Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073322.t1 | KEH44060.1 | 86.6 | 842 | 111 | 2 | 1 | 842 | 60 | 899 | 0.00E+00 | 1538.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073322.t1 | Q8L7W8 | 63.7 | 824 | 266 | 7 | 26 | 840 | 44 | 843 | 0.0e+00 | 1100.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073322.t1 | A0A072W198 | 86.6 | 842 | 111 | 2 | 1 | 842 | 60 | 899 | 0.0e+00 | 1538.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050504 | MS.gene073322 | 0.80338 | 3.58E-49 | -1.69E-46 |
MS.gene054954 | MS.gene073322 | 0.806579 | 7.68E-50 | -1.69E-46 |
MS.gene058183 | MS.gene073322 | 0.810344 | 1.21E-50 | -1.69E-46 |
MS.gene059034 | MS.gene073322 | 0.815645 | 8.31E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073322.t1 | MTR_1g107135 | 86.580 | 842 | 111 | 2 | 1 | 842 | 60 | 899 | 0.0 | 1533 |
MS.gene073322.t1 | MTR_4g127370 | 83.206 | 917 | 87 | 8 | 1 | 917 | 1 | 850 | 0.0 | 1498 |
MS.gene073322.t1 | MTR_4g127370 | 59.649 | 114 | 44 | 1 | 876 | 987 | 740 | 853 | 3.11e-31 | 132 |
MS.gene073322.t1 | MTR_4g127360 | 96.154 | 78 | 3 | 0 | 910 | 987 | 38 | 115 | 1.57e-45 | 159 |
MS.gene073322.t1 | MTR_4g127360 | 73.333 | 75 | 20 | 0 | 843 | 917 | 38 | 112 | 4.58e-29 | 112 |
MS.gene073322.t1 | MTR_4g014040 | 65.672 | 67 | 23 | 0 | 843 | 909 | 38 | 104 | 3.05e-24 | 99.4 |
MS.gene073322.t1 | MTR_4g014040 | 56.716 | 67 | 29 | 0 | 910 | 976 | 38 | 104 | 5.46e-20 | 87.0 |
MS.gene073322.t1 | MTR_4g014040 | 65.672 | 67 | 23 | 0 | 843 | 909 | 38 | 104 | 1.17e-23 | 97.4 |
MS.gene073322.t1 | MTR_4g014040 | 56.410 | 78 | 34 | 0 | 910 | 987 | 38 | 115 | 1.71e-23 | 96.7 |
MS.gene073322.t1 | MTR_4g014040 | 65.672 | 67 | 23 | 0 | 843 | 909 | 38 | 104 | 5.72e-23 | 97.1 |
MS.gene073322.t1 | MTR_4g014040 | 55.714 | 70 | 31 | 0 | 910 | 979 | 38 | 107 | 4.28e-20 | 88.6 |
MS.gene073322.t1 | MTR_7g059460 | 56.250 | 80 | 33 | 2 | 843 | 921 | 38 | 116 | 5.06e-21 | 90.1 |
MS.gene073322.t1 | MTR_7g059460 | 42.593 | 108 | 48 | 1 | 877 | 984 | 19 | 112 | 1.03e-20 | 89.0 |
MS.gene073322.t1 | MTR_7g059460 | 42.593 | 108 | 47 | 2 | 877 | 983 | 19 | 112 | 4.65e-20 | 87.0 |
MS.gene073322.t1 | MTR_7g059460 | 58.209 | 67 | 28 | 0 | 843 | 909 | 38 | 104 | 9.53e-20 | 86.3 |
MS.gene073322.t1 | MTR_1g107145 | 74.545 | 55 | 13 | 1 | 21 | 75 | 56 | 109 | 3.34e-19 | 85.1 |
MS.gene073322.t1 | MTR_7g070250 | 49.254 | 67 | 34 | 0 | 842 | 908 | 37 | 103 | 4.88e-16 | 75.5 |
MS.gene073322.t1 | MTR_7g070250 | 42.424 | 66 | 38 | 0 | 909 | 974 | 37 | 102 | 1.96e-12 | 65.1 |
MS.gene073322.t1 | MTR_4g013730 | 47.761 | 67 | 35 | 0 | 842 | 908 | 37 | 103 | 7.18e-16 | 75.1 |
MS.gene073322.t1 | MTR_4g013730 | 43.939 | 66 | 37 | 0 | 909 | 974 | 37 | 102 | 8.38e-14 | 69.3 |
