AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene044022

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044022.t1 MTR_1g019760 99.068 429 3 1 1 429 1 428 0.0 869
MS.gene044022.t1 MTR_3g101540 83.721 430 67 2 1 428 1 429 0.0 743
MS.gene044022.t1 MTR_3g101540 84.286 420 63 2 1 418 1 419 0.0 733
MS.gene044022.t1 MTR_1g019760 98.592 355 4 1 1 355 1 354 0.0 716
MS.gene044022.t1 MTR_7g112430 58.824 408 167 1 11 418 14 420 7.00e-173 491
MS.gene044022.t1 MTR_1g083750 56.585 410 177 1 11 419 14 423 2.56e-164 469
MS.gene044022.t1 MTR_1g110210 64.968 314 108 1 4 315 7 320 8.58e-154 438
MS.gene044022.t1 MTR_1g083750 57.100 331 141 1 90 419 1 331 1.25e-127 372
MS.gene044022.t1 MTR_7g029240 50.591 423 183 12 11 420 14 423 1.81e-123 365
MS.gene044022.t1 MTR_1g014640 32.917 240 137 9 65 299 108 328 1.04e-25 107
MS.gene044022.t1 MTR_1g013400 32.917 240 137 9 65 299 108 328 1.04e-25 107
MS.gene044022.t1 MTR_3g105730 31.381 239 140 8 65 298 43 262 5.13e-24 101
MS.gene044022.t1 MTR_3g105730 30.962 239 141 8 65 298 65 284 8.68e-24 100
MS.gene044022.t1 MTR_1g115570 34.615 234 131 10 66 297 127 340 2.18e-23 100
MS.gene044022.t1 MTR_2g078760 30.638 235 139 9 65 294 38 253 1.33e-22 96.7
MS.gene044022.t1 MTR_2g078760 30.638 235 139 9 65 294 117 332 2.73e-22 97.4
MS.gene044022.t1 MTR_3g464650 27.426 237 151 8 64 294 93 314 2.40e-21 94.4
MS.gene044022.t1 MTR_3g464700 30.457 197 120 7 64 259 117 297 1.87e-20 92.0
MS.gene044022.t1 MTR_3g091060 31.837 245 144 7 65 305 125 350 2.11e-20 92.4
MS.gene044022.t1 MTR_8g463130 32.766 235 130 12 65 292 66 279 2.48e-20 90.9
MS.gene044022.t1 MTR_8g463130 32.766 235 130 12 65 292 38 251 3.30e-20 90.1
MS.gene044022.t1 MTR_2g008850 29.185 233 141 9 65 292 19 232 1.08e-19 88.2
MS.gene044022.t1 MTR_4g116420 30.534 262 135 10 64 304 123 358 3.05e-19 89.4
MS.gene044022.t1 MTR_5g071550 28.279 244 150 10 59 294 148 374 3.98e-19 89.0
MS.gene044022.t1 MTR_4g125810 28.244 262 143 8 66 294 254 503 8.15e-19 89.0
MS.gene044022.t1 MTR_2g008850 29.185 233 141 9 65 292 65 278 9.92e-19 86.3
MS.gene044022.t1 MTR_1g015110 30.292 274 135 11 66 299 291 548 1.27e-17 85.5
MS.gene044022.t1 MTR_5g024340 26.119 268 158 9 61 311 120 364 2.38e-17 83.6
MS.gene044022.t1 MTR_4g123080 28.996 269 155 10 64 313 94 345 2.81e-17 83.2
MS.gene044022.t1 MTR_1g086350 29.588 267 149 12 64 308 101 350 3.34e-17 83.2
MS.gene044022.t1 MTR_1g050520 29.268 246 141 7 66 296 419 646 3.43e-17 84.3
MS.gene044022.t1 MTR_1g086350 29.588 267 149 12 64 308 117 366 3.66e-17 83.2
MS.gene044022.t1 MTR_3g074610 27.778 234 143 8 65 292 66 279 4.26e-17 81.6
MS.gene044022.t1 MTR_4g094208 28.205 234 142 9 65 292 61 274 4.38e-17 81.6
MS.gene044022.t1 MTR_1g086350 28.261 276 159 12 55 308 6 264 4.76e-17 81.6
MS.gene044022.t1 MTR_4g123080 28.996 269 155 10 64 313 112 363 5.50e-17 82.4
MS.gene044022.t1 MTR_5g071550 30.570 193 117 7 59 250 148 324 8.05e-17 82.0
MS.gene044022.t1 MTR_5g063940 28.326 233 143 8 65 292 19 232 9.65e-17 79.7
MS.gene044022.t1 MTR_4g094542 30.417 240 136 11 61 292 146 362 1.02e-16 81.6
MS.gene044022.t1 MTR_5g063940 28.326 233 143 8 65 292 66 279 1.49e-16 80.1
MS.gene044022.t1 MTR_1g028300 29.555 247 143 8 66 294 146 379 2.31e-16 80.9
MS.gene044022.t1 MTR_3g104710 28.058 278 144 9 62 299 283 544 1.11e-15 79.3
MS.gene044022.t1 MTR_6g081850 27.843 255 138 10 66 292 80 316 1.72e-15 77.4
MS.gene044022.t1 MTR_2g435550 30.325 277 143 16 67 301 94 362 7.53e-14 72.8
MS.gene044022.t1 MTR_2g435550 30.325 277 143 16 67 301 80 348 7.58e-14 72.8
MS.gene044022.t1 MTR_2g040500 27.368 285 144 9 66 299 268 540 1.69e-13 72.8
MS.gene044022.t1 MTR_8g102550 25.483 259 160 9 66 302 153 400 2.06e-13 72.0
MS.gene044022.t1 MTR_2g435550 31.429 245 126 14 67 277 94 330 3.91e-13 70.9
MS.gene044022.t1 MTR_4g007440 34.839 155 72 6 120 263 153 289 4.42e-13 70.5
MS.gene044022.t1 MTR_1g014190 28.125 256 113 11 62 262 49 288 8.67e-13 69.7
MS.gene044022.t1 MTR_4g120410 32.124 193 105 11 127 299 173 359 1.12e-12 69.3
MS.gene044022.t1 MTR_1g014190 28.125 256 113 11 62 262 87 326 1.43e-12 69.3
MS.gene044022.t1 MTR_3g105880 34.437 151 70 6 120 259 153 285 1.83e-12 68.6
MS.gene044022.t1 MTR_3g105880 34.437 151 70 6 120 259 153 285 4.20e-12 67.4
MS.gene044022.t1 MTR_2g033000 27.509 269 159 11 64 313 99 350 7.29e-12 67.0
MS.gene044022.t1 MTR_2g020970 29.242 277 153 13 52 294 74 341 2.05e-11 65.5
MS.gene044022.t1 MTR_7g112490 32.727 165 94 7 128 280 200 359 5.76e-11 64.3
MS.gene044022.t1 MTR_7g112490 32.727 165 94 7 128 280 182 341 7.55e-11 63.9
MS.gene044022.t1 MTR_2g020970 28.674 279 152 13 52 294 74 341 8.45e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044022.t1 AT1G47380 76.690 429 98 2 1 428 1 428 0.0 697
MS.gene044022.t1 AT1G68410 57.245 421 174 2 4 418 9 429 8.49e-180 509
MS.gene044022.t1 AT1G68410 57.245 421 174 2 4 418 9 429 8.49e-180 509
MS.gene044022.t1 AT1G68410 57.245 421 174 2 4 418 9 429 8.49e-180 509
MS.gene044022.t1 AT1G68410 57.245 421 174 2 4 418 9 429 8.49e-180 509
MS.gene044022.t1 AT1G09160 57.971 414 169 3 7 418 10 420 3.39e-169 481
MS.gene044022.t1 AT1G09160 57.971 414 169 3 7 418 10 420 3.39e-169 481
MS.gene044022.t1 AT5G53140 31.923 260 150 8 37 292 109 345 1.78e-25 107
MS.gene044022.t1 AT5G53140 31.923 260 150 8 37 292 109 345 1.78e-25 107
MS.gene044022.t1 AT1G43900 35.043 234 127 10 64 292 153 366 1.10e-24 105
MS.gene044022.t1 AT2G34740 28.782 271 162 11 30 295 91 335 1.36e-23 101
MS.gene044022.t1 AT4G31750 30.544 239 142 9 65 298 64 283 1.13e-22 98.2
MS.gene044022.t1 AT4G31750 30.544 239 142 9 65 298 64 283 1.55e-22 97.8
MS.gene044022.t1 AT4G31750 30.544 239 142 9 65 298 64 283 1.55e-22 97.8
MS.gene044022.t1 AT2G40180 29.218 243 155 6 58 294 154 385 4.23e-22 97.8
MS.gene044022.t1 AT1G78200 30.342 234 140 8 65 292 19 235 5.87e-22 94.7
MS.gene044022.t1 AT1G78200 30.342 234 140 8 65 292 19 235 5.87e-22 94.7
MS.gene044022.t1 AT5G10740 30.508 236 140 8 65 295 64 280 8.53e-22 96.3
MS.gene044022.t1 AT5G10740 30.508 236 140 8 65 295 64 280 8.53e-22 96.3
MS.gene044022.t1 AT1G07160 31.683 202 119 6 64 262 152 337 1.06e-21 96.7
MS.gene044022.t1 AT1G22280 28.755 233 148 7 65 292 65 284 1.18e-21 94.7
MS.gene044022.t1 AT5G24940 30.085 236 141 8 65 295 64 280 1.29e-21 97.1
MS.gene044022.t1 AT1G78200 30.342 234 140 8 65 292 64 280 2.20e-21 94.0
MS.gene044022.t1 AT1G78200 30.342 234 140 8 65 292 64 280 2.20e-21 94.0
MS.gene044022.t1 AT1G78200 30.342 234 140 8 65 292 64 280 2.20e-21 94.0
MS.gene044022.t1 AT1G22280 29.185 233 141 7 65 292 65 278 1.03e-20 92.0
MS.gene044022.t1 AT1G67820 32.273 220 135 5 64 283 150 355 1.61e-20 94.0
MS.gene044022.t1 AT1G67820 32.273 220 135 5 64 283 114 319 1.72e-20 93.2
MS.gene044022.t1 AT5G57050 30.798 263 136 9 66 294 121 371 1.94e-20 92.8
MS.gene044022.t1 AT4G26080 29.588 267 143 8 66 299 173 427 2.62e-20 93.2
MS.gene044022.t1 AT5G57050 30.798 263 136 9 66 294 161 411 3.06e-20 92.8
MS.gene044022.t1 AT2G20630 28.731 268 160 12 30 292 35 276 4.02e-20 90.5
MS.gene044022.t1 AT4G28400 28.235 255 154 10 43 292 28 258 7.30e-20 89.4
