Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050936.t1 | XP_003626188.1 | 96.3 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 8.40E-214 | 752.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050936.t1 | Q9M9W9 | 72.5 | 364 | 84 | 3 | 1 | 362 | 1 | 350 | 1.3e-151 | 537.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050936.t1 | A0A072UFC9 | 96.3 | 377 | 14 | 0 | 1 | 377 | 19 | 395 | 6.1e-214 | 752.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050936 | MS.gene067274 | -0.80241 | 5.68E-49 | -1.69E-46 |
| MS.gene050936 | MS.gene072534 | 0.99928 | 2.39E-300 | -1.69E-46 |
| MS.gene050936 | MS.gene22798 | 0.980839 | 3.74E-151 | -1.69E-46 |
| MS.gene050936 | MS.gene38584 | 0.812063 | 5.12E-51 | -1.69E-46 |
| MS.gene050936 | MS.gene46989 | 0.803546 | 3.31E-49 | -1.69E-46 |
| MS.gene050936 | MS.gene78896 | 0.813176 | 2.92E-51 | -1.69E-46 |
| MS.gene050936 | MS.gene83432 | 0.809048 | 2.29E-50 | -1.69E-46 |
| MS.gene050936 | MS.gene83683 | 0.809628 | 1.72E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050936 | MS.gene96326 | PPI |
| MS.gene012318 | MS.gene050936 | PPI |
| MS.gene050936 | MS.gene073336 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050936.t1 | MTR_7g112490 | 96.286 | 377 | 14 | 0 | 1 | 377 | 19 | 395 | 0.0 | 763 |
| MS.gene050936.t1 | MTR_7g112490 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
| MS.gene050936.t1 | MTR_1g083690 | 76.519 | 362 | 74 | 4 | 1 | 362 | 1 | 351 | 0.0 | 555 |
| MS.gene050936.t1 | MTR_4g120410 | 59.669 | 362 | 137 | 2 | 1 | 362 | 1 | 353 | 1.08e-164 | 465 |
| MS.gene050936.t1 | MTR_2g435550 | 60.331 | 363 | 134 | 3 | 1 | 362 | 1 | 354 | 1.54e-164 | 465 |
| MS.gene050936.t1 | MTR_2g435550 | 63.772 | 334 | 112 | 2 | 29 | 362 | 16 | 340 | 5.84e-163 | 460 |
| MS.gene050936.t1 | MTR_2g435550 | 59.475 | 343 | 129 | 3 | 1 | 342 | 1 | 334 | 2.58e-152 | 435 |
| MS.gene050936.t1 | MTR_7g080170 | 50.898 | 334 | 134 | 4 | 52 | 361 | 57 | 384 | 8.06e-111 | 333 |
| MS.gene050936.t1 | MTR_7g021530 | 49.231 | 325 | 150 | 5 | 50 | 362 | 47 | 368 | 9.31e-106 | 317 |
| MS.gene050936.t1 | MTR_7g021530 | 49.231 | 325 | 150 | 5 | 50 | 362 | 88 | 409 | 3.79e-105 | 317 |
| MS.gene050936.t1 | MTR_8g017240 | 50.799 | 313 | 137 | 5 | 50 | 362 | 45 | 340 | 3.46e-103 | 309 |
| MS.gene050936.t1 | MTR_4g037470 | 45.370 | 324 | 170 | 3 | 52 | 370 | 58 | 379 | 2.44e-101 | 308 |
| MS.gene050936.t1 | MTR_2g090190 | 46.395 | 319 | 165 | 3 | 55 | 369 | 55 | 371 | 1.58e-98 | 301 |
| MS.gene050936.t1 | MTR_4g037470 | 44.144 | 333 | 170 | 4 | 52 | 370 | 58 | 388 | 3.26e-98 | 300 |
| MS.gene050936.t1 | MTR_7g070510 | 44.172 | 326 | 174 | 3 | 52 | 371 | 53 | 376 | 4.82e-97 | 296 |
| MS.gene050936.t1 | MTR_7g021530 | 49.320 | 294 | 134 | 5 | 81 | 362 | 28 | 318 | 3.01e-93 | 283 |
| MS.gene050936.t1 | MTR_4g013295 | 43.506 | 308 | 167 | 3 | 56 | 362 | 43 | 344 | 1.90e-90 | 276 |
| MS.gene050936.t1 | MTR_7g021530 | 48.913 | 276 | 127 | 4 | 50 | 313 | 47 | 320 | 1.73e-87 | 267 |
| MS.gene050936.t1 | MTR_7g021530 | 48.913 | 276 | 127 | 4 | 50 | 313 | 88 | 361 | 6.10e-87 | 267 |
| MS.gene050936.t1 | MTR_7g080170 | 48.936 | 282 | 114 | 4 | 104 | 361 | 1 | 276 | 2.30e-82 | 257 |
| MS.gene050936.t1 | MTR_1g016620 | 42.671 | 307 | 157 | 5 | 60 | 362 | 38 | 329 | 6.34e-75 | 236 |
| MS.gene050936.t1 | MTR_7g021530 | 41.232 | 211 | 110 | 4 | 50 | 248 | 47 | 255 | 2.12e-47 | 162 |
| MS.gene050936.t1 | MTR_7g021530 | 41.232 | 211 | 110 | 4 | 50 | 248 | 88 | 296 | 7.81e-47 | 162 |
| MS.gene050936.t1 | MTR_6g087000 | 28.571 | 329 | 171 | 6 | 62 | 362 | 90 | 382 | 5.27e-33 | 131 |
| MS.gene050936.t1 | MTR_6g087000 | 27.179 | 390 | 210 | 8 | 11 | 362 | 29 | 382 | 6.34e-33 | 130 |
| MS.gene050936.t1 | MTR_4g118340 | 26.885 | 305 | 171 | 6 | 73 | 359 | 68 | 338 | 4.60e-29 | 116 |
| MS.gene050936.t1 | MTR_2g020970 | 28.358 | 335 | 180 | 9 | 56 | 364 | 44 | 344 | 4.98e-29 | 115 |
| MS.gene050936.t1 | MTR_2g020970 | 28.443 | 334 | 179 | 9 | 57 | 364 | 45 | 344 | 8.99e-29 | 116 |
| MS.gene050936.t1 | MTR_3g105730 | 30.924 | 249 | 118 | 9 | 93 | 338 | 67 | 264 | 4.41e-25 | 103 |
| MS.gene050936.t1 | MTR_3g105730 | 30.400 | 250 | 118 | 9 | 93 | 338 | 45 | 242 | 5.16e-25 | 103 |
| MS.gene050936.t1 | MTR_1g014640 | 31.325 | 249 | 117 | 9 | 93 | 338 | 110 | 307 | 9.54e-25 | 103 |
| MS.gene050936.t1 | MTR_1g013400 | 31.325 | 249 | 117 | 9 | 93 | 338 | 110 | 307 | 9.54e-25 | 103 |
| MS.gene050936.t1 | MTR_2g078760 | 33.455 | 275 | 126 | 12 | 88 | 361 | 35 | 253 | 6.03e-24 | 99.8 |
| MS.gene050936.t1 | MTR_1g115570 | 27.463 | 335 | 174 | 15 | 39 | 366 | 71 | 343 | 1.88e-23 | 100 |
| MS.gene050936.t1 | MTR_2g078760 | 33.455 | 275 | 126 | 12 | 88 | 361 | 114 | 332 | 1.99e-23 | 100 |
| MS.gene050936.t1 | MTR_2g008850 | 39.888 | 178 | 82 | 8 | 183 | 359 | 79 | 232 | 4.76e-23 | 96.7 |
| MS.gene050936.t1 | MTR_2g008850 | 39.888 | 178 | 82 | 8 | 183 | 359 | 125 | 278 | 1.75e-22 | 96.3 |
| MS.gene050936.t1 | MTR_3g068200 | 29.483 | 329 | 182 | 11 | 3 | 321 | 33 | 321 | 4.09e-22 | 97.1 |
| MS.gene050936.t1 | MTR_6g081850 | 31.086 | 267 | 129 | 8 | 94 | 347 | 82 | 306 | 9.21e-22 | 95.1 |
| MS.gene050936.t1 | MTR_3g074610 | 38.916 | 203 | 96 | 10 | 159 | 359 | 103 | 279 | 1.65e-21 | 93.6 |
| MS.gene050936.t1 | MTR_5g009370 | 31.295 | 278 | 131 | 11 | 57 | 323 | 52 | 280 | 4.15e-21 | 93.6 |
| MS.gene050936.t1 | MTR_5g063940 | 39.326 | 178 | 83 | 8 | 183 | 359 | 79 | 232 | 4.42e-21 | 91.3 |
