Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050352.t1 | XP_013469155.1 | 94.8 | 231 | 12 | 0 | 1 | 231 | 1 | 231 | 6.30E-95 | 357.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050352.t1 | A0A072VMF3 | 94.8 | 231 | 12 | 0 | 1 | 231 | 32 | 262 | 4.5e-95 | 357.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050352 | MS.gene057684 | -0.806292 | 8.83E-50 | -1.69E-46 |
| MS.gene050352 | MS.gene07324 | 0.992669 | 1.07E-194 | -1.69E-46 |
| MS.gene050352 | MS.gene07325 | 0.978166 | 2.93E-145 | -1.69E-46 |
| MS.gene050352 | MS.gene09934 | 0.804657 | 1.94E-49 | -1.69E-46 |
| MS.gene050352 | MS.gene20874 | 0.975374 | 7.78E-140 | -1.69E-46 |
| MS.gene050352 | MS.gene28918 | 0.809061 | 2.28E-50 | -1.69E-46 |
| MS.gene050352 | MS.gene31169 | 0.806165 | 9.39E-50 | -1.69E-46 |
| MS.gene050352 | MS.gene33650 | 0.800217 | 1.60E-48 | -1.69E-46 |
| MS.gene050352 | MS.gene39903 | 0.829399 | 5.26E-55 | -1.69E-46 |
| MS.gene050352 | MS.gene45478 | 0.808944 | 2.41E-50 | -1.69E-46 |
| MS.gene050352 | MS.gene48348 | 0.808457 | 3.07E-50 | -1.69E-46 |
| MS.gene050352 | MS.gene50585 | 0.834374 | 3.11E-56 | -1.69E-46 |
| MS.gene050352 | MS.gene64071 | 0.812798 | 3.54E-51 | -1.69E-46 |
| MS.gene050352 | MS.gene71891 | -0.814923 | 1.20E-51 | -1.69E-46 |
| MS.gene050352 | MS.gene73883 | 0.811189 | 7.93E-51 | -1.69E-46 |
| MS.gene050352 | MS.gene73885 | 0.816651 | 4.96E-52 | -1.69E-46 |
| MS.gene050352 | MS.gene91485 | 0.809117 | 2.22E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050352.t1 | MTR_1g086670 | 97.835 | 231 | 5 | 0 | 1 | 231 | 1 | 231 | 6.06e-168 | 462 |
| MS.gene050352.t1 | MTR_1g086670 | 97.835 | 231 | 5 | 0 | 1 | 231 | 32 | 262 | 7.27e-168 | 463 |
| MS.gene050352.t1 | MTR_2g033650 | 40.807 | 223 | 105 | 7 | 9 | 229 | 7 | 204 | 5.40e-31 | 114 |
| MS.gene050352.t1 | MTR_4g122710 | 33.816 | 207 | 132 | 3 | 14 | 219 | 12 | 214 | 2.01e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050352.t1 | AT1G02380 | 34.404 | 218 | 106 | 8 | 10 | 218 | 8 | 197 | 7.88e-27 | 103 |
| MS.gene050352.t1 | AT3G17120 | 43.860 | 114 | 62 | 2 | 112 | 224 | 78 | 190 | 5.45e-18 | 79.7 |
| MS.gene050352.t1 | AT3G17120 | 43.860 | 114 | 62 | 2 | 112 | 224 | 78 | 190 | 5.45e-18 | 79.7 |
| MS.gene050352.t1 | AT3G17120 | 43.860 | 114 | 62 | 2 | 112 | 224 | 78 | 190 | 5.45e-18 | 79.7 |
| MS.gene050352.t1 | AT3G17120 | 43.860 | 114 | 62 | 2 | 112 | 224 | 78 | 190 | 5.45e-18 | 79.7 |
| MS.gene050352.t1 | AT3G17120 | 43.860 | 114 | 62 | 2 | 112 | 224 | 78 | 190 | 5.45e-18 | 79.7 |
| MS.gene050352.t1 | AT4G01960 | 29.493 | 217 | 125 | 7 | 9 | 218 | 8 | 203 | 6.48e-18 | 80.1 |