MS.gene073322.t1 | MTR_0562s0020 | 47.761 | 67 | 35 | 0 | 842 | 908 | 37 | 103 | 7.18e-16 | 75.1 |
MS.gene073322.t1 | MTR_0562s0020 | 43.939 | 66 | 37 | 0 | 909 | 974 | 37 | 102 | 8.38e-14 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073322.t1 | AT4G34260 | 63.714 | 824 | 266 | 7 | 26 | 840 | 44 | 843 | 0.0 | 1099 |
MS.gene073322.t1 | AT5G57170 | 87.879 | 66 | 8 | 0 | 843 | 908 | 38 | 103 | 8.57e-32 | 120 |
MS.gene073322.t1 | AT5G57170 | 70.513 | 78 | 23 | 0 | 910 | 987 | 38 | 115 | 1.63e-29 | 114 |
MS.gene073322.t1 | AT5G57170 | 87.879 | 66 | 8 | 0 | 843 | 908 | 38 | 103 | 2.72e-31 | 119 |
MS.gene073322.t1 | AT5G57170 | 73.846 | 65 | 17 | 0 | 910 | 974 | 38 | 102 | 1.62e-24 | 99.8 |
MS.gene073322.t1 | AT5G01650 | 62.687 | 67 | 25 | 0 | 843 | 909 | 38 | 104 | 1.98e-23 | 96.7 |
MS.gene073322.t1 | AT5G01650 | 42.157 | 102 | 45 | 1 | 877 | 978 | 19 | 106 | 4.91e-20 | 87.0 |
MS.gene073322.t1 | AT5G01650 | 53.846 | 78 | 36 | 0 | 910 | 987 | 38 | 115 | 2.10e-23 | 96.7 |
MS.gene073322.t1 | AT5G01650 | 62.687 | 67 | 25 | 0 | 843 | 909 | 38 | 104 | 5.99e-23 | 95.5 |
MS.gene073322.t1 | AT5G01650 | 62.687 | 67 | 25 | 0 | 843 | 909 | 38 | 104 | 2.95e-23 | 96.3 |
MS.gene073322.t1 | AT5G01650 | 53.731 | 67 | 31 | 0 | 910 | 976 | 38 | 104 | 2.94e-19 | 85.1 |
MS.gene073322.t1 | AT5G01650 | 62.687 | 67 | 25 | 0 | 843 | 909 | 38 | 104 | 2.95e-23 | 96.3 |
MS.gene073322.t1 | AT5G01650 | 53.731 | 67 | 31 | 0 | 910 | 976 | 38 | 104 | 2.94e-19 | 85.1 |
MS.gene073322.t1 | AT3G51660 | 43.750 | 64 | 36 | 0 | 844 | 907 | 39 | 102 | 1.69e-11 | 62.4 |
Find 235 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCCGGCTGTTTGGGCTTTA+TGG | 0.123213 | 8.1:+5742533 | MS.gene073322:CDS |
CACATCATGTTTCTGACTTA+TGG | 0.130042 | 8.1:+5742488 | MS.gene073322:CDS |
CTGCATTGCCTCAGGATAAA+TGG | 0.175416 | 8.1:+5744481 | MS.gene073322:CDS |
TAAATCTTCAAATGAATTAT+TGG | 0.184612 | 8.1:+5742026 | MS.gene073322:CDS |
CATATCGAGGTCCGGCTGTT+TGG | 0.210487 | 8.1:+5742524 | MS.gene073322:CDS |
CATCTGTTTGGCTTGTTTCC+GGG | 0.217239 | 8.1:+5743741 | MS.gene073322:CDS |
GTAGTCTCATTTCGGAATTC+TGG | 0.218207 | 8.1:-5744605 | None:intergenic |
ATTATCATTTACAGTATCTT+TGG | 0.233665 | 8.1:+5741109 | MS.gene073322:CDS |
AAAAGGAGTTATACATGTTT+TGG | 0.239754 | 8.1:+5741289 | MS.gene073322:CDS |
CGGACTTCAGCCAGCGCTTC+AGG | 0.247003 | 8.1:-5738283 | None:intergenic |
ACATCTGTTTGGCTTGTTTC+CGG | 0.252622 | 8.1:+5743740 | MS.gene073322:CDS |
CCCTCATTTGTTGGGTTCAA+TGG | 0.255846 | 8.1:+5749316 | MS.gene073322:CDS |
CCTGGCTTTGTACCCATCTA+TGG | 0.266873 | 8.1:+5742569 | MS.gene073322:CDS |
ATTTCAGTATATGTGTATTT+TGG | 0.269503 | 8.1:+5749001 | MS.gene073322:intron |