| MS.gene050936.t1 | MTR_5g063940 | 39.326 | 178 | 83 | 8 | 183 | 359 | 126 | 279 | 8.82e-21 | 91.7 |
| MS.gene050936.t1 | MTR_1g050520 | 26.923 | 312 | 172 | 11 | 64 | 369 | 391 | 652 | 8.99e-21 | 94.4 |
| MS.gene050936.t1 | MTR_4g094208 | 36.019 | 211 | 104 | 11 | 154 | 359 | 90 | 274 | 1.46e-20 | 90.9 |
| MS.gene050936.t1 | MTR_8g463130 | 31.868 | 273 | 123 | 13 | 94 | 362 | 69 | 282 | 2.00e-20 | 90.5 |
| MS.gene050936.t1 | MTR_8g463130 | 31.868 | 273 | 123 | 13 | 94 | 362 | 41 | 254 | 2.05e-20 | 90.1 |
| MS.gene050936.t1 | MTR_4g094542 | 32.683 | 205 | 111 | 10 | 158 | 361 | 186 | 364 | 4.85e-20 | 90.9 |
| MS.gene050936.t1 | MTR_5g080680 | 29.134 | 254 | 146 | 7 | 68 | 321 | 109 | 328 | 1.59e-19 | 89.7 |
| MS.gene050936.t1 | MTR_4g125810 | 31.739 | 230 | 120 | 9 | 91 | 320 | 253 | 445 | 4.93e-19 | 89.0 |
| MS.gene050936.t1 | MTR_3g104710 | 29.057 | 265 | 143 | 8 | 59 | 320 | 262 | 484 | 2.07e-18 | 87.0 |
| MS.gene050936.t1 | MTR_3g091060 | 28.041 | 296 | 156 | 9 | 65 | 359 | 99 | 338 | 3.71e-18 | 85.5 |
| MS.gene050936.t1 | MTR_3g464700 | 30.000 | 260 | 131 | 10 | 62 | 320 | 89 | 298 | 1.49e-17 | 83.2 |
| MS.gene050936.t1 | MTR_3g464650 | 28.664 | 307 | 155 | 13 | 62 | 361 | 65 | 314 | 2.42e-17 | 82.4 |
| MS.gene050936.t1 | MTR_1g116260 | 27.414 | 321 | 151 | 14 | 91 | 367 | 80 | 362 | 6.82e-17 | 81.6 |
| MS.gene050936.t1 | MTR_4g116420 | 27.018 | 285 | 156 | 11 | 85 | 364 | 118 | 355 | 5.52e-16 | 79.0 |
| MS.gene050936.t1 | MTR_8g102550 | 30.870 | 230 | 118 | 8 | 91 | 320 | 152 | 340 | 7.29e-16 | 79.0 |
| MS.gene050936.t1 | MTR_1g015110 | 30.901 | 233 | 124 | 9 | 91 | 320 | 290 | 488 | 7.88e-16 | 79.3 |
| MS.gene050936.t1 | MTR_3g107880 | 28.125 | 288 | 135 | 13 | 91 | 364 | 63 | 292 | 8.14e-16 | 77.8 |
| MS.gene050936.t1 | MTR_3g107880 | 28.125 | 288 | 135 | 13 | 91 | 364 | 121 | 350 | 9.74e-16 | 78.2 |
| MS.gene050936.t1 | MTR_3g107880 | 28.125 | 288 | 135 | 13 | 91 | 364 | 120 | 349 | 1.09e-15 | 78.2 |
| MS.gene050936.t1 | MTR_5g071550 | 26.861 | 309 | 174 | 12 | 54 | 361 | 117 | 374 | 1.17e-15 | 78.2 |
| MS.gene050936.t1 | MTR_8g074930 | 30.144 | 209 | 94 | 10 | 193 | 361 | 45 | 241 | 1.51e-15 | 76.6 |
| MS.gene050936.t1 | MTR_1g086350 | 28.571 | 238 | 120 | 11 | 91 | 321 | 118 | 312 | 2.66e-15 | 77.0 |
| MS.gene050936.t1 | MTR_2g040500 | 31.950 | 241 | 124 | 9 | 91 | 319 | 267 | 479 | 2.82e-15 | 77.8 |
| MS.gene050936.t1 | MTR_1g086350 | 28.571 | 238 | 120 | 11 | 91 | 321 | 102 | 296 | 2.84e-15 | 77.0 |
| MS.gene050936.t1 | MTR_3g032660 | 26.586 | 331 | 153 | 13 | 88 | 369 | 65 | 354 | 3.42e-15 | 77.0 |
| MS.gene050936.t1 | MTR_8g074930 | 30.137 | 219 | 101 | 10 | 183 | 361 | 147 | 353 | 3.74e-15 | 76.6 |
| MS.gene050936.t1 | MTR_3g032700 | 26.586 | 331 | 153 | 13 | 88 | 369 | 65 | 354 | 4.50e-15 | 76.6 |
| MS.gene050936.t1 | MTR_1g067210 | 26.603 | 312 | 153 | 10 | 91 | 362 | 76 | 351 | 8.66e-15 | 75.5 |
| MS.gene050936.t1 | MTR_1g028300 | 40.164 | 122 | 56 | 4 | 200 | 321 | 226 | 330 | 1.37e-14 | 75.1 |
| MS.gene050936.t1 | MTR_1g086350 | 33.793 | 145 | 72 | 5 | 182 | 321 | 85 | 210 | 3.25e-14 | 72.8 |
| MS.gene050936.t1 | MTR_1g014190 | 26.070 | 257 | 143 | 7 | 91 | 321 | 52 | 287 | 4.20e-14 | 73.2 |
| MS.gene050936.t1 | MTR_1g014190 | 26.070 | 257 | 143 | 7 | 91 | 321 | 90 | 325 | 6.57e-14 | 72.8 |
| MS.gene050936.t1 | MTR_3g105880 | 27.799 | 259 | 136 | 10 | 91 | 321 | 52 | 287 | 9.68e-14 | 72.0 |
| MS.gene050936.t1 | MTR_1g112840 | 32.195 | 205 | 91 | 9 | 195 | 361 | 161 | 355 | 1.57e-13 | 71.6 |
| MS.gene050936.t1 | MTR_4g123080 | 24.768 | 323 | 178 | 12 | 58 | 363 | 54 | 328 | 1.77e-13 | 71.2 |
| MS.gene050936.t1 | MTR_4g123080 | 24.768 | 323 | 178 | 12 | 58 | 363 | 72 | 346 | 1.84e-13 | 71.6 |
| MS.gene050936.t1 | MTR_3g105880 | 27.799 | 259 | 136 | 10 | 91 | 321 | 52 | 287 | 1.95e-13 | 70.9 |
| MS.gene050936.t1 | MTR_2g078760 | 29.956 | 227 | 109 | 10 | 86 | 311 | 112 | 289 | 2.18e-13 | 70.5 |
| MS.gene050936.t1 | MTR_3g032590 | 29.870 | 231 | 109 | 9 | 181 | 369 | 141 | 360 | 2.61e-13 | 71.2 |
| MS.gene050936.t1 | MTR_1g110210 | 28.159 | 277 | 146 | 15 | 94 | 364 | 71 | 300 | 5.65e-13 | 69.7 |
| MS.gene050936.t1 | MTR_2g033000 | 28.261 | 184 | 104 | 5 | 183 | 357 | 170 | 334 | 8.87e-13 | 69.3 |
| MS.gene050936.t1 | MTR_1g083750 | 30.556 | 216 | 122 | 11 | 165 | 372 | 24 | 219 | 1.27e-12 | 68.6 |
| MS.gene050936.t1 | MTR_7g090530 | 26.449 | 276 | 145 | 12 | 88 | 339 | 66 | 307 | 1.51e-12 | 68.9 |
| MS.gene050936.t1 | MTR_1g083750 | 30.556 | 216 | 122 | 11 | 165 | 372 | 116 | 311 | 1.71e-12 | 68.6 |
| MS.gene050936.t1 | MTR_7g029240 | 36.496 | 137 | 75 | 5 | 182 | 315 | 135 | 262 | 2.33e-12 | 68.2 |
| MS.gene050936.t1 | MTR_4g119830 | 30.337 | 178 | 91 | 4 | 170 | 323 | 264 | 432 | 3.35e-12 | 68.2 |
| MS.gene050936.t1 | MTR_4g007440 | 31.973 | 147 | 73 | 4 | 183 | 321 | 160 | 287 | 5.54e-12 | 67.0 |
| MS.gene050936.t1 | MTR_7g112430 | 35.849 | 159 | 84 | 7 | 182 | 335 | 131 | 276 | 7.78e-12 | 66.6 |
| MS.gene050936.t1 | MTR_1g019760 | 30.198 | 202 | 115 | 10 | 182 | 374 | 128 | 312 | 3.28e-11 | 64.7 |
| MS.gene050936.t1 | MTR_1g019760 | 30.198 | 202 | 115 | 10 | 182 | 374 | 128 | 312 | 5.16e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050936.t1 | AT3G05640 | 72.527 | 364 | 84 | 3 | 1 | 362 | 1 | 350 | 0.0 | 546 |
| MS.gene050936.t1 | AT3G05640 | 72.527 | 364 | 84 | 3 | 1 | 362 | 1 | 350 | 0.0 | 546 |
