Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072843.t1 | XP_003603315.1 | 96.5 | 226 | 6 | 2 | 21 | 245 | 122 | 346 | 9.00E-108 | 399.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072843.t1 | G7J9W6 | 96.5 | 226 | 6 | 2 | 21 | 245 | 122 | 346 | 6.5e-108 | 399.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04917 | MS.gene072843 | 0.800409 | 1.46E-48 | -1.69E-46 |
| MS.gene052016 | MS.gene072843 | 0.825933 | 3.58E-54 | -1.69E-46 |
| MS.gene054617 | MS.gene072843 | 0.824144 | 9.46E-54 | -1.69E-46 |
| MS.gene058720 | MS.gene072843 | 0.831793 | 1.36E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072843.t1 | MTR_3g106250 | 97.788 | 226 | 3 | 2 | 21 | 245 | 122 | 346 | 1.09e-159 | 446 |
| MS.gene072843.t1 | MTR_1g013100 | 46.122 | 245 | 88 | 7 | 21 | 245 | 106 | 326 | 3.45e-53 | 175 |
| MS.gene072843.t1 | MTR_7g114790 | 33.333 | 234 | 106 | 7 | 21 | 244 | 111 | 304 | 9.94e-34 | 124 |
| MS.gene072843.t1 | MTR_1g081260 | 42.208 | 154 | 81 | 4 | 21 | 168 | 114 | 265 | 3.64e-33 | 122 |
| MS.gene072843.t1 | MTR_7g095100 | 31.780 | 236 | 105 | 8 | 21 | 244 | 114 | 305 | 1.09e-31 | 118 |
| MS.gene072843.t1 | MTR_5g069570 | 36.464 | 181 | 105 | 4 | 21 | 192 | 120 | 299 | 3.50e-31 | 117 |
| MS.gene072843.t1 | MTR_4g104760 | 40.127 | 157 | 74 | 5 | 18 | 158 | 114 | 266 | 1.11e-29 | 113 |
| MS.gene072843.t1 | MTR_3g082430 | 38.854 | 157 | 88 | 3 | 19 | 168 | 102 | 257 | 2.32e-29 | 112 |
| MS.gene072843.t1 | MTR_5g096570 | 40.845 | 142 | 79 | 2 | 21 | 158 | 1276 | 1416 | 4.12e-27 | 109 |
| MS.gene072843.t1 | MTR_7g103900 | 35.099 | 151 | 88 | 4 | 18 | 158 | 123 | 273 | 8.90e-26 | 102 |
| MS.gene072843.t1 | MTR_3g076610 | 34.969 | 163 | 76 | 4 | 22 | 158 | 116 | 274 | 3.63e-25 | 101 |
| MS.gene072843.t1 | MTR_4g055230 | 32.759 | 174 | 89 | 7 | 21 | 174 | 126 | 291 | 3.43e-24 | 98.6 |
| MS.gene072843.t1 | MTR_2g084965 | 36.552 | 145 | 82 | 5 | 22 | 158 | 132 | 274 | 8.31e-22 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072843.t1 | AT5G11000 | 57.927 | 164 | 62 | 2 | 18 | 174 | 125 | 288 | 6.15e-57 | 186 |
| MS.gene072843.t1 | AT2G25200 | 38.559 | 236 | 112 | 8 | 21 | 245 | 141 | 354 | 1.16e-33 | 124 |
| MS.gene072843.t1 | AT4G12690 | 40.789 | 152 | 86 | 2 | 21 | 169 | 110 | 260 | 1.16e-32 | 120 |
| MS.gene072843.t1 | AT4G12690 | 40.789 | 152 | 86 | 2 | 21 | 169 | 110 | 260 | 1.16e-32 | 120 |
| MS.gene072843.t1 | AT2G04220 | 40.667 | 150 | 84 | 2 | 21 | 166 | 114 | 262 | 4.95e-32 | 119 |