TGAAGGCCCTGGTGGATTAT+TGG | 0.270391 | 8.1:+5743196 | MS.gene073322:CDS |
TGCTAGGGATGGATCAATTA+TGG | 0.289988 | 8.1:+5743511 | MS.gene073322:CDS |
ACAGCTTCCTCGTCGTTTGA+TGG | 0.292756 | 8.1:+5741362 | MS.gene073322:CDS |
ACATCATGTTTCTGACTTAT+GGG | 0.293372 | 8.1:+5742489 | MS.gene073322:CDS |
AAGTTTACTCGTATAATAAT+TGG | 0.298944 | 8.1:+5744670 | MS.gene073322:CDS |
ACAAAGATGTTGTGCCTAAA+TGG | 0.300498 | 8.1:+5741777 | MS.gene073322:CDS |
CAAACAGCCGGACCTCGATA+TGG | 0.301359 | 8.1:-5742523 | None:intergenic |
ACCCAAAGTTCGCATCAATT+TGG | 0.302956 | 8.1:-5744295 | None:intergenic |
TCGTCTTGGTGCCATGATTT+GGG | 0.304806 | 8.1:+5737920 | MS.gene073322:CDS |
AGGTTTGCCACCTGAGTTCC+AGG | 0.326926 | 8.1:-5741740 | None:intergenic |
ATATCGAGGTCCGGCTGTTT+GGG | 0.333008 | 8.1:+5742525 | MS.gene073322:CDS |
CTGATATCAATTGGCGGACT+TGG | 0.336187 | 8.1:+5746153 | MS.gene073322:CDS |
TGTATACAGCCCTCATTTGT+TGG | 0.340070 | 8.1:+5749307 | MS.gene073322:intron |
GTCGTCTTGGTGCCATGATT+TGG | 0.342453 | 8.1:+5737919 | MS.gene073322:CDS |
TCATCTGCATTTGCTAAACT+TGG | 0.351811 | 8.1:-5737816 | None:intergenic |
CACAAAATTTGATGTAGAAT+CGG | 0.352529 | 8.1:-5749178 | None:intergenic |
ATGAAGATCAGTAATGAAAA+AGG | 0.354630 | 8.1:+5741272 | MS.gene073322:CDS |
CGGCATGTTTCACATCTGTT+TGG | 0.357636 | 8.1:+5743729 | MS.gene073322:CDS |
TTCCAAATTGATGCGAACTT+TGG | 0.357658 | 8.1:+5744293 | MS.gene073322:CDS |
TCCAAATTGATGCGAACTTT+GGG | 0.360314 | 8.1:+5744294 | MS.gene073322:CDS |
TGGCAAACCTACAGGGTATA+TGG | 0.362855 | 8.1:+5741753 | MS.gene073322:CDS |
ATGAAGGTATACCAACTTCT+TGG | 0.363031 | 8.1:+5740894 | MS.gene073322:intron |
ATAAAATTTGATGTAGAATC+TGG | 0.367314 | 8.1:-5746247 | None:intergenic |
GTATACAGCCCTCATTTGTT+GGG | 0.374985 | 8.1:+5749308 | MS.gene073322:intron |
TATGGAGAACTGATATCAAT+TGG | 0.375559 | 8.1:+5749074 | MS.gene073322:CDS |
TCTATAATGTAGTCTCATTT+CGG | 0.379763 | 8.1:-5744613 | None:intergenic |
CAATGTATAGTTTAGTTTGA+AGG | 0.396267 | 8.1:-5746218 | None:intergenic |
AAGTGTAATGCTCCCATAGA+TGG | 0.402225 | 8.1:-5742582 | None:intergenic |
AAACCAACAGCTTCCTGCTC+AGG | 0.402559 | 8.1:-5744227 | None:intergenic |
ATTATACGAGTAAACTTTCC+CGG | 0.406105 | 8.1:-5744664 | None:intergenic |
GCAGAAAACTGAATTCCCTT+TGG | 0.406916 | 8.1:-5741239 | None:intergenic |
CTCAAATTGTCGGGACCTCC+TGG | 0.407621 | 8.1:+5738352 | MS.gene073322:CDS |
AACTTGGAAAGCTGCATTGT+GGG | 0.408082 | 8.1:+5744142 | MS.gene073322:CDS |
TATGGCCAATGGGTGGAGCC+TGG | 0.410713 | 8.1:+5742551 | MS.gene073322:CDS |
TGAACCTTCAATGCCCTTGA+AGG | 0.412727 | 8.1:+5737842 | MS.gene073322:CDS |
TGTTTGGGCTTTATGGCCAA+TGG | 0.412764 | 8.1:+5742540 | MS.gene073322:CDS |
ATCTGCATGAAGTTGGCCTT+TGG | 0.420261 | 8.1:+5744574 | MS.gene073322:CDS |
