AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054617


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054617.t1 MTR_3g101290 87.117 163 3 4 3 165 71 215 4.44e-95 275
MS.gene054617.t1 MTR_4g094982 41.627 209 71 6 3 165 39 242 4.13e-37 129
MS.gene054617.t1 MTR_5g016510 80.597 67 13 0 3 69 39 105 2.25e-35 125
MS.gene054617.t1 MTR_4g019370 54.545 110 42 1 3 112 72 173 4.35e-34 123
MS.gene054617.t1 MTR_5g082910 79.688 64 13 0 3 66 53 116 7.44e-33 118
MS.gene054617.t1 MTR_6g015455 74.627 67 17 0 3 69 39 105 5.03e-31 118
MS.gene054617.t1 MTR_4g082040 62.687 67 25 0 3 69 139 205 8.14e-25 99.4
MS.gene054617.t1 MTR_5g041570 61.194 67 26 0 3 69 168 234 1.22e-24 99.0
MS.gene054617.t1 MTR_6g074860 60.606 66 26 0 3 68 38 103 7.13e-24 94.0
MS.gene054617.t1 MTR_7g086960 62.687 67 25 0 3 69 123 189 7.63e-24 95.9
MS.gene054617.t1 MTR_3g089045 62.687 67 25 0 3 69 50 116 1.50e-23 94.4
MS.gene054617.t1 MTR_1g062940 50.685 73 36 0 3 75 43 115 5.22e-23 91.3
MS.gene054617.t1 MTR_0008s0390 59.701 67 27 0 4 70 51 117 5.83e-23 92.4
MS.gene054617.t1 MTR_3g052430 55.714 70 31 0 4 73 79 148 1.65e-22 93.6
MS.gene054617.t1 MTR_5g042030 59.091 66 27 0 4 69 45 110 2.22e-22 90.9
MS.gene054617.t1 MTR_8g031360 54.167 72 33 0 1 72 49 120 2.40e-22 91.3
MS.gene054617.t1 MTR_3g052450 57.576 66 28 0 4 69 78 143 2.40e-22 93.2
MS.gene054617.t1 MTR_3g110028 38.679 106 65 0 4 109 120 225 2.94e-22 93.2
MS.gene054617.t1 MTR_3g461490 59.091 66 27 0 4 69 50 115 3.05e-22 91.3
MS.gene054617.t1 MTR_2g097910 60.606 66 26 0 4 69 58 123 3.30e-22 91.3
MS.gene054617.t1 MTR_0008s0470 58.209 67 28 0 4 70 51 117 3.73e-22 90.5
MS.gene054617.t1 MTR_1g100667 55.072 69 31 0 3 71 50 118 5.64e-22 89.7
MS.gene054617.t1 MTR_1g100653 55.714 70 31 0 1 70 47 116 6.71e-22 89.7
MS.gene054617.t1 MTR_1g112760 59.091 66 27 0 4 69 51 116 9.55e-22 88.2
MS.gene054617.t1 MTR_4g065017 60.606 66 26 0 4 69 55 120 1.05e-21 89.7
MS.gene054617.t1 MTR_3g028740 62.121 66 25 0 4 69 60 125 1.12e-21 90.1
MS.gene054617.t1 MTR_7g011170 59.091 66 27 0 4 69 50 115 1.43e-21 89.4
MS.gene054617.t1 MTR_7g076740 55.072 69 31 0 1 69 48 116 1.55e-21 89.0
MS.gene054617.t1 MTR_2g089420 53.247 77 34 1 4 78 49 125 1.78e-21 90.5
MS.gene054617.t1 MTR_6g027370 52.239 67 32 0 3 69 133 199 1.80e-21 89.4
MS.gene054617.t1 MTR_0251s0050 56.716 67 29 0 4 70 51 117 2.03e-21 88.2
MS.gene054617.t1 MTR_1g017000 52.857 70 33 0 4 73 51 120 2.44e-21 87.4
MS.gene054617.t1 MTR_8g095390 56.061 66 29 0 4 69 50 115 3.28e-21 88.2
MS.gene054617.t1 MTR_3g077110 59.091 66 27 0 4 69 50 115 3.93e-21 88.6
MS.gene054617.t1 MTR_0063s0090 53.731 67 31 0 1 67 47 113 4.55e-21 86.3
MS.gene054617.t1 MTR_1g045610 52.941 68 32 0 3 70 58 125 6.64e-21 86.7
MS.gene054617.t1 MTR_4g105130 59.091 66 27 0 4 69 50 115 8.41e-21 87.8
MS.gene054617.t1 MTR_4g082290 59.091 66 27 0 4 69 50 115 8.51e-21 88.2
MS.gene054617.t1 MTR_8g017540 57.971 69 29 0 4 72 96 164 8.85e-21 88.2
MS.gene054617.t1 MTR_4g082230 59.091 66 27 0 4 69 50 115 9.99e-21 87.8
MS.gene054617.t1 MTR_7g037260 50.000 74 37 0 4 77 180 253 1.00e-20 87.4
MS.gene054617.t1 MTR_2g089450 55.385 65 29 0 4 68 50 114 1.13e-20 85.9
MS.gene054617.t1 MTR_1g073170 52.239 67 32 0 3 69 57 123 1.29e-20 85.9
MS.gene054617.t1 MTR_1g043080 53.623 69 32 0 1 69 47 115 1.31e-20 85.9
MS.gene054617.t1 MTR_1g085040 60.606 66 26 0 4 69 50 115 1.32e-20 87.4
MS.gene054617.t1 MTR_5g079670 57.576 66 28 0 4 69 49 114 1.56e-20 84.7
MS.gene054617.t1 MTR_3g077650 48.649 74 38 0 4 77 216 289 2.22e-20 87.4
MS.gene054617.t1 MTR_6g012690 57.576 66 28 0 4 69 50 115 2.68e-20 86.3
MS.gene054617.t1 MTR_4g091490 54.545 66 30 0 4 69 51 116 2.75e-20 86.3
MS.gene054617.t1 MTR_8g017440 59.091 66 27 0 4 69 50 115 2.78e-20 86.3
MS.gene054617.t1 MTR_3g097450 52.174 69 33 0 1 69 47 115 2.85e-20 85.5
MS.gene054617.t1 MTR_5g078140 30.994 171 108 3 1 161 47 217 2.85e-20 85.9
MS.gene054617.t1 MTR_4g057635 53.030 66 31 0 4 69 51 116 3.47e-20 85.9
MS.gene054617.t1 MTR_3g065440 52.174 69 33 0 1 69 47 115 3.83e-20 85.5
MS.gene054617.t1 MTR_5g014990 53.030 66 31 0 4 69 51 116 4.27e-20 85.1
MS.gene054617.t1 MTR_2g034790 52.778 72 34 0 1 72 47 118 4.77e-20 85.5
MS.gene054617.t1 MTR_3g011610 43.689 103 45 2 4 95 75 175 6.45e-20 86.3
MS.gene054617.t1 MTR_2g011660 54.545 66 30 0 4 69 51 116 6.49e-20 85.1
MS.gene054617.t1 MTR_5g070020 51.515 66 32 0 4 69 157 222 6.66e-20 85.1
MS.gene054617.t1 MTR_2g064160 56.061 66 29 0 4 69 49 114 7.47e-20 84.7
MS.gene054617.t1 MTR_3g045430 54.545 66 30 0 4 69 51 116 8.15e-20 84.3