| MS.gene050936.t1 | AT3G05640 | 72.527 | 364 | 84 | 3 | 1 | 362 | 1 | 350 | 0.0 | 546 |
| MS.gene050936.t1 | AT5G27930 | 70.637 | 361 | 97 | 5 | 1 | 360 | 1 | 353 | 0.0 | 543 |
| MS.gene050936.t1 | AT5G27930 | 70.637 | 361 | 97 | 5 | 1 | 360 | 1 | 353 | 0.0 | 543 |
| MS.gene050936.t1 | AT5G27930 | 71.197 | 309 | 80 | 5 | 1 | 308 | 1 | 301 | 1.42e-165 | 466 |
| MS.gene050936.t1 | AT3G16800 | 54.521 | 365 | 149 | 2 | 1 | 363 | 1 | 350 | 1.13e-138 | 399 |
| MS.gene050936.t1 | AT3G16800 | 54.521 | 365 | 149 | 2 | 1 | 363 | 1 | 350 | 1.13e-138 | 399 |
| MS.gene050936.t1 | AT3G16800 | 54.521 | 365 | 149 | 2 | 1 | 363 | 1 | 350 | 1.13e-138 | 399 |
| MS.gene050936.t1 | AT3G16800 | 58.148 | 270 | 98 | 1 | 94 | 363 | 1 | 255 | 3.06e-107 | 315 |
| MS.gene050936.t1 | AT3G16800 | 58.148 | 270 | 98 | 1 | 94 | 363 | 1 | 255 | 3.06e-107 | 315 |
| MS.gene050936.t1 | AT1G79630 | 45.217 | 345 | 156 | 3 | 50 | 362 | 57 | 400 | 6.03e-107 | 323 |
| MS.gene050936.t1 | AT1G79630 | 45.217 | 345 | 156 | 3 | 50 | 362 | 53 | 396 | 9.11e-107 | 323 |
| MS.gene050936.t1 | AT3G02750 | 43.236 | 377 | 181 | 4 | 14 | 361 | 21 | 393 | 6.61e-105 | 318 |
| MS.gene050936.t1 | AT3G02750 | 43.236 | 377 | 181 | 4 | 14 | 361 | 21 | 393 | 6.61e-105 | 318 |
| MS.gene050936.t1 | AT1G16220 | 46.037 | 328 | 158 | 3 | 50 | 362 | 54 | 377 | 1.14e-104 | 317 |
| MS.gene050936.t1 | AT5G36250 | 46.505 | 329 | 158 | 3 | 50 | 361 | 57 | 384 | 1.27e-102 | 310 |
| MS.gene050936.t1 | AT5G36250 | 44.898 | 343 | 157 | 4 | 50 | 361 | 57 | 398 | 8.59e-99 | 301 |
| MS.gene050936.t1 | AT3G02750 | 39.563 | 412 | 181 | 5 | 14 | 361 | 21 | 428 | 4.20e-97 | 299 |
| MS.gene050936.t1 | AT1G79630 | 45.860 | 314 | 137 | 3 | 81 | 362 | 18 | 330 | 5.29e-97 | 296 |
| MS.gene050936.t1 | AT1G79630 | 45.860 | 314 | 137 | 3 | 81 | 362 | 18 | 330 | 5.29e-97 | 296 |
| MS.gene050936.t1 | AT4G03415 | 46.667 | 315 | 158 | 4 | 63 | 370 | 70 | 381 | 6.41e-97 | 296 |
| MS.gene050936.t1 | AT4G03415 | 46.667 | 315 | 158 | 4 | 63 | 370 | 70 | 381 | 6.41e-97 | 296 |
| MS.gene050936.t1 | AT4G03415 | 46.667 | 315 | 158 | 4 | 63 | 370 | 70 | 381 | 6.41e-97 | 296 |
| MS.gene050936.t1 | AT1G03590 | 45.806 | 310 | 163 | 4 | 55 | 361 | 55 | 362 | 9.82e-96 | 293 |
| MS.gene050936.t1 | AT5G01700 | 43.574 | 319 | 168 | 4 | 51 | 368 | 38 | 345 | 7.22e-90 | 276 |
| MS.gene050936.t1 | AT5G01700 | 44.737 | 304 | 156 | 4 | 66 | 368 | 4 | 296 | 3.58e-89 | 272 |
| MS.gene050936.t1 | AT5G36250 | 46.918 | 292 | 136 | 4 | 50 | 323 | 57 | 347 | 3.43e-86 | 265 |
| MS.gene050936.t1 | AT1G79630 | 44.674 | 291 | 128 | 3 | 104 | 362 | 1 | 290 | 5.09e-83 | 258 |
| MS.gene050936.t1 | AT1G79630 | 44.674 | 291 | 128 | 3 | 104 | 362 | 1 | 290 | 5.09e-83 | 258 |
| MS.gene050936.t1 | AT1G79630 | 44.674 | 291 | 128 | 3 | 104 | 362 | 1 | 290 | 5.09e-83 | 258 |
| MS.gene050936.t1 | AT1G79630 | 44.674 | 291 | 128 | 3 | 104 | 362 | 1 | 290 | 5.09e-83 | 258 |
| MS.gene050936.t1 | AT4G32950 | 41.801 | 311 | 152 | 5 | 59 | 368 | 41 | 323 | 3.78e-76 | 238 |
| MS.gene050936.t1 | AT5G26010 | 43.042 | 309 | 154 | 6 | 60 | 367 | 43 | 330 | 8.58e-73 | 230 |
| MS.gene050936.t1 | AT3G16800 | 49.145 | 234 | 102 | 2 | 1 | 232 | 1 | 219 | 4.23e-70 | 220 |
| MS.gene050936.t1 | AT4G32950 | 42.629 | 251 | 115 | 5 | 59 | 308 | 41 | 263 | 2.22e-58 | 191 |
| MS.gene050936.t1 | AT2G20050 | 29.358 | 327 | 166 | 8 | 62 | 361 | 109 | 397 | 3.01e-33 | 132 |
| MS.gene050936.t1 | AT2G20050 | 29.358 | 327 | 166 | 8 | 62 | 361 | 109 | 397 | 3.59e-33 | 131 |
| MS.gene050936.t1 | AT3G06270 | 29.373 | 303 | 155 | 8 | 50 | 326 | 40 | 309 | 4.28e-29 | 115 |
| MS.gene050936.t1 | AT2G20630 | 34.432 | 273 | 122 | 13 | 88 | 359 | 60 | 276 | 3.91e-26 | 106 |
| MS.gene050936.t1 | AT2G20630 | 34.559 | 272 | 121 | 13 | 88 | 358 | 60 | 275 | 9.60e-26 | 105 |
| MS.gene050936.t1 | AT5G10740 | 30.882 | 272 | 134 | 8 | 91 | 362 | 64 | 281 | 4.48e-25 | 105 |
| MS.gene050936.t1 | AT5G10740 | 30.882 | 272 | 134 | 8 | 91 | 362 | 64 | 281 | 4.48e-25 | 105 |
| MS.gene050936.t1 | AT5G24940 | 30.996 | 271 | 133 | 8 | 91 | 361 | 64 | 280 | 5.75e-25 | 105 |
| MS.gene050936.t1 | AT4G28400 | 31.429 | 280 | 129 | 13 | 87 | 362 | 41 | 261 | 6.18e-24 | 100 |
| MS.gene050936.t1 | AT4G31750 | 30.588 | 255 | 120 | 10 | 93 | 344 | 66 | 266 | 9.46e-24 | 100 |
| MS.gene050936.t1 | AT4G31750 | 30.588 | 255 | 120 | 10 | 93 | 344 | 66 | 266 | 9.46e-24 | 100 |
| MS.gene050936.t1 | AT4G28400 | 32.234 | 273 | 122 | 13 | 94 | 362 | 70 | 283 | 9.85e-24 | 99.8 |
| MS.gene050936.t1 | AT4G31750 | 30.196 | 255 | 121 | 9 | 93 | 344 | 66 | 266 | 1.17e-23 | 100 |
| MS.gene050936.t1 | AT5G59220 | 33.755 | 237 | 109 | 9 | 91 | 321 | 148 | 342 | 8.46e-22 | 96.7 |
| MS.gene050936.t1 | AT1G78200 | 34.314 | 204 | 111 | 8 | 157 | 359 | 54 | 235 | 3.77e-20 | 89.0 |
| MS.gene050936.t1 | AT1G78200 | 34.314 | 204 | 111 | 8 | 157 | 359 | 54 | 235 | 3.77e-20 | 89.0 |
| MS.gene050936.t1 | AT2G25620 | 29.861 | 288 | 148 | 12 | 91 | 372 | 128 | 367 | 3.96e-20 | 91.3 |
| MS.gene050936.t1 | AT2G25620 | 29.861 | 288 | 148 | 12 | 91 | 372 | 128 | 367 | 3.96e-20 | 91.3 |
| MS.gene050936.t1 | AT1G43900 | 28.938 | 273 | 143 | 9 | 65 | 336 | 128 | 350 | 5.70e-20 | 90.9 |
| MS.gene050936.t1 | AT1G34750 | 36.111 | 180 | 90 | 8 | 183 | 361 | 126 | 281 | 6.22e-20 | 89.4 |
| MS.gene050936.t1 | AT1G34750 | 36.111 | 180 | 90 | 8 | 183 | 361 | 126 | 281 | 6.22e-20 | 89.4 |
