Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07324.t1 | XP_013469155.1 | 94.8 | 231 | 12 | 0 | 1 | 231 | 1 | 231 | 6.30E-95 | 357.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07324.t1 | A0A072VMF3 | 94.8 | 231 | 12 | 0 | 1 | 231 | 32 | 262 | 4.5e-95 | 357.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050352 | MS.gene07324 | 0.992669 | 1.07E-194 | -1.69E-46 |
| MS.gene057684 | MS.gene07324 | -0.801052 | 1.08E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07324.t1 | MTR_1g086670 | 97.835 | 231 | 5 | 0 | 1 | 231 | 1 | 231 | 6.06e-168 | 462 |
| MS.gene07324.t1 | MTR_1g086670 | 97.835 | 231 | 5 | 0 | 1 | 231 | 32 | 262 | 7.27e-168 | 463 |
| MS.gene07324.t1 | MTR_2g033650 | 40.807 | 223 | 105 | 7 | 9 | 229 | 7 | 204 | 5.40e-31 | 114 |
| MS.gene07324.t1 | MTR_4g122710 | 33.816 | 207 | 132 | 3 | 14 | 219 | 12 | 214 | 2.01e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07324.t1 | AT1G02380 | 34.404 | 218 | 106 | 8 | 10 | 218 | 8 | 197 | 7.88e-27 | 103 |
| MS.gene07324.t1 | AT3G17120 | 43.860 | 114 | 62 | 2 | 112 | 224 | 78 | 190 | 5.45e-18 | 79.7 |
| MS.gene07324.t1 | AT3G17120 | 43.860 | 114 | 62 | 2 | 112 | 224 | 78 | 190 | 5.45e-18 | 79.7 |
| MS.gene07324.t1 | AT3G17120 | 43.860 | 114 | 62 | 2 | 112 | 224 | 78 | 190 | 5.45e-18 | 79.7 |
| MS.gene07324.t1 | AT3G17120 | 43.860 | 114 | 62 | 2 | 112 | 224 | 78 | 190 | 5.45e-18 | 79.7 |
| MS.gene07324.t1 | AT3G17120 | 43.860 | 114 | 62 | 2 | 112 | 224 | 78 | 190 | 5.45e-18 | 79.7 |
| MS.gene07324.t1 | AT4G01960 | 29.493 | 217 | 125 | 7 | 9 | 218 | 8 | 203 | 6.48e-18 | 80.1 |
| MS.gene07324.t1 | AT4G01960 | 29.493 | 217 | 125 | 7 | 9 | 218 | 8 | 203 | 6.48e-18 | 80.1 |
| MS.gene07324.t1 | AT4G01960 | 30.270 | 185 | 98 | 7 | 9 | 184 | 8 | 170 | 5.86e-15 | 71.2 |
Find 0 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTCATAATTACTTAAAT+AGG | + | 11035:17915-17934 | MS.gene07324:intron | 10.0% |
| !! | AAAAAGTAAAAAGTTTGTAT+AGG | - | 11035:16906-16925 | MS.gene07324:intergenic | 15.0% |
| !!! | TCGTTTTTTCAAATTATTAT+CGG | + | 11035:18210-18229 | MS.gene07324:intron | 15.0% |
| !! | AATACAAAAGATTACGTATA+TGG | - | 11035:16477-16496 | MS.gene07324:intergenic | 20.0% |
| !! | ACCACAATGAAAATTTATAA+AGG | - | 11035:17379-17398 | MS.gene07324:intergenic | 20.0% |
| !! | TAAAGATGTTCATATGAAAT+AGG | - | 11035:17644-17663 | MS.gene07324:intergenic | 20.0% |
| !! | TACAAATACAATTGAATTCT+AGG | - | 11035:16696-16715 | MS.gene07324:intergenic | 20.0% |
| !!! | TCCTTTATAAATTTTCATTG+TGG | + | 11035:17375-17394 | MS.gene07324:intron | 20.0% |