MS.gene044022.t1 AT2G25620 30.451 266 136 10 64 305 127 367 1.26e-19 90.5
MS.gene044022.t1 AT2G25620 30.451 266 136 10 64 305 127 367 1.26e-19 90.5
MS.gene044022.t1 AT4G28400 28.235 255 154 10 43 292 50 280 1.29e-19 89.0
MS.gene044022.t1 AT2G20630 28.467 274 165 12 30 298 35 282 1.48e-19 89.0
MS.gene044022.t1 AT3G51470 28.782 271 151 11 59 311 56 302 1.55e-19 89.4
MS.gene044022.t1 AT1G34750 29.185 233 141 7 65 292 66 279 2.14e-19 88.2
MS.gene044022.t1 AT1G34750 29.185 233 141 7 65 292 66 279 2.14e-19 88.2
MS.gene044022.t1 AT1G34750 29.185 233 141 7 65 292 66 279 2.14e-19 88.2
MS.gene044022.t1 AT3G51470 28.782 271 151 11 59 311 100 346 3.02e-19 89.0
MS.gene044022.t1 AT2G30020 30.000 240 143 11 64 294 169 392 1.89e-18 87.0
MS.gene044022.t1 AT2G40860 31.174 247 136 7 65 296 325 552 2.58e-17 84.7
MS.gene044022.t1 AT2G40860 31.174 247 136 7 65 296 423 650 2.61e-17 84.7
MS.gene044022.t1 AT2G33700 29.730 259 136 11 64 304 122 352 5.98e-17 82.4
MS.gene044022.t1 AT1G48040 30.072 276 155 10 59 312 106 365 2.60e-16 80.5
MS.gene044022.t1 AT3G62260 29.044 272 145 12 64 309 26 275 6.91e-16 78.2
MS.gene044022.t1 AT4G27800 25.338 296 170 8 58 312 81 366 2.32e-15 77.8
MS.gene044022.t1 AT2G40860 30.435 230 118 6 65 270 423 634 2.90e-15 78.6
MS.gene044022.t1 AT3G62260 29.044 272 145 12 64 309 115 364 3.07e-15 77.4
MS.gene044022.t1 AT3G62260 29.044 272 145 12 64 309 116 365 3.11e-15 77.4
MS.gene044022.t1 AT5G27930 34.356 163 93 6 128 280 176 334 7.04e-14 73.2
MS.gene044022.t1 AT5G27930 34.356 163 93 6 128 280 176 334 7.04e-14 73.2
MS.gene044022.t1 AT4G27800 25.856 263 148 7 58 283 81 333 1.30e-13 72.0
MS.gene044022.t1 AT3G11410 29.060 234 121 9 62 266 134 351 2.43e-13 71.6
MS.gene044022.t1 AT3G15260 27.039 233 146 7 65 292 73 286 3.31e-13 70.1
MS.gene044022.t1 AT3G15260 27.039 233 146 7 65 292 73 286 3.31e-13 70.1
MS.gene044022.t1 AT4G27800 26.446 242 131 7 58 262 81 312 3.98e-13 70.5
MS.gene044022.t1 AT1G17550 25.952 289 147 10 62 299 234 506 1.39e-12 69.7
MS.gene044022.t1 AT1G17550 25.952 289 147 10 62 299 234 506 1.39e-12 69.7
MS.gene044022.t1 AT4G28400 26.754 228 136 9 30 249 33 237 1.19e-11 65.1
MS.gene044022.t1 AT4G32950 28.276 290 174 12 36 305 49 324 1.31e-11 65.9
MS.gene044022.t1 AT1G18030 29.952 207 106 8 66 250 110 299 3.40e-11 64.3
MS.gene044022.t1 AT5G26010 29.545 220 127 11 57 255 65 277 5.87e-11 63.9
MS.gene044022.t1 AT2G40860 31.088 193 102 5 65 244 423 597 7.49e-11 64.7

Find 110 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTATACATATTCTGTTTA+TGG 0.146524 1.2:+3895709 MS.gene044022:CDS
CCATGGCTTCTTTCTTCTCC+TGG 0.273356 1.2:-3900921 None:intergenic
TGCTGCTGCTATTTATTCTA+AGG 0.285233 1.2:+3896322 MS.gene044022:CDS
TTGCCTAGAGCTTTGGTTGC+TGG 0.297177 1.2:+3896413 MS.gene044022:CDS
CATCAAAAGAAGCCAGTAAA+AGG 0.301310 1.2:+3900532 MS.gene044022:CDS
TCTATACATATTCTGTTTAT+GGG 0.326441 1.2:+3895710 MS.gene044022:CDS
GTCACCTTTGTGATTATAGA+AGG 0.340000 1.2:+3898728 MS.gene044022:CDS
CCATCAAACGGTACCTCTTT+CGG 0.347524 1.2:+3895552 MS.gene044022:CDS
TTGTGTCTTTCACGGTCTAT+TGG 0.351135 1.2:+3899674 MS.gene044022:CDS
TTATCTGCAGTGATGGTGTT+TGG 0.351355 1.2:+3900133 MS.gene044022:CDS
TCTATTGGAGATATGGATAT+TGG 0.357187 1.2:+3899689 MS.gene044022:CDS
TTCACGGTCTATTGGAGATA+TGG 0.367775 1.2:+3899682 MS.gene044022:CDS
GAGAAACCTGAGATTGTTCA+TGG 0.372409 1.2:+3895610 MS.gene044022:CDS
ATTACTTGTCAGCAGATCAT+AGG 0.376944 1.2:+3898819 MS.gene044022:CDS
AGCAGCGTTGCCTAGAGCTT+TGG 0.392801 1.2:+3896406 MS.gene044022:CDS
TATCTGCAGTGATGGTGTTT+GGG 0.412920 1.2:+3900134 MS.gene044022:CDS
CCGGTGGCTTGTGTCTTTCA+CGG 0.416465 1.2:+3899666 MS.gene044022:CDS
GTCAGAGGATGGTTGGTGAT+GGG 0.426132 1.2:+3895686 MS.gene044022:CDS
TTTCCTTTGCTTTAGTTGCC+AGG 0.429172 1.2:+3900903 MS.gene044022:CDS
ATGGAAGGGAAAAGATCATT+AGG 0.430336 1.2:+3900940 MS.gene044022:CDS
TGTCAGAGGATGGTTGGTGA+TGG 0.440068 1.2:+3895685 MS.gene044022:CDS
GAGGTTGGTCGTTTAAATAC+AGG 0.444696 1.2:+3898979 MS.gene044022:CDS
TACAGCTCCACTACCACATC+TGG 0.463156 1.2:-3900625 None:intergenic
AGGTTGGTCCTTTGAGATGT+TGG 0.465990 1.2:+3899642 MS.gene044022:intron
GCTTGACCATGAACAATCTC+AGG 0.467857 1.2:-3895616 None:intergenic
CCGAAAGAGGTACCGTTTGA+TGG 0.469554 1.2:-3895552 None:intergenic
CTCTTTCGGTTCTATTGAAG+CGG 0.469837 1.2:+3895566 MS.gene044022:CDS
CCTTTGTGATTATAGAAGGA+TGG 0.472037 1.2:+3898732 MS.gene044022:CDS
ATGTACTGAAATACCCTCTC+CGG 0.472811 1.2:-3900836 None:intergenic
CAATCAAGGGCCACTTCTGC+AGG 0.480526 1.2:-3900165 None:intergenic
TGTTGTCGATATATTACCTC+AGG 0.492152 1.2:+3900486 MS.gene044022:CDS
TAATATATCGACAACAATAC+AGG 0.495282 1.2:-3900479 None:intergenic
CACTCATCTCTGTTAAGATC+CGG 0.495300 1.2:-3896380 None:intergenic
CAGGAAGCTTTACAAGCAAA+GGG 0.497674 1.2:+3900439 MS.gene044022:intron
CGCTTCAATAGAACCGAAAG+AGG 0.504484 1.2:-3895565 None:intergenic
CTTTGTGATTATAGAAGGAT+GGG 0.507466 1.2:+3898733 MS.gene044022:CDS
GGATGCTTTACCTGCAGAAG+TGG 0.508685 1.2:+3900155 MS.gene044022:CDS
ACATGCCACGACAACAATCA+AGG 0.512860 1.2:-3900179 None:intergenic
ACTTCTAGCGGCGGTGAGGT+TGG 0.512986 1.2:+3898964 MS.gene044022:CDS
TCAGGAAGCTTTACAAGCAA+AGG 0.513371 1.2:+3900438 MS.gene044022:intron
TCAGAGGATGGTTGGTGATG+GGG 0.521504 1.2:+3895687 MS.gene044022:CDS
GCAAAGGAAAGGTCCATCCC+AGG 0.526286 1.2:-3900890 None:intergenic
GAGATTGTTCATGGTCAAGC+TGG 0.527083 1.2:+3895619 MS.gene044022:CDS
CAAGCTGGACAAAGTAAGAA+AGG 0.531054 1.2:+3895634 MS.gene044022:CDS
AGCTGTCTACCGCTGGAGGC+CGG 0.534654 1.2:+3900106 MS.gene044022:intron
TTAATTCAGCTGTCTACCGC+TGG 0.534792 1.2:+3900099 MS.gene044022:intron
CATGGAGCCAGATGTGGTAG+TGG 0.541537 1.2:+3900618 MS.gene044022:CDS
AACTTGAACATGTTGCATAG+TGG 0.546946 1.2:-3900778 None:intergenic
TGATGTGGTACAGGAGCAGG+TGG 0.551757 1.2:-3900514 None:intergenic
TGTTGTCAGTGCAATTCCTC+CGG 0.551960 1.2:+3896361 MS.gene044022:CDS
CCAGGAGAAGAAAGAAGCCA+TGG 0.556410 1.2:+3900921 MS.gene044022:CDS
AGAAGATTCTAGTACGCAGC+GGG 0.558740 1.2:-3898783 None:intergenic
AATCCAGCAACCAAAGCTCT+AGG 0.565798 1.2:-3896416 None:intergenic
CGGCTTGTTATCTGCAGTGA+TGG 0.569169 1.2:+3900126 MS.gene044022:CDS
TGTACTGAAATACCCTCTCC+GGG 0.570714 1.2:-3900835 None:intergenic
TACTAGAATCTTCTGAAGGA+GGG 0.573395 1.2:+3898792 MS.gene044022:CDS
TCTTTCGGTTCTATTGAAGC+GGG 0.574423 1.2:+3895567 MS.gene044022:CDS
GGTCCTTTGAGATGTTGGCC+CGG 0.574568 1.2:+3899647 MS.gene044022:CDS
CGTGAAAGACACAAGCCACC+GGG 0.575222 1.2:-3899665 None:intergenic
TTATATTGACAAAGAATACA+TGG 0.576737 1.2:+3900600 MS.gene044022:CDS
CCGTGAAAGACACAAGCCAC+CGG 0.577523 1.2:-3899666 None:intergenic
CAAAGGAAAGGTCCATCCCA+GGG 0.579850 1.2:-3900889 None:intergenic
ATTCAGCTGTCTACCGCTGG+AGG 0.580639 1.2:+3900102 MS.gene044022:intron
CTATACATATTCTGTTTATG+GGG 0.580689 1.2:+3895711 MS.gene044022:CDS
ACCATATGTAAAACAAGTGA+AGG 0.581674 1.2:+3899730 MS.gene044022:CDS
GTTGTAACAGTTGCATCAGT+CGG 0.584864 1.2:+3898755 MS.gene044022:CDS
AGAAGAAAGAAGCCATGGAA+GGG 0.588485 1.2:+3900926 MS.gene044022:CDS
AGAGGGTATTTCAGTACATG+AGG 0.592511 1.2:+3900840 MS.gene044022:CDS