| MS.gene050936.t1 | AT1G34750 | 36.111 | 180 | 90 | 8 | 183 | 361 | 126 | 281 | 6.22e-20 | 89.4 |
| MS.gene050936.t1 | AT1G78200 | 34.314 | 204 | 111 | 8 | 157 | 359 | 99 | 280 | 6.64e-20 | 89.4 |
| MS.gene050936.t1 | AT1G78200 | 34.314 | 204 | 111 | 8 | 157 | 359 | 99 | 280 | 6.64e-20 | 89.4 |
| MS.gene050936.t1 | AT1G78200 | 34.314 | 204 | 111 | 8 | 157 | 359 | 99 | 280 | 6.64e-20 | 89.4 |
| MS.gene050936.t1 | AT5G53140 | 27.324 | 355 | 200 | 13 | 9 | 362 | 52 | 349 | 1.07e-19 | 90.5 |
| MS.gene050936.t1 | AT5G53140 | 27.324 | 355 | 200 | 13 | 9 | 362 | 52 | 349 | 1.07e-19 | 90.5 |
| MS.gene050936.t1 | AT1G07430 | 30.328 | 244 | 111 | 9 | 91 | 321 | 157 | 354 | 1.97e-19 | 89.7 |
| MS.gene050936.t1 | AT3G15260 | 37.640 | 178 | 86 | 8 | 183 | 359 | 133 | 286 | 7.20e-19 | 86.3 |
| MS.gene050936.t1 | AT3G15260 | 37.640 | 178 | 86 | 8 | 183 | 359 | 133 | 286 | 7.20e-19 | 86.3 |
| MS.gene050936.t1 | AT3G11410 | 30.488 | 246 | 122 | 9 | 87 | 320 | 133 | 341 | 1.47e-18 | 87.0 |
| MS.gene050936.t1 | AT3G62260 | 30.037 | 273 | 141 | 13 | 91 | 357 | 27 | 255 | 1.63e-18 | 85.5 |
| MS.gene050936.t1 | AT3G62260 | 29.818 | 275 | 143 | 13 | 91 | 359 | 117 | 347 | 3.92e-18 | 85.5 |
| MS.gene050936.t1 | AT3G62260 | 29.818 | 275 | 143 | 13 | 91 | 359 | 116 | 346 | 4.28e-18 | 85.5 |
| MS.gene050936.t1 | AT2G40180 | 27.707 | 314 | 165 | 14 | 58 | 362 | 126 | 386 | 4.90e-18 | 85.1 |
| MS.gene050936.t1 | AT4G26080 | 31.687 | 243 | 126 | 9 | 78 | 320 | 159 | 361 | 2.42e-17 | 83.6 |
| MS.gene050936.t1 | AT5G57050 | 30.870 | 230 | 121 | 9 | 91 | 320 | 120 | 311 | 2.80e-17 | 82.8 |
| MS.gene050936.t1 | AT5G57050 | 30.870 | 230 | 121 | 9 | 91 | 320 | 160 | 351 | 3.48e-17 | 83.2 |
| MS.gene050936.t1 | AT2G34740 | 34.078 | 179 | 94 | 9 | 182 | 359 | 177 | 332 | 3.60e-17 | 82.0 |
| MS.gene050936.t1 | AT1G67820 | 28.873 | 284 | 152 | 11 | 49 | 332 | 75 | 308 | 1.77e-16 | 80.9 |
| MS.gene050936.t1 | AT3G51370 | 30.435 | 207 | 96 | 8 | 193 | 361 | 72 | 268 | 1.90e-16 | 79.3 |
| MS.gene050936.t1 | AT1G67820 | 29.304 | 273 | 143 | 11 | 49 | 321 | 111 | 333 | 2.58e-16 | 80.5 |
| MS.gene050936.t1 | AT3G55050 | 31.731 | 208 | 88 | 10 | 196 | 362 | 165 | 359 | 3.16e-16 | 79.7 |
| MS.gene050936.t1 | AT3G55050 | 31.731 | 208 | 88 | 10 | 196 | 362 | 165 | 359 | 3.16e-16 | 79.7 |
| MS.gene050936.t1 | AT1G22280 | 34.270 | 178 | 92 | 8 | 183 | 359 | 131 | 284 | 3.53e-16 | 78.6 |
| MS.gene050936.t1 | AT1G22280 | 34.270 | 178 | 92 | 8 | 183 | 359 | 125 | 278 | 3.70e-16 | 78.6 |
| MS.gene050936.t1 | AT3G51470 | 25.507 | 345 | 173 | 13 | 50 | 372 | 12 | 294 | 4.87e-16 | 78.6 |
| MS.gene050936.t1 | AT5G51760 | 38.000 | 150 | 76 | 4 | 171 | 320 | 189 | 321 | 5.14e-16 | 79.3 |
| MS.gene050936.t1 | AT1G48040 | 29.617 | 287 | 150 | 12 | 91 | 369 | 116 | 358 | 5.70e-16 | 79.0 |
| MS.gene050936.t1 | AT3G51370 | 26.537 | 309 | 155 | 13 | 91 | 361 | 79 | 353 | 5.72e-16 | 79.0 |
| MS.gene050936.t1 | AT3G51370 | 26.537 | 309 | 155 | 13 | 91 | 361 | 79 | 353 | 5.72e-16 | 79.0 |
| MS.gene050936.t1 | AT3G51470 | 25.507 | 345 | 173 | 13 | 50 | 372 | 56 | 338 | 6.15e-16 | 79.0 |
| MS.gene050936.t1 | AT5G51760 | 38.000 | 150 | 76 | 4 | 171 | 320 | 219 | 351 | 6.73e-16 | 79.0 |
| MS.gene050936.t1 | AT2G30020 | 27.508 | 309 | 158 | 13 | 62 | 361 | 141 | 392 | 1.55e-15 | 77.8 |
| MS.gene050936.t1 | AT3G17250 | 25.000 | 292 | 162 | 10 | 89 | 369 | 156 | 401 | 1.61e-15 | 78.2 |
| MS.gene050936.t1 | AT1G47380 | 32.653 | 196 | 109 | 9 | 182 | 372 | 127 | 304 | 2.71e-15 | 77.4 |
| MS.gene050936.t1 | AT1G07160 | 28.155 | 309 | 157 | 14 | 62 | 361 | 124 | 376 | 2.86e-15 | 77.0 |
| MS.gene050936.t1 | AT1G72770 | 30.279 | 251 | 112 | 9 | 91 | 320 | 238 | 446 | 4.15e-15 | 77.0 |
| MS.gene050936.t1 | AT1G72770 | 30.279 | 251 | 112 | 9 | 91 | 320 | 238 | 446 | 4.15e-15 | 77.0 |
| MS.gene050936.t1 | AT1G72770 | 30.279 | 251 | 112 | 9 | 91 | 320 | 238 | 446 | 4.15e-15 | 77.0 |
| MS.gene050936.t1 | AT2G40860 | 28.899 | 218 | 127 | 8 | 158 | 369 | 363 | 558 | 5.75e-15 | 76.6 |
| MS.gene050936.t1 | AT2G33700 | 27.869 | 305 | 141 | 12 | 39 | 320 | 58 | 306 | 7.83e-15 | 75.5 |
| MS.gene050936.t1 | AT2G40860 | 28.899 | 218 | 127 | 8 | 158 | 369 | 461 | 656 | 8.43e-15 | 76.3 |
| MS.gene050936.t1 | AT1G18030 | 27.413 | 259 | 137 | 9 | 94 | 339 | 112 | 332 | 6.31e-14 | 72.8 |
| MS.gene050936.t1 | AT1G17550 | 27.572 | 243 | 128 | 6 | 91 | 319 | 237 | 445 | 8.22e-14 | 73.2 |
| MS.gene050936.t1 | AT1G17550 | 27.572 | 243 | 128 | 6 | 91 | 319 | 237 | 445 | 8.22e-14 | 73.2 |
| MS.gene050936.t1 | AT5G66080 | 29.902 | 204 | 95 | 9 | 196 | 361 | 59 | 252 | 1.14e-13 | 71.2 |
| MS.gene050936.t1 | AT5G66080 | 29.902 | 204 | 95 | 9 | 196 | 361 | 163 | 356 | 2.05e-13 | 71.2 |
| MS.gene050936.t1 | AT2G34740 | 33.113 | 151 | 83 | 8 | 182 | 330 | 191 | 325 | 2.58e-13 | 70.5 |
| MS.gene050936.t1 | AT2G34740 | 33.113 | 151 | 83 | 8 | 182 | 330 | 173 | 307 | 2.73e-13 | 70.5 |
| MS.gene050936.t1 | AT3G12620 | 31.373 | 204 | 92 | 9 | 196 | 361 | 164 | 357 | 5.12e-13 | 70.1 |
| MS.gene050936.t1 | AT3G12620 | 31.373 | 204 | 92 | 9 | 196 | 361 | 164 | 357 | 5.12e-13 | 70.1 |
| MS.gene050936.t1 | AT4G28400 | 29.730 | 222 | 100 | 11 | 94 | 311 | 70 | 239 | 5.71e-13 | 68.6 |
| MS.gene050936.t1 | AT4G31860 | 27.132 | 258 | 139 | 9 | 91 | 321 | 52 | 287 | 6.13e-13 | 69.7 |
| MS.gene050936.t1 | AT1G18030 | 27.753 | 227 | 117 | 8 | 94 | 311 | 112 | 300 | 6.32e-13 | 69.3 |