ATATCACAGAGAACTTGATT+TGG | 0.422817 | 8.1:+5740968 | MS.gene073322:CDS |
GGTGGAGTGCCTATTGCATT+TGG | 0.425683 | 8.1:+5746099 | MS.gene073322:CDS |
ATGGAGAACTGATATCAATT+GGG | 0.427403 | 8.1:+5749075 | MS.gene073322:CDS |
ACATGCCGATGATGTACATC+TGG | 0.430968 | 8.1:-5743714 | None:intergenic |
GGAAGATGGAGAATGGATTA+TGG | 0.432678 | 8.1:+5737761 | MS.gene073322:CDS |
GGGAAAACATACTCCCATTT+AGG | 0.432850 | 8.1:-5741791 | None:intergenic |
AAACAGCCGGACCTCGATAT+GGG | 0.433435 | 8.1:-5742522 | None:intergenic |
GAATAAAGCATATCCTTTGT+TGG | 0.436104 | 8.1:+5743139 | MS.gene073322:CDS |
GAGAGCTGCAGTTGTAGCTT+CGG | 0.436172 | 8.1:-5738332 | None:intergenic |
GTAACCTTCAAGGGCATTGA+AGG | 0.437048 | 8.1:-5737846 | None:intergenic |
TGTGAGCTACTCATCAACTA+TGG | 0.441576 | 8.1:+5743280 | MS.gene073322:CDS |
GGAGGAGTGCCAATTGCATT+TGG | 0.445640 | 8.1:+5749029 | MS.gene073322:CDS |
ATTTCCTCTTTGTCAGTCAA+TGG | 0.448002 | 8.1:+5742100 | MS.gene073322:CDS |
TTTCTAGGCCTGCCAAGTAC+TGG | 0.448087 | 8.1:+5737871 | MS.gene073322:CDS |
CAAAGATGTTGTGCCTAAAT+GGG | 0.448272 | 8.1:+5741778 | MS.gene073322:CDS |
ATGTGCTCTGGTGAAGTTGA+TGG | 0.448613 | 8.1:-5743227 | None:intergenic |
GTTTGGGCTTTATGGCCAAT+GGG | 0.449267 | 8.1:+5742541 | MS.gene073322:CDS |
TTATTGGATTGGTTGATTGA+AGG | 0.452310 | 8.1:+5743179 | MS.gene073322:CDS |
TAGAGTTGAAGGTTCAGATT+GGG | 0.452982 | 8.1:+5741325 | MS.gene073322:CDS |
TGCATTGCCTCAGGATAAAT+GGG | 0.453503 | 8.1:+5744482 | MS.gene073322:CDS |
TCCACAGCTTTACAAAGATC+TGG | 0.454802 | 8.1:-5743789 | None:intergenic |
AACTCAGGTGGCAAACCTAC+AGG | 0.457009 | 8.1:+5741745 | MS.gene073322:CDS |
TTCTCTGTGATATGACTCTT+CGG | 0.457392 | 8.1:-5740958 | None:intergenic |
ACTGAAGAGCCGGCTGCCTA+TGG | 0.457767 | 8.1:+5746126 | MS.gene073322:CDS |
ACTGAAGAGCCAGCTGCCTA+TGG | 0.458177 | 8.1:+5749056 | MS.gene073322:CDS |
GTCCCGGGTGGTCAACAACT+TGG | 0.458789 | 8.1:+5744126 | MS.gene073322:CDS |
TGGGCAAATGGTTGCGTGAA+AGG | 0.459745 | 8.1:+5744501 | MS.gene073322:CDS |
TCAGTCCCACCAAATGCAAT+AGG | 0.463249 | 8.1:-5746108 | None:intergenic |
TTGTTCACGTCCTGGAACTC+AGG | 0.465346 | 8.1:+5741730 | MS.gene073322:CDS |
TTGCATTAACAGTTGGATCA+AGG | 0.466267 | 8.1:-5749100 | None:intergenic |
AAGGATTAAAAGCGCGTGGC+GGG | 0.467692 | 8.1:+5744520 | MS.gene073322:CDS |
ACAAAATTTGATGTAGAATC+GGG | 0.467731 | 8.1:-5749177 | None:intergenic |
TGAAAGAGAGTCTGATCAAA+AGG | 0.467782 | 8.1:-5749344 | None:intergenic |
ACTCATGTAGGTTGCAAGAA+AGG | 0.468098 | 8.1:-5742054 | None:intergenic |
CTTACTTCCTGCATTGCCTC+AGG | 0.469137 | 8.1:+5744473 | MS.gene073322:CDS |
CTACAATGGAAGATGGAGAA+TGG | 0.469723 | 8.1:+5737754 | None:intergenic |
GGGTGACAGTCAACATCTGC+TGG | 0.473712 | 8.1:+5744541 | MS.gene073322:CDS |