GAGAAGAAAGAAGCCATGGA+AGG 0.596474 1.2:+3900925 MS.gene044022:CDS
GAGGAGTGAACACCATCAAA+CGG 0.602609 1.2:+3895540 MS.gene044022:CDS
TGTTAAAGTCTGATTGTCAG+AGG 0.605972 1.2:+3895671 MS.gene044022:CDS
GCCAGTAAAAGGAATGCTCA+AGG 0.606078 1.2:+3900543 MS.gene044022:CDS
GTGGCCCTTGATTGTTGTCG+TGG 0.610123 1.2:+3900174 MS.gene044022:CDS
GTAGTGGAGCTGTACGAGGA+AGG 0.610281 1.2:+3900634 MS.gene044022:CDS
CAGCTATTTGATGGACACAA+TGG 0.613548 1.2:+3896296 MS.gene044022:intron
CAGAAGATTCTAGTACGCAG+CGG 0.615294 1.2:-3898784 None:intergenic
TCTCCTGGCAACTAAAGCAA+AGG 0.615423 1.2:-3900906 None:intergenic
GTAGAAATAAAACCCGGAGA+GGG 0.616226 1.2:+3900823 MS.gene044022:CDS
TATCACTTCTAGCGGCGGTG+AGG 0.618968 1.2:+3898960 MS.gene044022:CDS
AAAGTCTGATTGTCAGAGGA+TGG 0.619234 1.2:+3895675 MS.gene044022:CDS
TCTGATTGTCAGAGGATGGT+TGG 0.621776 1.2:+3895679 MS.gene044022:CDS
AGGTTGGTCGTTTAAATACA+GGG 0.623903 1.2:+3898980 MS.gene044022:CDS
GTACTAGAATCTTCTGAAGG+AGG 0.627636 1.2:+3898791 MS.gene044022:CDS
TGGCAACTAAAGCAAAGGAA+AGG 0.629817 1.2:-3900901 None:intergenic
TGCGTACTAGAATCTTCTGA+AGG 0.633378 1.2:+3898788 MS.gene044022:CDS
CATGCCACGACAACAATCAA+GGG 0.635389 1.2:-3900178 None:intergenic
TCATCTCTGTTAAGATCCGG+AGG 0.637370 1.2:-3896377 None:intergenic
GATAACAAGCCGGCCTCCAG+CGG 0.637637 1.2:-3900115 None:intergenic
CCACCGGGCCAACATCTCAA+AGG 0.638238 1.2:-3899650 None:intergenic
TGTCAAGTAGAAATAAAACC+CGG 0.639616 1.2:+3900817 MS.gene044022:CDS
AGAATACATGGAGCCAGATG+TGG 0.640882 1.2:+3900612 MS.gene044022:CDS
TGGACAAAGTAAGAAAGGAG+AGG 0.644392 1.2:+3895639 MS.gene044022:CDS
CCTTTGAGATGTTGGCCCGG+TGG 0.645181 1.2:+3899650 MS.gene044022:CDS
GGAGCAGGTGGCTTCTCCTG+AGG 0.645509 1.2:-3900502 None:intergenic
AGTAGAAATAAAACCCGGAG+AGG 0.647411 1.2:+3900822 MS.gene044022:CDS
CCATCCTTCTATAATCACAA+AGG 0.652760 1.2:-3898732 None:intergenic
TTGTCGTGGCATGTCAGCAG+AGG 0.661195 1.2:+3900188 MS.gene044022:CDS
CTGACAATCAGACTTTAACA+AGG 0.663137 1.2:-3895668 None:intergenic
CATCACTGCAGATAACAAGC+CGG 0.667335 1.2:-3900125 None:intergenic
AGGGTTCGTATCACTTCTAG+CGG 0.670269 1.2:+3898952 MS.gene044022:CDS
GAGGGTATTTCAGTACATGA+GGG 0.676102 1.2:+3900841 MS.gene044022:CDS
GTTGGTCGTTTAAATACAGG+GGG 0.676730 1.2:+3898982 MS.gene044022:CDS
GTTCGTATCACTTCTAGCGG+CGG 0.677465 1.2:+3898955 MS.gene044022:CDS
TGTGGTAGTGGAGCTGTACG+AGG 0.678893 1.2:+3900630 MS.gene044022:CDS
GGTTGGTCGTTTAAATACAG+GGG 0.683229 1.2:+3898981 MS.gene044022:CDS
CGGATCTTAACAGAGATGAG+TGG 0.685922 1.2:+3896381 MS.gene044022:CDS
AAAGGAAAGGTCCATCCCAG+GGG 0.692540 1.2:-3900888 None:intergenic
GGGAAAGAACAATGTCTGTG+AGG 0.706298 1.2:+3895521 None:intergenic
ATTTCAGATAGACTTAGCAG+CGG 0.708774 1.2:+3901046 MS.gene044022:intron
GCTCTGCTATGCTTTCAGAG+AGG 0.715140 1.2:+3900656 MS.gene044022:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTATATTCTTAATTTTATA+TGG - chr1.2:3899265-3899284 None:intergenic 10.0%
!!! CATTTTATAATTTTTTTTTG+TGG + chr1.2:3900260-3900279 MS.gene044022:intron 10.0%
!! GTTAATATTACTAATATAAC+TGG + chr1.2:3899596-3899615 MS.gene044022:intron 15.0%
!! TAAATAATAGAGAGAAAAAA+GGG + chr1.2:3896648-3896667 MS.gene044022:intron 15.0%
!! TATATATAACCATATTTGTT+AGG + chr1.2:3896884-3896903 MS.gene044022:intron 15.0%
!! TTAAATAATAGAGAGAAAAA+AGG + chr1.2:3896647-3896666 MS.gene044022:intron 15.0%
!! TTAATGTGATCTTAATAATT+TGG - chr1.2:3898588-3898607 None:intergenic 15.0%
!!! ATTATTACCATTCTATTTTA+TGG + chr1.2:3895959-3895978 MS.gene044022:intron 15.0%
!!! ATTTTTTAAAAATAATTCCC+AGG - chr1.2:3897612-3897631 None:intergenic 15.0%
!!! TTAATATTTGTTTTTTCGAT+TGG - chr1.2:3897911-3897930 None:intergenic 15.0%
!!! TTGTGTTTTTAAATAGAATA+AGG + chr1.2:3898350-3898369 MS.gene044022:intron 15.0%
!!! TTTTTGATTTTTAATGGTTA+TGG + chr1.2:3896805-3896824 MS.gene044022:intron 15.0%
!! AAATACAAAAGATTATACCA+AGG - chr1.2:3896712-3896731 None:intergenic 20.0%
!! AATAAAACTCTCAAATATAC+TGG - chr1.2:3897770-3897789 None:intergenic 20.0%
!! ACAAAATCAGTAATTGAATA+TGG - chr1.2:3895749-3895768 None:intergenic 20.0%
!! ATAAACAAAACCATAACAAT+TGG - chr1.2:3896148-3896167 None:intergenic 20.0%
!! ATAGTGTAAAAAATATTGCT+GGG + chr1.2:3898133-3898152 MS.gene044022:intron 20.0%
!! ATATCTTATGATGTTGAAAT+CGG - chr1.2:3900318-3900337 None:intergenic 20.0%
!! ATCAAAAATATAATAGCAAG+AGG - chr1.2:3896793-3896812 None:intergenic 20.0%
!! ATTGTAAATGATAATAGATG+AGG + chr1.2:3896832-3896851 MS.gene044022:intron 20.0%
!! CAAAAACATATGAGTTAAAA+AGG - chr1.2:3899040-3899059 None:intergenic 20.0%
!! GAATGTTCAAAAAATATGTT+TGG + chr1.2:3897571-3897590 MS.gene044022:intron 20.0%
!! GATATTCATAAATATTGAGA+TGG + chr1.2:3895844-3895863 MS.gene044022:intron 20.0%
!! TAAACAAAACCATAACAATT+GGG - chr1.2:3896147-3896166 None:intergenic 20.0%
!! TATAGTGTAAAAAATATTGC+TGG + chr1.2:3898132-3898151 MS.gene044022:intron 20.0%
!! TCAATATTTATGAATATCTC+AGG - chr1.2:3895842-3895861 None:intergenic 20.0%
!! TCTATACATATTCTGTTTAT+GGG + chr1.2:3895710-3895729 MS.gene044022:CDS 20.0%
!! TTATATTGACAAAGAATACA+TGG + chr1.2:3900600-3900619 MS.gene044022:CDS 20.0%
!! TTGTAAATGATAATAGATGA+GGG + chr1.2:3896833-3896852 MS.gene044022:intron 20.0%
!!! ACCAAAAATTAAAGTATTAC+TGG - chr1.2:3899141-3899160 None:intergenic 20.0%
!!! ATTATTGTTTAAAATGCTTG+TGG + chr1.2:3895894-3895913 MS.gene044022:intron 20.0%
!!! TCCAGTAATACTTTAATTTT+TGG + chr1.2:3899137-3899156 MS.gene044022:intron 20.0%
!!! TTTCTATATTTTGTCATTAC+AGG + chr1.2:3898686-3898705 MS.gene044022:intron 20.0%
! AAACAAAACCATAACAATTG+GGG - chr1.2:3896146-3896165 None:intergenic 25.0%
! AAACAAATGTTAGTATTGTG+TGG - chr1.2:3897237-3897256 None:intergenic 25.0%
! AAATCTTAAAAATTCCTGTC+AGG + chr1.2:3897077-3897096 MS.gene044022:intron 25.0%
! AAATTGCTATATAAAGGTAG+TGG + chr1.2:3897996-3898015 MS.gene044022:intron 25.0%
! AACAAATGTTAGTATTGTGT+GGG - chr1.2:3897236-3897255 None:intergenic 25.0%
! AATAAGGATATCTCATGTAA+AGG + chr1.2:3898366-3898385 MS.gene044022:intron 25.0%
! ATATATAACCAAAGAAAACG+TGG + chr1.2:3898019-3898038 MS.gene044022:intron 25.0%
! ATCAAATGATTGAATTCTTG+AGG + chr1.2:3900001-3900020 MS.gene044022:intron 25.0%
! CTAACATTTGTTTACTCATA+TGG + chr1.2:3897244-3897263 MS.gene044022:intron 25.0%
! CTATACATATTCTGTTTATG+GGG + chr1.2:3895711-3895730 MS.gene044022:CDS 25.0%
! GAATTATTTATTCCCATGTT+TGG - chr1.2:3898198-3898217 None:intergenic 25.0%
! GATTGTAAAAGTGAGATAAA+TGG + chr1.2:3900224-3900243 MS.gene044022:intron 25.0%
! GTCTATACATATTCTGTTTA+TGG + chr1.2:3895709-3895728 MS.gene044022:CDS 25.0%
! TAAATCATGTGCTAACTATA+CGG - chr1.2:3897271-3897290 None:intergenic 25.0%
! TAATATATCGACAACAATAC+AGG - chr1.2:3900482-3900501 None:intergenic 25.0%
! TATATAACCAAAGAAAACGT+GGG + chr1.2:3898020-3898039 MS.gene044022:intron 25.0%
! TATTGTCAAGAGAAAAACTA+GGG - chr1.2:3900721-3900740 None:intergenic 25.0%
! TCAAATGATTGAATTCTTGA+GGG + chr1.2:3900002-3900021 MS.gene044022:intron 25.0%
! TGGAATTGTTTCGTTATTAA+TGG + chr1.2:3898903-3898922 MS.gene044022:intron 25.0%
! TTCTCTTGGTAAAATACATA+GGG - chr1.2:3899370-3899389 None:intergenic 25.0%
! TTTCTCTTGGTAAAATACAT+AGG - chr1.2:3899371-3899390 None:intergenic 25.0%