| MS.gene050352.t1 | AT4G01960 | 29.493 | 217 | 125 | 7 | 9 | 218 | 8 | 203 | 6.48e-18 | 80.1 |
| MS.gene050352.t1 | AT4G01960 | 30.270 | 185 | 98 | 7 | 9 | 184 | 8 | 170 | 5.86e-15 | 71.2 |
Find 0 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTCATAATTACTTAAAT+AGG | + | 11037:17856-17875 | MS.gene050352:intron | 10.0% |
| !! | AAAAAGTAAAAAGTTTGTAT+AGG | - | 11037:16847-16866 | None:intergenic | 15.0% |
| !!! | TCGTTTTTTCAAATTATTAT+CGG | + | 11037:18151-18170 | MS.gene050352:intron | 15.0% |
| !! | AATACAAAAGATTACGTATA+TGG | - | 11037:16418-16437 | None:intergenic | 20.0% |
| !! | ACCACAATGAAAATTTATAA+AGG | - | 11037:17320-17339 | None:intergenic | 20.0% |
| !! | TAAAGATGTTCATATGAAAT+AGG | - | 11037:17585-17604 | None:intergenic | 20.0% |
| !! | TACAAATACAATTGAATTCT+AGG | - | 11037:16637-16656 | None:intergenic | 20.0% |
| !!! | TCCTTTATAAATTTTCATTG+TGG | + | 11037:17316-17335 | MS.gene050352:intron | 20.0% |
| !!! | TTACTTTTTCAACTCTTATA+AGG | + | 11037:16858-16877 | MS.gene050352:intron | 20.0% |
| ! | AATTTAGATGGATCAGAAAA+GGG | + | 11037:15867-15886 | MS.gene050352:CDS | 25.0% |
| ! | CGAATGTACATTATATCATA+AGG | + | 11037:17139-17158 | MS.gene050352:intron | 25.0% |
| ! | GAAATGATTATTCAGTATCA+GGG | - | 11037:17091-17110 | None:intergenic | 25.0% |
| ! | GTTCATATATATTTCACATG+CGG | + | 11037:16521-16540 | MS.gene050352:intron | 25.0% |
| ! | TCAAAGAGAAAAAGAAAAAG+AGG | + | 11037:15734-15753 | MS.gene050352:CDS | 25.0% |
| ! | TCAGTTAATTCAAACTCAAT+TGG | + | 11037:18330-18349 | MS.gene050352:intron | 25.0% |
| ! | TCATAATTACTTAAATAGGC+CGG | + | 11037:17860-17879 | MS.gene050352:intron | 25.0% |
| ! | TGAAATGATTATTCAGTATC+AGG | - | 11037:17092-17111 | None:intergenic | 25.0% |
| !! | AAAAGCCTATTTAGCTTAAT+AGG | - | 11037:17928-17947 | None:intergenic | 25.0% |
| !! | AAAGGTTTAGAACATGTTAA+TGG | + | 11037:15981-16000 | MS.gene050352:CDS | 25.0% |
| !! | AAATTACATGTTCTTTTGCT+GGG | + | 11037:16272-16291 | MS.gene050352:intron | 25.0% |
| !! | ATAATCAACATGAGTTTTCA+GGG | + | 11037:17675-17694 | MS.gene050352:intron | 25.0% |
| !! | TAAATTACATGTTCTTTTGC+TGG | + | 11037:16271-16290 | MS.gene050352:intron | 25.0% |
| !! | TATGAAATAGGCTTTTAAAC+AGG | - | 11037:17573-17592 | None:intergenic | 25.0% |
| !! | TCAAATTCTTGTGATGTTTT+TGG | + | 11037:15924-15943 | MS.gene050352:CDS | 25.0% |
| !! | TGAATGTAATCTAGAATTGT+TGG | + | 11037:15953-15972 | MS.gene050352:CDS | 25.0% |
| !!! | GCTTTTTTCTTAAATAGAGA+AGG | - | 11037:17964-17983 | None:intergenic | 25.0% |
| !!! | TAGTTGTTTTATAGCTATGA+GGG | + | 11037:17061-17080 | MS.gene050352:intron | 25.0% |
| !!! | TTAGTTGTTTTATAGCTATG+AGG | + | 11037:17060-17079 | MS.gene050352:intron | 25.0% |