| !!! | TTACTTTTTCAACTCTTATA+AGG | + | 11035:16917-16936 | MS.gene07324:intron | 20.0% |
| ! | AATTTAGATGGATCAGAAAA+GGG | + | 11035:15926-15945 | MS.gene07324:CDS | 25.0% |
| ! | CGAATGTACATTATATCATA+AGG | + | 11035:17198-17217 | MS.gene07324:intron | 25.0% |
| ! | GAAATGATTATTCAGTATCA+GGG | - | 11035:17150-17169 | MS.gene07324:intergenic | 25.0% |
| ! | GTTCATATATATTTCACATG+CGG | + | 11035:16580-16599 | MS.gene07324:intron | 25.0% |
| ! | TCAAAGAGAAAAAGAAAAAG+AGG | + | 11035:15793-15812 | MS.gene07324:CDS | 25.0% |
| ! | TCAGTTAATTCAAACTCAAT+TGG | + | 11035:18389-18408 | MS.gene07324:intron | 25.0% |
| ! | TCATAATTACTTAAATAGGC+CGG | + | 11035:17919-17938 | MS.gene07324:intron | 25.0% |
| ! | TGAAATGATTATTCAGTATC+AGG | - | 11035:17151-17170 | MS.gene07324:intergenic | 25.0% |
| !! | AAAAGCCTATTTAGCTTAAT+AGG | - | 11035:17987-18006 | MS.gene07324:intergenic | 25.0% |
| !! | AAAGGTTTAGAACATGTTAA+TGG | + | 11035:16040-16059 | MS.gene07324:CDS | 25.0% |
| !! | AAATTACATGTTCTTTTGCT+GGG | + | 11035:16331-16350 | MS.gene07324:intron | 25.0% |
| !! | ATAATCAACATGAGTTTTCA+GGG | + | 11035:17734-17753 | MS.gene07324:intron | 25.0% |
| !! | TAAATTACATGTTCTTTTGC+TGG | + | 11035:16330-16349 | MS.gene07324:intron | 25.0% |
| !! | TATGAAATAGGCTTTTAAAC+AGG | - | 11035:17632-17651 | MS.gene07324:intergenic | 25.0% |
| !! | TCAAATTCTTGTGATGTTTT+TGG | + | 11035:15983-16002 | MS.gene07324:CDS | 25.0% |
| !! | TGAATGTAATCTAGAATTGT+TGG | + | 11035:16012-16031 | MS.gene07324:CDS | 25.0% |
| !!! | GCTTTTTTCTTAAATAGAGA+AGG | - | 11035:18023-18042 | MS.gene07324:intergenic | 25.0% |
| !!! | TAGTTGTTTTATAGCTATGA+GGG | + | 11035:17120-17139 | MS.gene07324:intron | 25.0% |
| !!! | TTAGTTGTTTTATAGCTATG+AGG | + | 11035:17119-17138 | MS.gene07324:intron | 25.0% |
| !!! | TTTTGAAATCAAATCTGCAT+AGG | + | 11035:16964-16983 | MS.gene07324:intron | 25.0% |
| AAAGAATATCAACAAGTCCT+TGG | - | 11035:17332-17351 | None:intergenic | 30.0% | |
| AATGGGGTTATGAATTTAGA+TGG | + | 11035:15914-15933 | MS.gene07324:CDS | 30.0% | |
| AGAGATTCAACTTCAAAGAA+TGG | + | 11035:15875-15894 | MS.gene07324:CDS | 30.0% | |
| AGATATAGAGGATATCACTT+GGG | + | 11035:16857-16876 | MS.gene07324:intron | 30.0% | |
| ATATACAAATCTTTCTGCCA+TGG | + | 11035:16267-16286 | MS.gene07324:CDS | 30.0% | |
| CATATGCTTACATCTCAAAT+TGG | + | 11035:16444-16463 | MS.gene07324:intron | 30.0% | |
| CTCTATTTAAGAAAAAAGCC+TGG | + | 11035:18024-18043 | MS.gene07324:intron | 30.0% | |
| CTTAAGATTGATGTTAGTTG+TGG | - | 11035:16779-16798 | MS.gene07324:intergenic | 30.0% | |
| GAAAAAAATAGTGATGACCA+TGG | - | 11035:16287-16306 | MS.gene07324:intergenic | 30.0% | |