MS.gene054617.t1 MTR_4g121460 52.778 72 34 0 1 72 47 118 8.31e-20 84.7
MS.gene054617.t1 MTR_1g026870 45.333 75 41 0 4 78 120 194 8.38e-20 85.9
MS.gene054617.t1 MTR_8g042410 49.315 73 37 0 1 73 72 144 8.77e-20 85.9
MS.gene054617.t1 MTR_4g073420 50.725 69 34 0 1 69 47 115 9.09e-20 84.0
MS.gene054617.t1 MTR_6g009430 53.030 66 31 0 4 69 50 115 9.90e-20 84.7
MS.gene054617.t1 MTR_1g085640 57.576 66 28 0 4 69 50 115 1.09e-19 85.1
MS.gene054617.t1 MTR_2g099740 59.091 66 27 0 4 69 50 115 1.14e-19 85.1
MS.gene054617.t1 MTR_2g089620 53.030 66 31 0 4 69 50 115 1.40e-19 84.0
MS.gene054617.t1 MTR_7g096930 52.174 69 33 0 1 69 47 115 1.43e-19 83.2
MS.gene054617.t1 MTR_8g017340 57.576 66 28 0 4 69 51 116 1.60e-19 85.1
MS.gene054617.t1 MTR_7g102110 54.545 66 30 0 4 69 51 116 1.63e-19 83.2
MS.gene054617.t1 MTR_3g074520 53.030 66 31 0 4 69 50 115 1.69e-19 84.0
MS.gene054617.t1 MTR_4g478180 54.545 66 30 0 4 69 51 116 1.76e-19 84.0
MS.gene054617.t1 MTR_4g063100 47.761 67 35 0 3 69 15 81 1.79e-19 82.0
MS.gene054617.t1 MTR_4g105660 51.515 66 32 0 4 69 215 280 1.89e-19 84.7
MS.gene054617.t1 MTR_7g115650 48.571 70 36 0 1 70 47 116 1.92e-19 81.6
MS.gene054617.t1 MTR_1g076150 53.030 66 31 0 4 69 50 115 2.13e-19 82.4
MS.gene054617.t1 MTR_7g451170 35.714 112 64 1 4 115 226 329 2.16e-19 84.3
MS.gene054617.t1 MTR_4g063100 47.761 67 35 0 3 69 44 110 2.38e-19 82.4
MS.gene054617.t1 MTR_7g061330 51.515 66 32 0 4 69 148 213 2.57e-19 84.3
MS.gene054617.t1 MTR_7g461410 51.515 66 32 0 4 69 148 213 2.57e-19 84.3
MS.gene054617.t1 MTR_7g110830 56.061 66 29 0 4 69 50 115 2.81e-19 83.6
MS.gene054617.t1 MTR_8g017350 56.061 66 29 0 4 69 51 116 2.96e-19 84.3
MS.gene054617.t1 MTR_7g061330 51.515 66 32 0 4 69 112 177 3.25e-19 84.0
MS.gene054617.t1 MTR_8g017390 57.576 66 28 0 4 69 51 116 3.51e-19 84.0
MS.gene054617.t1 MTR_4g485530 52.174 69 33 0 1 69 47 115 3.71e-19 80.5
MS.gene054617.t1 MTR_4g100720 52.941 68 32 0 4 71 51 118 4.07e-19 80.1
MS.gene054617.t1 MTR_3g103570 51.515 66 32 0 4 69 51 116 4.23e-19 82.8
MS.gene054617.t1 MTR_5g007370 54.545 66 30 0 4 69 50 115 4.72e-19 82.4
MS.gene054617.t1 MTR_6g055910 49.254 67 34 0 3 69 22 88 4.80e-19 81.6
MS.gene054617.t1 MTR_1g017140 53.030 66 31 0 4 69 51 116 4.87e-19 82.8
MS.gene054617.t1 MTR_4g102380 51.515 66 32 0 4 69 50 115 5.64e-19 81.6
MS.gene054617.t1 MTR_6g090405 51.429 70 34 0 4 73 51 120 8.29e-19 80.9
MS.gene054617.t1 MTR_0008s0280 42.466 73 42 0 4 76 50 122 8.35e-19 80.5
MS.gene054617.t1 MTR_8g098860 54.545 66 30 0 4 69 50 115 8.48e-19 82.0
MS.gene054617.t1 MTR_6g027360 47.761 67 35 0 3 69 112 178 8.72e-19 81.6
MS.gene054617.t1 MTR_8g017500 57.576 66 28 0 4 69 50 115 9.65e-19 82.0
MS.gene054617.t1 MTR_6g027340 46.269 67 36 0 3 69 50 116 1.03e-18 79.7
MS.gene054617.t1 MTR_6g055910 49.254 67 34 0 3 69 51 117 1.06e-18 81.3
MS.gene054617.t1 MTR_5g029840 48.485 66 34 0 4 69 50 115 1.25e-18 81.6
MS.gene054617.t1 MTR_8g027345 49.275 69 35 0 1 69 47 115 1.53e-18 80.9
MS.gene054617.t1 MTR_7g117730 49.275 69 35 0 1 69 47 115 1.74e-18 80.1
MS.gene054617.t1 MTR_2g095520 55.738 61 27 0 4 64 51 111 1.83e-18 80.9
MS.gene054617.t1 MTR_1g043050 50.725 69 34 0 1 69 47 115 1.87e-18 80.1
MS.gene054617.t1 MTR_5g049190 37.234 94 56 1 4 97 54 144 2.51e-18 79.3
MS.gene054617.t1 MTR_7g111290 60.000 60 24 0 4 63 8 67 2.53e-18 80.9
MS.gene054617.t1 MTR_1g110460 47.059 68 36 0 3 70 63 130 3.08e-18 80.1
MS.gene054617.t1 MTR_4g125520 52.239 67 32 0 4 70 50 116 3.28e-18 80.1
MS.gene054617.t1 MTR_3g463400 49.254 67 34 0 3 69 167 233 3.38e-18 81.3
MS.gene054617.t1 MTR_7g035075 50.000 66 33 0 3 68 51 116 3.97e-18 78.2
MS.gene054617.t1 MTR_8g020490 50.000 66 33 0 4 69 46 111 5.01e-18 79.0
MS.gene054617.t1 MTR_0140s0030 50.725 69 34 0 1 69 48 116 5.17e-18 79.7
MS.gene054617.t1 MTR_0489s0020 50.725 69 34 0 1 69 48 116 5.17e-18 79.7
MS.gene054617.t1 MTR_7g111290 60.000 60 24 0 4 63 50 109 5.47e-18 80.1
MS.gene054617.t1 MTR_2g096380 44.118 68 38 0 3 70 24 91 7.26e-18 77.8
MS.gene054617.t1 MTR_8g006470 52.174 69 32 1 3 70 47 115 8.31e-18 78.6
MS.gene054617.t1 MTR_1g021230 51.515 66 32 0 4 69 95 160 8.49e-18 80.1
MS.gene054617.t1 MTR_2g096380 44.118 68 38 0 3 70 43 110 8.73e-18 77.8
MS.gene054617.t1 MTR_7g450950 40.000 85 48 1 2 83 190 274 1.56e-17 78.6
MS.gene054617.t1 MTR_2g067420 54.098 61 28 0 4 64 52 112 1.59e-17 78.6
MS.gene054617.t1 MTR_2g088170 52.055 73 35 0 1 73 64 136 1.60e-17 79.3
MS.gene054617.t1 MTR_5g010020 57.377 61 26 0 4 64 50 110 1.80e-17 78.6
MS.gene054617.t1 MTR_3g039990 49.275 69 35 0 1 69 48 116 1.95e-17 78.2