| !!! | TTTTGAAATCAAATCTGCAT+AGG | + | 11037:16905-16924 | MS.gene050352:intron | 25.0% |
| AAAGAATATCAACAAGTCCT+TGG | - | 11037:17273-17292 | None:intergenic | 30.0% | |
| AATGGGGTTATGAATTTAGA+TGG | + | 11037:15855-15874 | MS.gene050352:CDS | 30.0% | |
| AGAGATTCAACTTCAAAGAA+TGG | + | 11037:15816-15835 | MS.gene050352:CDS | 30.0% | |
| AGATATAGAGGATATCACTT+GGG | + | 11037:16798-16817 | MS.gene050352:intron | 30.0% | |
| ATATACAAATCTTTCTGCCA+TGG | + | 11037:16208-16227 | MS.gene050352:CDS | 30.0% | |
| CATATGCTTACATCTCAAAT+TGG | + | 11037:16385-16404 | MS.gene050352:intron | 30.0% | |
| CTCTATTTAAGAAAAAAGCC+TGG | + | 11037:17965-17984 | MS.gene050352:intron | 30.0% | |
| CTTAAGATTGATGTTAGTTG+TGG | - | 11037:16720-16739 | None:intergenic | 30.0% | |
| GAAAAAAATAGTGATGACCA+TGG | - | 11037:16228-16247 | None:intergenic | 30.0% | |
| GAACATGTTAATGGAAATCA+TGG | + | 11037:15990-16009 | MS.gene050352:CDS | 30.0% | |
| GAATTTAGATGGATCAGAAA+AGG | + | 11037:15866-15885 | MS.gene050352:CDS | 30.0% | |
| GTAATTCACAATTACAGAAG+TGG | - | 11037:17199-17218 | None:intergenic | 30.0% | |
| GTTGAATTTGACATTGAAAG+TGG | + | 11037:15756-15775 | MS.gene050352:CDS | 30.0% | |
| TAGATATAGAGGATATCACT+TGG | + | 11037:16797-16816 | MS.gene050352:intron | 30.0% | |
| TAGTCATCACATAGATATAG+AGG | + | 11037:16786-16805 | MS.gene050352:intron | 30.0% | |
| TCATTTCACATTATACAGAG+TGG | + | 11037:17104-17123 | MS.gene050352:intron | 30.0% | |
| TCTATATCTATGTGATGACT+AGG | - | 11037:16787-16806 | None:intergenic | 30.0% | |
| TGATATAGAACACAAGAATC+AGG | - | 11037:16583-16602 | None:intergenic | 30.0% | |
| TGGTGATCATAAATTTGTGA+AGG | + | 11037:16091-16110 | MS.gene050352:CDS | 30.0% | |
| TGTGTTTCATAGAGGATAAT+TGG | + | 11037:18218-18237 | MS.gene050352:intron | 30.0% | |
| TGTTCAATCAAGATTGAAGA+AGG | - | 11037:17221-17240 | None:intergenic | 30.0% | |
| TTAGTTAAGACTTTCCTTTC+AGG | + | 11037:18431-18450 | MS.gene050352:intron | 30.0% | |
| TTCTGCTACATCTCAAAATA+TGG | + | 11037:16678-16697 | MS.gene050352:intron | 30.0% | |
| TTTATCCTTATCGTTGCATA+GGG | - | 11037:18054-18073 | None:intergenic | 30.0% | |
| ! | AATTCTTGTGTTAAGTTGCA+AGG | + | 11037:16608-16627 | MS.gene050352:intron | 30.0% |
| ! | ATGTAATCTAGAATTGTTGG+TGG | + | 11037:15956-15975 | MS.gene050352:CDS | 30.0% |
| ! | GATAATCAACATGAGTTTTC+AGG | + | 11037:17674-17693 | MS.gene050352:intron | 30.0% |
| !! | ATAGGCTTTTAAAAAAGCCT+AGG | + | 11037:17938-17957 | MS.gene050352:intron | 30.0% |
| !! | ATTATACAGAGTGGATTTTG+TGG | + | 11037:17113-17132 | MS.gene050352:intron | 30.0% |
| !!! | TTGTCATAGGCTTACTTTTT+AGG | + | 11037:17507-17526 | MS.gene050352:intron | 30.0% |