TTTCTTAAGGACTCAGAAGT+AGG | 0.476015 | 8.1:-5741419 | None:intergenic |
TATGGAGAGCTGATATCAAT+TGG | 0.477027 | 8.1:+5746144 | MS.gene073322:CDS |
GGATGGATCAATTATGGAAT+GGG | 0.477988 | 8.1:+5743517 | MS.gene073322:CDS |
CCAAGACGACCATTGCCAAT+GGG | 0.478151 | 8.1:-5737906 | None:intergenic |
AACTGCAGCTCTCAAATTGT+CGG | 0.478299 | 8.1:+5738342 | MS.gene073322:CDS |
GGTGCAAGGTCCTCCACATA+AGG | 0.480757 | 8.1:+5737782 | MS.gene073322:CDS |
CCTCAGGATAAATGGGCAAA+TGG | 0.481765 | 8.1:+5744489 | MS.gene073322:CDS |
ATCTGTTTGGCTTGTTTCCG+GGG | 0.482157 | 8.1:+5743742 | MS.gene073322:CDS |
ATAATGGAAGGAAGCTGTCC+TGG | 0.483329 | 8.1:+5741179 | MS.gene073322:CDS |
CATTTATCCTGAGGCAATGC+AGG | 0.485394 | 8.1:-5744480 | None:intergenic |
TCAGTACCACCAAATGCAAT+TGG | 0.485652 | 8.1:-5749038 | None:intergenic |
CCCATTGGCAATGGTCGTCT+TGG | 0.486952 | 8.1:+5737906 | MS.gene073322:CDS |
CTAATTGCTTGTTCACGTCC+TGG | 0.488943 | 8.1:+5741722 | MS.gene073322:CDS |
CTATCAAAATCTATTTCATC+GGG | 0.490402 | 8.1:+5741499 | MS.gene073322:CDS |
TGTCTTAGCGGACCCTGAGC+AGG | 0.492159 | 8.1:+5744214 | MS.gene073322:CDS |
GAAATGAGACTACATTATAG+AGG | 0.493386 | 8.1:+5744615 | MS.gene073322:CDS |
AAGGAAGCTGTCCTGGCAAA+AGG | 0.494436 | 8.1:+5741186 | MS.gene073322:CDS |
GATAAGAAGCTTAGAGTTGA+AGG | 0.495802 | 8.1:+5741314 | MS.gene073322:CDS |
AAAACACTTGATTGTCTTAG+CGG | 0.497802 | 8.1:+5744202 | MS.gene073322:CDS |
GTTACAGGAGATGAAGGTCC+CGG | 0.498255 | 8.1:+5744110 | MS.gene073322:intron |
CATTATGTTACAGGAGATGA+AGG | 0.498282 | 8.1:+5744104 | MS.gene073322:intron |
GTCAACATCTGCTGGAAAGA+AGG | 0.503287 | 8.1:+5744549 | MS.gene073322:CDS |
TTAGGGATTCACTTCGCAAA+GGG | 0.503588 | 8.1:-5744715 | None:intergenic |
AGGGAGGATGTGCTGTGAAC+AGG | 0.504751 | 8.1:-5744271 | None:intergenic |
ATTTAATATCGCCAAGAAGT+TGG | 0.504786 | 8.1:-5740905 | None:intergenic |
CCATAGATGGGTACAAAGCC+AGG | 0.507461 | 8.1:-5742569 | None:intergenic |
CAGGAAGCTGTTGGTTTCGA+AGG | 0.507723 | 8.1:+5744233 | MS.gene073322:CDS |
AACATCCCCATATCGAGGTC+CGG | 0.508469 | 8.1:+5742516 | MS.gene073322:CDS |
TTTGTCACTAGCACTCGGTC+GGG | 0.509664 | 8.1:-5741062 | None:intergenic |
CTGGCTTTGTACCCATCTAT+GGG | 0.510994 | 8.1:+5742570 | MS.gene073322:CDS |
ATCAGTTCTCCATAGGCAGC+TGG | 0.512016 | 8.1:-5749065 | None:intergenic |
GATGGCATCAGTCCAGTACT+TGG | 0.512637 | 8.1:-5737883 | None:intergenic |
ACTATCAAAATCTATTTCAT+CGG | 0.514434 | 8.1:+5741498 | MS.gene073322:CDS |
ACTACCATTGACTGACAAAG+AGG | 0.515252 | 8.1:-5742104 | None:intergenic |
GGGTTCCACAAGTCCTTATG+TGG | 0.515502 | 8.1:-5737795 | None:intergenic |
CTCATGTAGGTTGCAAGAAA+GGG | 0.516829 | 8.1:-5742053 | None:intergenic |
ACTGCAGCTCTCAAATTGTC+GGG | 0.517930 | 8.1:+5738343 | MS.gene073322:CDS |