| MS.gene050936.t1 | AT4G31860 | 27.132 | 258 | 139 | 9 | 91 | 321 | 52 | 287 | 7.16e-13 | 68.9 |
| MS.gene050936.t1 | AT2G40860 | 28.962 | 183 | 109 | 6 | 158 | 334 | 461 | 628 | 8.26e-13 | 70.1 |
| MS.gene050936.t1 | AT5G02760 | 28.230 | 209 | 94 | 8 | 196 | 363 | 153 | 346 | 9.73e-13 | 69.3 |
| MS.gene050936.t1 | AT2G25070 | 26.848 | 257 | 141 | 9 | 91 | 321 | 52 | 287 | 1.07e-12 | 68.9 |
| MS.gene050936.t1 | AT2G25070 | 26.848 | 257 | 141 | 9 | 91 | 321 | 52 | 287 | 1.07e-12 | 68.9 |
| MS.gene050936.t1 | AT4G38520 | 30.244 | 205 | 93 | 10 | 196 | 361 | 162 | 355 | 1.14e-12 | 69.3 |
| MS.gene050936.t1 | AT4G38520 | 30.244 | 205 | 93 | 10 | 196 | 361 | 162 | 355 | 1.14e-12 | 69.3 |
| MS.gene050936.t1 | AT5G06750 | 28.141 | 199 | 110 | 7 | 195 | 361 | 162 | 359 | 2.73e-11 | 65.1 |
| MS.gene050936.t1 | AT5G06750 | 28.141 | 199 | 110 | 7 | 195 | 361 | 162 | 359 | 2.73e-11 | 65.1 |
| MS.gene050936.t1 | AT5G06750 | 29.808 | 208 | 95 | 10 | 195 | 361 | 80 | 277 | 3.95e-11 | 63.9 |
Find 77 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGATTAAATTATAGGAATT+TGG | 0.150752 | 7.1:+3618538 | MS.gene050936:intron |
| GATTATTGTATTAAAGATTA+TGG | 0.199525 | 7.1:+3619659 | MS.gene050936:CDS |
| GGTTCCTTTCTGACCTCTTT+TGG | 0.202885 | 7.1:-3618190 | None:intergenic |
| CTTGCCATGTCAAGGGCTTT+TGG | 0.208056 | 7.1:+3619635 | MS.gene050936:CDS |
| CATTGACTCTCTTACTCTTT+TGG | 0.217341 | 7.1:-3618626 | None:intergenic |
| AAGTACTAACGAGGTAAATT+TGG | 0.252923 | 7.1:-3619437 | None:intergenic |
| AACAACAAAGATTCAATATA+TGG | 0.311956 | 7.1:+3618755 | MS.gene050936:CDS |
| ATCCTCTATGTTCAATGGTT+TGG | 0.312680 | 7.1:+3618008 | MS.gene050936:CDS |
| GTCTATTTAACAGTTTCAAT+TGG | 0.327269 | 7.1:-3620438 | None:intergenic |
| AATGTCTACTGCTTCTTGAT+TGG | 0.329653 | 7.1:-3620262 | None:intergenic |
| TCTGGCACTATTAATGTTGA+TGG | 0.338334 | 7.1:+3618141 | MS.gene050936:CDS |
| GCTATCTTGCTCAGGGGAAA+TGG | 0.343840 | 7.1:-3620415 | None:intergenic |
| CATTTATCCTCTATGTTCAA+TGG | 0.363846 | 7.1:+3618003 | MS.gene050936:CDS |
| ATATTCTGCGGTATATTTGA+TGG | 0.364778 | 7.1:+3618577 | MS.gene050936:CDS |
| ATATTCCTCTGAGTTACTTC+AGG | 0.378333 | 7.1:-3619695 | None:intergenic |
| ATCAGACGATGATGGAAGTT+TGG | 0.389577 | 7.1:+3619385 | MS.gene050936:CDS |
| CAAGGTCTTTGCTATGCAAT+TGG | 0.407044 | 7.1:+3618650 | MS.gene050936:CDS |
| TTTGTTGTGCTTGCCACTGA+TGG | 0.408199 | 7.1:+3619734 | MS.gene050936:CDS |
| CACCATGCAACAGTCTTGAT+TGG | 0.411872 | 7.1:-3618211 | None:intergenic |
| TCAATTGGGCTATCTTGCTC+AGG | 0.413365 | 7.1:-3620423 | None:intergenic |
| TATTTGATGGACACGGGCCA+TGG | 0.420048 | 7.1:+3618590 | MS.gene050936:CDS |
| CTATCTTGCTCAGGGGAAAT+GGG | 0.431506 | 7.1:-3620414 | None:intergenic |
| TCTATTTAACAGTTTCAATT+GGG | 0.444557 | 7.1:-3620437 | None:intergenic |
| GCCCTTGACATGGCAAGTCC+TGG | 0.445151 | 7.1:-3619629 | None:intergenic |
| AGCAAAATCAGCTAAACGTT+TGG | 0.451570 | 7.1:+3620305 | MS.gene050936:CDS |
| ATGCTCAAGTTCTTGATCAA+TGG | 0.462238 | 7.1:-3618806 | None:intergenic |
| TGGTGACTCTCGTGCAGTAC+TGG | 0.463725 | 7.1:+3619355 | MS.gene050936:CDS |
| TTGTTGTGCTTGCCACTGAT+GGG | 0.475803 | 7.1:+3619735 | MS.gene050936:CDS |
| TGCCCTCTCAATTGTTAGAC+AGG | 0.479242 | 7.1:+3618864 | MS.gene050936:CDS |
| CAGTGGCAAGCACAACAAAC+TGG | 0.480296 | 7.1:-3619730 | None:intergenic |
| AACCAGGAGTGCATAGGGTC+TGG | 0.482895 | 7.1:+3619588 | MS.gene050936:CDS |
| AACCAGACCCTATGCACTCC+TGG | 0.483257 | 7.1:-3619590 | None:intergenic |
| CGCAGAATATCATGTCCTCT+TGG | 0.484795 | 7.1:-3618564 | None:intergenic |
| ATTTGATGGACACGGGCCAT+GGG | 0.489246 | 7.1:+3618591 | MS.gene050936:CDS |
| AATAGCAGAAATATCATCAA+TGG | 0.495485 | 7.1:-3620373 | None:intergenic |
| CTCCAGGACTTGCCATGTCA+AGG | 0.496930 | 7.1:+3619627 | MS.gene050936:CDS |
| TTCTCCAAAAGAGGTCAGAA+AGG | 0.500364 | 7.1:+3618186 | MS.gene050936:CDS |
| AGTCCTGGAGACTCTACATC+TGG | 0.508363 | 7.1:-3619614 | None:intergenic |
| TGATGAACCAGGAGTGCATA+GGG | 0.509549 | 7.1:+3619583 | MS.gene050936:CDS |
| TTACCAGATGTAGAGTCTCC+AGG | 0.526827 | 7.1:+3619611 | MS.gene050936:CDS |
| TGCATGGAAACGCAAGAGAA+GGG | 0.527483 | 7.1:+3620344 | MS.gene050936:CDS |
| GAGAGAATAATTCAGTGTCA+AGG | 0.530299 | 7.1:+3619542 | MS.gene050936:CDS |
| ATCAAGACTGTTGCATGGTG+TGG | 0.533904 | 7.1:+3618214 | MS.gene050936:CDS |
| CAATTGGGCTATCTTGCTCA+GGG | 0.538157 | 7.1:-3620422 | None:intergenic |
| ATCACTTGACGATCATGTAA+AGG | 0.552534 | 7.1:+3618699 | MS.gene050936:CDS |
| GAGAGAAGCTGTTGAAGCAA+TGG | 0.555010 | 7.1:+3618080 | MS.gene050936:CDS |
| TGCGGTATATTTGATGGACA+CGG | 0.560385 | 7.1:+3618583 | MS.gene050936:CDS |
| TCCAGGACTTGCCATGTCAA+GGG | 0.561968 | 7.1:+3619628 | MS.gene050936:CDS |
| GCTACAACATCAGACGATGA+TGG | 0.562423 | 7.1:+3619377 | MS.gene050936:CDS |
| ATGCATGGAAACGCAAGAGA+AGG | 0.563663 | 7.1:+3620343 | MS.gene050936:CDS |
| TACCTGTCTAACAATTGAGA+GGG | 0.565339 | 7.1:-3618866 | None:intergenic |
| AAAATCAGCTAAACGTTTGG+TGG | 0.569397 | 7.1:+3620308 | MS.gene050936:CDS |
| TGCCAAACCATTGAACATAG+AGG | 0.573400 | 7.1:-3618010 | None:intergenic |
| CAATTGCATAGCAAAGACCT+TGG | 0.578108 | 7.1:-3618649 | None:intergenic |
| GAAATTCTGTGAGATGTGAA+AGG | 0.584077 | 7.1:+3618058 | MS.gene050936:CDS |
| GCGGTATATTTGATGGACAC+GGG | 0.590895 | 7.1:+3618584 | MS.gene050936:CDS |
| CTTGCTCAGGGGAAATGGGA+GGG | 0.592417 | 7.1:-3620410 | None:intergenic |