| MS.gene072843.t1 | AT3G04860 | 30.702 | 228 | 101 | 5 | 21 | 244 | 113 | 287 | 1.80e-31 | 117 |
| MS.gene072843.t1 | AT5G28150 | 39.716 | 141 | 81 | 3 | 21 | 158 | 113 | 252 | 1.49e-30 | 115 |
| MS.gene072843.t1 | AT5G48270 | 34.641 | 153 | 96 | 2 | 10 | 158 | 117 | 269 | 2.87e-27 | 107 |
| MS.gene072843.t1 | AT2G27770 | 36.667 | 150 | 83 | 4 | 21 | 158 | 135 | 284 | 1.16e-25 | 102 |
| MS.gene072843.t1 | AT3G13229 | 38.095 | 147 | 83 | 4 | 19 | 158 | 92 | 237 | 1.86e-25 | 101 |
Find 59 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTATGAGTTAGGGAAAA+TGG | 0.148677 | 3.2:+87711391 | MS.gene072843:CDS |
| GGCGCAACAGAATTTGAATT+TGG | 0.231211 | 3.2:+87711367 | MS.gene072843:CDS |
| GCTTCTTCTGGTGGATCTTT+TGG | 0.246906 | 3.2:+87711446 | MS.gene072843:CDS |
| TGGCGCAAGTTCTTCTGTTT+TGG | 0.250517 | 3.2:+87711466 | MS.gene072843:CDS |
| TCTCATGGGATGTTTATAAT+TGG | 0.252772 | 3.2:+87711231 | MS.gene072843:CDS |
| AATTTGGGTGTTTATGAGTT+AGG | 0.282260 | 3.2:+87711383 | MS.gene072843:CDS |
| ATTCTTGTGTTCTTTACATT+TGG | 0.286420 | 3.2:-87710982 | None:intergenic |
| GTCGTCTTCGTCGGTTTCAA+TGG | 0.333982 | 3.2:+87711424 | MS.gene072843:CDS |
| TTTCTTTGCTTGTTTATGCT+TGG | 0.342405 | 3.2:+87711534 | MS.gene072843:CDS |
| TCGGTTTCAATGGCTTCTTC+TGG | 0.346131 | 3.2:+87711434 | MS.gene072843:CDS |
| AGGCTCTGTTTCAGTGTAGA+TGG | 0.358342 | 3.2:+87711125 | MS.gene072843:CDS |
| TCAGGACCTGAACCAGATTC+CGG | 0.382786 | 3.2:+87710882 | MS.gene072843:intron |
| AGATTGAAATGGAAGTTTAG+AGG | 0.395642 | 3.2:+87711170 | MS.gene072843:CDS |
| GAAGAGTTTGAGGAATTTGT+TGG | 0.398527 | 3.2:+87711346 | MS.gene072843:CDS |
| GCGCAACAGAATTTGAATTT+GGG | 0.399492 | 3.2:+87711368 | MS.gene072843:CDS |
| GCGAAGTAGAAACCGGAATC+TGG | 0.412140 | 3.2:-87710894 | None:intergenic |
| GTGGTGGAAGAGATCATTCC+AGG | 0.414862 | 3.2:+87711105 | MS.gene072843:CDS |
| ATTTGGGTGTTTATGAGTTA+GGG | 0.416856 | 3.2:+87711384 | MS.gene072843:CDS |
| GTTTATGAGTTAGGGAAAAT+GGG | 0.419124 | 3.2:+87711392 | MS.gene072843:CDS |
| ATGAATTGGTTGTTCCTGTT+GGG | 0.435531 | 3.2:+87711510 | MS.gene072843:CDS |
| TGATAACGAGATGACCCTTT+TGG | 0.440851 | 3.2:+87710926 | MS.gene072843:CDS |
| TAGAAACCGGAATCTGGTTC+AGG | 0.447124 | 3.2:-87710888 | None:intergenic |
| GACGGAAACAAGAAGGAAAA+GGG | 0.456534 | 3.2:-87710524 | None:intergenic |
| GATTGAAATGGAAGTTTAGA+GGG | 0.459604 | 3.2:+87711171 | MS.gene072843:CDS |
| TACAACACGAGAGCGAGATT+TGG | 0.461614 | 3.2:+87711053 | MS.gene072843:CDS |
| TAAGAGTTGGTCGTCTTCGT+CGG | 0.462413 | 3.2:+87711415 | MS.gene072843:CDS |