MS.gene054617.t1 MTR_7g010210 51.515 66 32 0 4 69 50 115 1.96e-17 78.2
MS.gene054617.t1 MTR_4g097570 55.000 60 27 0 4 63 51 110 1.97e-17 77.8
MS.gene054617.t1 MTR_4g097570 55.000 60 27 0 4 63 52 111 1.99e-17 77.8
MS.gene054617.t1 MTR_7g010210 52.308 65 31 0 5 69 51 115 2.01e-17 77.4
MS.gene054617.t1 MTR_5g088610 39.623 106 53 4 4 108 47 142 2.90e-17 77.8
MS.gene054617.t1 MTR_4g128670 52.459 61 29 0 4 64 51 111 3.17e-17 77.8
MS.gene054617.t1 MTR_7g017260 50.000 66 33 0 5 70 66 131 3.86e-17 76.6
MS.gene054617.t1 MTR_1g086510 48.529 68 35 0 3 70 58 125 3.89e-17 76.6
MS.gene054617.t1 MTR_1g086530 48.529 68 35 0 3 70 70 137 4.26e-17 76.6
MS.gene054617.t1 MTR_6g006030 48.485 66 34 0 3 68 51 116 5.39e-17 75.1
MS.gene054617.t1 MTR_5g079220 50.769 65 32 0 5 69 60 124 6.01e-17 76.3
MS.gene054617.t1 MTR_4g029540 53.731 67 30 1 3 68 47 113 6.23e-17 76.6
MS.gene054617.t1 MTR_4g088015 47.692 65 34 0 4 68 256 320 6.33e-17 77.4
MS.gene054617.t1 MTR_7g035350 53.226 62 29 0 4 65 260 321 7.30e-17 77.4
MS.gene054617.t1 MTR_0197s0010 50.769 65 32 0 5 69 40 104 1.09e-16 74.7
MS.gene054617.t1 MTR_3g083540 46.377 69 37 0 1 69 76 144 1.26e-16 75.9
MS.gene054617.t1 MTR_6g012180 51.562 64 31 0 1 64 47 110 1.32e-16 75.9
MS.gene054617.t1 MTR_1g057980 51.613 62 30 0 3 64 114 175 1.40e-16 75.5
MS.gene054617.t1 MTR_5g078800 48.485 66 34 0 5 70 46 111 2.25e-16 74.7
MS.gene054617.t1 MTR_0247s0040 52.381 63 30 0 5 67 46 108 3.32e-16 72.4
MS.gene054617.t1 MTR_7g087130 50.769 65 32 0 5 69 51 115 3.33e-16 74.7
MS.gene054617.t1 MTR_5g062790 47.143 70 33 2 4 69 47 116 4.55e-16 74.3
MS.gene054617.t1 MTR_5g088080 43.662 71 39 1 4 73 50 120 5.16e-16 73.6
MS.gene054617.t1 MTR_5g088150 43.662 71 39 1 4 73 50 120 5.16e-16 73.6
MS.gene054617.t1 MTR_5g488210 43.662 71 39 1 4 73 50 120 5.16e-16 73.6
MS.gene054617.t1 MTR_5g088640 43.662 71 39 1 4 73 50 120 6.34e-16 73.6
MS.gene054617.t1 MTR_0001s0360 48.485 66 34 0 5 70 46 111 6.48e-16 73.2
MS.gene054617.t1 MTR_1g083630 42.857 70 40 0 4 73 50 119 7.10e-16 74.7
MS.gene054617.t1 MTR_5g488170 42.466 73 41 1 4 75 50 122 7.91e-16 72.8
MS.gene054617.t1 MTR_5g078930 52.308 65 31 0 5 69 48 112 7.94e-16 72.4
MS.gene054617.t1 MTR_5g079290 46.154 65 35 0 5 69 56 120 8.57e-16 72.8
MS.gene054617.t1 MTR_0193s0090 47.143 70 37 0 5 74 46 115 9.00e-16 72.0
MS.gene054617.t1 MTR_7g037130 43.243 74 42 0 4 77 180 253 1.18e-15 73.6
MS.gene054617.t1 MTR_8g060940 53.226 62 29 0 5 66 46 107 1.18e-15 72.4
MS.gene054617.t1 MTR_5g078860 45.455 66 36 0 5 70 46 111 1.87e-15 72.4
MS.gene054617.t1 MTR_5g078910 46.970 66 35 0 5 70 46 111 2.16e-15 72.4
MS.gene054617.t1 MTR_5g010650 52.459 61 27 2 4 63 145 204 2.52e-15 72.8
MS.gene054617.t1 MTR_5g079120 46.970 66 35 0 5 70 100 165 2.74e-15 72.0
MS.gene054617.t1 MTR_5g078950 49.206 63 32 0 5 67 46 108 4.61e-15 70.9
MS.gene054617.t1 MTR_2g033170 47.059 68 36 0 3 70 61 128 5.05e-15 71.6
MS.gene054617.t1 MTR_7g109320 52.857 70 33 0 1 70 47 116 1.21e-14 70.5
MS.gene054617.t1 MTR_4g128190 43.939 66 36 1 4 68 36 101 2.86e-14 68.6
MS.gene054617.t1 MTR_4g123040 45.588 68 37 0 3 70 61 128 3.26e-13 66.2
MS.gene054617.t1 MTR_1g008970 43.860 57 32 0 4 60 126 182 2.21e-11 60.8
MS.gene054617.t1 MTR_6g055910 47.826 46 24 0 24 69 2 47 4.69e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054617.t1 AT5G67300 79.487 78 16 0 3 80 40 117 2.40e-38 133
MS.gene054617.t1 AT3G50060 78.947 76 14 1 3 78 40 113 2.57e-37 130
MS.gene054617.t1 AT4G37260 82.090 67 12 0 3 69 47 113 3.75e-35 125
MS.gene054617.t1 AT2G23290 66.667 93 29 1 3 95 47 137 5.31e-35 124
MS.gene054617.t1 AT3G55730 70.149 67 20 0 3 69 90 156 7.35e-30 112
MS.gene054617.t1 AT3G09230 70.149 67 20 0 3 69 89 155 9.27e-29 109
MS.gene054617.t1 AT2G39880 64.179 67 24 0 3 69 84 150 9.74e-28 106
MS.gene054617.t1 AT1G17950 59.701 67 27 0 3 69 39 105 6.90e-25 97.1
MS.gene054617.t1 AT5G17800 60.294 68 27 0 3 70 127 194 2.14e-24 97.1
MS.gene054617.t1 AT1G26780 59.701 67 27 0 3 69 132 198 2.18e-24 96.3
MS.gene054617.t1 AT1G69560 59.701 67 27 0 3 69 141 207 2.24e-24 97.1
MS.gene054617.t1 AT4G33450 61.194 67 26 0 3 69 53 119 2.32e-24 95.5
MS.gene054617.t1 AT1G69560 59.701 67 27 0 3 69 157 223 2.62e-24 97.1
MS.gene054617.t1 AT1G26780 59.701 67 27 0 3 69 132 198 3.87e-24 97.1
MS.gene054617.t1 AT1G73410 60.870 69 27 0 2 70 39 107 9.41e-24 92.8
MS.gene054617.t1 AT3G29020 56.716 67 29 0 3 69 99 165 1.23e-23 93.2
MS.gene054617.t1 AT1G73410 61.765 68 26 0 3 70 40 107 1.25e-23 93.6
MS.gene054617.t1 AT3G29020 56.716 67 29 0 3 69 101 167 4.05e-23 93.2
MS.gene054617.t1 AT1G74430 56.000 75 30 1 4 78 50 121 5.47e-23 92.4