| ACTACTTTGTTGAAGTGGAT+GGG | + | 11037:17403-17422 | MS.gene050352:intron | 35.0% | |
| CAATGTCAGATGAGTTTGAT+AGG | - | 11037:18274-18293 | None:intergenic | 35.0% | |
| CATTTGTCTTGAATCTGCAA+TGG | + | 11037:17029-17048 | MS.gene050352:intron | 35.0% | |
| GATATAGAGGATATCACTTG+GGG | + | 11037:16799-16818 | MS.gene050352:intron | 35.0% | |
| GCATAAAGGACACTAACATA+TGG | + | 11037:17376-17395 | MS.gene050352:intron | 35.0% | |
| GGATCAGAAAAGGGTAAAAA+TGG | + | 11037:15876-15895 | MS.gene050352:CDS | 35.0% | |
| GTCCTTTATGCTACAACTTT+AGG | - | 11037:17367-17386 | None:intergenic | 35.0% | |
| GTGTTGAATGTAACATGTGT+CGG | - | 11037:18129-18148 | None:intergenic | 35.0% | |
| GTTTATCCTTATCGTTGCAT+AGG | - | 11037:18055-18074 | None:intergenic | 35.0% | |
| TACTACTTTGTTGAAGTGGA+TGG | + | 11037:17402-17421 | MS.gene050352:intron | 35.0% | |
| TAGAGGATAATTGGATGTCT+AGG | + | 11037:18227-18246 | MS.gene050352:intron | 35.0% | |
| TGCTGTAATCAATGCTCATT+TGG | + | 11037:16308-16327 | MS.gene050352:intron | 35.0% | |
| TTCCTCGTCATCATATTTCA+CGG | + | 11037:16248-16267 | MS.gene050352:CDS | 35.0% | |
| TTCTTAAATAGAGAAGGCCT+AGG | - | 11037:17958-17977 | None:intergenic | 35.0% | |
| TTTAAGAAAAAAGCCTGGCA+TGG | + | 11037:17970-17989 | MS.gene050352:intron | 35.0% | |
| TTTGTATATGTCGAAGACGA+CGG | - | 11037:16197-16216 | None:intergenic | 35.0% | |
| ! | ACAGCTTCAATCAAAAGTGT+AGG | - | 11037:18087-18106 | None:intergenic | 35.0% |
| ! | AGCCATTCAAAAAGCCTTTT+TGG | - | 11037:17895-17914 | None:intergenic | 35.0% |
| ! | CTAGAATTGTTGGTGGATAA+AGG | + | 11037:15963-15982 | MS.gene050352:CDS | 35.0% |
| ! | CTTCAAAGAATGGTTTTCCT+TGG | + | 11037:15826-15845 | MS.gene050352:CDS | 35.0% |
| ! | GCTTAGGCCTTCTAAAAAAT+TGG | - | 11037:17475-17494 | None:intergenic | 35.0% |
| !! | AAAAGCCTTTTTGGCCTATT+AGG | - | 11037:17886-17905 | None:intergenic | 35.0% |
| !! | TGAGCATTGATTACAGCATA+TGG | - | 11037:16306-16325 | None:intergenic | 35.0% |
| AGTAACTTACTACAGTGCCA+AGG | + | 11037:17253-17272 | MS.gene050352:intron | 40.0% | |
| CCTGGCCTATTAAGCTAAAT+AGG | + | 11037:17920-17939 | MS.gene050352:intron | 40.0% | |
| GGCCTAAAGTTGTAGCATAA+AGG | + | 11037:17362-17381 | MS.gene050352:intron | 40.0% | |
| GTCGTACTACTTTGTTGAAG+TGG | + | 11037:17398-17417 | MS.gene050352:intron | 40.0% | |
| TCCATGTCTGTGTTTCATAG+AGG | + | 11037:18210-18229 | MS.gene050352:intron | 40.0% | |
| TCCTCTATGAAACACAGACA+TGG | - | 11037:18214-18233 | None:intergenic | 40.0% | |
| TCGCAGATTTGATTCCTGAA+AGG | - | 11037:18448-18467 | None:intergenic | 40.0% | |
| TTGTTGAAGTGGATGGGAAT+AGG | + | 11037:17409-17428 | MS.gene050352:intron | 40.0% | |
| ! | AAGGCTTTTTGAATGGCTTG+TGG | + | 11037:17897-17916 | MS.gene050352:intron | 40.0% |