| TGTTTGAATCTCCAACCAAA+AGG | 0.465336 | 3.2:-87710941 | None:intergenic |
| GTTTCAATGGCTTCTTCTGG+TGG | 0.473192 | 3.2:+87711437 | MS.gene072843:CDS |
| AATGAGAGAGTTGAAATTGA+TGG | 0.474861 | 3.2:+87711194 | MS.gene072843:CDS |
| AATGAATTGGTTGTTCCTGT+TGG | 0.475517 | 3.2:+87711509 | MS.gene072843:CDS |
| GGACGGAAACAAGAAGGAAA+AGG | 0.479393 | 3.2:-87710525 | None:intergenic |
| TGCAGATTAAGAGATTGAAA+TGG | 0.481189 | 3.2:+87711159 | MS.gene072843:CDS |
| GTGTACCTGTTCAGATCTCA+TGG | 0.482867 | 3.2:+87711216 | MS.gene072843:CDS |
| TAGTGTTGAGGAGAATGAAT+TGG | 0.486282 | 3.2:+87711496 | MS.gene072843:CDS |
| TGACGGTTGTCGTCGGTTGT+TGG | 0.486808 | 3.2:-87710552 | None:intergenic |
| ATCTACACTGAAACAGAGCC+TGG | 0.491102 | 3.2:-87711123 | None:intergenic |
| ACATCCCATGAGATCTGAAC+AGG | 0.494374 | 3.2:-87711221 | None:intergenic |
| GAGGTAAAGAGAAGAGTTTG+AGG | 0.498910 | 3.2:+87711336 | MS.gene072843:CDS |
| ACAAGCAAAGAAAACCCAAC+AGG | 0.504820 | 3.2:-87711524 | None:intergenic |
| AACAACCGCGAAGTAGAAAC+CGG | 0.505210 | 3.2:-87710901 | None:intergenic |
| AACACGAGAGCGAGATTTGG+TGG | 0.511269 | 3.2:+87711056 | MS.gene072843:CDS |
| GTTTGAATCTCCAACCAAAA+GGG | 0.512706 | 3.2:-87710940 | None:intergenic |
| AGAGAGATTCAGATAGATTG+TGG | 0.525407 | 3.2:+87711086 | MS.gene072843:CDS |
| TTGTCGTCGGTTGTTGGAGA+GGG | 0.527307 | 3.2:-87710546 | None:intergenic |
| GAGATTCAGATAGATTGTGG+TGG | 0.561448 | 3.2:+87711089 | MS.gene072843:CDS |
| TAGGGAAAATGGGTAAGAGT+TGG | 0.575570 | 3.2:+87711402 | MS.gene072843:CDS |
| GTTGTCGTCGGTTGTTGGAG+AGG | 0.577727 | 3.2:-87710547 | None:intergenic |
| TTTGGAATGGTCTAGTGTTG+AGG | 0.588570 | 3.2:+87711484 | MS.gene072843:CDS |
| AGATTCCGGTTTCTACTTCG+CGG | 0.589210 | 3.2:+87710896 | MS.gene072843:CDS |
| CGTCGGTTGTTGGAGAGGGA+CGG | 0.604472 | 3.2:-87710542 | None:intergenic |
| GGAGAGGGACGGAAACAAGA+AGG | 0.612496 | 3.2:-87710531 | None:intergenic |
| TGGTGAATGACGGTTGTCGT+CGG | 0.618426 | 3.2:-87710559 | None:intergenic |
| TTGTGAAAGATAACAGTGAT+GGG | 0.630344 | 3.2:+87711258 | MS.gene072843:CDS |
| TTTGTGAAAGATAACAGTGA+TGG | 0.632305 | 3.2:+87711257 | MS.gene072843:CDS |
| ACACGAGAGCGAGATTTGGT+GGG | 0.635309 | 3.2:+87711057 | MS.gene072843:CDS |
| ACGGAAACAAGAAGGAAAAG+GGG | 0.654061 | 3.2:-87710523 | None:intergenic |
| TGTACCTGTTCAGATCTCAT+GGG | 0.704348 | 3.2:+87711217 | MS.gene072843:CDS |
| GAAGATGAAGATGAACAACA+AGG | 0.707918 | 3.2:+87711314 | MS.gene072843:CDS |