| AGAGAATAATTCAGTGTCAA+GGG | 0.594886 | 7.1:+3619543 | MS.gene050936:CDS |
| TCTTGCTCAGGGGAAATGGG+AGG | 0.601493 | 7.1:-3620411 | None:intergenic |
| TGTTGTGCTTGCCACTGATG+GGG | 0.603053 | 7.1:+3619736 | MS.gene050936:CDS |
| TTACCTGTCTAACAATTGAG+AGG | 0.603400 | 7.1:-3618867 | None:intergenic |
| TTGGCTACAAAGTGACCCCA+TGG | 0.606377 | 7.1:-3618607 | None:intergenic |
| GAGTAAGAGAGTCAATGCCA+AGG | 0.613440 | 7.1:+3618632 | MS.gene050936:CDS |
| ATGATGAACCAGGAGTGCAT+AGG | 0.615902 | 7.1:+3619582 | MS.gene050936:CDS |
| ATCTCCAAAAGCCCTTGACA+TGG | 0.615912 | 7.1:-3619639 | None:intergenic |
| TCAAGACTGTTGCATGGTGT+GGG | 0.621717 | 7.1:+3618215 | MS.gene050936:CDS |
| TGGAATGTGCAGTACATGCA+TGG | 0.626814 | 7.1:+3620328 | MS.gene050936:CDS |
| AACCAATCAAGACTGTTGCA+TGG | 0.651730 | 7.1:+3618209 | MS.gene050936:CDS |
| GCATGGAAACGCAAGAGAAG+GGG | 0.652422 | 7.1:+3620345 | MS.gene050936:CDS |
| TTCTGTTTAAATGATGAACC+AGG | 0.665974 | 7.1:+3619572 | MS.gene050936:CDS |
| CAAGATACTTACCCCATCAG+TGG | 0.666268 | 7.1:-3619747 | None:intergenic |
| CAAGAGGACATGATATTCTG+CGG | 0.676913 | 7.1:+3618565 | MS.gene050936:CDS |
| ATAGGAATTTGGATGCCAAG+AGG | 0.678718 | 7.1:+3618549 | MS.gene050936:intron |
| TTTGATGGACACGGGCCATG+GGG | 0.686895 | 7.1:+3618592 | MS.gene050936:CDS |
| AGACTGTTGCATGGTGTGGG+AGG | 0.695512 | 7.1:+3618218 | MS.gene050936:CDS |
| AATTGGGCTATCTTGCTCAG+GGG | 0.712499 | 7.1:-3620421 | None:intergenic |
| CAGTACCTGAAGTAACTCAG+AGG | 0.714319 | 7.1:+3619690 | MS.gene050936:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTGAGATTAAATATGT+TGG | + | chr7.1:3619930-3619949 | MS.gene050936:intron | 15.0% |
| !! | ACAAATAAATAAATAATCAC+CGG | + | chr7.1:3620090-3620109 | MS.gene050936:intron | 15.0% |
| !! | ATATCAAAGACAAATAAAAT+GGG | - | chr7.1:3618466-3618485 | None:intergenic | 15.0% |
| !! | GATTATTGTATTAAAGATTA+TGG | + | chr7.1:3619659-3619678 | MS.gene050936:CDS | 15.0% |
| !! | TATATCAAAGACAAATAAAA+TGG | - | chr7.1:3618467-3618486 | None:intergenic | 15.0% |
| !! | TTTGATATAAAATTCAATTC+TGG | + | chr7.1:3618478-3618497 | MS.gene050936:intron | 15.0% |
| !!! | AGTTAATTATGTTTTTAGTT+TGG | - | chr7.1:3620164-3620183 | None:intergenic | 15.0% |
| !!! | TTATCTATTTATTTGTTATC+TGG | - | chr7.1:3620030-3620049 | None:intergenic | 15.0% |
| !! | AACAACAAAGATTCAATATA+TGG | + | chr7.1:3618755-3618774 | MS.gene050936:CDS | 20.0% |
| !! | ACGATTAAATTATAGGAATT+TGG | + | chr7.1:3618538-3618557 | MS.gene050936:intron | 20.0% |
| !! | TAATTTAATCGTCAATAGAT+AGG | - | chr7.1:3618530-3618549 | None:intergenic | 20.0% |
| !! | TCTATTGACGATTAAATTAT+AGG | + | chr7.1:3618531-3618550 | MS.gene050936:intron | 20.0% |
| !! | TTAAATTTATTGCTGAAATG+TGG | + | chr7.1:3620185-3620204 | MS.gene050936:intron | 20.0% |
| !!! | AATCATAGTAACTAGTTTAT+AGG | - | chr7.1:3619774-3619793 | None:intergenic | 20.0% |
| !!! | TGGGTTGATTATAAATATAT+AGG | - | chr7.1:3618447-3618466 | None:intergenic | 20.0% |
| !!! | TTATTTTATAATGGTTTGCA+GGG | + | chr7.1:3619308-3619327 | MS.gene050936:intron | 20.0% |
| !!! | TTTATTTTATAATGGTTTGC+AGG | + | chr7.1:3619307-3619326 | MS.gene050936:intron | 20.0% |
| ! | AATAGCAGAAATATCATCAA+TGG | - | chr7.1:3620376-3620395 | None:intergenic | 25.0% |
| ! | ATTTGTTCATGTTACAAGTT+TGG | - | chr7.1:3619154-3619173 | None:intergenic | 25.0% |
| ! | GATATAAAATTCAATTCTGG+TGG | + | chr7.1:3618481-3618500 | MS.gene050936:intron | 25.0% |
| ! | TCTGCTAACTAGTATATATA+CGG | - | chr7.1:3618949-3618968 | None:intergenic | 25.0% |
| ! | TGAGACATTTAGATTATGAT+TGG | + | chr7.1:3619988-3620007 | MS.gene050936:intron | 25.0% |
| !! | AGATCATTTTCACTAAAGAA+AGG | + | chr7.1:3618033-3618052 | MS.gene050936:CDS | 25.0% |
| !! | GAGTTTATTGTTGTCAATTT+TGG | - | chr7.1:3619894-3619913 | None:intergenic | 25.0% |
| !! | TTTTAATGAATTTCTCCCTA+CGG | - | chr7.1:3618918-3618937 | None:intergenic | 25.0% |
| !!! | AATAAATAGAAGTACTAACG+AGG | - | chr7.1:3619449-3619468 | None:intergenic | 25.0% |
| !!! | TATTTTATAATGGTTTGCAG+GGG | + | chr7.1:3619309-3619328 | MS.gene050936:intron | 25.0% |
| AACAATATAGTTGCGATGTT+AGG | + | chr7.1:3618978-3618997 | MS.gene050936:intron | 30.0% | |
| AACTTCACTGATATATTGGT+TGG | - | chr7.1:3619260-3619279 | None:intergenic | 30.0% | |
| AAGTACTAACGAGGTAAATT+TGG | - | chr7.1:3619440-3619459 | None:intergenic | 30.0% | |
| ACAATATAGTTGCGATGTTA+GGG | + | chr7.1:3618979-3618998 | MS.gene050936:intron | 30.0% | |
| AGAGAATAATTCAGTGTCAA+GGG | + | chr7.1:3619543-3619562 | MS.gene050936:CDS | 30.0% | |
| ATATTCTGCGGTATATTTGA+TGG | + | chr7.1:3618577-3618596 | MS.gene050936:CDS | 30.0% | |
| CAAGAACTTCACTGATATAT+TGG | - | chr7.1:3619264-3619283 | None:intergenic | 30.0% | |
| CATTTATCCTCTATGTTCAA+TGG | + | chr7.1:3618003-3618022 | MS.gene050936:CDS | 30.0% | |
| GTAATCCAATTCCATCAAAT+AGG | - | chr7.1:3619051-3619070 | None:intergenic | 30.0% | |
| GTTACAAGTTTGGTAAATGT+AGG | - | chr7.1:3619144-3619163 | None:intergenic | 30.0% | |
| TAATTGCATAATTGCAGAAG+AGG | + | chr7.1:3619517-3619536 | MS.gene050936:intron | 30.0% | |
| TACATGTTTGTATACACGTT+GGG | - | chr7.1:3618407-3618426 | None:intergenic | 30.0% | |
| TTCTGTTTAAATGATGAACC+AGG | + | chr7.1:3619572-3619591 | MS.gene050936:CDS | 30.0% | |
| TTGAAGGTTAAACAAACTCA+CGG | - | chr7.1:3618343-3618362 | None:intergenic | 30.0% | |
| ! | ACATGAACAAATTGATGACA+TGG | + | chr7.1:3619162-3619181 | MS.gene050936:intron | 30.0% |