| GAACATGTTAATGGAAATCA+TGG | + | 11035:16049-16068 | MS.gene07324:CDS | 30.0% | |
| GAATTTAGATGGATCAGAAA+AGG | + | 11035:15925-15944 | MS.gene07324:CDS | 30.0% | |
| GTAATTCACAATTACAGAAG+TGG | - | 11035:17258-17277 | MS.gene07324:intergenic | 30.0% | |
| GTTGAATTTGACATTGAAAG+TGG | + | 11035:15815-15834 | MS.gene07324:CDS | 30.0% | |
| TAGATATAGAGGATATCACT+TGG | + | 11035:16856-16875 | MS.gene07324:intron | 30.0% | |
| TAGTCATCACATAGATATAG+AGG | + | 11035:16845-16864 | MS.gene07324:intron | 30.0% | |
| TCATTTCACATTATACAGAG+TGG | + | 11035:17163-17182 | MS.gene07324:intron | 30.0% | |
| TCTATATCTATGTGATGACT+AGG | - | 11035:16846-16865 | MS.gene07324:intergenic | 30.0% | |
| TGATATAGAACACAAGAATC+AGG | - | 11035:16642-16661 | MS.gene07324:intergenic | 30.0% | |
| TGGTGATCATAAATTTGTGA+AGG | + | 11035:16150-16169 | MS.gene07324:CDS | 30.0% | |
| TGTGTTTCATAGAGGATAAT+TGG | + | 11035:18277-18296 | MS.gene07324:intron | 30.0% | |
| TGTTCAATCAAGATTGAAGA+AGG | - | 11035:17280-17299 | MS.gene07324:intergenic | 30.0% | |
| TTAGTTAAGACTTTCCTTTC+AGG | + | 11035:18490-18509 | MS.gene07324:intron | 30.0% | |
| TTCTGCTACATCTCAAAATA+TGG | + | 11035:16737-16756 | MS.gene07324:intron | 30.0% | |
| TTTATCCTTATCGTTGCATA+GGG | - | 11035:18113-18132 | MS.gene07324:intergenic | 30.0% | |
| ! | AATTCTTGTGTTAAGTTGCA+AGG | + | 11035:16667-16686 | MS.gene07324:intron | 30.0% |
| ! | ATGTAATCTAGAATTGTTGG+TGG | + | 11035:16015-16034 | MS.gene07324:CDS | 30.0% |
| ! | GATAATCAACATGAGTTTTC+AGG | + | 11035:17733-17752 | MS.gene07324:intron | 30.0% |
| !! | ATAGGCTTTTAAAAAAGCCT+AGG | + | 11035:17997-18016 | MS.gene07324:intron | 30.0% |
| !! | ATTATACAGAGTGGATTTTG+TGG | + | 11035:17172-17191 | MS.gene07324:intron | 30.0% |
| !!! | TTGTCATAGGCTTACTTTTT+AGG | + | 11035:17566-17585 | MS.gene07324:intron | 30.0% |
| ACTACTTTGTTGAAGTGGAT+GGG | + | 11035:17462-17481 | MS.gene07324:intron | 35.0% | |
| CAATGTCAGATGAGTTTGAT+AGG | - | 11035:18333-18352 | MS.gene07324:intergenic | 35.0% | |
| CATTTGTCTTGAATCTGCAA+TGG | + | 11035:17088-17107 | MS.gene07324:intron | 35.0% | |
| GATATAGAGGATATCACTTG+GGG | + | 11035:16858-16877 | MS.gene07324:intron | 35.0% | |
| GCATAAAGGACACTAACATA+TGG | + | 11035:17435-17454 | MS.gene07324:intron | 35.0% | |
| GGATCAGAAAAGGGTAAAAA+TGG | + | 11035:15935-15954 | MS.gene07324:CDS | 35.0% | |
| GTCCTTTATGCTACAACTTT+AGG | - | 11035:17426-17445 | MS.gene07324:intergenic | 35.0% | |
| GTGTTGAATGTAACATGTGT+CGG | - | 11035:18188-18207 | MS.gene07324:intergenic | 35.0% | |