| GATGAAGATGAACAACAAGG+AGG | 0.746013 | 3.2:+87711317 | MS.gene072843:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGAAAATGAAAGGTTTGATA+TGG | - | chr3.2:87710788-87710807 | None:intergenic | 25.0% |
| ! | ATTCTTGTGTTCTTTACATT+TGG | - | chr3.2:87710985-87711004 | None:intergenic | 25.0% |
| !! | ACACAAGAATTTTCAGTATT+TGG | + | chr3.2:87710995-87711014 | MS.gene072843:CDS | 25.0% |
| !! | ATATCAAACCTTTCATTTTC+TGG | + | chr3.2:87710787-87710806 | MS.gene072843:intron | 25.0% |
| !!! | TGTTTTTTCCAGAAAATGAA+AGG | - | chr3.2:87710798-87710817 | None:intergenic | 25.0% |
| !!! | TTCATTTTCTGGAAAAAACA+CGG | + | chr3.2:87710798-87710817 | MS.gene072843:intron | 25.0% |
| AATGAGAGAGTTGAAATTGA+TGG | + | chr3.2:87711194-87711213 | MS.gene072843:CDS | 30.0% | |
| AATTTGGGTGTTTATGAGTT+AGG | + | chr3.2:87711383-87711402 | MS.gene072843:CDS | 30.0% | |
| AGATTGAAATGGAAGTTTAG+AGG | + | chr3.2:87711170-87711189 | MS.gene072843:CDS | 30.0% | |
| ATTTGGGTGTTTATGAGTTA+GGG | + | chr3.2:87711384-87711403 | MS.gene072843:CDS | 30.0% | |
| CTTCAAATATACACTTGTTC+TGG | + | chr3.2:87710835-87710854 | MS.gene072843:intron | 30.0% | |
| GATTGAAATGGAAGTTTAGA+GGG | + | chr3.2:87711171-87711190 | MS.gene072843:CDS | 30.0% | |
| GTTTATGAGTTAGGGAAAAT+GGG | + | chr3.2:87711392-87711411 | MS.gene072843:CDS | 30.0% | |
| TCTCATGGGATGTTTATAAT+TGG | + | chr3.2:87711231-87711250 | MS.gene072843:CDS | 30.0% | |
| TGCAGATTAAGAGATTGAAA+TGG | + | chr3.2:87711159-87711178 | MS.gene072843:CDS | 30.0% | |
| TGTTTATGAGTTAGGGAAAA+TGG | + | chr3.2:87711391-87711410 | MS.gene072843:CDS | 30.0% | |
| TTGTGAAAGATAACAGTGAT+GGG | + | chr3.2:87711258-87711277 | MS.gene072843:CDS | 30.0% | |
| TTTCTTTGCTTGTTTATGCT+TGG | + | chr3.2:87711534-87711553 | MS.gene072843:CDS | 30.0% | |
| TTTGTGAAAGATAACAGTGA+TGG | + | chr3.2:87711257-87711276 | MS.gene072843:CDS | 30.0% | |
| ! | TAGGTTTAGTTTCTTTGACT+TGG | + | chr3.2:87710649-87710668 | MS.gene072843:intron | 30.0% |
| !! | AACCTCTCTAAAGCTAAATT+CGG | + | chr3.2:87710858-87710877 | MS.gene072843:intron | 30.0% |
| AATGAATTGGTTGTTCCTGT+TGG | + | chr3.2:87711509-87711528 | MS.gene072843:CDS | 35.0% | |
| AGAAGAAGAAGAAGAAGGAT+TGG | - | chr3.2:87710742-87710761 | None:intergenic | 35.0% | |
| AGAGAGATTCAGATAGATTG+TGG | + | chr3.2:87711086-87711105 | MS.gene072843:CDS | 35.0% | |
| AGGTTTGATATGGAGATGAA+AGG | - | chr3.2:87710778-87710797 | None:intergenic | 35.0% | |
| ATGAATTGGTTGTTCCTGTT+GGG | + | chr3.2:87711510-87711529 | MS.gene072843:CDS | 35.0% | |
| CAAAGAAACTAAACCTACGT+TGG | - | chr3.2:87710646-87710665 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | chr3.2:87710747-87710766 | None:intergenic | 35.0% | |