ATTAGAAGCAAAATGCTCTC+TGG | 0.518115 | 8.1:-5741039 | None:intergenic |
GCCATTGAACCCAACAAATG+AGG | 0.518175 | 8.1:-5749317 | None:intergenic |
GATTTGATTCTCGATGAAGT+TGG | 0.518466 | 8.1:-5741638 | None:intergenic |
GGAGTGCCTATTGCATTTGG+TGG | 0.518848 | 8.1:+5746102 | MS.gene073322:CDS |
GGCCATAAAGCCCAAACAGC+CGG | 0.519676 | 8.1:-5742535 | None:intergenic |
TTAGAGTTGAAGGTTCAGAT+TGG | 0.523034 | 8.1:+5741324 | MS.gene073322:CDS |
CTGTATGCCACCCCAAATCA+TGG | 0.524612 | 8.1:-5737931 | None:intergenic |
CATCTGCATTTGCTAAACTT+GGG | 0.525917 | 8.1:-5737815 | None:intergenic |
GAGGAAATGTGATCAAATAG+TGG | 0.526093 | 8.1:-5742085 | None:intergenic |
TCCAGATCTTTGTAAAGCTG+TGG | 0.528714 | 8.1:+5743788 | MS.gene073322:CDS |
TTACACTTATACAACGGATA+AGG | 0.530156 | 8.1:+5742597 | MS.gene073322:CDS |
CAAAGCCAGGCTCCACCCAT+TGG | 0.532313 | 8.1:-5742556 | None:intergenic |
GCATCAGTCCAGTACTTGGC+AGG | 0.533349 | 8.1:-5737879 | None:intergenic |
AAAGTTCGCATCAATTTGGA+AGG | 0.535196 | 8.1:-5744291 | None:intergenic |
GGGATGGATCAATTATGGAA+TGG | 0.536443 | 8.1:+5743516 | MS.gene073322:CDS |
TCTTCACAGAGGACACCCTA+TGG | 0.537189 | 8.1:+5738224 | MS.gene073322:intron |
GAAGGTGATCTGCATGAAGT+TGG | 0.538771 | 8.1:+5744567 | MS.gene073322:CDS |
CACTTGAATTCACTTGTGGC+GGG | 0.540613 | 8.1:-5741211 | None:intergenic |
TCGAGATTTATTGTGTGCCC+CGG | 0.541482 | 8.1:-5743759 | None:intergenic |
ACCCTATGGACTGGTATACC+TGG | 0.542366 | 8.1:+5738238 | MS.gene073322:CDS |
TGAAGATTTATGTTCAAGTG+TGG | 0.542997 | 8.1:-5742013 | None:intergenic |
TCACTTGAATTCACTTGTGG+CGG | 0.543880 | 8.1:-5741212 | None:intergenic |
TGGACTGATGCCATCCCCAT+TGG | 0.544755 | 8.1:+5737891 | MS.gene073322:CDS |
ACCAAGACGACCATTGCCAA+TGG | 0.545373 | 8.1:-5737907 | None:intergenic |
TCGTCACTTGAATTCACTTG+TGG | 0.548698 | 8.1:-5741215 | None:intergenic |
CATTGCACCGGATCAAAAGC+AGG | 0.548894 | 8.1:+5743253 | MS.gene073322:CDS |
AAAGCATATCCTTTGTTGGA+AGG | 0.549016 | 8.1:+5743143 | MS.gene073322:CDS |
ACGACCATTGCCAATGGGGA+TGG | 0.551444 | 8.1:-5737901 | None:intergenic |
AATTGATATCAGCTCTCCAT+AGG | 0.553233 | 8.1:-5746142 | None:intergenic |
CTTTGTTCCATATACCCTGT+AGG | 0.553516 | 8.1:-5741760 | None:intergenic |
TCTGAAGTTCTACAGCTCAA+TGG | 0.554441 | 8.1:+5737954 | MS.gene073322:CDS |
TGGGCTTTATGGCCAATGGG+TGG | 0.554658 | 8.1:+5742544 | MS.gene073322:CDS |
CTTTGTCACTAGCACTCGGT+CGG | 0.555550 | 8.1:-5741063 | None:intergenic |
TGAACTACGAAGCTGATGGT+TGG | 0.558727 | 8.1:+5742461 | MS.gene073322:CDS |
TGCCAGGTATACCAGTCCAT+AGG | 0.559606 | 8.1:-5738240 | None:intergenic |
GAGTGCCTATTGCATTTGGT+GGG | 0.560113 | 8.1:+5746103 | MS.gene073322:CDS |
AACCAACAGCTTCCTGCTCA+GGG | 0.561258 | 8.1:-5744226 | None:intergenic |