| ! | AGAATGGTTTTCCTTGGTCA+TGG | + | 11037:15832-15851 | MS.gene050352:CDS | 40.0% |
| ! | AGGCCTTCTAAAAAATTGGC+AGG | - | 11037:17471-17490 | None:intergenic | 40.0% |
| ! | CCTATTTAGCTTAATAGGCC+AGG | - | 11037:17923-17942 | None:intergenic | 40.0% |
| ! | GGCCAAAAAGGCTTTTTGAA+TGG | + | 11037:17890-17909 | MS.gene050352:intron | 40.0% |
| ! | GTTTTCCTTGGTCATGGAAT+GGG | + | 11037:15838-15857 | MS.gene050352:CDS | 40.0% |
| ! | TACCGTGAAATATGATGACG+AGG | - | 11037:16253-16272 | None:intergenic | 40.0% |
| ! | TGTTGTCTTTCTGCTCTGAA+AGG | + | 11037:17340-17359 | MS.gene050352:intron | 40.0% |
| ! | TTCTAAAAAATTGGCAGGCC+AGG | - | 11037:17466-17485 | None:intergenic | 40.0% |
| ! | TTTTCCTTGGTCATGGAATG+GGG | + | 11037:15839-15858 | MS.gene050352:CDS | 40.0% |
| !! | GTTGTCTTTCTGCTCTGAAA+GGG | + | 11037:17341-17360 | MS.gene050352:intron | 40.0% |
| !!! | TGGCCTGCCAATTTTTTAGA+AGG | + | 11037:17465-17484 | MS.gene050352:intron | 40.0% |
| !!! | TTTTTTAGAAGGCCTAAGCC+TGG | + | 11037:17476-17495 | MS.gene050352:intron | 40.0% |
| AAGCCTTACAAAGCCTAGCT+CGG | - | 11037:17440-17459 | None:intergenic | 45.0% | |
| AATTAGCTGAGCTTGCGTTG+AGG | + | 11037:16114-16133 | MS.gene050352:CDS | 45.0% | |
| ACGAACTTCAACACCAGCAA+TGG | + | 11037:18548-18567 | MS.gene050352:CDS | 45.0% | |
| ACGACACGACACTAACACAT+CGG | - | 11037:18179-18198 | None:intergenic | 45.0% | |
| ATAACCCCATTCCATGACCA+AGG | - | 11037:15846-15865 | None:intergenic | 45.0% | |
| CATGCGGCTCTTCTAACATT+TGG | + | 11037:16537-16556 | MS.gene050352:intron | 45.0% | |
| CCTTATCGTTGCATAGGGAT+GGG | - | 11037:18049-18068 | None:intergenic | 45.0% | |
| CTTAAATAGGCCGGCCTAAT+AGG | + | 11037:17869-17888 | MS.gene050352:intron | 45.0% | |
| TCCTTATCGTTGCATAGGGA+TGG | - | 11037:18050-18069 | None:intergenic | 45.0% | |
| TGATCACCAGCATCCAAAGA+TGG | - | 11037:16080-16099 | None:intergenic | 45.0% | |
| ! | AGGCTTTTAAACAGGCTAGC+AGG | - | 11037:17565-17584 | None:intergenic | 45.0% |
| ! | GGTTTTCCTTGGTCATGGAA+TGG | + | 11037:15837-15856 | MS.gene050352:CDS | 45.0% |
| ! | TTGCTGGTGTTGAAGTTCGT+AGG | - | 11037:18548-18567 | None:intergenic | 45.0% |
| !! | TTTTTGAATGGCTTGTGGCC+TGG | + | 11037:17902-17921 | MS.gene050352:intron | 45.0% |
| !!! | TTACTTTTTAGGCCTGAGCC+TGG | + | 11037:17518-17537 | MS.gene050352:intron | 45.0% |
| ACCAGCAATGGAGATGAACC+TGG | + | 11037:18560-18579 | MS.gene050352:CDS | 50.0% | |
| AGAGGTCCATCTTTGGATGC+TGG | + | 11037:16071-16090 | MS.gene050352:CDS | 50.0% | |
| CCCATCCCTATGCAACGATA+AGG | + | 11037:18046-18065 | MS.gene050352:intron | 50.0% | |
| CGTTGCATAGGGATGGGAAT+AGG | - | 11037:18043-18062 | None:intergenic | 50.0% | |