| GAAGAGTTTGAGGAATTTGT+TGG | + | chr3.2:87711346-87711365 | MS.gene072843:CDS | 35.0% | |
| GAAGATGAAGATGAACAACA+AGG | + | chr3.2:87711314-87711333 | MS.gene072843:CDS | 35.0% | |
| GCGCAACAGAATTTGAATTT+GGG | + | chr3.2:87711368-87711387 | MS.gene072843:CDS | 35.0% | |
| GTTTGAATCTCCAACCAAAA+GGG | - | chr3.2:87710943-87710962 | None:intergenic | 35.0% | |
| TATCTTTACCAAACCAACGT+AGG | + | chr3.2:87710630-87710649 | MS.gene072843:intron | 35.0% | |
| TGTTTGAATCTCCAACCAAA+AGG | - | chr3.2:87710944-87710963 | None:intergenic | 35.0% | |
| TTTGATATGGAGATGAAAGG+AGG | - | chr3.2:87710775-87710794 | None:intergenic | 35.0% | |
| ! | AAACTAAACCTACGTTGGTT+TGG | - | chr3.2:87710641-87710660 | None:intergenic | 35.0% |
| ! | TAGTGTTGAGGAGAATGAAT+TGG | + | chr3.2:87711496-87711515 | MS.gene072843:CDS | 35.0% |
| !! | ACCTCTCTAAAGCTAAATTC+GGG | + | chr3.2:87710859-87710878 | MS.gene072843:intron | 35.0% |
| !! | TACGTTGGTTTGGTAAAGAT+AGG | - | chr3.2:87710631-87710650 | None:intergenic | 35.0% |
| !!! | CAAGTTCTTCTGTTTTGGAA+TGG | + | chr3.2:87711471-87711490 | MS.gene072843:CDS | 35.0% |
| AAAGATAGGTGGTGAGGTTA+GGG | - | chr3.2:87710617-87710636 | None:intergenic | 40.0% | |
| ACAAGCAAAGAAAACCCAAC+AGG | - | chr3.2:87711527-87711546 | None:intergenic | 40.0% | |
| ACGGAAACAAGAAGGAAAAG+GGG | - | chr3.2:87710526-87710545 | None:intergenic | 40.0% | |
| GACGGAAACAAGAAGGAAAA+GGG | - | chr3.2:87710527-87710546 | None:intergenic | 40.0% | |
| GAGATTCAGATAGATTGTGG+TGG | + | chr3.2:87711089-87711108 | MS.gene072843:CDS | 40.0% | |
| GAGGTAAAGAGAAGAGTTTG+AGG | + | chr3.2:87711336-87711355 | MS.gene072843:CDS | 40.0% | |
| GATGAAGATGAACAACAAGG+AGG | + | chr3.2:87711317-87711336 | MS.gene072843:CDS | 40.0% | |
| GGCGCAACAGAATTTGAATT+TGG | + | chr3.2:87711367-87711386 | MS.gene072843:CDS | 40.0% | |
| TAAAGATAGGTGGTGAGGTT+AGG | - | chr3.2:87710618-87710637 | None:intergenic | 40.0% | |
| TAGGGAAAATGGGTAAGAGT+TGG | + | chr3.2:87711402-87711421 | MS.gene072843:CDS | 40.0% | |
| TGTACCTGTTCAGATCTCAT+GGG | + | chr3.2:87711217-87711236 | MS.gene072843:CDS | 40.0% | |
| TTTGGTAAAGATAGGTGGTG+AGG | - | chr3.2:87710623-87710642 | None:intergenic | 40.0% | |
| ! | GAAGAAGAAGAAGGATTGGT+TGG | - | chr3.2:87710738-87710757 | None:intergenic | 40.0% |
| ! | TCTAAAGCTAAATTCGGGTC+AGG | + | chr3.2:87710864-87710883 | MS.gene072843:intron | 40.0% |
| ! | TTTGGAATGGTCTAGTGTTG+AGG | + | chr3.2:87711484-87711503 | MS.gene072843:CDS | 40.0% |