TGATATTTATGCTCGTCACT+TGG | 0.561595 | 8.1:+5741472 | MS.gene073322:CDS |
GCCAGGTATACCAGTCCATA+GGG | 0.563037 | 8.1:-5738239 | None:intergenic |
CCATTTGCCCATTTATCCTG+AGG | 0.564150 | 8.1:-5744489 | None:intergenic |
GAATTCAAGTGACGAACCAA+AGG | 0.564563 | 8.1:+5741223 | MS.gene073322:CDS |
GAACTACGAAGCTGATGGTT+GGG | 0.566697 | 8.1:+5742462 | MS.gene073322:CDS |
GAAGCTGTTGGTTTCGAAGG+AGG | 0.567522 | 8.1:+5744236 | MS.gene073322:CDS |
GTCCTCCACATAAGGACTTG+TGG | 0.569172 | 8.1:+5737790 | MS.gene073322:CDS |
TATAGTCATTTCTGCTGCTG+AGG | 0.570632 | 8.1:+5743331 | MS.gene073322:CDS |
GATTATAGTCTAATTAAAAG+AGG | 0.572479 | 8.1:+5743810 | MS.gene073322:CDS |
GACCCTGAGCAGGAAGCTGT+TGG | 0.573863 | 8.1:+5744224 | MS.gene073322:CDS |
GGAGAGCTGATATCAATTGG+CGG | 0.574098 | 8.1:+5746147 | MS.gene073322:CDS |
TTAGTTTCCAATAATCCACC+AGG | 0.574817 | 8.1:-5743203 | None:intergenic |
GATGCCATCCCCATTGGCAA+TGG | 0.574840 | 8.1:+5737897 | MS.gene073322:CDS |
CCATTGAACCCAACAAATGA+GGG | 0.574848 | 8.1:-5749316 | None:intergenic |
GATTGGTTGATTGAAGGCCC+TGG | 0.576558 | 8.1:+5743185 | MS.gene073322:CDS |
AACAAAAGCTCCACGACGGA+AGG | 0.576567 | 8.1:-5741680 | None:intergenic |
AGTGTAATGCTCCCATAGAT+GGG | 0.578239 | 8.1:-5742581 | None:intergenic |
TTTCCAAGTTGTTGACCACC+CGG | 0.580247 | 8.1:-5744129 | None:intergenic |
TAATGACCCCGGTTTGCTTG+TGG | 0.582863 | 8.1:-5741090 | None:intergenic |
AGAGCACATGTTCATTGCAC+CGG | 0.583358 | 8.1:+5743241 | MS.gene073322:CDS |
AATTGATATCAGTTCTCCAT+AGG | 0.583989 | 8.1:-5749072 | None:intergenic |
TTCGCATCAATTTGGAAGGG+AGG | 0.584006 | 8.1:-5744287 | None:intergenic |
ATCAGCTCTCCATAGGCAGC+CGG | 0.584190 | 8.1:-5746135 | None:intergenic |
TGGAGAACTGATATCAATTG+GGG | 0.585854 | 8.1:+5749076 | MS.gene073322:CDS |
TTTAGGGATTCACTTCGCAA+AGG | 0.588564 | 8.1:-5744716 | None:intergenic |
GGAGTGCCAATTGCATTTGG+TGG | 0.589270 | 8.1:+5749032 | MS.gene073322:CDS |
CGTCTTGGTGCCATGATTTG+GGG | 0.589784 | 8.1:+5737921 | MS.gene073322:CDS |
TTATACGAGTAAACTTTCCC+GGG | 0.592154 | 8.1:-5744663 | None:intergenic |
ATTTGGTGGGACTGAAGAGC+CGG | 0.598688 | 8.1:+5746116 | MS.gene073322:CDS |
GATGTACATCCTTCCAACAA+AGG | 0.601904 | 8.1:-5743152 | None:intergenic |
TGGTTGATTGAAGGCCCTGG+TGG | 0.602533 | 8.1:+5743188 | MS.gene073322:CDS |
GGTGCAATGAACATGTGCTC+TGG | 0.603545 | 8.1:-5743239 | None:intergenic |
AATTCAAGTGACGAACCAAA+GGG | 0.604598 | 8.1:+5741224 | MS.gene073322:CDS |
ACAGAGGACACCCTATGGAC+TGG | 0.606130 | 8.1:+5738229 | MS.gene073322:intron |
CAATGGTAGTAAAACTGCAA+AGG | 0.610567 | 8.1:+5742117 | MS.gene073322:CDS |
CAACTTGGAAAGCTGCATTG+TGG | 0.614081 | 8.1:+5744141 | MS.gene073322:CDS |
TTACAGGAGATGAAGGTCCC+GGG | 0.615350 | 8.1:+5744111 | MS.gene073322:intron |