| ! | ACATGTACTCGTTACATTTT+TGG | + | chr7.1:3618420-3618439 | MS.gene050936:intron | 30.0% |
| !! | ATGTCTTTGAAATAAGTGCT+GGG | + | chr7.1:3619008-3619027 | MS.gene050936:intron | 30.0% |
| !! | ATTTTATAATGGTTTGCAGG+GGG | + | chr7.1:3619310-3619329 | MS.gene050936:intron | 30.0% |
| !! | TATGTCTTTGAAATAAGTGC+TGG | + | chr7.1:3619007-3619026 | MS.gene050936:intron | 30.0% |
| AAAATCAGCTAAACGTTTGG+TGG | + | chr7.1:3620308-3620327 | MS.gene050936:CDS | 35.0% | |
| AACAATAAACTCTCACACAC+AGG | + | chr7.1:3619902-3619921 | MS.gene050936:intron | 35.0% | |
| AATGTCTACTGCTTCTTGAT+TGG | - | chr7.1:3620265-3620284 | None:intergenic | 35.0% | |
| AGCAAAATCAGCTAAACGTT+TGG | + | chr7.1:3620305-3620324 | MS.gene050936:CDS | 35.0% | |
| ATATTCCTCTGAGTTACTTC+AGG | - | chr7.1:3619698-3619717 | None:intergenic | 35.0% | |
| ATCACTTGACGATCATGTAA+AGG | + | chr7.1:3618699-3618718 | MS.gene050936:CDS | 35.0% | |
| ATCCTCTATGTTCAATGGTT+TGG | + | chr7.1:3618008-3618027 | MS.gene050936:CDS | 35.0% | |
| ATCTTGATCAAATACCGATC+TGG | - | chr7.1:3619191-3619210 | None:intergenic | 35.0% | |
| ATGCTCAAGTTCTTGATCAA+TGG | - | chr7.1:3618809-3618828 | None:intergenic | 35.0% | |
| ATTACAATTTGGCAGTTGAC+TGG | + | chr7.1:3620117-3620136 | MS.gene050936:intron | 35.0% | |
| CTCTTGTAGAAATGAAACTC+TGG | + | chr7.1:3619864-3619883 | MS.gene050936:intron | 35.0% | |
| CTGCCAAATTGTAATATGAC+CGG | - | chr7.1:3620112-3620131 | None:intergenic | 35.0% | |
| GAAATTCTGTGAGATGTGAA+AGG | + | chr7.1:3618058-3618077 | MS.gene050936:CDS | 35.0% | |
| GAGAGAATAATTCAGTGTCA+AGG | + | chr7.1:3619542-3619561 | MS.gene050936:CDS | 35.0% | |
| GGAGTTACATTAAGTACTTG+TGG | + | chr7.1:3620206-3620225 | MS.gene050936:intron | 35.0% | |
| GTACATGTTTGTATACACGT+TGG | - | chr7.1:3618408-3618427 | None:intergenic | 35.0% | |
| GTTAATCATCTGCATCATTC+TGG | + | chr7.1:3618503-3618522 | MS.gene050936:intron | 35.0% | |
| TACCTGTCTAACAATTGAGA+GGG | - | chr7.1:3618869-3618888 | None:intergenic | 35.0% | |
| TCACCGGTCATATTACAATT+TGG | + | chr7.1:3620106-3620125 | MS.gene050936:intron | 35.0% | |
| TCTGGCACTATTAATGTTGA+TGG | + | chr7.1:3618141-3618160 | MS.gene050936:CDS | 35.0% | |
| TCTGTCCTATTTGATGGAAT+TGG | + | chr7.1:3619043-3619062 | MS.gene050936:intron | 35.0% | |
| TGACAAAAGCTACACTTTGA+AGG | - | chr7.1:3618359-3618378 | None:intergenic | 35.0% | |
| TTACCTGTCTAACAATTGAG+AGG | - | chr7.1:3618870-3618889 | None:intergenic | 35.0% | |
| ! | ACGGTTTTCATAGCAAATGT+TGG | + | chr7.1:3619335-3619354 | MS.gene050936:CDS | 35.0% |
| ! | TAAGAGCTTGTTTCGAATTG+CGG | + | chr7.1:3618292-3618311 | MS.gene050936:intron | 35.0% |
| !! | AAGTTTGACTCGTTTTACAG+TGG | + | chr7.1:3618835-3618854 | MS.gene050936:CDS | 35.0% |
| !! | AATAAGTGCTGGGATAACAA+TGG | + | chr7.1:3619018-3619037 | MS.gene050936:intron | 35.0% |
| !! | TTAGCTGATTTTGCTTTGTC+TGG | - | chr7.1:3620300-3620319 | None:intergenic | 35.0% |
| !! | TTGTTTTGTGATGCAGGTTT+GGG | + | chr7.1:3620230-3620249 | MS.gene050936:intron | 35.0% |
| !! | TTTAGTTTGGTTCAACCAGT+TGG | - | chr7.1:3620151-3620170 | None:intergenic | 35.0% |
| !!! | CATTGACTCTCTTACTCTTT+TGG | - | chr7.1:3618629-3618648 | None:intergenic | 35.0% |
| !!! | TTTGTTTTGTGATGCAGGTT+TGG | + | chr7.1:3620229-3620248 | MS.gene050936:intron | 35.0% |
| AACAACTTTCGAGAATCCGT+AGG | + | chr7.1:3618899-3618918 | MS.gene050936:intron | 40.0% | |
| AACCAATCAAGACTGTTGCA+TGG | + | chr7.1:3618209-3618228 | MS.gene050936:CDS | 40.0% | |
| ACAACTTTCGAGAATCCGTA+GGG | + | chr7.1:3618900-3618919 | MS.gene050936:intron | 40.0% | |
| ATAGGAATTTGGATGCCAAG+AGG | + | chr7.1:3618549-3618568 | MS.gene050936:intron | 40.0% | |
| ATGGCATCTGTCCTATTTGA+TGG | + | chr7.1:3619037-3619056 | MS.gene050936:intron | 40.0% | |
| CAAGAGGACATGATATTCTG+CGG | + | chr7.1:3618565-3618584 | MS.gene050936:CDS | 40.0% | |
| CAATTGCATAGCAAAGACCT+TGG | - | chr7.1:3618652-3618671 | None:intergenic | 40.0% | |
| CGTTGGGTTTGACAAAATCA+CGG | - | chr7.1:3618391-3618410 | None:intergenic | 40.0% | |
| TGATGACATGGAATCCAGAT+CGG | + | chr7.1:3619174-3619193 | MS.gene050936:intron | 40.0% | |
| TGCCAAACCATTGAACATAG+AGG | - | chr7.1:3618013-3618032 | None:intergenic | 40.0% | |
| TTCTCCAAAAGAGGTCAGAA+AGG | + | chr7.1:3618186-3618205 | MS.gene050936:CDS | 40.0% | |
| TTGGTTCAACCAGTTGGATT+AGG | - | chr7.1:3620145-3620164 | None:intergenic | 40.0% | |
| ! | AAGAGCTTGTTTCGAATTGC+GGG | + | chr7.1:3618293-3618312 | MS.gene050936:intron | 40.0% |
| ! | CAAGGTCTTTGCTATGCAAT+TGG | + | chr7.1:3618650-3618669 | MS.gene050936:CDS | 40.0% |
| ! | GACTTGATTTTGTGTAGCTC+TGG | + | chr7.1:3618123-3618142 | MS.gene050936:CDS | 40.0% |
| ! | TGCGGTATATTTGATGGACA+CGG | + | chr7.1:3618583-3618602 | MS.gene050936:CDS | 40.0% |
| !! | ACCTCTTTTGGAGAAAACTG+AGG | - | chr7.1:3618181-3618200 | None:intergenic | 40.0% |
| !! | ATCAGACGATGATGGAAGTT+TGG | + | chr7.1:3619385-3619404 | MS.gene050936:CDS | 40.0% |
| !!! | TGTGGTTTGTTTTGTGATGC+AGG | + | chr7.1:3620224-3620243 | MS.gene050936:intron | 40.0% |
| AATTGGGCTATCTTGCTCAG+GGG | - | chr7.1:3620424-3620443 | None:intergenic | 45.0% | |
| ATCAAGACTGTTGCATGGTG+TGG | + | chr7.1:3618214-3618233 | MS.gene050936:CDS | 45.0% | |
| ATCTCCAAAAGCCCTTGACA+TGG | - | chr7.1:3619642-3619661 | None:intergenic | 45.0% | |
| ATGCATGGAAACGCAAGAGA+AGG | + | chr7.1:3620343-3620362 | MS.gene050936:CDS | 45.0% | |
| CAAGATACTTACCCCATCAG+TGG | - | chr7.1:3619750-3619769 | None:intergenic | 45.0% | |