| GAAGTGGATGGGAATAGGCT+GGG | + | 11037:17414-17433 | MS.gene050352:intron | 50.0% | |
| GCATCCAAAGATGGACCTCT+AGG | - | 11037:16071-16090 | None:intergenic | 50.0% | |
| TAGCATAGCGCTGCCTGTAT+CGG | + | 11037:16486-16505 | MS.gene050352:intron | 50.0% | |
| TAGTGTCGTGTCGTCGTGTT+AGG | + | 11037:18185-18204 | MS.gene050352:intron | 50.0% | |
| TATCAGGCTTTCAGAAGGCC+AGG | - | 11037:17539-17558 | None:intergenic | 50.0% | |
| TCAGCTGTTGCATCAGACGA+AGG | + | 11037:18503-18522 | MS.gene050352:CDS | 50.0% | |
| TCCAAAGATGGACCTCTAGG+AGG | - | 11037:16068-16087 | None:intergenic | 50.0% | |
| TGAAGTGGATGGGAATAGGC+TGG | + | 11037:17413-17432 | MS.gene050352:intron | 50.0% | |
| TGGTGAAAACACGAGCGAAG+AGG | + | 11037:15776-15795 | MS.gene050352:CDS | 50.0% | |
| ! | CCAAGCCAATGTACCGATAC+AGG | - | 11037:16502-16521 | None:intergenic | 50.0% |
| ! | CCTGTATCGGTACATTGGCT+TGG | + | 11037:16499-16518 | MS.gene050352:intron | 50.0% |
| ! | CTGATGCAACAGCTGACTCA+GGG | - | 11037:18499-18518 | None:intergenic | 50.0% |
| ! | GGCCTTCTGAAAGCCTGATA+CGG | + | 11037:17539-17558 | MS.gene050352:intron | 50.0% |
| ! | TCTGATGCAACAGCTGACTC+AGG | - | 11037:18500-18519 | None:intergenic | 50.0% |
| ! | TGATGCAACAGCTGACTCAG+GGG | - | 11037:18498-18517 | None:intergenic | 50.0% |
| !! | GCCTTTTTGGCCTATTAGGC+CGG | - | 11037:17882-17901 | None:intergenic | 50.0% |
| !!! | GGTGGCTTTTGAGGCTTTCT+TGG | - | 11037:16041-16060 | None:intergenic | 50.0% |
| AAGCCACCTTTGCCTCCTAG+AGG | + | 11037:16053-16072 | MS.gene050352:CDS | 55.0% | |
| CATAGGGATGGGAATAGGCC+AGG | - | 11037:18038-18057 | None:intergenic | 55.0% | |
| CTGCGAGTAGTGCGTCTGTT+GGG | + | 11037:18462-18481 | MS.gene050352:CDS | 55.0% | |
| GAAAAAAGCCTGGCATGGCC+TGG | + | 11037:17975-17994 | MS.gene050352:intron | 55.0% | |
| GCCAGGTTCATCTCCATTGC+TGG | - | 11037:18564-18583 | None:intergenic | 55.0% | |
| GCCGGCCTAATAGGCCAAAA+AGG | + | 11037:17878-17897 | MS.gene050352:intron | 55.0% | |
| GCCTCCTAGAGGTCCATCTT+TGG | + | 11037:16064-16083 | MS.gene050352:CDS | 55.0% | |
| GGCCGTATCAGGCTTTCAGA+AGG | - | 11037:17544-17563 | None:intergenic | 55.0% | |
| GTAAGCCTATGACAAGCCGC+AGG | - | 11037:17502-17521 | None:intergenic | 55.0% | |
| GTCGGACACTGACACGTGTT+AGG | - | 11037:18111-18130 | None:intergenic | 55.0% | |
| TCTGCGAGTAGTGCGTCTGT+TGG | + | 11037:18461-18480 | MS.gene050352:CDS | 55.0% | |
| ! | CGCTGCCTGTATCGGTACAT+TGG | + | 11037:16494-16513 | MS.gene050352:intron | 55.0% |
| ! | GATGGACCTCTAGGAGGCAA+AGG | - | 11037:16062-16081 | None:intergenic | 55.0% |
| ! | GGAGGCAAAGGTGGCTTTTG+AGG | - | 11037:16050-16069 | None:intergenic | 55.0% |