| GTTTATCCTTATCGTTGCAT+AGG | - | 11035:18114-18133 | MS.gene07324:intergenic | 35.0% | |
| TACTACTTTGTTGAAGTGGA+TGG | + | 11035:17461-17480 | MS.gene07324:intron | 35.0% | |
| TAGAGGATAATTGGATGTCT+AGG | + | 11035:18286-18305 | MS.gene07324:intron | 35.0% | |
| TGCTGTAATCAATGCTCATT+TGG | + | 11035:16367-16386 | MS.gene07324:intron | 35.0% | |
| TTCCTCGTCATCATATTTCA+CGG | + | 11035:16307-16326 | MS.gene07324:CDS | 35.0% | |
| TTCTTAAATAGAGAAGGCCT+AGG | - | 11035:18017-18036 | MS.gene07324:intergenic | 35.0% | |
| TTTAAGAAAAAAGCCTGGCA+TGG | + | 11035:18029-18048 | MS.gene07324:intron | 35.0% | |
| TTTGTATATGTCGAAGACGA+CGG | - | 11035:16256-16275 | MS.gene07324:intergenic | 35.0% | |
| ! | ACAGCTTCAATCAAAAGTGT+AGG | - | 11035:18146-18165 | MS.gene07324:intergenic | 35.0% |
| ! | AGCCATTCAAAAAGCCTTTT+TGG | - | 11035:17954-17973 | MS.gene07324:intergenic | 35.0% |
| ! | CTAGAATTGTTGGTGGATAA+AGG | + | 11035:16022-16041 | MS.gene07324:CDS | 35.0% |
| ! | CTTCAAAGAATGGTTTTCCT+TGG | + | 11035:15885-15904 | MS.gene07324:CDS | 35.0% |
| ! | GCTTAGGCCTTCTAAAAAAT+TGG | - | 11035:17534-17553 | MS.gene07324:intergenic | 35.0% |
| !! | AAAAGCCTTTTTGGCCTATT+AGG | - | 11035:17945-17964 | MS.gene07324:intergenic | 35.0% |
| !! | TGAGCATTGATTACAGCATA+TGG | - | 11035:16365-16384 | MS.gene07324:intergenic | 35.0% |
| AGTAACTTACTACAGTGCCA+AGG | + | 11035:17312-17331 | MS.gene07324:intron | 40.0% | |
| CCTGGCCTATTAAGCTAAAT+AGG | + | 11035:17979-17998 | MS.gene07324:intron | 40.0% | |
| GGCCTAAAGTTGTAGCATAA+AGG | + | 11035:17421-17440 | MS.gene07324:intron | 40.0% | |
| GTCGTACTACTTTGTTGAAG+TGG | + | 11035:17457-17476 | MS.gene07324:intron | 40.0% | |
| TCCATGTCTGTGTTTCATAG+AGG | + | 11035:18269-18288 | MS.gene07324:intron | 40.0% | |
| TCCTCTATGAAACACAGACA+TGG | - | 11035:18273-18292 | MS.gene07324:intergenic | 40.0% | |
| TCGCAGATTTGATTCCTGAA+AGG | - | 11035:18507-18526 | MS.gene07324:intergenic | 40.0% | |
| TTGTTGAAGTGGATGGGAAT+AGG | + | 11035:17468-17487 | MS.gene07324:intron | 40.0% | |
| ! | AAGGCTTTTTGAATGGCTTG+TGG | + | 11035:17956-17975 | MS.gene07324:intron | 40.0% |
| ! | AGAATGGTTTTCCTTGGTCA+TGG | + | 11035:15891-15910 | MS.gene07324:CDS | 40.0% |
| ! | AGGCCTTCTAAAAAATTGGC+AGG | - | 11035:17530-17549 | MS.gene07324:intergenic | 40.0% |
| ! | CCTATTTAGCTTAATAGGCC+AGG | - | 11035:17982-18001 | MS.gene07324:intergenic | 40.0% |
| ! | GGCCAAAAAGGCTTTTTGAA+TGG | + | 11035:17949-17968 | MS.gene07324:intron | 40.0% |
| ! | GTTTTCCTTGGTCATGGAAT+GGG | + | 11035:15897-15916 | MS.gene07324:CDS | 40.0% |
| ! | TACCGTGAAATATGATGACG+AGG | - | 11035:16312-16331 | MS.gene07324:intergenic | 40.0% |