| !! | ACCCGAATTTAGCTTTAGAG+AGG | - | chr3.2:87710863-87710882 | None:intergenic | 40.0% |
| !! | GTTGGTTTGGTAAAGATAGG+TGG | - | chr3.2:87710628-87710647 | None:intergenic | 40.0% |
| !! | TGATAACGAGATGACCCTTT+TGG | + | chr3.2:87710926-87710945 | MS.gene072843:CDS | 40.0% |
| AACAACCGCGAAGTAGAAAC+CGG | - | chr3.2:87710904-87710923 | None:intergenic | 45.0% | |
| ACATCCCATGAGATCTGAAC+AGG | - | chr3.2:87711224-87711243 | None:intergenic | 45.0% | |
| ACTTGGTCACGTTCCATTCT+TGG | + | chr3.2:87710666-87710685 | MS.gene072843:intron | 45.0% | |
| AGATTCCGGTTTCTACTTCG+CGG | + | chr3.2:87710896-87710915 | MS.gene072843:CDS | 45.0% | |
| AGGCTCTGTTTCAGTGTAGA+TGG | + | chr3.2:87711125-87711144 | MS.gene072843:CDS | 45.0% | |
| ATCTACACTGAAACAGAGCC+TGG | - | chr3.2:87711126-87711145 | None:intergenic | 45.0% | |
| GGACGGAAACAAGAAGGAAA+AGG | - | chr3.2:87710528-87710547 | None:intergenic | 45.0% | |
| GTGAAGAGAACGACCAAGAA+TGG | - | chr3.2:87710682-87710701 | None:intergenic | 45.0% | |
| GTGTACCTGTTCAGATCTCA+TGG | + | chr3.2:87711216-87711235 | MS.gene072843:CDS | 45.0% | |
| GTTTCAATGGCTTCTTCTGG+TGG | + | chr3.2:87711437-87711456 | MS.gene072843:CDS | 45.0% | |
| TACAACACGAGAGCGAGATT+TGG | + | chr3.2:87711053-87711072 | MS.gene072843:CDS | 45.0% | |
| TCGGTTTCAATGGCTTCTTC+TGG | + | chr3.2:87711434-87711453 | MS.gene072843:CDS | 45.0% | |
| ! | AACGAGATGACCCTTTTGGT+TGG | + | chr3.2:87710930-87710949 | MS.gene072843:CDS | 45.0% |
| ! | ATGGGTGGTGATGAAGTTGA+AGG | - | chr3.2:87710704-87710723 | None:intergenic | 45.0% |
| ! | TAAGAGTTGGTCGTCTTCGT+CGG | + | chr3.2:87711415-87711434 | MS.gene072843:CDS | 45.0% |
| ! | TAGAAACCGGAATCTGGTTC+AGG | - | chr3.2:87710891-87710910 | None:intergenic | 45.0% |
| ! | TGGCGCAAGTTCTTCTGTTT+TGG | + | chr3.2:87711466-87711485 | MS.gene072843:CDS | 45.0% |
| !! | GAAGAAGAAGGATTGGTTGG+TGG | - | chr3.2:87710735-87710754 | None:intergenic | 45.0% |
| !! | GCTTCTTCTGGTGGATCTTT+TGG | + | chr3.2:87711446-87711465 | MS.gene072843:CDS | 45.0% |
| !! | TGGTTGGTGGTGAATCGAAT+GGG | - | chr3.2:87710722-87710741 | None:intergenic | 45.0% |
| !! | TTGGTTGGTGGTGAATCGAA+TGG | - | chr3.2:87710723-87710742 | None:intergenic | 45.0% |
| AACACGAGAGCGAGATTTGG+TGG | + | chr3.2:87711056-87711075 | MS.gene072843:CDS | 50.0% | |
| ATAGGTGGTGAGGTTAGGGT+TGG | - | chr3.2:87710613-87710632 | None:intergenic | 50.0% | |
| GCGAAGTAGAAACCGGAATC+TGG | - | chr3.2:87710897-87710916 | None:intergenic | 50.0% | |