MS.gene054617.t1 AT5G40330 51.852 81 35 1 4 80 50 130 7.05e-23 90.9
MS.gene054617.t1 AT5G14750 52.778 72 34 0 1 72 17 88 1.72e-22 88.6
MS.gene054617.t1 AT1G79180 33.117 154 98 2 1 153 49 198 3.95e-22 90.5
MS.gene054617.t1 AT5G14750 55.072 69 31 0 4 72 54 122 4.48e-22 88.6
MS.gene054617.t1 AT5G60890 59.091 66 27 0 4 69 50 115 4.54e-22 90.5
MS.gene054617.t1 AT1G79180 33.117 154 98 2 1 153 82 231 6.26e-22 90.5
MS.gene054617.t1 AT3G28470 63.934 61 22 0 4 64 50 110 1.10e-21 89.7
MS.gene054617.t1 AT5G61420 57.576 66 28 0 4 69 50 115 1.35e-21 90.1
MS.gene054617.t1 AT3G61250 55.072 69 31 0 1 69 47 115 2.16e-21 88.6
MS.gene054617.t1 AT5G07700 57.576 66 28 0 4 69 50 115 2.50e-21 89.0
MS.gene054617.t1 AT5G07700 57.576 66 28 0 4 69 50 115 2.50e-21 89.0
MS.gene054617.t1 AT5G12870 59.091 66 27 0 4 69 56 121 3.16e-21 87.8
MS.gene054617.t1 AT3G53200 52.239 67 32 0 3 69 13 79 3.74e-21 86.3
MS.gene054617.t1 AT5G06100 54.286 70 32 0 4 73 70 139 3.94e-21 89.4
MS.gene054617.t1 AT1G18710 57.576 66 28 0 4 69 50 115 4.39e-21 87.4
MS.gene054617.t1 AT3G11440 52.857 70 33 0 4 73 79 148 4.44e-21 89.4
MS.gene054617.t1 AT5G06100 54.286 70 32 0 4 73 70 139 4.50e-21 89.4
MS.gene054617.t1 AT5G06100 54.286 70 32 0 4 73 70 139 4.50e-21 89.4
MS.gene054617.t1 AT5G06100 54.286 70 32 0 4 73 70 139 4.50e-21 89.4
MS.gene054617.t1 AT5G06100 54.286 70 32 0 4 73 70 139 4.50e-21 89.4
MS.gene054617.t1 AT3G11440 52.857 70 33 0 4 73 79 148 4.83e-21 89.4
MS.gene054617.t1 AT3G11440 52.857 70 33 0 4 73 79 148 4.83e-21 89.4
MS.gene054617.t1 AT3G11440 52.857 70 33 0 4 73 79 148 4.83e-21 89.4
MS.gene054617.t1 AT1G18570 54.545 66 30 0 4 69 51 116 5.14e-21 88.2
MS.gene054617.t1 AT4G28110 56.061 66 29 0 4 69 50 115 5.24e-21 87.4
MS.gene054617.t1 AT3G08500 56.522 69 30 0 1 69 65 133 6.26e-21 88.2
MS.gene054617.t1 AT3G53200 52.239 67 32 0 3 69 46 112 7.49e-21 86.3
MS.gene054617.t1 AT2G31180 45.556 90 46 1 1 90 47 133 7.52e-21 86.3
MS.gene054617.t1 AT1G16490 42.157 102 57 1 4 103 52 153 7.82e-21 86.7
MS.gene054617.t1 AT5G15310 57.576 66 28 0 4 69 50 115 8.31e-21 87.4
MS.gene054617.t1 AT3G27920 56.061 66 29 0 4 69 52 117 9.19e-21 85.5
MS.gene054617.t1 AT3G01140 57.576 66 28 0 4 69 50 115 9.40e-21 87.4
MS.gene054617.t1 AT5G15310 57.576 66 28 0 4 69 50 115 9.54e-21 87.4
MS.gene054617.t1 AT5G65230 56.061 66 29 0 4 69 50 115 9.81e-21 87.0
MS.gene054617.t1 AT3G12820 53.623 69 32 0 1 69 1 69 1.09e-20 84.7
MS.gene054617.t1 AT3G01140 57.576 66 28 0 4 69 93 158 1.20e-20 87.8
MS.gene054617.t1 AT2G32460 50.685 73 36 0 1 73 53 125 1.20e-20 88.2
MS.gene054617.t1 AT5G15310 57.576 66 28 0 4 69 50 115 1.22e-20 85.9
MS.gene054617.t1 AT2G32460 50.685 73 36 0 1 73 41 113 1.23e-20 88.2
MS.gene054617.t1 AT5G02320 35.616 146 83 4 4 145 102 240 1.42e-20 88.2
MS.gene054617.t1 AT5G54230 56.061 66 29 0 4 69 50 115 1.50e-20 86.7
MS.gene054617.t1 AT5G07690 55.385 65 29 0 4 68 50 114 1.52e-20 87.0
MS.gene054617.t1 AT1G74080 49.333 75 35 1 4 78 50 121 1.68e-20 86.7
MS.gene054617.t1 AT4G25560 53.030 66 31 0 4 69 48 113 1.87e-20 85.9
MS.gene054617.t1 AT3G09370 44.186 86 48 0 4 89 170 255 2.24e-20 87.4
MS.gene054617.t1 AT5G02320 35.616 146 83 4 4 145 162 300 2.35e-20 87.4
MS.gene054617.t1 AT5G02320 35.616 146 83 4 4 145 162 300 2.35e-20 87.4
MS.gene054617.t1 AT5G16600 52.174 69 33 0 1 69 47 115 2.60e-20 86.3
MS.gene054617.t1 AT3G09370 44.186 86 48 0 4 89 165 250 2.73e-20 87.4
MS.gene054617.t1 AT3G09370 44.186 86 48 0 4 89 178 263 2.81e-20 87.0
MS.gene054617.t1 AT5G35550 59.091 66 27 0 4 69 55 120 2.89e-20 85.1
MS.gene054617.t1 AT2G16720 52.174 69 33 0 1 69 47 115 3.01e-20 85.1
MS.gene054617.t1 AT5G56110 56.061 66 29 0 4 69 50 115 3.24e-20 85.9
MS.gene054617.t1 AT3G12820 53.623 69 32 0 1 69 49 117 3.75e-20 84.3
MS.gene054617.t1 AT5G59780 48.529 68 35 0 3 70 24 91 4.04e-20 83.6
MS.gene054617.t1 AT4G13480 51.471 68 33 0 3 70 43 110 4.08e-20 84.7
MS.gene054617.t1 AT5G10280 54.545 66 30 0 4 69 50 115 4.42e-20 85.5
MS.gene054617.t1 AT5G35550 59.091 66 27 0 4 69 52 117 4.45e-20 84.3
MS.gene054617.t1 AT5G57620 53.030 66 31 0 4 69 51 116 4.75e-20 85.5
MS.gene054617.t1 AT3G13890 59.091 66 27 0 4 69 50 115 4.88e-20 85.9
MS.gene054617.t1 AT1G22640 54.545 66 30 0 4 69 50 115 5.13e-20 84.3
MS.gene054617.t1 AT4G05100 54.545 66 30 0 4 69 51 116 5.35e-20 85.1
MS.gene054617.t1 AT4G09460 50.725 69 34 0 1 69 47 115 5.47e-20 84.0
MS.gene054617.t1 AT5G59780 48.529 68 35 0 3 70 45 112 5.49e-20 83.6
MS.gene054617.t1 AT4G38620 50.725 69 34 0 1 69 47 115 5.86e-20 84.3