| CAATTGGGCTATCTTGCTCA+GGG | - | chr7.1:3620425-3620444 | None:intergenic | 45.0% | |
| CACCATGCAACAGTCTTGAT+TGG | - | chr7.1:3618214-3618233 | None:intergenic | 45.0% | |
| CAGTACCTGAAGTAACTCAG+AGG | + | chr7.1:3619690-3619709 | MS.gene050936:CDS | 45.0% | |
| CGCAGAATATCATGTCCTCT+TGG | - | chr7.1:3618567-3618586 | None:intergenic | 45.0% | |
| CTATCTTGCTCAGGGGAAAT+GGG | - | chr7.1:3620417-3620436 | None:intergenic | 45.0% | |
| GAGAGAAGCTGTTGAAGCAA+TGG | + | chr7.1:3618080-3618099 | MS.gene050936:CDS | 45.0% | |
| GAGTAAGAGAGTCAATGCCA+AGG | + | chr7.1:3618632-3618651 | MS.gene050936:CDS | 45.0% | |
| GCTACAACATCAGACGATGA+TGG | + | chr7.1:3619377-3619396 | MS.gene050936:CDS | 45.0% | |
| TCAAGACTGTTGCATGGTGT+GGG | + | chr7.1:3618215-3618234 | MS.gene050936:CDS | 45.0% | |
| TCAATTGGGCTATCTTGCTC+AGG | - | chr7.1:3620426-3620445 | None:intergenic | 45.0% | |
| TGCATGGAAACGCAAGAGAA+GGG | + | chr7.1:3620344-3620363 | MS.gene050936:CDS | 45.0% | |
| TGCCCTCTCAATTGTTAGAC+AGG | + | chr7.1:3618864-3618883 | MS.gene050936:CDS | 45.0% | |
| TGGAATGTGCAGTACATGCA+TGG | + | chr7.1:3620328-3620347 | MS.gene050936:CDS | 45.0% | |
| TTACCAGATGTAGAGTCTCC+AGG | + | chr7.1:3619611-3619630 | MS.gene050936:CDS | 45.0% | |
| TTGTTGTGCTTGCCACTGAT+GGG | + | chr7.1:3619735-3619754 | MS.gene050936:CDS | 45.0% | |
| ! | AGAGCTTGTTTCGAATTGCG+GGG | + | chr7.1:3618294-3618313 | MS.gene050936:intron | 45.0% |
| ! | ATGATGAACCAGGAGTGCAT+AGG | + | chr7.1:3619582-3619601 | MS.gene050936:CDS | 45.0% |
| ! | GCCTCAGTTTTCTCCAAAAG+AGG | + | chr7.1:3618177-3618196 | MS.gene050936:CDS | 45.0% |
| ! | GCGGTATATTTGATGGACAC+GGG | + | chr7.1:3618584-3618603 | MS.gene050936:CDS | 45.0% |
| ! | GGTTCCTTTCTGACCTCTTT+TGG | - | chr7.1:3618193-3618212 | None:intergenic | 45.0% |
| ! | TAATGGTTTGCAGGGGGAAA+CGG | + | chr7.1:3619316-3619335 | MS.gene050936:intron | 45.0% |
| ! | TGACTGGTTCCTAATCCAAC+TGG | + | chr7.1:3620133-3620152 | MS.gene050936:intron | 45.0% |
| ! | TGATGAACCAGGAGTGCATA+GGG | + | chr7.1:3619583-3619602 | MS.gene050936:CDS | 45.0% |
| ! | TTTGTTGTGCTTGCCACTGA+TGG | + | chr7.1:3619734-3619753 | MS.gene050936:CDS | 45.0% |
| !! | CGGGGGTTTTGACAAAATCA+AGG | + | chr7.1:3618312-3618331 | MS.gene050936:intron | 45.0% |
| !! | TCATTTATAATTATATAAAT+TGG | + | chr7.1:3619479-3619498 | MS.gene050936:intron | 5.0% |
| !!! | TTAGTTAATTTATTTTATAA+TGG | + | chr7.1:3619299-3619318 | MS.gene050936:intron | 5.0% |
| AGTCCTGGAGACTCTACATC+TGG | - | chr7.1:3619617-3619636 | None:intergenic | 50.0% | |
| CAGTGGCAAGCACAACAAAC+TGG | - | chr7.1:3619733-3619752 | None:intergenic | 50.0% | |
| GCATGGAAACGCAAGAGAAG+GGG | + | chr7.1:3620345-3620364 | MS.gene050936:CDS | 50.0% | |
| GCTATCTTGCTCAGGGGAAA+TGG | - | chr7.1:3620418-3620437 | None:intergenic | 50.0% | |
| TCCAGGACTTGCCATGTCAA+GGG | + | chr7.1:3619628-3619647 | MS.gene050936:CDS | 50.0% | |
| TGTTGTGCTTGCCACTGATG+GGG | + | chr7.1:3619736-3619755 | MS.gene050936:CDS | 50.0% | |
| TTGGCTACAAAGTGACCCCA+TGG | - | chr7.1:3618610-3618629 | None:intergenic | 50.0% | |
| ! | ATTTGATGGACACGGGCCAT+GGG | + | chr7.1:3618591-3618610 | MS.gene050936:CDS | 50.0% |
| ! | CTTGCCATGTCAAGGGCTTT+TGG | + | chr7.1:3619635-3619654 | MS.gene050936:CDS | 50.0% |
| ! | GAGCTTGTTTCGAATTGCGG+GGG | + | chr7.1:3618295-3618314 | MS.gene050936:intron | 50.0% |
| ! | TATTTGATGGACACGGGCCA+TGG | + | chr7.1:3618590-3618609 | MS.gene050936:CDS | 50.0% |
| AACCAGACCCTATGCACTCC+TGG | - | chr7.1:3619593-3619612 | None:intergenic | 55.0% | |
| AGACTGTTGCATGGTGTGGG+AGG | + | chr7.1:3618218-3618237 | MS.gene050936:CDS | 55.0% | |
| CTCCAGGACTTGCCATGTCA+AGG | + | chr7.1:3619627-3619646 | MS.gene050936:CDS | 55.0% | |
| CTTGCTCAGGGGAAATGGGA+GGG | - | chr7.1:3620413-3620432 | None:intergenic | 55.0% | |
| TCTTGCTCAGGGGAAATGGG+AGG | - | chr7.1:3620414-3620433 | None:intergenic | 55.0% | |
| TGGTGACTCTCGTGCAGTAC+TGG | + | chr7.1:3619355-3619374 | MS.gene050936:CDS | 55.0% | |
| ! | AACCAGGAGTGCATAGGGTC+TGG | + | chr7.1:3619588-3619607 | MS.gene050936:CDS | 55.0% |
| ! | TTTGATGGACACGGGCCATG+GGG | + | chr7.1:3618592-3618611 | MS.gene050936:CDS | 55.0% |
| GCCCTTGACATGGCAAGTCC+TGG | - | chr7.1:3619632-3619651 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3617997 | 3620458 | 3617997 | ID=MS.gene050936 |
| chr7.1 | mRNA | 3617997 | 3620458 | 3617997 | ID=MS.gene050936.t1;Parent=MS.gene050936 |
| chr7.1 | exon | 3617997 | 3618239 | 3617997 | ID=MS.gene050936.t1.exon1;Parent=MS.gene050936.t1 |
| chr7.1 | CDS | 3617997 | 3618239 | 3617997 | ID=cds.MS.gene050936.t1;Parent=MS.gene050936.t1 |
| chr7.1 | exon | 3618553 | 3618885 | 3618553 | ID=MS.gene050936.t1.exon2;Parent=MS.gene050936.t1 |
| chr7.1 | CDS | 3618553 | 3618885 | 3618553 | ID=cds.MS.gene050936.t1;Parent=MS.gene050936.t1 |
| chr7.1 | exon | 3619329 | 3619449 | 3619329 | ID=MS.gene050936.t1.exon3;Parent=MS.gene050936.t1 |
| chr7.1 | CDS | 3619329 | 3619449 | 3619329 | ID=cds.MS.gene050936.t1;Parent=MS.gene050936.t1 |
| chr7.1 | exon | 3619534 | 3619757 | 3619534 | ID=MS.gene050936.t1.exon4;Parent=MS.gene050936.t1 |
| chr7.1 | CDS | 3619534 | 3619757 | 3619534 | ID=cds.MS.gene050936.t1;Parent=MS.gene050936.t1 |
| chr7.1 | exon | 3620246 | 3620458 | 3620246 | ID=MS.gene050936.t1.exon5;Parent=MS.gene050936.t1 |
| chr7.1 | CDS | 3620246 | 3620458 | 3620246 | ID=cds.MS.gene050936.t1;Parent=MS.gene050936.t1 |
| Gene Sequence |
| Protein sequence |