| TCAGGACCTGAACCAGATTC+CGG | + | chr3.2:87710882-87710901 | MS.gene072843:intron | 50.0% | |
| TGGTGAATGACGGTTGTCGT+CGG | - | chr3.2:87710562-87710581 | None:intergenic | 50.0% | |
| ! | ACACGAGAGCGAGATTTGGT+GGG | + | chr3.2:87711057-87711076 | MS.gene072843:CDS | 50.0% |
| ! | GTGGTGGAAGAGATCATTCC+AGG | + | chr3.2:87711105-87711124 | MS.gene072843:CDS | 50.0% |
| ! | TTGTCGTCGGTTGTTGGAGA+GGG | - | chr3.2:87710549-87710568 | None:intergenic | 50.0% |
| !! | AGGTTAGGGTTGGTGGAATG+TGG | - | chr3.2:87710603-87710622 | None:intergenic | 50.0% |
| !! | GTCGTCTTCGTCGGTTTCAA+TGG | + | chr3.2:87711424-87711443 | MS.gene072843:CDS | 50.0% |
| !! | TTAGGGTTGGTGGAATGTGG+CGG | - | chr3.2:87710600-87710619 | None:intergenic | 50.0% |
| !! | TTGGTGGTGAATCGAATGGG+TGG | - | chr3.2:87710719-87710738 | None:intergenic | 50.0% |
| GGAGAGGGACGGAAACAAGA+AGG | - | chr3.2:87710534-87710553 | None:intergenic | 55.0% | |
| ! | GTTGTCGTCGGTTGTTGGAG+AGG | - | chr3.2:87710550-87710569 | None:intergenic | 55.0% |
| ! | TGACGGTTGTCGTCGGTTGT+TGG | - | chr3.2:87710555-87710574 | None:intergenic | 55.0% |
| !! | GTGGTGGTGGTGGTGAATGA+CGG | - | chr3.2:87710572-87710591 | None:intergenic | 55.0% |
| GGTGGTGAGGTTAGGGTTGG+TGG | - | chr3.2:87710610-87710629 | None:intergenic | 60.0% | |
| ! | CGTCGGTTGTTGGAGAGGGA+CGG | - | chr3.2:87710545-87710564 | None:intergenic | 60.0% |
| ! | TTGGTGGAATGTGGCGGAGG+CGG | - | chr3.2:87710594-87710613 | None:intergenic | 60.0% |
| !! | GGGTTGGTGGAATGTGGCGG+AGG | - | chr3.2:87710597-87710616 | None:intergenic | 65.0% |
| ! | GAATGTGGCGGAGGCGGTGG+TGG | - | chr3.2:87710588-87710607 | None:intergenic | 70.0% |
| ! | GTGGAATGTGGCGGAGGCGG+TGG | - | chr3.2:87710591-87710610 | None:intergenic | 70.0% |
| ! | TGTGGCGGAGGCGGTGGTGG+TGG | - | chr3.2:87710585-87710604 | None:intergenic | 75.0% |
| !!! | GGCGGAGGCGGTGGTGGTGG+TGG | - | chr3.2:87710582-87710601 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 87710513 | 87711565 | 87710513 | ID=MS.gene072843 |
| chr3.2 | mRNA | 87710513 | 87711565 | 87710513 | ID=MS.gene072843.t1;Parent=MS.gene072843 |
| chr3.2 | exon | 87710513 | 87710570 | 87710513 | ID=MS.gene072843.t1.exon1;Parent=MS.gene072843.t1 |
| chr3.2 | CDS | 87710513 | 87710570 | 87710513 | ID=cds.MS.gene072843.t1;Parent=MS.gene072843.t1 |
| chr3.2 | exon | 87710886 | 87711565 | 87710886 | ID=MS.gene072843.t1.exon2;Parent=MS.gene072843.t1 |
| chr3.2 | CDS | 87710886 | 87711565 | 87710886 | ID=cds.MS.gene072843.t1;Parent=MS.gene072843.t1 |
| Gene Sequence |
| Protein sequence |