MS.gene054617.t1 AT3G13890 59.091 66 27 0 4 69 59 124 6.16e-20 85.5
MS.gene054617.t1 AT3G48920 48.485 66 34 0 3 68 55 120 6.25e-20 84.0
MS.gene054617.t1 AT5G55020 56.923 65 28 0 4 68 64 128 6.39e-20 86.3
MS.gene054617.t1 AT1G66230 50.000 70 35 0 1 70 47 116 6.50e-20 84.3
MS.gene054617.t1 AT5G26660 57.576 66 28 0 4 69 19 84 8.99e-20 84.7
MS.gene054617.t1 AT3G46130 48.529 68 35 0 3 70 24 91 9.25e-20 83.2
MS.gene054617.t1 AT1G57560 35.099 151 84 3 4 149 50 191 9.51e-20 84.3
MS.gene054617.t1 AT1G56160 53.623 69 32 0 1 69 49 117 9.91e-20 84.0
MS.gene054617.t1 AT4G01680 57.576 66 28 0 4 69 50 115 1.01e-19 83.2
MS.gene054617.t1 AT4G26930 55.385 65 29 0 4 68 57 121 1.03e-19 85.1
MS.gene054617.t1 AT5G23000 53.030 66 31 0 4 69 51 116 1.07e-19 84.3
MS.gene054617.t1 AT4G37780 46.667 75 40 0 4 78 51 125 1.20e-19 84.0
MS.gene054617.t1 AT3G46130 48.529 68 35 0 3 70 14 81 1.24e-19 82.8
MS.gene054617.t1 AT3G46130 48.529 68 35 0 3 70 46 113 1.32e-19 83.2
MS.gene054617.t1 AT1G57560 56.061 66 29 0 4 69 50 115 1.48e-19 83.2
MS.gene054617.t1 AT5G62320 53.030 66 31 0 4 69 58 123 2.02e-19 82.4
MS.gene054617.t1 AT5G26660 57.576 66 28 0 4 69 50 115 2.04e-19 84.0
MS.gene054617.t1 AT4G34990 53.030 66 31 0 4 69 50 115 2.07e-19 82.8
MS.gene054617.t1 AT1G35515 47.826 69 36 0 1 69 47 115 2.08e-19 81.6
MS.gene054617.t1 AT5G52260 56.061 66 29 0 4 69 50 115 2.11e-19 82.8
MS.gene054617.t1 AT1G06180 52.174 69 33 0 1 69 47 115 2.14e-19 82.4
MS.gene054617.t1 AT4G01680 57.576 66 28 0 4 69 62 127 2.32e-19 84.0
MS.gene054617.t1 AT5G39700 52.381 63 30 0 6 68 93 155 2.39e-19 81.3
MS.gene054617.t1 AT4G32730 41.860 86 47 1 4 86 122 207 2.40e-19 84.7
MS.gene054617.t1 AT4G01680 57.576 66 28 0 4 69 50 115 2.43e-19 83.6
MS.gene054617.t1 AT3G23250 50.725 69 34 0 1 69 47 115 2.78e-19 82.8
MS.gene054617.t1 AT4G12350 53.030 66 31 0 4 69 50 115 2.94e-19 82.8
MS.gene054617.t1 AT3G24310 50.000 68 34 0 3 70 55 122 3.14e-19 82.4
MS.gene054617.t1 AT1G09540 54.545 66 30 0 4 69 50 115 3.40e-19 83.6
MS.gene054617.t1 AT5G16770 51.515 66 32 0 4 69 50 115 3.78e-19 82.8
MS.gene054617.t1 AT5G16770 51.515 66 32 0 4 69 50 115 3.78e-19 82.8
MS.gene054617.t1 AT4G21440 53.030 66 31 0 4 69 50 115 3.91e-19 83.2
MS.gene054617.t1 AT1G63910 56.061 66 29 0 4 69 50 115 4.02e-19 83.2
MS.gene054617.t1 AT4G22680 51.515 66 32 0 4 69 50 115 4.46e-19 82.0
MS.gene054617.t1 AT3G12720 54.545 66 30 0 4 69 60 125 4.60e-19 82.4
MS.gene054617.t1 AT3G02940 50.000 66 33 0 4 69 50 115 5.16e-19 82.4
MS.gene054617.t1 AT5G16770 51.515 66 32 0 4 69 50 115 5.35e-19 82.8
MS.gene054617.t1 AT5G16770 51.515 66 32 0 4 69 50 115 5.35e-19 82.8
MS.gene054617.t1 AT3G27785 53.030 66 31 0 4 69 224 289 5.81e-19 83.2
MS.gene054617.t1 AT5G65790 53.030 66 31 0 4 69 51 116 6.22e-19 82.8
MS.gene054617.t1 AT4G18770 38.710 93 57 0 4 96 252 344 7.04e-19 82.8
MS.gene054617.t1 AT3G01530 39.796 98 54 1 3 95 62 159 7.13e-19 80.1
MS.gene054617.t1 AT3G02940 50.000 66 33 0 4 69 50 115 7.70e-19 82.0
MS.gene054617.t1 AT3G02940 50.000 66 33 0 4 69 50 115 7.70e-19 82.0
MS.gene054617.t1 AT1G25340 47.059 68 36 0 3 70 50 117 9.58e-19 81.3
MS.gene054617.t1 AT4G32730 48.485 66 34 0 4 69 122 187 9.58e-19 83.2
MS.gene054617.t1 AT4G32730 48.485 66 34 0 4 69 122 187 9.58e-19 83.2
MS.gene054617.t1 AT4G32730 48.485 66 34 0 4 69 122 187 9.58e-19 83.2
MS.gene054617.t1 AT4G32730 48.485 66 34 0 4 69 122 187 9.58e-19 83.2
MS.gene054617.t1 AT5G52600 54.545 66 30 0 4 69 50 115 9.66e-19 79.7
MS.gene054617.t1 AT3G30210 51.515 66 32 0 3 68 64 129 1.08e-18 80.9
MS.gene054617.t1 AT2G26960 51.429 70 34 0 4 73 58 127 1.21e-18 82.4
MS.gene054617.t1 AT1G25340 47.059 68 36 0 3 70 50 117 1.24e-18 81.3
MS.gene054617.t1 AT5G11510 42.667 75 43 0 4 78 116 190 1.39e-18 82.4
MS.gene054617.t1 AT5G11510 42.667 75 43 0 4 78 116 190 1.39e-18 82.4
MS.gene054617.t1 AT5G11510 42.667 75 43 0 4 78 116 190 1.39e-18 82.4
MS.gene054617.t1 AT3G49690 51.515 66 32 0 4 69 51 116 1.45e-18 81.3
MS.gene054617.t1 AT5G40350 50.000 66 33 0 3 68 9 74 1.67e-18 78.2
MS.gene054617.t1 AT5G11510 42.667 75 43 0 4 78 116 190 1.71e-18 82.4
MS.gene054617.t1 AT5G11510 42.667 75 43 0 4 78 116 190 1.73e-18 82.4
MS.gene054617.t1 AT5G14340 47.143 70 37 0 1 70 59 128 2.19e-18 80.1
MS.gene054617.t1 AT2G36890 51.515 66 32 0 4 69 51 116 2.22e-18 80.5
MS.gene054617.t1 AT1G68320 47.059 68 36 0 3 70 56 123 2.37e-18 80.1
MS.gene054617.t1 AT4G17785 51.515 66 32 0 4 69 51 116 2.39e-18 80.9
MS.gene054617.t1 AT3G13540 47.826 69 36 0 1 69 58 126 2.41e-18 79.7
MS.gene054617.t1 AT3G60460 53.623 69 31 1 3 70 48 116 2.68e-18 80.5
