr7.2 CDS 4396496 4396738 4396496 ID=cds.MS.gene072534.t1;Parent=MS.gene072534.t1
chr7.2 exon 4397052 4397384 4397052 ID=MS.gene072534.t1.exon2;Parent=MS.gene072534.t1
chr7.2 CDS 4397052 4397384 4397052 ID=cds.MS.gene072534.t1;Parent=MS.gene072534.t1
chr7.2 exon 4397828 4397948 4397828 ID=MS.gene072534.t1.exon3;Parent=MS.gene072534.t1
chr7.2 CDS 4397828 4397948 4397828 ID=cds.MS.gene072534.t1;Parent=MS.gene072534.t1
chr7.2 exon 4398033 4398256 4398033 ID=MS.gene072534.t1.exon4;Parent=MS.gene072534.t1
chr7.2 CDS 4398033 4398256 4398033 ID=cds.MS.gene072534.t1;Parent=MS.gene072534.t1
chr7.2 exon 4398745 4398957 4398745 ID=MS.gene072534.t1.exon5;Parent=MS.gene072534.t1
chr7.2 CDS 4398745 4398957 4398745 ID=cds.MS.gene072534.t1;Parent=MS.gene072534.t1
Gene Sequence

>MS.gene072534

ATGGGGCATTTATCCTCTATGTTCAATGGTTTGGCAAGATCATTTTCACTAAAGAAAGGAAGAAATTCTGTGAGATGTGAAAGGAGAGAAGCTGTTGAAGCAATGGCAAAAGAAGCTAAGAAAAATGACTTGATTTTGTGTAGCTCTGGCACTATTAATGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGTCAGAAAGGAACCAATCAAGACTGTTGCATGGTGTGGGAGGTATGCACAAAAATTAAATACTATAATCAAAAAACTTTTTTTGTTATTGTTTTAAGAGCTTGTTTCGAATTCCGGGGGTTTTGACAAAATCAAGGTGACACCGTGAGTTTGTTTAACCTTCAAAGTGTAGCTTTTGTCAAAATCAAAACCGTGATTTTGTCAAACCCAACGTGTATACAAACATGTACTCGTTACATTTTTGGTCCTATATATTTATAATCAACCCATTTTATTTGTCTTTGATATAAAATTCAATTCTGGTGGTTAATCATCTGCATCATTCTGGTCCTATCTATTGACGATTAAATTATAGGAATTTGGATGCCAAGAGGACATGATATTCTGCGGTATATTTGATGGACACGGGCCATGGGGTCACTTTGTAGCCAAAAGAGTAAGAGAGTCAATGCCAAGGTCTTTGCTATGCAATTGGCAAGAGACACTTGCTACACAATCTTCATCACTTGACGATCATGTAAAGGATATTGATCATGTTAAGATAGCTGCAGACAACAAACAACAAAGATTCAATATATGGAAGCACTCTTTCTTGAAGACTTGTGCTTCCATTGATCAAGAACTTGAGCATTGTCGAAAGTTTGACTCGTTTTACAGTGGAACAACTGCCCTCTCAATTGTTAGACAGGTAAATACATAGAAACAACTTTCGAGAATCCGTAGGGAGAAATTCATTAAAAACAAAGTGCCGTATATATACTAGTTAGCAGATATTTAAATAACAATATAGTTGCGATGTTAGGGTTTTTTATGTCTTTGAAATAAGTGCTGGGATAACAATGGCATCTGTCCTATTTGATGGAATTGGATTACATGCAGTCACACATTTATGTTTTTAACAATCTCAATCATTGATTTTGTTCATACGACACATATGATAAGACCTACATTTACCAAACTTGTAACATGAACAAATTGATGACATGGAATCCAGATCGGTATTTGATCAAGATTTTCTATAATATGAAAATTCGCGACATGACAATGATTATAAATAGACCAACCAATATATCAGTGAAGTTCTTGCTTTGAAACTTTATCTTAGTTAATTTATTTTATAATGGTTTGCAGGGGGAAACGGTTTTCATAGCAAATGTTGGTGACTCTCGTGCAGTACTGGCTACAACATCAGACGATGATGGAAGTTTGGTAGCAGTACAACTAACAGTTGATTTCAAGCCAAATTTACCTCGTTAGTACTTCTATTTATTCATTCTTATTTCATTTATAATTATATAAATTGGCTTCTCACTATATTATAATTGCATAATTGCAGAAGAGGAAGAGAGAATAATTCAGTGTCAAGGGCGTGTGTTCTGTTTAAATGATGAACCAGGAGTGCATAGGGTCTGGTTACCAGATGTAGAGTCTCCAGGACTTGCCATGTCAAGGGCTTTTGGAGATTATTGTATTAAAGATTATGGTCTTATTTCAGTACCTGAAGTAACTCAGAGGAATATAAGTAGTAAAGACCAGTTTGTTGTGCTTGCCACTGATGGGGTAAGTATCTTGTCCTATAAACTAGTTACTATGATTGAATTTGATTACAACATCTTACTAGTTAAATTTTTTAGTCACAAAACAAATCTTACTAGTTACATTTAATCTCTTGTAGAAATGAAACTCTGGTATTCCAAAATTGACAACAATAAACTCTCACACACAGGAAGTTAAAATTGAGATTAAATATGTTGGTTTAGTTAAAAACAATGTTGCAAAAACTAAATTAGTGAGACATTTAGATTATGATTGGATTAGTTATGATTGAACCAGATAACAAATAAATAGATAAATCATAGAAATATCATTAAAAAAAGTAAAAGAATAAACAAACAAATAAATAAATAATCACCGGTCATATTACAATTTGGCAGTTGACTGGTTCCTAATCCAACTGGTTGAACCAAACTAAAAACATAATTAACTCTTAAATTTATTGCTGAAATGTGGAGTTACATTAAGTACTTGTGGTTTGTTTTGTGATGCAGGTTTGGGATGTGATCTCCAATCAAGAAGCAGTAGACATTGTATCTTCAACACCAGACAAAGCAAAATCAGCTAAACGTTTGGTGGAATGTGCAGTACATGCATGGAAACGCAAGAGAAGGGGTATTGCCATTGATGATATTTCTGCTATTTGTCTCTTTTTGCACCCTCCCATTTCCCCTGAGCAAGATAGCCCAATTGAAACTGTTAAATAG
Protein sequence

>MS.gene072534.t1

MGHLSSMFNGLARSFSLKKGRNSVRCERREAVEAMAKEAKKNDLILCSSGTINVDGSNNFASVFSKRGQKGTNQDCCMVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPRSLLCNWQETLATQSSSLDDHVKDIDHVKIAADNKQQRFNIWKHSFLKTCASIDQELEHCRKFDSFYSGTTALSIVRQGETVFIANVGDSRAVLATTSDDDGSLVAVQLTVDFKPNLPQEEERIIQCQGRVFCLNDEPGVHRVWLPDVESPGLAMSRAFGDYCIKDYGLISVPEVTQRNISSKDQFVVLATDGVWDVISNQEAVDIVSSTPDKAKSAKRLVECAVHAWKRKRRGIAIDDISAICLFLHPPISPEQDSPIETVK