| ! | TGTTGTCTTTCTGCTCTGAA+AGG | + | 11035:17399-17418 | MS.gene07324:intron | 40.0% |
| ! | TTCTAAAAAATTGGCAGGCC+AGG | - | 11035:17525-17544 | MS.gene07324:intergenic | 40.0% |
| ! | TTTTCCTTGGTCATGGAATG+GGG | + | 11035:15898-15917 | MS.gene07324:CDS | 40.0% |
| !! | GTTGTCTTTCTGCTCTGAAA+GGG | + | 11035:17400-17419 | MS.gene07324:intron | 40.0% |
| !!! | TGGCCTGCCAATTTTTTAGA+AGG | + | 11035:17524-17543 | MS.gene07324:intron | 40.0% |
| !!! | TTTTTTAGAAGGCCTAAGCC+TGG | + | 11035:17535-17554 | MS.gene07324:intron | 40.0% |
| AAGCCTTACAAAGCCTAGCT+CGG | - | 11035:17499-17518 | MS.gene07324:intergenic | 45.0% | |
| AATTAGCTGAGCTTGCGTTG+AGG | + | 11035:16173-16192 | MS.gene07324:CDS | 45.0% | |
| ACGAACTTCAACACCAGCAA+TGG | + | 11035:18607-18626 | MS.gene07324:CDS | 45.0% | |
| ACGACACGACACTAACACAT+CGG | - | 11035:18238-18257 | MS.gene07324:intergenic | 45.0% | |
| ATAACCCCATTCCATGACCA+AGG | - | 11035:15905-15924 | MS.gene07324:intergenic | 45.0% | |
| CATGCGGCTCTTCTAACATT+TGG | + | 11035:16596-16615 | MS.gene07324:intron | 45.0% | |
| CCTTATCGTTGCATAGGGAT+GGG | - | 11035:18108-18127 | MS.gene07324:intergenic | 45.0% | |
| CTTAAATAGGCCGGCCTAAT+AGG | + | 11035:17928-17947 | MS.gene07324:intron | 45.0% | |
| TCCTTATCGTTGCATAGGGA+TGG | - | 11035:18109-18128 | MS.gene07324:intergenic | 45.0% | |
| TGATCACCAGCATCCAAAGA+TGG | - | 11035:16139-16158 | MS.gene07324:intergenic | 45.0% | |
| ! | AGGCTTTTAAACAGGCTAGC+AGG | - | 11035:17624-17643 | MS.gene07324:intergenic | 45.0% |
| ! | GGTTTTCCTTGGTCATGGAA+TGG | + | 11035:15896-15915 | MS.gene07324:CDS | 45.0% |
| ! | TTGCTGGTGTTGAAGTTCGT+AGG | - | 11035:18607-18626 | MS.gene07324:intergenic | 45.0% |
| !! | TTTTTGAATGGCTTGTGGCC+TGG | + | 11035:17961-17980 | MS.gene07324:intron | 45.0% |
| !!! | TTACTTTTTAGGCCTGAGCC+TGG | + | 11035:17577-17596 | MS.gene07324:intron | 45.0% |
| ACCAGCAATGGAGATGAACC+TGG | + | 11035:18619-18638 | MS.gene07324:CDS | 50.0% | |
| AGAGGTCCATCTTTGGATGC+TGG | + | 11035:16130-16149 | MS.gene07324:CDS | 50.0% | |
| CCCATCCCTATGCAACGATA+AGG | + | 11035:18105-18124 | MS.gene07324:intron | 50.0% | |
| CGTTGCATAGGGATGGGAAT+AGG | - | 11035:18102-18121 | MS.gene07324:intergenic | 50.0% | |
| GAAGTGGATGGGAATAGGCT+GGG | + | 11035:17473-17492 | MS.gene07324:intron | 50.0% | |
| GCATCCAAAGATGGACCTCT+AGG | - | 11035:16130-16149 | MS.gene07324:intergenic | 50.0% | |
| TAGCATAGCGCTGCCTGTAT+CGG | + | 11035:16545-16564 | MS.gene07324:intron | 50.0% | |
| TAGTGTCGTGTCGTCGTGTT+AGG | + | 11035:18244-18263 | MS.gene07324:intron | 50.0% | |