MS.gene054617.t1 AT1G34670 51.515 66 32 0 4 69 50 115 2.68e-18 80.9
MS.gene054617.t1 AT1G25340 45.588 68 37 0 3 70 55 122 2.71e-18 80.1
MS.gene054617.t1 AT5G40350 50.000 66 33 0 3 68 54 119 2.93e-18 78.6
MS.gene054617.t1 AT4G17785 51.515 66 32 0 4 69 51 116 3.16e-18 80.9
MS.gene054617.t1 AT5G58850 46.269 67 36 0 3 69 139 205 3.19e-18 81.3
MS.gene054617.t1 AT2G36890 51.515 66 32 0 4 69 92 157 3.48e-18 80.5
MS.gene054617.t1 AT5G49330 50.725 69 34 0 1 69 47 115 4.53e-18 80.1
MS.gene054617.t1 AT5G11050 46.269 67 36 0 3 69 139 205 5.84e-18 80.5
MS.gene054617.t1 AT1G48000 48.529 68 35 0 3 70 69 136 5.94e-18 78.6
MS.gene054617.t1 AT5G62470 49.275 69 35 0 1 69 46 114 6.17e-18 79.7
MS.gene054617.t1 AT5G62470 52.308 65 31 0 5 69 51 115 6.53e-18 79.7
MS.gene054617.t1 AT1G71030 52.174 69 33 0 1 69 1 69 6.93e-18 77.0
MS.gene054617.t1 AT1G71030 52.174 69 33 0 1 69 15 83 8.91e-18 77.0
MS.gene054617.t1 AT4G00540 50.000 66 33 0 4 69 141 206 9.04e-18 79.7
MS.gene054617.t1 AT2G25230 46.575 73 38 1 3 75 60 131 1.09e-17 77.8
MS.gene054617.t1 AT4G00540 50.000 66 33 0 4 69 139 204 1.15e-17 79.7
MS.gene054617.t1 AT5G40360 44.595 74 41 0 4 77 193 266 1.51e-17 79.0
MS.gene054617.t1 AT3G27810 48.485 66 34 0 3 68 8 73 1.52e-17 75.9
MS.gene054617.t1 AT2G26950 45.588 68 37 0 6 73 56 123 1.93e-17 78.6
MS.gene054617.t1 AT3G62610 50.000 66 33 0 4 69 50 115 2.44e-17 78.2
MS.gene054617.t1 AT2G47190 47.059 68 36 0 3 70 57 124 3.09e-17 77.0
MS.gene054617.t1 AT1G74650 49.275 69 35 0 1 69 47 115 3.17e-17 77.8
MS.gene054617.t1 AT3G27810 48.485 66 34 0 3 68 57 122 3.30e-17 76.3
MS.gene054617.t1 AT3G28910 47.826 69 36 0 1 69 47 115 3.93e-17 77.4
MS.gene054617.t1 AT3G47600 50.000 66 33 0 4 69 44 109 3.94e-17 77.4
MS.gene054617.t1 AT3G47600 50.769 65 32 0 5 69 51 115 4.90e-17 77.4
MS.gene054617.t1 AT2G47460 50.000 66 33 0 4 69 50 115 1.00e-16 76.6
MS.gene054617.t1 AT1G08810 47.826 69 36 0 1 69 47 115 1.55e-16 75.1
MS.gene054617.t1 AT5G14750 46.154 65 35 0 12 76 1 65 1.15e-15 70.1
MS.gene054617.t1 AT5G14750 46.154 65 35 0 12 76 1 65 1.15e-15 70.1
MS.gene054617.t1 AT5G40430 45.946 74 39 1 5 78 89 161 1.74e-15 72.0
MS.gene054617.t1 AT1G66380 50.769 65 32 0 5 69 14 78 3.25e-15 68.2
MS.gene054617.t1 AT3G06490 47.059 68 36 0 3 70 56 123 3.89e-15 72.0
MS.gene054617.t1 AT5G49620 47.059 68 36 0 3 70 63 130 4.50e-15 71.6
MS.gene054617.t1 AT1G66370 47.692 65 34 0 5 69 47 111 4.54e-15 70.9
MS.gene054617.t1 AT1G66380 50.769 65 32 0 5 69 47 111 7.82e-15 68.2
MS.gene054617.t1 AT1G22640 49.123 57 29 0 13 69 2 58 5.65e-14 67.0
MS.gene054617.t1 AT1G56650 49.231 65 33 0 5 69 47 111 2.00e-13 66.2
MS.gene054617.t1 AT1G66390 47.692 65 34 0 5 69 47 111 5.63e-13 65.1
MS.gene054617.t1 AT4G25560 53.333 45 21 0 25 69 3 47 7.30e-13 64.3
MS.gene054617.t1 AT3G23250 46.552 58 31 0 12 69 1 58 8.07e-13 64.3
MS.gene054617.t1 AT1G18960 42.424 66 36 1 4 69 45 108 5.11e-12 63.2
MS.gene054617.t1 AT5G59780 46.809 47 25 0 24 70 1 47 7.59e-12 60.8
MS.gene054617.t1 AT5G49620 39.024 82 36 1 3 70 63 144 1.32e-11 62.0
MS.gene054617.t1 AT3G46130 50.000 44 22 0 27 70 4 47 1.33e-11 60.5

Find 55 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATGTTCCGACTGAGTTT+TGG 0.275443 3.4:-89155496 MS.gene054617:CDS
GGTGGTTCTGTTACGGTTGC+TGG 0.281643 3.4:-89155686 MS.gene054617:CDS
TGCGTTGACTCTTGCTCCTC+CGG 0.302915 3.4:-89155588 MS.gene054617:CDS
GTGTTATTGCAAGAGAAGTT+AGG 0.310866 3.4:-89155460 MS.gene054617:CDS
CGGGGAATGGTGTGGAAGAT+AGG 0.313721 3.4:-89155568 MS.gene054617:CDS
ACGGTTGCTGGAGGTGTTAA+TGG 0.340790 3.4:-89155674 MS.gene054617:CDS
CGTAGAGCGGGTTGTGGCGC+TGG 0.374836 3.4:-89155722 MS.gene054617:CDS
AACGAGGGTGGAAATTGTTC+TGG 0.404860 3.4:-89155647 MS.gene054617:CDS
ATAGCGGCACATGCTCAATA+TGG 0.421208 3.4:-89155827 MS.gene054617:CDS
GCGTTGACTCTTGCTCCTCC+GGG 0.426703 3.4:-89155587 MS.gene054617:CDS
TGTTATTGCAAGAGAAGTTA+GGG 0.434501 3.4:-89155459 MS.gene054617:CDS
TCCTTCACCGTCGGTGTCGC+CGG 0.437603 3.4:-89155519 MS.gene054617:CDS
ACTCTTGCTCCTCCGGGGAA+TGG 0.442746 3.4:-89155581 MS.gene054617:CDS
ATAATGCTGTCAAGAATCAT+TGG 0.445366 3.4:-89155760 MS.gene054617:CDS
TGTGGAAGATAGGGAGGAAA+TGG 0.456175 3.4:-89155558 MS.gene054617:CDS
GGCGCTGGTCGTGGTGTTTG+TGG 0.475245 3.4:-89155707 MS.gene054617:CDS
GCGGGTTGTGGCGCTGGTCG+TGG 0.495546 3.4:-89155716 MS.gene054617:CDS
TGTTTGTGGTGGTTCTGTTA+CGG 0.498438 3.4:-89155693 MS.gene054617:CDS
TCGTCTTCTTGTGAAGAAAA+CGG 0.505685 3.4:+89155857 None:intergenic
GGGGAATGGTGTGGAAGATA+GGG 0.506422 3.4:-89155567 MS.gene054617:CDS
TGCTCCTCCGGGGAATGGTG+TGG 0.525929 3.4:-89155576 MS.gene054617:CDS