! TTTGGAAAATTTATCTGAAC+TGG + chr1.2:3895934-3895953 MS.gene044022:intron 25.0%
!! AAACATTTTACAACCTTTCT+TGG + chr1.2:3899303-3899322 MS.gene044022:intron 25.0%
!! AAATCTTCTAAAGAGAGTAT+TGG - chr1.2:3899566-3899585 None:intergenic 25.0%
!! ACTAGATTAAGAATTTTTGC+AGG + chr1.2:3899622-3899641 MS.gene044022:intron 25.0%
!! ATAACCATATTTGTTAGGAT+TGG + chr1.2:3896889-3896908 MS.gene044022:intron 25.0%
!! GTTTAGAATCTTTAGATGAT+AGG + chr1.2:3899334-3899353 MS.gene044022:intron 25.0%
!! TAACCATATTTGTTAGGATT+GGG + chr1.2:3896890-3896909 MS.gene044022:intron 25.0%
!! TTTTACCAAATATGATACGA+GGG - chr1.2:3897654-3897673 None:intergenic 25.0%
!! TTTTACTTACAGCTATTTGA+TGG + chr1.2:3896287-3896306 MS.gene044022:intron 25.0%
!!! ATTACTGATTTTGTTATTGC+AGG + chr1.2:3895755-3895774 MS.gene044022:intron 25.0%
!!! CATATTTTTTGAACATTCCT+TGG - chr1.2:3897569-3897588 None:intergenic 25.0%
!!! TTTTATTTTCATCTATCACC+CGG + chr1.2:3896600-3896619 MS.gene044022:intron 25.0%
AAATACCCTCGTATCATATT+TGG + chr1.2:3897646-3897665 MS.gene044022:intron 30.0%
AAATGAAAAGACCAAGATAG+TGG - chr1.2:3901030-3901049 None:intergenic 30.0%
AAATGCACACAAAGATTTCT+TGG - chr1.2:3900050-3900069 None:intergenic 30.0%
AAGATCACATTAACTAGTGA+TGG + chr1.2:3898595-3898614 MS.gene044022:intron 30.0%
ACATATACTTGTCTAATAGG+CGG - chr1.2:3898284-3898303 None:intergenic 30.0%
ACCATATGTAAAACAAGTGA+AGG + chr1.2:3899730-3899749 MS.gene044022:CDS 30.0%
AGAATATTATTGAATGCCTG+CGG - chr1.2:3898530-3898549 None:intergenic 30.0%
AGTCAAGCCATAAAATAGAA+TGG - chr1.2:3895969-3895988 None:intergenic 30.0%
ATGCACACAAAAATATTCCA+AGG - chr1.2:3898170-3898189 None:intergenic 30.0%
ATTTGGCAAGTAACTAGATA+TGG - chr1.2:3898571-3898590 None:intergenic 30.0%
CAAATGATTGAATTCTTGAG+GGG + chr1.2:3900003-3900022 MS.gene044022:intron 30.0%
CATAATCTAATCCACTATCT+TGG + chr1.2:3901016-3901035 MS.gene044022:intron 30.0%
CATGTTTCGTAAAAAGTCTT+CGG + chr1.2:3900567-3900586 MS.gene044022:CDS 30.0%
CTATTAGACAAGTATATGTC+AGG + chr1.2:3898285-3898304 MS.gene044022:intron 30.0%
CTATTGTCAAGAGAAAAACT+AGG - chr1.2:3900722-3900741 None:intergenic 30.0%
CTCCTGATGAAAATGAAAAA+GGG - chr1.2:3898934-3898953 None:intergenic 30.0%
CTGACATATACTTGTCTAAT+AGG - chr1.2:3898287-3898306 None:intergenic 30.0%
CTTTGTGATTATAGAAGGAT+GGG + chr1.2:3898733-3898752 MS.gene044022:CDS 30.0%
GATTATGGACACATATTTCA+AGG - chr1.2:3901003-3901022 None:intergenic 30.0%
GCACGTAAATTGCTATATAA+AGG + chr1.2:3897990-3898009 MS.gene044022:intron 30.0%
GCAGAGAAGAAATAAATTCT+GGG + chr1.2:3897965-3897984 MS.gene044022:intron 30.0%
GCATATGGAACTACTTATTT+GGG - chr1.2:3898317-3898336 None:intergenic 30.0%
GTAATTACACGATCATTGTT+TGG + chr1.2:3895916-3895935 MS.gene044022:intron 30.0%
TAAACAAGAGTTTCCAAGAA+AGG - chr1.2:3899319-3899338 None:intergenic 30.0%
TCTATTGGAGATATGGATAT+TGG + chr1.2:3899689-3899708 MS.gene044022:CDS 30.0%
TCTCTTGGTAAAATACATAG+GGG - chr1.2:3899369-3899388 None:intergenic 30.0%
TCTGATTATGTGGTTTAACA+GGG - chr1.2:3899176-3899195 None:intergenic 30.0%
TGCAGAGAAGAAATAAATTC+TGG + chr1.2:3897964-3897983 MS.gene044022:intron 30.0%
TGCATATGGAACTACTTATT+TGG - chr1.2:3898318-3898337 None:intergenic 30.0%
TGTCAAGTAGAAATAAAACC+CGG + chr1.2:3900817-3900836 MS.gene044022:CDS 30.0%
TTAAAAATTCCTGTCAGGTT+TGG + chr1.2:3897082-3897101 MS.gene044022:intron 30.0%
TTTGTGTGATATACCCATTA+AGG - chr1.2:3896560-3896579 None:intergenic 30.0%
! AGAATGCTTGTTTAAAATGC+AGG + chr1.2:3900740-3900759 MS.gene044022:intron 30.0%
! AGTGATGGAAGTTATTAAGA+TGG + chr1.2:3898610-3898629 MS.gene044022:intron 30.0%
! AGTTGTATGATCTTTTTCCA+TGG + chr1.2:3897932-3897951 MS.gene044022:intron 30.0%
! ATTTTACCAAGAGAAATGCT+AGG + chr1.2:3899375-3899394 MS.gene044022:intron 30.0%
! ATTTTTGTTGAGCAACTGTT+TGG + chr1.2:3898883-3898902 MS.gene044022:intron 30.0%
! CTAACACTCACTCTTTTATT+GGG + chr1.2:3899418-3899437 MS.gene044022:intron 30.0%
! CTTTTACCAAATATGATACG+AGG - chr1.2:3897655-3897674 None:intergenic 30.0%
! GATAAAGATTTTGCAGAGAA+AGG + chr1.2:3896449-3896468 MS.gene044022:CDS 30.0%
! GATTAAGAATTTTTGCAGGT+TGG + chr1.2:3899626-3899645 MS.gene044022:intron 30.0%
! GTTAATCCTGGGAATAATTT+TGG - chr1.2:3897513-3897532 None:intergenic 30.0%
! TCTAACACTCACTCTTTTAT+TGG + chr1.2:3899417-3899436 MS.gene044022:intron 30.0%
! TTTTTATTCCCAACAAATCC+CGG - chr1.2:3898104-3898123 None:intergenic 30.0%
!! AAGAGAGTATTGGTAAAATG+AGG - chr1.2:3899556-3899575 None:intergenic 30.0%
!! CAAGATAGTGGATTAGATTA+TGG - chr1.2:3901018-3901037 None:intergenic 30.0%
!! CTTTTTCATTTTCATCAGGA+GGG + chr1.2:3898933-3898952 MS.gene044022:intron 30.0%
!! GGTTGATAATTTGAATTCCT+GGG + chr1.2:3897592-3897611 MS.gene044022:intron 30.0%
!! TATCTCACTTTTACAATCTG+TGG - chr1.2:3900222-3900241 None:intergenic 30.0%
!! TCAAAGTTTCTGAAACAATG+CGG - chr1.2:3899979-3899998 None:intergenic 30.0%
!! TCTTTTGTTTAATCCTACAC+AGG + chr1.2:3899863-3899882 MS.gene044022:intron 30.0%
!! TGGCATATTAGAGTATTGTA+TGG + chr1.2:3897447-3897466 MS.gene044022:intron 30.0%
!! TGGTTGATAATTTGAATTCC+TGG + chr1.2:3897591-3897610 MS.gene044022:intron 30.0%
!! TTAGCACATGATTTAAGTTG+TGG + chr1.2:3897276-3897295 MS.gene044022:intron 30.0%
!! TTTTTCGATTGGATGTTAGT+AGG - chr1.2:3897900-3897919 None:intergenic 30.0%
!!! AATTTTTTGTATGCCTGTGT+AGG - chr1.2:3899879-3899898 None:intergenic 30.0%
!!! ACCTTCACTTGTTTTACATA+TGG - chr1.2:3899734-3899753 None:intergenic 30.0%
!!! ACTTGTTTTACATATGGTAC+AGG - chr1.2:3899728-3899747 None:intergenic 30.0%
!!! CTCACTATATTTTGAAACCT+TGG + chr1.2:3896692-3896711 MS.gene044022:intron 30.0%
!!! CTTGTTTTACATATGGTACA+GGG - chr1.2:3899727-3899746 None:intergenic 30.0%
!!! GTTTTAAAATGTGGTTGCAA+TGG - chr1.2:3897413-3897432 None:intergenic 30.0%
!!! TAGCATGTGGTTTTAAAATG+TGG - chr1.2:3897422-3897441 None:intergenic 30.0%
AAATGTTAGTATTGTGTGGG+AGG - chr1.2:3897233-3897252 None:intergenic 35.0%
AACACGCTAACAAATGCATA+TGG - chr1.2:3898332-3898351 None:intergenic 35.0%
AACTTGAACATGTTGCATAG+TGG - chr1.2:3900781-3900800 None:intergenic 35.0%
AAGAAAACGTGGGTATATTG+CGG + chr1.2:3898030-3898049 MS.gene044022:intron 35.0%
AATGGTCTTTCCAAACACAA+AGG + chr1.2:3898068-3898087 MS.gene044022:intron 35.0%
AATTCCCATCTTAGATTCCT+GGG + chr1.2:3898213-3898232 MS.gene044022:intron 35.0%
AGGAGAAACAAATGCAAACA+AGG - chr1.2:3900342-3900361 None:intergenic 35.0%
ATGGAAGGGAAAAGATCATT+AGG + chr1.2:3900940-3900959 MS.gene044022:CDS 35.0%
ATTACTTGTCAGCAGATCAT+AGG + chr1.2:3898819-3898838 MS.gene044022:CDS 35.0%
ATTAGGTATCATTGCAAGGA+TGG + chr1.2:3896013-3896032 MS.gene044022:intron 35.0%
ATTTCAGATAGACTTAGCAG+CGG + chr1.2:3901046-3901065 MS.gene044022:intron 35.0%
CAATGCATTCAGTGCATAAA+TGG - chr1.2:3896209-3896228 None:intergenic 35.0%
CACATGAGAAAATGAAACCA+GGG - chr1.2:3896263-3896282 None:intergenic 35.0%
CATATTCTGTTTATGGGGTA+TGG + chr1.2:3895716-3895735 MS.gene044022:intron 35.0%
CATCAAAAGAAGCCAGTAAA+AGG + chr1.2:3900532-3900551 MS.gene044022:CDS 35.0%
CATTTGAATAATTGCACTGC+TGG + chr1.2:3898495-3898514 MS.gene044022:intron 35.0%
CCATCCTTCTATAATCACAA+AGG - chr1.2:3898735-3898754 None:intergenic 35.0%