| TATCAGGCTTTCAGAAGGCC+AGG | - | 11035:17598-17617 | MS.gene07324:intergenic | 50.0% | |
| TCAGCTGTTGCATCAGACGA+AGG | + | 11035:18562-18581 | MS.gene07324:CDS | 50.0% | |
| TCCAAAGATGGACCTCTAGG+AGG | - | 11035:16127-16146 | MS.gene07324:intergenic | 50.0% | |
| TGAAGTGGATGGGAATAGGC+TGG | + | 11035:17472-17491 | MS.gene07324:intron | 50.0% | |
| TGGTGAAAACACGAGCGAAG+AGG | + | 11035:15835-15854 | MS.gene07324:CDS | 50.0% | |
| ! | CCAAGCCAATGTACCGATAC+AGG | - | 11035:16561-16580 | MS.gene07324:intergenic | 50.0% |
| ! | CCTGTATCGGTACATTGGCT+TGG | + | 11035:16558-16577 | MS.gene07324:intron | 50.0% |
| ! | CTGATGCAACAGCTGACTCA+GGG | - | 11035:18558-18577 | MS.gene07324:intergenic | 50.0% |
| ! | GGCCTTCTGAAAGCCTGATA+CGG | + | 11035:17598-17617 | MS.gene07324:intron | 50.0% |
| ! | TCTGATGCAACAGCTGACTC+AGG | - | 11035:18559-18578 | MS.gene07324:intergenic | 50.0% |
| ! | TGATGCAACAGCTGACTCAG+GGG | - | 11035:18557-18576 | MS.gene07324:intergenic | 50.0% |
| !! | GCCTTTTTGGCCTATTAGGC+CGG | - | 11035:17941-17960 | MS.gene07324:intergenic | 50.0% |
| !!! | GGTGGCTTTTGAGGCTTTCT+TGG | - | 11035:16100-16119 | MS.gene07324:intergenic | 50.0% |
| AAGCCACCTTTGCCTCCTAG+AGG | + | 11035:16112-16131 | MS.gene07324:CDS | 55.0% | |
| CATAGGGATGGGAATAGGCC+AGG | - | 11035:18097-18116 | MS.gene07324:intergenic | 55.0% | |
| CTGCGAGTAGTGCGTCTGTT+GGG | + | 11035:18521-18540 | MS.gene07324:CDS | 55.0% | |
| GAAAAAAGCCTGGCATGGCC+TGG | + | 11035:18034-18053 | MS.gene07324:intron | 55.0% | |
| GCCAGGTTCATCTCCATTGC+TGG | - | 11035:18623-18642 | MS.gene07324:intergenic | 55.0% | |
| GCCGGCCTAATAGGCCAAAA+AGG | + | 11035:17937-17956 | MS.gene07324:intron | 55.0% | |
| GCCTCCTAGAGGTCCATCTT+TGG | + | 11035:16123-16142 | MS.gene07324:CDS | 55.0% | |
| GGCCGTATCAGGCTTTCAGA+AGG | - | 11035:17603-17622 | MS.gene07324:intergenic | 55.0% | |
| GTAAGCCTATGACAAGCCGC+AGG | - | 11035:17561-17580 | MS.gene07324:intergenic | 55.0% | |
| GTCGGACACTGACACGTGTT+AGG | - | 11035:18170-18189 | MS.gene07324:intergenic | 55.0% | |
| TCTGCGAGTAGTGCGTCTGT+TGG | + | 11035:18520-18539 | MS.gene07324:CDS | 55.0% | |
| ! | CGCTGCCTGTATCGGTACAT+TGG | + | 11035:16553-16572 | MS.gene07324:intron | 55.0% |
| ! | GATGGACCTCTAGGAGGCAA+AGG | - | 11035:16121-16140 | MS.gene07324:intergenic | 55.0% |
| ! | GGAGGCAAAGGTGGCTTTTG+AGG | - | 11035:16109-16128 | MS.gene07324:intergenic | 55.0% |
| ! | GGCTTTGTAAGGCTTGAGCC+TGG | + | 11035:17504-17523 | MS.gene07324:intron | 55.0% |
| ACAGGCTAGCAGGCCGTATC+AGG | - | 11035:17614-17633 | MS.gene07324:intergenic | 60.0% | |