AGGAAATGGTTGGTGATCAT+CGG 0.529521 3.4:-89155544 MS.gene054617:CDS
GTTAATGGTGGTAACGAGGG+TGG 0.535237 3.4:-89155659 MS.gene054617:CDS
CTTAAGCGTAGAGCGGGTTG+TGG 0.544628 3.4:-89155728 MS.gene054617:CDS
CTATCTTCCACACCATTCCC+CGG 0.547645 3.4:+89155569 None:intergenic
GGTGTTAATGGTGGTAACGA+GGG 0.549090 3.4:-89155662 MS.gene054617:CDS
TCTACGCTTAAGCGTAGAGC+GGG 0.550016 3.4:-89155734 MS.gene054617:CDS
ATGCTCAATATGGTAACCGA+TGG 0.553468 3.4:-89155817 MS.gene054617:CDS
GACTCAGCTGATTACACCAC+CGG 0.566690 3.4:+89155897 None:intergenic
TCATCGGTTTCCTTCACCGT+CGG 0.580511 3.4:-89155528 MS.gene054617:CDS
GCAAGAGTCAACGCAGTCAA+CGG 0.583462 3.4:+89155596 None:intergenic
CAGGAAAATCTTGCAGACTC+CGG 0.584579 3.4:-89155916 MS.gene054617:CDS
AACGGACGGTGCTCCACGGT+GGG 0.587011 3.4:+89155875 None:intergenic
TCCGGCGACACCGACGGTGA+AGG 0.588009 3.4:+89155518 None:intergenic
GAATGGTGTGGAAGATAGGG+AGG 0.593567 3.4:-89155564 MS.gene054617:CDS
ACCGATGGGCTACCATTGCA+AGG 0.605118 3.4:-89155802 MS.gene054617:CDS
ACCAGGTAAAAGCCTTGCAA+TGG 0.616319 3.4:+89155790 None:intergenic
TGCTCAATATGGTAACCGAT+GGG 0.623211 3.4:-89155816 MS.gene054617:CDS
ACAGCATTATCTGTTCTACC+AGG 0.625109 3.4:+89155773 None:intergenic
AGGTGTTAATGGTGGTAACG+AGG 0.628177 3.4:-89155663 MS.gene054617:CDS
GAAGATAGGGAGGAAATGGT+TGG 0.630323 3.4:-89155554 MS.gene054617:CDS
ATCACATCCCAAAACTCAGT+CGG 0.631724 3.4:+89155488 None:intergenic
GCTGGTCGTGGTGTTTGTGG+TGG 0.633717 3.4:-89155704 MS.gene054617:CDS
GAAAATCTTGCAGACTCCGG+TGG 0.636840 3.4:-89155913 MS.gene054617:CDS
GCCTTGCAATGGTAGCCCAT+CGG 0.640144 3.4:+89155801 None:intergenic
CGTTGACTCTTGCTCCTCCG+GGG 0.647010 3.4:-89155586 MS.gene054617:CDS
AGAAAACGGACGGTGCTCCA+CGG 0.647790 3.4:+89155871 None:intergenic
GGTTCTGTTACGGTTGCTGG+AGG 0.649526 3.4:-89155683 MS.gene054617:CDS
AAACGGACGGTGCTCCACGG+TGG 0.676861 3.4:+89155874 None:intergenic
CTTCTTGTGAAGAAAACGGA+CGG 0.679625 3.4:+89155861 None:intergenic
CTCTACGCTTAAGCGTAGAG+CGG 0.680224 3.4:-89155735 MS.gene054617:CDS
GTTGCTGGAGGTGTTAATGG+TGG 0.730010 3.4:-89155671 MS.gene054617:CDS
AGAAGACGAAACAATCATAG+CGG 0.749421 3.4:-89155843 MS.gene054617:CDS
TAATCAGCTGAGTCCCACCG+TGG 0.751068 3.4:-89155888 MS.gene054617:CDS
TCTTCCACACCATTCCCCGG+AGG 0.762613 3.4:+89155572 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
ATAATGCTGTCAAGAATCAT+TGG - chr3.4:89155681-89155700 MS.gene054617:CDS 30.0%
TGTTATTGCAAGAGAAGTTA+GGG - chr3.4:89155982-89156001 MS.gene054617:intron 30.0%
AGAAGACGAAACAATCATAG+CGG - chr3.4:89155598-89155617 MS.gene054617:CDS 35.0%
TCGTCTTCTTGTGAAGAAAA+CGG + chr3.4:89155587-89155606 None:intergenic 35.0%
! AAAATGTTCCGACTGAGTTT+TGG - chr3.4:89155945-89155964 MS.gene054617:intron 35.0%
! AAATGTTCCGACTGAGTTTT+GGG - chr3.4:89155946-89155965 MS.gene054617:intron 35.0%
! GTGTTATTGCAAGAGAAGTT+AGG - chr3.4:89155981-89156000 MS.gene054617:intron 35.0%
!! AGACAGAATTTTAACACGAC+TGG - chr3.4:89155445-89155464 MS.gene054617:CDS 35.0%
AACAACATGGAGCTAGAAAC+TGG - chr3.4:89155471-89155490 MS.gene054617:CDS 40.0%
ACAGCATTATCTGTTCTACC+AGG + chr3.4:89155671-89155690 None:intergenic 40.0%
ATCACATCCCAAAACTCAGT+CGG + chr3.4:89155956-89155975 None:intergenic 40.0%
ATGCTCAATATGGTAACCGA+TGG - chr3.4:89155624-89155643 MS.gene054617:CDS 40.0%
CTTCTTGTGAAGAAAACGGA+CGG + chr3.4:89155583-89155602 None:intergenic 40.0%
TGCTCAATATGGTAACCGAT+GGG - chr3.4:89155625-89155644 MS.gene054617:CDS 40.0%
! AACTCAGTCGGAACATTTTC+CGG + chr3.4:89155944-89155963 None:intergenic 40.0%
! CTGACCTTCCTTTTATGTAG+CGG + chr3.4:89155508-89155527 None:intergenic 40.0%
! TGTTTGTGGTGGTTCTGTTA+CGG - chr3.4:89155748-89155767 MS.gene054617:CDS 40.0%
!! AGGAAATGGTTGGTGATCAT+CGG - chr3.4:89155897-89155916 MS.gene054617:CDS 40.0%
!! TTCTGGTCAGTTTGCTTTTC+AGG - chr3.4:89155811-89155830 MS.gene054617:CDS 40.0%
AACGAGGGTGGAAATTGTTC+TGG - chr3.4:89155794-89155813 MS.gene054617:CDS 45.0%
ACCAGGTAAAAGCCTTGCAA+TGG + chr3.4:89155654-89155673 None:intergenic 45.0%
ATAGCGGCACATGCTCAATA+TGG - chr3.4:89155614-89155633 MS.gene054617:CDS 45.0%
CAGGAAAATCTTGCAGACTC+CGG - chr3.4:89155525-89155544 MS.gene054617:CDS 45.0%
CGCTACATAAAAGGAAGGTC+AGG - chr3.4:89155506-89155525 MS.gene054617:CDS 45.0%
CTCATCAGCCGCTACATAAA+AGG - chr3.4:89155497-89155516 MS.gene054617:CDS 45.0%
GAAGATAGGGAGGAAATGGT+TGG - chr3.4:89155887-89155906 MS.gene054617:CDS 45.0%
TCAGCCGCTACATAAAAGGA+AGG - chr3.4:89155501-89155520 MS.gene054617:CDS 45.0%
TGTGGAAGATAGGGAGGAAA+TGG - chr3.4:89155883-89155902 MS.gene054617:CDS 45.0%
! ACACGACTGGTTGAACAACA+TGG - chr3.4:89155458-89155477 MS.gene054617:CDS 45.0%