CCTCCTGATGAAAATGAAAA+AGG - chr1.2:3898935-3898954 None:intergenic 35.0%
CCTTTGTGATTATAGAAGGA+TGG + chr1.2:3898732-3898751 MS.gene044022:CDS 35.0%
CGAGAGAAAAAAACGAGATT+AGG + chr1.2:3895996-3896015 MS.gene044022:intron 35.0%
CTCTGATTATGTGGTTTAAC+AGG - chr1.2:3899177-3899196 None:intergenic 35.0%
CTGACAATCAGACTTTAACA+AGG - chr1.2:3895671-3895690 None:intergenic 35.0%
CTTCCAAAGATAAAGAGAAG+AGG + chr1.2:3899089-3899108 MS.gene044022:intron 35.0%
CTTCCTTGATTAAAGCTTGT+AGG + chr1.2:3897135-3897154 MS.gene044022:intron 35.0%
GAAGATTGACAGAAATGAAG+AGG - chr1.2:3900981-3901000 None:intergenic 35.0%
GAGAAGAAATAAATTCTGGG+TGG + chr1.2:3897968-3897987 MS.gene044022:intron 35.0%
GCAACTATTACAAGTACTCT+AGG - chr1.2:3898441-3898460 None:intergenic 35.0%
GCAAGTAACTAGATATGGAA+TGG - chr1.2:3898566-3898585 None:intergenic 35.0%
GCATTGTTTCAGAAACTTTG+AGG + chr1.2:3899978-3899997 MS.gene044022:intron 35.0%
GTACCCAATCCTAACAAATA+TGG - chr1.2:3896896-3896915 None:intergenic 35.0%
GTCACCTTTGTGATTATAGA+AGG + chr1.2:3898728-3898747 MS.gene044022:CDS 35.0%
GTCATTACAGGACAAAAATC+AGG + chr1.2:3898698-3898717 MS.gene044022:intron 35.0%
TAAAACCACATGCTAGTAGT+TGG + chr1.2:3897427-3897446 MS.gene044022:intron 35.0%
TAATTCCCATCTTAGATTCC+TGG + chr1.2:3898212-3898231 MS.gene044022:intron 35.0%
TATCAAGTAAGATGCAACAG+TGG - chr1.2:3897347-3897366 None:intergenic 35.0%
TCACTTCACTTAATGTCTTC+AGG + chr1.2:3900420-3900439 MS.gene044022:intron 35.0%
TCTCTTCATCTCTGATTATG+TGG - chr1.2:3899186-3899205 None:intergenic 35.0%
TGGTTACCAAAATTATTCCC+AGG + chr1.2:3897504-3897523 MS.gene044022:intron 35.0%
TGTCCTCTTCTCTTTATCTT+TGG - chr1.2:3899095-3899114 None:intergenic 35.0%
TGTTAAAGTCTGATTGTCAG+AGG + chr1.2:3895671-3895690 MS.gene044022:CDS 35.0%
TGTTGTCGATATATTACCTC+AGG + chr1.2:3900486-3900505 MS.gene044022:CDS 35.0%
TTATTGGGTGAAACTCATGT+GGG + chr1.2:3899433-3899452 MS.gene044022:intron 35.0%
TTGATGAAGGAACATTATGG+GGG + chr1.2:3897470-3897489 MS.gene044022:intron 35.0%
TTTATTGGGTGAAACTCATG+TGG + chr1.2:3899432-3899451 MS.gene044022:intron 35.0%
TTTGCTCTCAAAAGGATCTA+GGG - chr1.2:3896756-3896775 None:intergenic 35.0%
! AACCTTTTCCCAGGAATAAA+AGG + chr1.2:3897530-3897549 MS.gene044022:intron 35.0%
! AGATTTTGCAGAGAAAGGTA+TGG + chr1.2:3896454-3896473 MS.gene044022:intron 35.0%
! AGGTTGGTCGTTTAAATACA+GGG + chr1.2:3898980-3898999 MS.gene044022:CDS 35.0%
! AGTAGGCAATGCACTTTTAT+TGG - chr1.2:3897883-3897902 None:intergenic 35.0%
! AGTTTTTGTGTGTTTTTCCC+TGG + chr1.2:3896243-3896262 MS.gene044022:intron 35.0%
! ATAATTACTCTGAGAAGCTC+CGG - chr1.2:3896622-3896641 None:intergenic 35.0%
! CAATATACCCACGTTTTCTT+TGG - chr1.2:3898030-3898049 None:intergenic 35.0%
! CGAAGACTTTTTACGAAACA+TGG - chr1.2:3900569-3900588 None:intergenic 35.0%
! CTTTATCTTTGGAAGAGAGT+GGG - chr1.2:3899084-3899103 None:intergenic 35.0%
! GTTGATGAAGGAACATTATG+GGG + chr1.2:3897469-3897488 MS.gene044022:intron 35.0%
! TAACAATGCGACATTGCTTT+TGG + chr1.2:3897006-3897025 MS.gene044022:intron 35.0%
! TAATGATCTTTTCCCTTCCA+TGG - chr1.2:3900941-3900960 None:intergenic 35.0%
! TACTAGAATCTTCTGAAGGA+GGG + chr1.2:3898792-3898811 MS.gene044022:CDS 35.0%
! TATTTGTTAGGATTGGGTAC+TGG + chr1.2:3896896-3896915 MS.gene044022:intron 35.0%
! TCTTTATCTTTGGAAGAGAG+TGG - chr1.2:3899085-3899104 None:intergenic 35.0%
! TGCTGCTGCTATTTATTCTA+AGG + chr1.2:3896322-3896341 MS.gene044022:CDS 35.0%
! TTTATCTTTGGAAGAGAGTG+GGG - chr1.2:3899083-3899102 None:intergenic 35.0%
!! AAAAATGCCCTGCTTTGAAA+AGG - chr1.2:3896863-3896882 None:intergenic 35.0%
!! ATATCTCATGTAAAGGCATC+TGG + chr1.2:3898373-3898392 MS.gene044022:intron 35.0%
!! ATGCTGTTGATTTCATCTTG+CGG + chr1.2:3896039-3896058 MS.gene044022:intron 35.0%
!! CACCCTTTTTCATTTTCATC+AGG + chr1.2:3898929-3898948 MS.gene044022:intron 35.0%
!! CCTTTTTCATTTTCATCAGG+AGG + chr1.2:3898932-3898951 MS.gene044022:intron 35.0%
!! GAGTATTGTATGGTTGATGA+AGG + chr1.2:3897457-3897476 MS.gene044022:intron 35.0%
!! GGTTGATGAAGGAACATTAT+GGG + chr1.2:3897468-3897487 MS.gene044022:intron 35.0%
!! TCTTTGCCTATTTTAGACTC+TGG + chr1.2:3896942-3896961 MS.gene044022:intron 35.0%
!! TGGTTGATGAAGGAACATTA+TGG + chr1.2:3897467-3897486 MS.gene044022:intron 35.0%
!! TTTAAGTTGTGGACTACATC+AGG + chr1.2:3897287-3897306 MS.gene044022:intron 35.0%
!!! TTTACTGGCTTCTTTTGATG+TGG - chr1.2:3900532-3900551 None:intergenic 35.0%
AAAGTCTGATTGTCAGAGGA+TGG + chr1.2:3895675-3895694 MS.gene044022:CDS 40.0%
AAGGTGTGGACTTTATTCCA+AGG + chr1.2:3897549-3897568 MS.gene044022:intron 40.0%
AATAGGCGGTCTACTAACAT+AGG - chr1.2:3898270-3898289 None:intergenic 40.0%
AGAAGAAAGAAGCCATGGAA+GGG + chr1.2:3900926-3900945 MS.gene044022:CDS 40.0%
AGCAAATTAATGTGCAGCAG+TGG + chr1.2:3896531-3896550 MS.gene044022:intron 40.0%
AGTAGAAATAAAACCCGGAG+AGG + chr1.2:3900822-3900841 MS.gene044022:CDS 40.0%
AGTGTTCCTAGCATTTCTCT+TGG - chr1.2:3899384-3899403 None:intergenic 40.0%
ATAGGCGGTCTACTAACATA+GGG - chr1.2:3898269-3898288 None:intergenic 40.0%
ATATGCCAACTACTAGCATG+TGG - chr1.2:3897435-3897454 None:intergenic 40.0%
ATGTACTGAAATACCCTCTC+CGG - chr1.2:3900839-3900858 None:intergenic 40.0%
ATTAAAGCTTGTAGGCACGT+AGG + chr1.2:3897143-3897162 MS.gene044022:intron 40.0%
CAAGCTGGACAAAGTAAGAA+AGG + chr1.2:3895634-3895653 MS.gene044022:CDS 40.0%
CACTATATGACAACGTCATC+AGG - chr1.2:3900362-3900381 None:intergenic 40.0%
CACTCATCTCTGTTAAGATC+CGG - chr1.2:3896383-3896402 None:intergenic 40.0%
CAGGAAGCTTTACAAGCAAA+GGG + chr1.2:3900439-3900458 MS.gene044022:intron 40.0%
CCACATGAGAAAATGAAACC+AGG - chr1.2:3896264-3896283 None:intergenic 40.0%
CGAGATTAGGTATCATTGCA+AGG + chr1.2:3896009-3896028 MS.gene044022:intron 40.0%
CGGTTAACATCCTTTGTGTT+TGG - chr1.2:3898081-3898100 None:intergenic 40.0%
CTCTTTCGGTTCTATTGAAG+CGG + chr1.2:3895566-3895585 MS.gene044022:CDS 40.0%
CTTTGCTCTCAAAAGGATCT+AGG - chr1.2:3896757-3896776 None:intergenic 40.0%
GAACTGTTCCCCAATTGTTA+TGG + chr1.2:3896135-3896154 MS.gene044022:intron 40.0%
GAGAAACCTGAGATTGTTCA+TGG + chr1.2:3895610-3895629 MS.gene044022:CDS 40.0%
GCACGTAAAAGACAAAACAG+CGG - chr1.2:3899921-3899940 None:intergenic 40.0%
GCTGGGAATAATTCATTCCT+TGG + chr1.2:3898150-3898169 MS.gene044022:intron 40.0%
GGAGCTTCTCAGAGTAATTA+TGG + chr1.2:3896621-3896640 MS.gene044022:intron 40.0%
GGTTTAACAGGGCAAACATT+GGG - chr1.2:3899165-3899184 None:intergenic 40.0%
GTACTGGAATTGAACAGCTT+AGG + chr1.2:3896912-3896931 MS.gene044022:intron 40.0%
GTAGAAATAAAACCCGGAGA+GGG + chr1.2:3900823-3900842 MS.gene044022:CDS 40.0%
GTCAACTCAATCTTACACAC+AGG + chr1.2:3899756-3899775 MS.gene044022:intron 40.0%
GTGGGTATAGTTGTTTGATG+CGG - chr1.2:3897386-3897405 None:intergenic 40.0%
GTTGGTCGTTTAAATACAGG+GGG + chr1.2:3898982-3899001 MS.gene044022:CDS 40.0%
GTTGTAACAGTTGCATCAGT+CGG + chr1.2:3898755-3898774 MS.gene044022:CDS 40.0%
TAGGAGATGTACTGTTTGCT+TGG + chr1.2:3897162-3897181 MS.gene044022:intron 40.0%
TCAGGAAGCTTTACAAGCAA+AGG + chr1.2:3900438-3900457 MS.gene044022:intron 40.0%
TCTTTCGGTTCTATTGAAGC+GGG + chr1.2:3895567-3895586 MS.gene044022:CDS 40.0%
TGCGTACTAGAATCTTCTGA+AGG + chr1.2:3898788-3898807 MS.gene044022:CDS 40.0%