| CCTATGGCCTAGCCTACGAC+AGG | - | 11035:18060-18079 | MS.gene07324:intergenic | 60.0% | |
| CCTGTCGTAGGCTAGGCCAT+AGG | + | 11035:18057-18076 | MS.gene07324:intron | 60.0% | |
| GCTTTCAGAAGGCCAGGCTC+AGG | - | 11035:17592-17611 | MS.gene07324:intergenic | 60.0% | |
| ! | GGACCTCTAGGAGGCAAAGG+TGG | - | 11035:16118-16137 | MS.gene07324:intergenic | 60.0% |
| ! | GGGCCGAGCTAGGCTTTGTA+AGG | + | 11035:17493-17512 | MS.gene07324:intron | 60.0% |
| ! | TTGCGTTGAGGAAGCGTGCG+AGG | + | 11035:16185-16204 | MS.gene07324:CDS | 60.0% |
| AATAGGCCAGGCCGGCCTAC+AGG | - | 11035:18085-18104 | MS.gene07324:intergenic | 65.0% | |
| ACAAGCCGCAGGCCAGGCTT+AGG | - | 11035:17550-17569 | MS.gene07324:intergenic | 65.0% | |
| ATAGGCCAGGCCGGCCTACA+GGG | - | 11035:18084-18103 | MS.gene07324:intergenic | 65.0% | |
| CCTATGACAAGCCGCAGGCC+AGG | - | 11035:17556-17575 | MS.gene07324:intergenic | 65.0% | |
| CCTGGCCTGCGGCTTGTCAT+AGG | + | 11035:17553-17572 | MS.gene07324:intron | 65.0% | |
| GAAGGCCTAAGCCTGGCCTG+CGG | + | 11035:17542-17561 | MS.gene07324:intron | 65.0% | |
| GCTAGGCCATAGGCCCCTGT+AGG | + | 11035:18067-18086 | MS.gene07324:intron | 65.0% | |
| GGAATAGGCTGGGCCGAGCT+AGG | + | 11035:17483-17502 | MS.gene07324:intron | 65.0% | |
| GGGATGGGAATAGGCCAGGC+CGG | - | 11035:18093-18112 | MS.gene07324:intergenic | 65.0% | |
| ACGACAGGCCAGGCCATGCC+AGG | - | 11035:18045-18064 | MS.gene07324:intergenic | 70.0% | |
| GGCATGGCCTGGCCTGTCGT+AGG | + | 11035:18045-18064 | MS.gene07324:intron | 70.0% | |
| GGCCATAGGCCCCTGTAGGC+CGG | + | 11035:18071-18090 | MS.gene07324:intron | 70.0% | |
| GGCCTAGCCTACGACAGGCC+AGG | - | 11035:18055-18074 | MS.gene07324:intergenic | 70.0% | |
| GGCCTGGCCTGTCGTAGGCT+AGG | + | 11035:18050-18069 | MS.gene07324:intron | 70.0% | |
| TAGGCCAGGCCGGCCTACAG+GGG | - | 11035:18083-18102 | MS.gene07324:intergenic | 70.0% | |
| GGCCGGCCTACAGGGGCCTA+TGG | - | 11035:18076-18095 | MS.gene07324:intergenic | 75.0% | |
| TAGGCCCCTGTAGGCCGGCC+TGG | + | 11035:18076-18095 | MS.gene07324:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 11035 | gene | 15779 | 18655 | 15779 | ID=MS.gene07324 |
| 11035 | mRNA | 15779 | 18655 | 15779 | ID=MS.gene07324.t1;Parent=MS.gene07324 |
| 11035 | exon | 15779 | 16328 | 15779 | ID=MS.gene07324.t1.exon1;Parent=MS.gene07324.t1 |
| 11035 | CDS | 15779 | 16328 | 15779 | ID=cds.MS.gene07324.t1;Parent=MS.gene07324.t1 |
| 11035 | exon | 18512 | 18655 | 18512 | ID=MS.gene07324.t1.exon2;Parent=MS.gene07324.t1 |
| 11035 | CDS | 18512 | 18655 | 18512 | ID=cds.MS.gene07324.t1;Parent=MS.gene07324.t1 |
| Gene Sequence |
| Protein sequence |