! ACCATTGCAAGGCTTTTACC+TGG - chr3.4:89155650-89155669 MS.gene054617:CDS 45.0%
! AGGTGTTAATGGTGGTAACG+AGG - chr3.4:89155778-89155797 MS.gene054617:CDS 45.0%
! GGTGTTAATGGTGGTAACGA+GGG - chr3.4:89155779-89155798 MS.gene054617:CDS 45.0%
!! TGGTCAGTTTGCTTTTCAGG+TGG - chr3.4:89155814-89155833 MS.gene054617:CDS 45.0%
!!! GAGTTTTGGGATGTGATGAG+AGG - chr3.4:89155959-89155978 MS.gene054617:intron 45.0%
CTATCTTCCACACCATTCCC+CGG + chr3.4:89155875-89155894 None:intergenic 50.0%
CTCTACGCTTAAGCGTAGAG+CGG - chr3.4:89155706-89155725 MS.gene054617:CDS 50.0%
GAAAATCTTGCAGACTCCGG+TGG - chr3.4:89155528-89155547 MS.gene054617:CDS 50.0%
GAATGGTGTGGAAGATAGGG+AGG - chr3.4:89155877-89155896 MS.gene054617:CDS 50.0%
GACTCAGCTGATTACACCAC+CGG + chr3.4:89155547-89155566 None:intergenic 50.0%
GCAAGAGTCAACGCAGTCAA+CGG + chr3.4:89155848-89155867 None:intergenic 50.0%
GGGGAATGGTGTGGAAGATA+GGG - chr3.4:89155874-89155893 MS.gene054617:CDS 50.0%
TCTACGCTTAAGCGTAGAGC+GGG - chr3.4:89155707-89155726 MS.gene054617:CDS 50.0%
! GTTAATGGTGGTAACGAGGG+TGG - chr3.4:89155782-89155801 MS.gene054617:CDS 50.0%
!! ACGGTTGCTGGAGGTGTTAA+TGG - chr3.4:89155767-89155786 MS.gene054617:CDS 50.0%
!! GTTGCTGGAGGTGTTAATGG+TGG - chr3.4:89155770-89155789 MS.gene054617:CDS 50.0%
!! TCATCGGTTTCCTTCACCGT+CGG - chr3.4:89155913-89155932 MS.gene054617:CDS 50.0%
AGAAAACGGACGGTGCTCCA+CGG + chr3.4:89155573-89155592 None:intergenic 55.0%
CGGGGAATGGTGTGGAAGAT+AGG - chr3.4:89155873-89155892 MS.gene054617:CDS 55.0%
GCCTTGCAATGGTAGCCCAT+CGG + chr3.4:89155643-89155662 None:intergenic 55.0%
GGTTCTGTTACGGTTGCTGG+AGG - chr3.4:89155758-89155777 MS.gene054617:CDS 55.0%
TAATCAGCTGAGTCCCACCG+TGG - chr3.4:89155553-89155572 MS.gene054617:CDS 55.0%
! ACATTTTCCGGCGACACCGA+CGG + chr3.4:89155932-89155951 None:intergenic 55.0%
! GGTGGTTCTGTTACGGTTGC+TGG - chr3.4:89155755-89155774 MS.gene054617:CDS 55.0%
!! ACCGATGGGCTACCATTGCA+AGG - chr3.4:89155639-89155658 MS.gene054617:CDS 55.0%
!! CTTAAGCGTAGAGCGGGTTG+TGG - chr3.4:89155713-89155732 MS.gene054617:CDS 55.0%
!! TGCGTTGACTCTTGCTCCTC+CGG - chr3.4:89155853-89155872 MS.gene054617:CDS 55.0%
ACTCTTGCTCCTCCGGGGAA+TGG - chr3.4:89155860-89155879 MS.gene054617:CDS 60.0%
GCTGGTCGTGGTGTTTGTGG+TGG - chr3.4:89155737-89155756 MS.gene054617:CDS 60.0%
TCTTCCACACCATTCCCCGG+AGG + chr3.4:89155872-89155891 None:intergenic 60.0%
!! CGTTGACTCTTGCTCCTCCG+GGG - chr3.4:89155855-89155874 MS.gene054617:CDS 60.0%
!! GCGTTGACTCTTGCTCCTCC+GGG - chr3.4:89155854-89155873 MS.gene054617:CDS 60.0%
AAACGGACGGTGCTCCACGG+TGG + chr3.4:89155570-89155589 None:intergenic 65.0%
AACGGACGGTGCTCCACGGT+GGG + chr3.4:89155569-89155588 None:intergenic 65.0%
TGCTCCTCCGGGGAATGGTG+TGG - chr3.4:89155865-89155884 MS.gene054617:CDS 65.0%
!! GGCGCTGGTCGTGGTGTTTG+TGG - chr3.4:89155734-89155753 MS.gene054617:CDS 65.0%
!! TCCTTCACCGTCGGTGTCGC+CGG - chr3.4:89155922-89155941 MS.gene054617:intron 65.0%
TCCGGCGACACCGACGGTGA+AGG + chr3.4:89155926-89155945 None:intergenic 70.0%
!! CGTAGAGCGGGTTGTGGCGC+TGG - chr3.4:89155719-89155738 MS.gene054617:CDS 70.0%
!! GCGGGTTGTGGCGCTGGTCG+TGG - chr3.4:89155725-89155744 MS.gene054617:CDS 75.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 89155430 89156033 89155430 ID=MS.gene054617
chr3.4 mRNA 89155430 89156033 89155430 ID=MS.gene054617.t1;Parent=MS.gene054617
chr3.4 exon 89156029 89156033 89156029 ID=MS.gene054617.t1.exon1;Parent=MS.gene054617.t1
chr3.4 CDS 89156029 89156033 89156029 ID=cds.MS.gene054617.t1;Parent=MS.gene054617.t1
chr3.4 exon 89155430 89155940 89155430 ID=MS.gene054617.t1.exon2;Parent=MS.gene054617.t1
chr3.4 CDS 89155430 89155940 89155430 ID=cds.MS.gene054617.t1;Parent=MS.gene054617.t1
Gene Sequence

>MS.gene054617

ATGGAGTGCAGAAGAAGACAGAATTTTAACACGACTGGTTGAACAACATGGAGCTAGAAACTGGTCACTCATCAGCCGCTACATAAAAGGAAGGTCAGGAAAATCTTGCAGACTCCGGTGGTGTAATCAGCTGAGTCCCACCGTGGAGCACCGTCCGTTTTCTTCACAAGAAGACGAAACAATCATAGCGGCACATGCTCAATATGGTAACCGATGGGCTACCATTGCAAGGCTTTTACCTGGTAGAACAGATAATGCTGTCAAGAATCATTGGAACTCTACGCTTAAGCGTAGAGCGGGTTGTGGCGCTGGTCGTGGTGTTTGTGGTGGTTCTGTTACGGTTGCTGGAGGTGTTAATGGTGGTAACGAGGGTGGAAATTGTTCTGGTCAGTTTGCTTTTCAGGTGGAAGATGATCCGTTGACTGCGTTGACTCTTGCTCCTCCGGGGAATGGTGTGGAAGATAGGGAGGAAATGGTTGGTGATCATCGGTTTCCTTCACCGTCGGTGTCGCCGGAAAATGTTCCGACTGAGTTTTGGGATGTGATGAGAGGTGTTATTGCAAGAGAAGTTAGGGAATATGTTTCTTCTAATTTTTCTCATTAA

Protein sequence

>MS.gene054617.t1

MESGKSCRLRWCNQLSPTVEHRPFSSQEDETIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRAGCGAGRGVCGGSVTVAGGVNGGNEGGNCSGQFAFQVEDDPLTALTLAPPGNGVEDREEMVGDHRFPSPSVSPENVPTEFWDVMRGVIAREVREYVSSNFSH