TGGACAAAGTAAGAAAGGAG+AGG + chr1.2:3895639-3895658 MS.gene044022:CDS 40.0%
TGGCAACTAAAGCAAAGGAA+AGG - chr1.2:3900904-3900923 None:intergenic 40.0%
TGGTAAAAGAGACGTGTCTT+TGG + chr1.2:3897666-3897685 MS.gene044022:intron 40.0%
TGGTTACAAATTGAGTTCCC+AGG - chr1.2:3898233-3898252 None:intergenic 40.0%
TGGTTTAACAGGGCAAACAT+TGG - chr1.2:3899166-3899185 None:intergenic 40.0%
TGTGCATGTCTACCAAACAT+GGG + chr1.2:3898183-3898202 MS.gene044022:intron 40.0%
TTATTTGCACTCCTCTCAGT+TGG + chr1.2:3896164-3896183 MS.gene044022:intron 40.0%
TTCACGGTCTATTGGAGATA+TGG + chr1.2:3899682-3899701 MS.gene044022:CDS 40.0%
TTGTGTCTTTCACGGTCTAT+TGG + chr1.2:3899674-3899693 MS.gene044022:CDS 40.0%
TTTCCCAGGAATAAAAGGTG+TGG + chr1.2:3897535-3897554 MS.gene044022:intron 40.0%
TTTCCTTTGCTTTAGTTGCC+AGG + chr1.2:3900903-3900922 MS.gene044022:CDS 40.0%
TTTCTTGTCATCCAACTGAG+AGG - chr1.2:3896178-3896197 None:intergenic 40.0%
! AAGTCCACACCTTTTATTCC+TGG - chr1.2:3897542-3897561 None:intergenic 40.0%
! AGTCCACACCTTTTATTCCT+GGG - chr1.2:3897541-3897560 None:intergenic 40.0%
! AGTTCCCAGGAATCTAAGAT+GGG - chr1.2:3898220-3898239 None:intergenic 40.0%
! CACCTTTTATTCCTGGGAAA+AGG - chr1.2:3897535-3897554 None:intergenic 40.0%
! CAGCTATTTGATGGACACAA+TGG + chr1.2:3896296-3896315 MS.gene044022:intron 40.0%
! CCTGGTTTCATTTTCTCATG+TGG + chr1.2:3896261-3896280 MS.gene044022:intron 40.0%
! CTGATGACGTTGTCATATAG+TGG + chr1.2:3900360-3900379 MS.gene044022:intron 40.0%
! GAGGTTGGTCGTTTAAATAC+AGG + chr1.2:3898979-3898998 MS.gene044022:CDS 40.0%
! GATCTAGGGTCAAATCTTCA+GGG - chr1.2:3896742-3896761 None:intergenic 40.0%
! GGTATATTGCGGTTTTACGA+GGG + chr1.2:3898041-3898060 MS.gene044022:intron 40.0%
! GGTTGGTCGTTTAAATACAG+GGG + chr1.2:3898981-3899000 MS.gene044022:CDS 40.0%
! GTACTAGAATCTTCTGAAGG+AGG + chr1.2:3898791-3898810 MS.gene044022:CDS 40.0%
! GTGATAGCTTTGCTCTCAAA+AGG - chr1.2:3896764-3896783 None:intergenic 40.0%
! GTGCCTACAAGCTTTAATCA+AGG - chr1.2:3897141-3897160 None:intergenic 40.0%
! GTTGTCATTTGCCGTTGATT+GGG + chr1.2:3898395-3898414 MS.gene044022:intron 40.0%
! TAATTACTCTGAGAAGCTCC+GGG - chr1.2:3896621-3896640 None:intergenic 40.0%
! TATCTGCAGTGATGGTGTTT+GGG + chr1.2:3900134-3900153 MS.gene044022:CDS 40.0%
! TCGTGTCCAGAGTCTAAAAT+AGG - chr1.2:3896951-3896970 None:intergenic 40.0%
! TGAATCCCTCACTTTGGAAA+TGG - chr1.2:3899480-3899499 None:intergenic 40.0%
! TTATCTGCAGTGATGGTGTT+TGG + chr1.2:3900133-3900152 MS.gene044022:CDS 40.0%
! TTGTTTGATGCGGACTAATG+TGG - chr1.2:3897376-3897395 None:intergenic 40.0%
!! AGAGGGTATTTCAGTACATG+AGG + chr1.2:3900840-3900859 MS.gene044022:CDS 40.0%
!! GAGGGTATTTCAGTACATGA+GGG + chr1.2:3900841-3900860 MS.gene044022:CDS 40.0%
!! TGGGGTGTTTAAGCTTGTTA+TGG - chr1.2:3899065-3899084 None:intergenic 40.0%
!! TGGTAAAATGAGGAGTGCTA+TGG - chr1.2:3899546-3899565 None:intergenic 40.0%
!!! TGTGGGACTGTTTTGATGTT+GGG + chr1.2:3900278-3900297 MS.gene044022:intron 40.0%
!!! TTGTGGGACTGTTTTGATGT+TGG + chr1.2:3900277-3900296 MS.gene044022:intron 40.0%
AAACTGCTTCCAAACCTGAC+AGG - chr1.2:3897094-3897113 None:intergenic 45.0%
AATCCAGCAACCAAAGCTCT+AGG - chr1.2:3896419-3896438 None:intergenic 45.0%
ACACAAAGGATGTTAACCGC+CGG + chr1.2:3898082-3898101 MS.gene044022:intron 45.0%
ACAGCGGTGAAAACATGTGT+AGG - chr1.2:3899905-3899924 None:intergenic 45.0%
ACATGCCACGACAACAATCA+AGG - chr1.2:3900182-3900201 None:intergenic 45.0%
AGAAGATTCTAGTACGCAGC+GGG - chr1.2:3898786-3898805 None:intergenic 45.0%
AGAATACATGGAGCCAGATG+TGG + chr1.2:3900612-3900631 MS.gene044022:CDS 45.0%
AGGGTTCGTATCACTTCTAG+CGG + chr1.2:3898952-3898971 MS.gene044022:CDS 45.0%
CAGAAGATTCTAGTACGCAG+CGG - chr1.2:3898787-3898806 None:intergenic 45.0%
CATCACTGCAGATAACAAGC+CGG - chr1.2:3900128-3900147 None:intergenic 45.0%
CATGCCACGACAACAATCAA+GGG - chr1.2:3900181-3900200 None:intergenic 45.0%
CCATCAAACGGTACCTCTTT+CGG + chr1.2:3895552-3895571 MS.gene044022:CDS 45.0%
CCTCTCAGTTTACCACAGTA+CGG - chr1.2:3899219-3899238 None:intergenic 45.0%
CCTGGGAAAAGGTTAATCCT+GGG - chr1.2:3897524-3897543 None:intergenic 45.0%
CGCTTCAATAGAACCGAAAG+AGG - chr1.2:3895568-3895587 None:intergenic 45.0%
CGGATCTTAACAGAGATGAG+TGG + chr1.2:3896381-3896400 MS.gene044022:CDS 45.0%
CTTACACACAGGACAGTGTT+TGG + chr1.2:3899767-3899786 MS.gene044022:intron 45.0%
GAAATGGCTCCCACATAAAG+TGG - chr1.2:3899464-3899483 None:intergenic 45.0%
GACAAGTATATGTCAGGCGT+AGG + chr1.2:3898291-3898310 MS.gene044022:intron 45.0%
GAGAAGAAAGAAGCCATGGA+AGG + chr1.2:3900925-3900944 MS.gene044022:CDS 45.0%
GAGATGTACTGTTTGCTTGG+TGG + chr1.2:3897165-3897184 MS.gene044022:intron 45.0%
GAGATTGTTCATGGTCAAGC+TGG + chr1.2:3895619-3895638 MS.gene044022:CDS 45.0%
GAGGAGTGAACACCATCAAA+CGG + chr1.2:3895540-3895559 MS.gene044022:CDS 45.0%
GAGTAATGTGAACCGTACTG+TGG + chr1.2:3899204-3899223 MS.gene044022:intron 45.0%
GAGTTCCCAGGAATCTAAGA+TGG - chr1.2:3898221-3898240 None:intergenic 45.0%
GCCAGTAAAAGGAATGCTCA+AGG + chr1.2:3900543-3900562 MS.gene044022:CDS 45.0%
GCTTGACCATGAACAATCTC+AGG - chr1.2:3895619-3895638 None:intergenic 45.0%
GTGTGCATGTCTACCAAACA+TGG + chr1.2:3898182-3898201 MS.gene044022:intron 45.0%
TACTGTGGTAAACTGAGAGG+CGG + chr1.2:3899219-3899238 MS.gene044022:intron 45.0%
TAGGCGGTCTACTAACATAG+GGG - chr1.2:3898268-3898287 None:intergenic 45.0%
TCATCTCTGTTAAGATCCGG+AGG - chr1.2:3896380-3896399 None:intergenic 45.0%
TCCAAAGTGAGGGATTCACA+CGG + chr1.2:3899482-3899501 MS.gene044022:intron 45.0%
TCCTGGGAAAAGGTTAATCC+TGG - chr1.2:3897525-3897544 None:intergenic 45.0%
TCTCCTGGCAACTAAAGCAA+AGG - chr1.2:3900909-3900928 None:intergenic 45.0%
TCTGATTGTCAGAGGATGGT+TGG + chr1.2:3895679-3895698 MS.gene044022:CDS 45.0%
TGCTTTGCACACGTTCAGAT+TGG + chr1.2:3895791-3895810 MS.gene044022:intron 45.0%
TGGGTCTCACCACTTTATGT+GGG + chr1.2:3899452-3899471 MS.gene044022:intron 45.0%
TGTACTGAAATACCCTCTCC+GGG - chr1.2:3900838-3900857 None:intergenic 45.0%
TGTTAGTATTGTGTGGGAGG+TGG - chr1.2:3897230-3897249 None:intergenic 45.0%
TGTTGTCAGTGCAATTCCTC+CGG + chr1.2:3896361-3896380 MS.gene044022:CDS 45.0%
TTAATTCAGCTGTCTACCGC+TGG + chr1.2:3900099-3900118 MS.gene044022:intron 45.0%
TTATTCCCAACAAATCCCGG+CGG - chr1.2:3898101-3898120 None:intergenic 45.0%
! AGGGAACTCCTTTTCAAAGC+AGG + chr1.2:3896852-3896871 MS.gene044022:intron 45.0%
! CGGTTTTACGAGGGTAGAAA+TGG + chr1.2:3898050-3898069 MS.gene044022:intron 45.0%
! GCCTTGAGCATTCCTTTTAC+TGG - chr1.2:3900547-3900566 None:intergenic 45.0%
! GGATCTAGGGTCAAATCTTC+AGG - chr1.2:3896743-3896762 None:intergenic 45.0%
! GGCTTCTTTTGATGTGGTAC+AGG - chr1.2:3900526-3900545 None:intergenic 45.0%
! GGGAACTCCTTTTCAAAGCA+GGG + chr1.2:3896853-3896872 MS.gene044022:intron 45.0%
! GGGTATATTGCGGTTTTACG+AGG + chr1.2:3898040-3898059 MS.gene044022:intron 45.0%
! GGTTGTCATTTGCCGTTGAT+TGG + chr1.2:3898394-3898413 MS.gene044022:intron 45.0%
! GTACTGTTTGCTTGGTGGTT+GGG + chr1.2:3897170-3897189 MS.gene044022:intron 45.0%
! TACTGTTTGCTTGGTGGTTG+GGG + chr1.2:3897171-3897190 MS.gene044022:intron 45.0%
! TGTACTGTTTGCTTGGTGGT+TGG + chr1.2:3897169-3897188 MS.gene044022:intron 45.0%