| ! | GGCTTTGTAAGGCTTGAGCC+TGG | + | 11037:17445-17464 | MS.gene050352:intron | 55.0% |
| ACAGGCTAGCAGGCCGTATC+AGG | - | 11037:17555-17574 | None:intergenic | 60.0% | |
| CCTATGGCCTAGCCTACGAC+AGG | - | 11037:18001-18020 | None:intergenic | 60.0% | |
| CCTGTCGTAGGCTAGGCCAT+AGG | + | 11037:17998-18017 | MS.gene050352:intron | 60.0% | |
| GCTTTCAGAAGGCCAGGCTC+AGG | - | 11037:17533-17552 | None:intergenic | 60.0% | |
| ! | GGACCTCTAGGAGGCAAAGG+TGG | - | 11037:16059-16078 | None:intergenic | 60.0% |
| ! | GGGCCGAGCTAGGCTTTGTA+AGG | + | 11037:17434-17453 | MS.gene050352:intron | 60.0% |
| ! | TTGCGTTGAGGAAGCGTGCG+AGG | + | 11037:16126-16145 | MS.gene050352:CDS | 60.0% |
| AATAGGCCAGGCCGGCCTAC+AGG | - | 11037:18026-18045 | None:intergenic | 65.0% | |
| ACAAGCCGCAGGCCAGGCTT+AGG | - | 11037:17491-17510 | None:intergenic | 65.0% | |
| ATAGGCCAGGCCGGCCTACA+GGG | - | 11037:18025-18044 | None:intergenic | 65.0% | |
| CCTATGACAAGCCGCAGGCC+AGG | - | 11037:17497-17516 | None:intergenic | 65.0% | |
| CCTGGCCTGCGGCTTGTCAT+AGG | + | 11037:17494-17513 | MS.gene050352:intron | 65.0% | |
| GAAGGCCTAAGCCTGGCCTG+CGG | + | 11037:17483-17502 | MS.gene050352:intron | 65.0% | |
| GCTAGGCCATAGGCCCCTGT+AGG | + | 11037:18008-18027 | MS.gene050352:intron | 65.0% | |
| GGAATAGGCTGGGCCGAGCT+AGG | + | 11037:17424-17443 | MS.gene050352:intron | 65.0% | |
| GGGATGGGAATAGGCCAGGC+CGG | - | 11037:18034-18053 | None:intergenic | 65.0% | |
| ACGACAGGCCAGGCCATGCC+AGG | - | 11037:17986-18005 | None:intergenic | 70.0% | |
| GGCATGGCCTGGCCTGTCGT+AGG | + | 11037:17986-18005 | MS.gene050352:intron | 70.0% | |
| GGCCATAGGCCCCTGTAGGC+CGG | + | 11037:18012-18031 | MS.gene050352:intron | 70.0% | |
| GGCCTAGCCTACGACAGGCC+AGG | - | 11037:17996-18015 | None:intergenic | 70.0% | |
| GGCCTGGCCTGTCGTAGGCT+AGG | + | 11037:17991-18010 | MS.gene050352:intron | 70.0% | |
| TAGGCCAGGCCGGCCTACAG+GGG | - | 11037:18024-18043 | None:intergenic | 70.0% | |
| GGCCGGCCTACAGGGGCCTA+TGG | - | 11037:18017-18036 | None:intergenic | 75.0% | |
| TAGGCCCCTGTAGGCCGGCC+TGG | + | 11037:18017-18036 | MS.gene050352:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 11037 | gene | 15720 | 18596 | 15720 | ID=MS.gene050352 |
| 11037 | mRNA | 15720 | 18596 | 15720 | ID=MS.gene050352.t1;Parent=MS.gene050352 |
| 11037 | exon | 15720 | 16269 | 15720 | ID=MS.gene050352.t1.exon1;Parent=MS.gene050352.t1 |
| 11037 | CDS | 15720 | 16269 | 15720 | ID=cds.MS.gene050352.t1;Parent=MS.gene050352.t1 |
| 11037 | exon | 18453 | 18596 | 18453 | ID=MS.gene050352.t1.exon2;Parent=MS.gene050352.t1 |
| 11037 | CDS | 18453 | 18596 | 18453 | ID=cds.MS.gene050352.t1;Parent=MS.gene050352.t1 |
| Gene Sequence |
| Protein sequence |