! TTTTGATGTGGTACAGGAGC+AGG - chr1.2:3900520-3900539 None:intergenic 45.0%
!! AGGTTGGTCCTTTGAGATGT+TGG + chr1.2:3899642-3899661 MS.gene044022:intron 45.0%
!! GTTAGCACTGATGCCTTAAC+AGG - chr1.2:3896980-3896999 None:intergenic 45.0%
!!! TCTCTGCACTGATTTTGCCA+TGG - chr1.2:3897952-3897971 None:intergenic 45.0%
!!! ATTATATTTTTGATTTTTAA+TGG + chr1.2:3896799-3896818 MS.gene044022:intron 5.0%
!!! ATTTTATAATTTTTTTTTGT+GGG + chr1.2:3900261-3900280 MS.gene044022:intron 5.0%
AAAGGAAAGGTCCATCCCAG+GGG - chr1.2:3900891-3900910 None:intergenic 50.0%
ACTGTGGTAAACTGAGAGGC+GGG + chr1.2:3899220-3899239 MS.gene044022:intron 50.0%
AGGCGGTCTACTAACATAGG+GGG - chr1.2:3898267-3898286 None:intergenic 50.0%
ATGTGGTTGCAATGGCGTTG+TGG - chr1.2:3897405-3897424 None:intergenic 50.0%
CAAAGGAAAGGTCCATCCCA+GGG - chr1.2:3900892-3900911 None:intergenic 50.0%
CACAAAGGATGTTAACCGCC+GGG + chr1.2:3898083-3898102 MS.gene044022:intron 50.0%
CCAAAGTGAGGGATTCACAC+GGG + chr1.2:3899483-3899502 MS.gene044022:intron 50.0%
CCAGGAGAAGAAAGAAGCCA+TGG + chr1.2:3900921-3900940 MS.gene044022:CDS 50.0%
CCATGGCTTCTTTCTTCTCC+TGG - chr1.2:3900924-3900943 None:intergenic 50.0%
CCGTACTGTGGTAAACTGAG+AGG + chr1.2:3899216-3899235 MS.gene044022:intron 50.0%
CTGCTGGAAGTTATAACCGC+AGG + chr1.2:3898511-3898530 MS.gene044022:intron 50.0%
GACACGAGTCTTGCCTGTTA+AGG + chr1.2:3896964-3896983 MS.gene044022:intron 50.0%
GCAGCAGTGGCAACCTTAAT+GGG + chr1.2:3896544-3896563 MS.gene044022:intron 50.0%
GCCTAGTCTCTCCCAATCAA+CGG - chr1.2:3898409-3898428 None:intergenic 50.0%
GCTCTGCTATGCTTTCAGAG+AGG + chr1.2:3900656-3900675 MS.gene044022:CDS 50.0%
GGATGCTTTACCTGCAGAAG+TGG + chr1.2:3900155-3900174 MS.gene044022:CDS 50.0%
GGGAGCCATTTCCAAAGTGA+GGG + chr1.2:3899472-3899491 MS.gene044022:intron 50.0%
GGTCGTTTAAATACAGGGGG+AGG + chr1.2:3898985-3899004 MS.gene044022:CDS 50.0%
GTGGGTCTCACCACTTTATG+TGG + chr1.2:3899451-3899470 MS.gene044022:intron 50.0%
GTTCGTATCACTTCTAGCGG+CGG + chr1.2:3898955-3898974 MS.gene044022:CDS 50.0%
TACAGCTCCACTACCACATC+TGG - chr1.2:3900628-3900647 None:intergenic 50.0%
TGCAGCAGTGGCAACCTTAA+TGG + chr1.2:3896543-3896562 MS.gene044022:intron 50.0%
TGGGAGCCATTTCCAAAGTG+AGG + chr1.2:3899471-3899490 MS.gene044022:intron 50.0%
TGTGGTTGCAATGGCGTTGT+GGG - chr1.2:3897404-3897423 None:intergenic 50.0%
TGTTAACCGCCGGGATTTGT+TGG + chr1.2:3898092-3898111 MS.gene044022:intron 50.0%
! CCCAGGATTAACCTTTTCCC+AGG + chr1.2:3897521-3897540 MS.gene044022:intron 50.0%
! CGGGCGTCTTGTTGATTACT+AGG + chr1.2:3899239-3899258 MS.gene044022:intron 50.0%
! GTGGACTACATCAGGCAATG+CGG + chr1.2:3897295-3897314 MS.gene044022:intron 50.0%
! GTTAACCGCCGGGATTTGTT+GGG + chr1.2:3898093-3898112 MS.gene044022:intron 50.0%
! TTGCCTAGAGCTTTGGTTGC+TGG + chr1.2:3896413-3896432 MS.gene044022:CDS 50.0%
!! CATAGGGGGCGTTTGTTTCA+TGG - chr1.2:3898253-3898272 None:intergenic 50.0%
!! CCGAAAGAGGTACCGTTTGA+TGG - chr1.2:3895555-3895574 None:intergenic 50.0%
!! CGGCTTGTTATCTGCAGTGA+TGG + chr1.2:3900126-3900145 MS.gene044022:CDS 50.0%
!! GTCAGAGGATGGTTGGTGAT+GGG + chr1.2:3895686-3895705 MS.gene044022:CDS 50.0%
!! TCAGAGGATGGTTGGTGATG+GGG + chr1.2:3895687-3895706 MS.gene044022:CDS 50.0%
!! TGTCAGAGGATGGTTGGTGA+TGG + chr1.2:3895685-3895704 MS.gene044022:CDS 50.0%
!! TTATGGGGGCGTTTGTTTCG+TGG + chr1.2:3897484-3897503 MS.gene044022:intron 50.0%
AGCAGCGTTGCCTAGAGCTT+TGG + chr1.2:3896406-3896425 MS.gene044022:CDS 55.0%
ATTCAGCTGTCTACCGCTGG+AGG + chr1.2:3900102-3900121 MS.gene044022:intron 55.0%
CAATCAAGGGCCACTTCTGC+AGG - chr1.2:3900168-3900187 None:intergenic 55.0%
CATGGAGCCAGATGTGGTAG+TGG + chr1.2:3900618-3900637 MS.gene044022:CDS 55.0%
CCCGTGTGAATCCCTCACTT+TGG - chr1.2:3899486-3899505 None:intergenic 55.0%
CCGTGAAAGACACAAGCCAC+CGG - chr1.2:3899669-3899688 None:intergenic 55.0%
CGTGAAAGACACAAGCCACC+GGG - chr1.2:3899668-3899687 None:intergenic 55.0%
GCAAAGGAAAGGTCCATCCC+AGG - chr1.2:3900893-3900912 None:intergenic 55.0%
GGGGGAGTGATAAGGAGAGA+GGG + chr1.2:3897196-3897215 MS.gene044022:intron 55.0%
GTGGCCCTTGATTGTTGTCG+TGG + chr1.2:3900174-3900193 MS.gene044022:CDS 55.0%
TATCACTTCTAGCGGCGGTG+AGG + chr1.2:3898960-3898979 MS.gene044022:CDS 55.0%
TGATGTGGTACAGGAGCAGG+TGG - chr1.2:3900517-3900536 None:intergenic 55.0%
TTGTCGTGGCATGTCAGCAG+AGG + chr1.2:3900188-3900207 MS.gene044022:CDS 55.0%
! AAATACAGGGGGAGGTGCAG+AGG + chr1.2:3898993-3899012 MS.gene044022:CDS 55.0%
! CCGGTGGCTTGTGTCTTTCA+CGG + chr1.2:3899666-3899685 MS.gene044022:CDS 55.0%
! GCCGTTGATTGGGAGAGACT+AGG + chr1.2:3898405-3898424 MS.gene044022:intron 55.0%
! GTAGTGGAGCTGTACGAGGA+AGG + chr1.2:3900634-3900653 MS.gene044022:CDS 55.0%
! GTTTGCTTGGTGGTTGGGGT+GGG + chr1.2:3897175-3897194 MS.gene044022:intron 55.0%
! TGTTTGCTTGGTGGTTGGGG+TGG + chr1.2:3897174-3897193 MS.gene044022:intron 55.0%
! TTTGCTTGGTGGTTGGGGTG+GGG + chr1.2:3897176-3897195 MS.gene044022:intron 55.0%
!! GGTCCTTTGAGATGTTGGCC+CGG + chr1.2:3899647-3899666 MS.gene044022:CDS 55.0%
!! TGTGGTAGTGGAGCTGTACG+AGG + chr1.2:3900630-3900649 MS.gene044022:CDS 55.0%
ACTTCTAGCGGCGGTGAGGT+TGG + chr1.2:3898964-3898983 MS.gene044022:CDS 60.0%
CCACCGGGCCAACATCTCAA+AGG - chr1.2:3899653-3899672 None:intergenic 60.0%
GATAACAAGCCGGCCTCCAG+CGG - chr1.2:3900118-3900137 None:intergenic 60.0%
GGGGGGAGTGATAAGGAGAG+AGG + chr1.2:3897195-3897214 MS.gene044022:intron 60.0%
TTGGGGTGGGGGGAGTGATA+AGG + chr1.2:3897188-3897207 MS.gene044022:intron 60.0%
! ACCCTCAAAAAGTGCGCCCC+TGG + chr1.2:3900872-3900891 MS.gene044022:CDS 60.0%
! CAAAAAGTGCGCCCCTGGGA+TGG + chr1.2:3900877-3900896 MS.gene044022:CDS 60.0%
! CCCTCAAAAAGTGCGCCCCT+GGG + chr1.2:3900873-3900892 MS.gene044022:CDS 60.0%
! TTGCTTGGTGGTTGGGGTGG+GGG + chr1.2:3897177-3897196 MS.gene044022:intron 60.0%
!! CCCAGGGGCGCACTTTTTGA+GGG - chr1.2:3900876-3900895 None:intergenic 60.0%
!! CCTTTGAGATGTTGGCCCGG+TGG + chr1.2:3899650-3899669 MS.gene044022:CDS 60.0%
!! TCCCAGGGGCGCACTTTTTG+AGG - chr1.2:3900877-3900896 None:intergenic 60.0%
AGCTGTCTACCGCTGGAGGC+CGG + chr1.2:3900106-3900125 MS.gene044022:intron 65.0%
GGAGCAGGTGGCTTCTCCTG+AGG - chr1.2:3900505-3900524 None:intergenic 65.0%
! TGCTTGGTGGTTGGGGTGGG+GGG + chr1.2:3897178-3897197 MS.gene044022:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 3895532 3901081 3895532 ID=MS.gene044022
chr1.2 mRNA 3895532 3901081 3895532 ID=MS.gene044022.t1;Parent=MS.gene044022
chr1.2 exon 3895532 3895732 3895532 ID=MS.gene044022.t1.exon1;Parent=MS.gene044022.t1
chr1.2 CDS 3895532 3895732 3895532 ID=cds.MS.gene044022.t1;Parent=MS.gene044022.t1
chr1.2 exon 3896299 3896470 3896299 ID=MS.gene044022.t1.exon2;Parent=MS.gene044022.t1
chr1.2 CDS 3896299 3896470 3896299 ID=cds.MS.gene044022.t1;Parent=MS.gene044022.t1
chr1.2 exon 3898708 3898861 3898708 ID=MS.gene044022.t1.exon3;Parent=MS.gene044022.t1
chr1.2 CDS 3898708 3898861 3898708 ID=cds.MS.gene044022.t1;Parent=MS.gene044022.t1
chr1.2 exon 3898951 3899014 3898951 ID=MS.gene044022.t1.exon4;Parent=MS.gene044022.t1
chr1.2 CDS 3898951 3899014 3898951 ID=cds.MS.gene044022.t1;Parent=MS.gene044022.t1
chr1.2 exon 3899644 3899751 3899644 ID=MS.gene044022.t1.exon5;Parent=MS.gene044022.t1
chr1.2 CDS 3899644 3899751 3899644 ID=cds.MS.gene044022.t1;Parent=MS.gene044022.t1
chr1.2 exon 3900108 3900233 3900108 ID=MS.gene044022.t1.exon6;Parent=MS.gene044022.t1
chr1.2 CDS 3900108 3900233 3900108 ID=cds.MS.gene044022.t1;Parent=MS.gene044022.t1
chr1.2 exon 3900442 3900677 3900442 ID=MS.gene044022.t1.exon7;Parent=MS.gene044022.t1
chr1.2 CDS 3900442 3900677 3900442 ID=cds.MS.gene044022.t1;Parent=MS.gene044022.t1
chr1.2 exon 3900762 3900961 3900762 ID=MS.gene044022.t1.exon8;Parent=MS.gene044022.t1
chr1.2 CDS 3900762 3900961 3900762 ID=cds.MS.gene044022.t1;Parent=MS.gene044022.t1
chr1.2 exon 3901053 3901081 3901053 ID=MS.gene044022.t1.exon9;Parent=MS.gene044022.t1
chr1.2 CDS 3901053 3901081 3901053 ID=cds.MS.gene044022.t1;Parent=MS.gene044022.t1
Gene Sequence

>MS.gene044022

ATGTCTGTGAGGAGTGAACACCATCAAACGGTACCTCTTTCGGTTCTATTGAAGCGGGAGTTGATGAGCGAGAAAATTGAGAAACCTGAGATTGTTCATGGTCAAGCTGGACAAAGTAAGAAAGGAGAGGATTTCGCCTTGTTAAAGTCTGATTGTCAGAGGATGGTTGGTGATGGGGTCTATACATATTCTGTTTATGGGGTATGGTGCTTTTCCATATTCAATTACTGATTTTGTTATTGCAGGTTTCAATTTCATGTGCTTTGCACACGTTCAGATTGGTTTAAATCTTTATAGAGAATTTAAACCTGAGATATTCATAAATATTGAGATGGAGAAGCTAAATTTGATTTATACTAGCAATTATTGTTTAAAATGCTTGTGGTAATTACACGATCATTGTTTGGAAAATTTATCTGAACTGGTTATTATTACCATTCTATTTTATGGCTTGACTTGATGAACGAGAGAAAAAAACGAGATTAGGTATCATTGCAAGGATGGTAAATGCTGTTGATTTCATCTTGCGGAGTTGTTACTTTTGATAGATTTATTGACAATACACAGAGATTTTGAATTTATGACTCTATTGATGTGAAGTGTGAACTGTTCCCCAATTGTTATGGTTTTGTTTATTTGCACTCCTCTCAGTTGGATGACAAGAAAGTTTTTAGCCATTTATGCACTGAATGCATTGTTGTTATTTTTCATAGTTTTTGTGTGTTTTTCCCTGGTTTCATTTTCTCATGTGGAAGTTTTACTTACAGCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATTCTAAGGAGAATCTTCTAAATAATGTTGTCAGTGCAATTCCTCCGGATCTTAACAGAGATGAGTGGTTAGCAGCGTTGCCTAGAGCTTTGGTTGCTGGATTTGTGAAAACTGATAAAGATTTTGCAGAGAAAGGTATGGATAATTTCTTTCTTTTAGTGTTTGCTCTGTTGTCTCTTAATTATTTGTATAAGAAGCAAATTAATGTGCAGCAGTGGCAACCTTAATGGGTATATCACACAAAGCATTTGTAAATATTTTTATTTTTATTTTCATCTATCACCCGGAGCTTCTCAGAGTAATTATGGATGTTAAATAATAGAGAGAAAAAAGGGTTGCAGATAATTTGTTCAGTGCTCACTATATTTTGAAACCTTGGTATAATCTTTTGTATTTCTAAAATCCCTGAAGATTTGACCCTAGATCCTTTTGAGAGCAAAGCTATCACAATATTCCTCTTGCTATTATATTTTTGATTTTTAATGGTTATGGTTTGATTGTAAATGATAATAGATGAGGGAACTCCTTTTCAAAGCAGGGCATTTTTTTATATATAACCATATTTGTTAGGATTGGGTACTGGAATTGAACAGCTTAGGCTGAGCTTCTTTGCCTATTTTAGACTCTGGACACGAGTCTTGCCTGTTAAGGCATCAGTGCTAACTAGCTTTAACAATGCGACATTGCTTTTGGCTCGACTATACAAATTTATCAAGAAAGTCATTTTTCTTAACAGAAGTTAAATCTTAAAAATTCCTGTCAGGTTTGGAAGCAGTTTATGTAGTTTGAGTGTTCGACACTTCCTTGATTAAAGCTTGTAGGCACGTAGGAGATGTACTGTTTGCTTGGTGGTTGGGGTGGGGGGAGTGATAAGGAGAGAGGGTTTGATCTCCACCTCCCACACAATACTAACATTTGTTTACTCATATGGACCGTATAGTTAGCACATGATTTAAGTTGTGGACTACATCAGGCAATGCGGTTACATCTTATCATATAAAGCAGCTGCCACTGTTGCATCTTACTTGATATGAGAACCACATTAGTCCGCATCAAACAACTATACCCACAACGCCATTGCAACCACATTTTAAAACCACATGCTAGTAGTTGGCATATTAGAGTATTGTATGGTTGATGAAGGAACATTATGGGGGCGTTTGTTTCGTGGTTACCAAAATTATTCCCAGGATTAACCTTTTCCCAGGAATAAAAGGTGTGGACTTTATTCCAAGGAATGTTCAAAAAATATGTTTGGTTGATAATTTGAATTCCTGGGAATTATTTTTAAAAAATATATATAATTATCAAAATACCCTCGTATCATATTTGGTAAAAGAGACGTGTCTTTGGTTTTCTCTATTACTTCAAATTATTACTATTCATATCAATGAACAATCTAAACATGTAATTCATCAAAAAGAATCTAAACCAGTATATTTGAGAGTTTTATTTCATACATCAATTCATCTATGTTTTCTTTTATTGATGCAATCAAAATAATATGACTTTTGTAAGAAAAAAACAATATGACATTTATTGTTCCAATAAAAGTGCATTGCCTACTAACATCCAATCGAAAAAACAAATATTAAAAGTTGTATGATCTTTTTCCATGGCAAAATCAGTGCAGAGAAGAAATAAATTCTGGGTGGCACGTAAATTGCTATATAAAGGTAGTGGATATATAACCAAAGAAAACGTGGGTATATTGCGGTTTTACGAGGGTAGAAATGGTCTTTCCAAACACAAAGGATGTTAACCGCCGGGATTTGTTGGGAATAAAAACAATGCAGTATAGTGTAAAAAATATTGCTGGGAATAATTCATTCCTTGGAATATTTTTGTGTGCATGTCTACCAAACATGGGAATAAATAATTCCCATCTTAGATTCCTGGGAACTCAATTTGTAACCATGAAACAAACGCCCCCTATGTTAGTAGACCGCCTATTAGACAAGTATATGTCAGGCGTAGGCCCAAATAAGTAGTTCCATATGCATTTGTTAGCGTGTTGTGTTTTTAAATAGAATAAGGATATCTCATGTAAAGGCATCTGGTTGTCATTTGCCGTTGATTGGGAGAGACTAGGCTCTCTAATTCCTAGAGTACTTGTAATAGTTGCTGTGTTTTTAATTTTATCAGTTTGTAACTTGCTTCATTTGAATAATTGCACTGCTGGAAGTTATAACCGCAGGCATTCAATAATATTCTGCAGTATTCATATCCATTCCATATCTAGTTACTTGCCAAATTATTAAGATCACATTAACTAGTGATGGAAGTTATTAAGATGGTGTGACTGAGCTGTGATTGATAGTTTTTATACTTCTCAATTAATGTTTTTTAATTTCTATATTTTGTCATTACAGGACAAAAATCAGGAACAACTGTCACCTTTGTGATTATAGAAGGATGGGTTGTAACAGTTGCATCAGTCGGCGATTCCCGCTGCGTACTAGAATCTTCTGAAGGAGGGATTTATTACTTGTCAGCAGATCATAGGCTAGAAACAAATGAAGAAGAGTAAGTTGTAGATCATTTTTTATTTTTGTTGAGCAACTGTTTGGAATTGTTTCGTTATTAATGGCATCACCCTTTTTCATTTTCATCAGGAGGGTTCGTATCACTTCTAGCGGCGGTGAGGTTGGTCGTTTAAATACAGGGGGAGGTGCAGAGGTACATTTTCTTTTAGTTTTATCCTTTTTAACTCATATGTTTTTGTTCCATAACAAGCTTAAACACCCCACTCTCTTCCAAAGATAAAGAGAAGAGGACAGCTTGTTCATATGTCTGATGCATCCAGTAATACTTTAATTTTTGGTACCCAATGTTTGCCCTGTTAAACCACATAATCAGAGATGAAGAGAGTAATGTGAACCGTACTGTGGTAAACTGAGAGGCGGGCGTCTTGTTGATTACTAGGCCATATAAAATTAAGAATATAGTACTCATTGCATCTCTTTAAAACATTTTACAACCTTTCTTGGAAACTCTTGTTTAGAATCTTTAGATGATAGGTAACTATCTCCCCTATGTATTTTACCAAGAGAAATGCTAGGAACACTCTTTCTAACACTCTCTAACACTCACTCTTTTATTGGGTGAAACTCATGTGGGTCTCACCACTTTATGTGGGAGCCATTTCCAAAGTGAGGGATTCACACGGGTTTCACTCAATACGAGAGTGAGTGTTAGAAAGAGTGTCCATAGCACTCCTCATTTTACCAATACTCTCTTTAGAAGATTTTTGCATTTGAGTTAATATTACTAATATAACTGGCTGACTAGATTAAGAATTTTTGCAGGTTGGTCCTTTGAGATGTTGGCCCGGTGGCTTGTGTCTTTCACGGTCTATTGGAGATATGGATATTGGTGAATTTGTTGTCCCTGTACCATATGTAAAACAAGTGAAGGTTAGTCAACTCAATCTTACACACAGGACAGTGTTTGGCTTATGTTAATACTTTACTTTCCATTTGCACCCCGTTTGCTCTCAAGGTTACTTATTCTGTATATTTCTTTTCTCTTTTGTTTAATCCTACACAGGCATACAAAAAATTAATCCTACACATGTTTTCACCGCTGTTTTGTCTTTTACGTGCATGTATAGTTTCTTCTTAGCAAGCGTTTCTGCTAACCGCATTGTTTCAGAAACTTTGAGGATCAAATGATTGAATTCTTGAGGGGTTATGAAATTGTTGTCTGCTTCCAAGAAATCTTTGTGTGCATTTTTTTGAATGAAGAATTTAATTTATTTCTTTTAATTCAGCTGTCTACCGCTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTTTGGGATGCTTTACCTGCAGAAGTGGCCCTTGATTGTTGTCGTGGCATGTCAGCAGAGGCTGCTGCACCACAGATTGTAAAAGTGAGATAAATGGTCATCTTTTGAATCATTTTATAATTTTTTTTTGTGGGACTGTTTTGATGTTGGGTATAATAGTAATTTCCGATTTCAACATCATAAGATATACCTTGTTTGCATTTGTTTCTCCTGATGACGTTGTCATATAGTGGTATGAAACTATGAATTGCGCATTTCTTTCTTTTATTCTCACTTCACTTAATGTCTTCAGGAAGCTTTACAAGCAAAGGGACTTAGAGATGATACAACCTGTATTGTTGTCGATATATTACCTCAGGAGAAGCCACCTGCTCCTGTACCACATCAAAAGAAGCCAGTAAAAGGAATGCTCAAGGCCATGTTTCGTAAAAAGTCTTCGGAATCATCATCTTATATTGACAAAGAATACATGGAGCCAGATGTGGTAGTGGAGCTGTACGAGGAAGGCTCTGCTATGCTTTCAGAGAGGTTTAATTTTGTAATATCTGTTGTCAAAGTTAGCAGCTTACCCTAGTTTTTCTCTTGACAATAGAATGCTTGTTTAAAATGCAGGTTAGAAACAAAATATCCACTATGCAACATGTTCAAGTTGTTCATATGTGCAGTATGTCAAGTAGAAATAAAACCCGGAGAGGGTATTTCAGTACATGAGGGTGCAGAAAACCCTCAAAAAGTGCGCCCCTGGGATGGACCTTTCCTTTGCTTTAGTTGCCAGGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCATTAGGTATTTTTTTACGACTCCTCTTCATTTCTGTCAATCTTCCTTGAAATATGTGTCCATAATCTAATCCACTATCTTGGTCTTTTCATTTCAGATAGACTTAGCAGCGGAAGTGACGAATGA
Protein sequence

>MS.gene044022.t1

MSVRSEHHQTVPLSVLLKRELMSEKIEKPEIVHGQAGQSKKGEDFALLKSDCQRMVGDGVYTYSVYGLFDGHNGSAAAIYSKENLLNNVVSAIPPDLNRDEWLAALPRALVAGFVKTDKDFAEKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSEGGIYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFVVPVPYVKQVKLSTAGGRLVICSDGVWDALPAEVALDCCRGMSAEAAAPQIVKEALQAKGLRDDTTCIVVDILPQEKPPAPVPHQKKPVKGMLKAMFRKKSSESSSYIDKEYMEPDVVVELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISVHEGAENPQKVRPWDGPFLCFSCQEKKEAMEGKRSLDRLSSGSDE