TTATAGAGGGAACAAGGTCG+TGG | 0.620761 | 8.1:+5744629 | MS.gene073322:CDS |
ACTGTAAATGATAATGACCC+CGG | 0.624851 | 8.1:-5741101 | None:intergenic |
CATGCCGATGATGTACATCT+GGG | 0.627526 | 8.1:-5743713 | None:intergenic |
TTCCAAGTTGTTGACCACCC+GGG | 0.628756 | 8.1:-5744128 | None:intergenic |
AACAGCCGGACCTCGATATG+GGG | 0.628832 | 8.1:-5742521 | None:intergenic |
AAATGAGACTACATTATAGA+GGG | 0.633004 | 8.1:+5744616 | MS.gene073322:CDS |
ACTCAGGTGGCAAACCTACA+GGG | 0.633425 | 8.1:+5741746 | MS.gene073322:CDS |
TTCCACAAGTCCTTATGTGG+AGG | 0.633472 | 8.1:-5737792 | None:intergenic |
CTTGGTGCCATGATTTGGGG+TGG | 0.637211 | 8.1:+5737924 | MS.gene073322:CDS |
AGGACCCAGATGTACATCAT+CGG | 0.638301 | 8.1:+5743709 | MS.gene073322:CDS |
GTGGCTCTTGACACTCATGT+AGG | 0.641147 | 8.1:-5742066 | None:intergenic |
AGTGTGTTACATACTTCACC+AGG | 0.642894 | 8.1:-5738370 | None:intergenic |
TGTAGGTTGCAAGAAAGGGA+CGG | 0.643834 | 8.1:-5742049 | None:intergenic |
GGAGAATGGATTATGGTGCA+AGG | 0.644352 | 8.1:+5737768 | MS.gene073322:CDS |
ACTAACATATCTCAATTGAG+AGG | 0.644837 | 8.1:+5741602 | MS.gene073322:CDS |
TTCACGTCCTGGAACTCAGG+TGG | 0.645681 | 8.1:+5741733 | MS.gene073322:CDS |
AAGTTCGCATCAATTTGGAA+GGG | 0.647148 | 8.1:-5744290 | None:intergenic |
AACATATCTCAATTGAGAGG+TGG | 0.647631 | 8.1:+5741605 | MS.gene073322:CDS |
CAAGACGACCATTGCCAATG+GGG | 0.655150 | 8.1:-5737905 | None:intergenic |
AGGATTAAAAGCGCGTGGCG+GGG | 0.658502 | 8.1:+5744521 | MS.gene073322:CDS |
AAAACTTTGTCACTAGCACT+CGG | 0.663363 | 8.1:-5741067 | None:intergenic |
ACTACATTATAGAGGGAACA+AGG | 0.668510 | 8.1:+5744623 | MS.gene073322:CDS |
GGAGCATTACACTTATACAA+CGG | 0.669501 | 8.1:+5742591 | MS.gene073322:CDS |
GTGAAAGGATTAAAAGCGCG+TGG | 0.676984 | 8.1:+5744516 | MS.gene073322:CDS |
GCTTGTTCAAAGCACAACGA+AGG | 0.677962 | 8.1:+5744443 | MS.gene073322:CDS |
AAAGGATTAAAAGCGCGTGG+CGG | 0.680888 | 8.1:+5744519 | MS.gene073322:CDS |
TGATGAAGATCCTTCCGTCG+TGG | 0.681454 | 8.1:+5741670 | MS.gene073322:CDS |
GCAAATTACATCACAATACG+CGG | 0.694354 | 8.1:+5741135 | MS.gene073322:CDS |
GCTAAAACATCCCCATATCG+AGG | 0.702013 | 8.1:+5742511 | MS.gene073322:CDS |
GGAGAACTGATATCAATTGG+GGG | 0.711885 | 8.1:+5749077 | MS.gene073322:CDS |
TAGTTTCCAATAATCCACCA+GGG | 0.722827 | 8.1:-5743202 | None:intergenic |
CAGGAGATGAAGGTCCCGGG+TGG | 0.726183 | 8.1:+5744114 | MS.gene073322:intron |
TTGAAACAAAAGCTCCACGA+CGG | 0.728251 | 8.1:-5741684 | None:intergenic |
CAGGTGAACTACGAAGCTGA+TGG | 0.740128 | 8.1:+5742457 | MS.gene073322:intron |
GTGTTACATACTTCACCAGG+AGG | 0.744967 | 8.1:-5738367 | None:intergenic |
AAATGGACCATCAAACGACG+AGG | 0.768244 | 8.1:-5741369 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 5737759 | 5749351 | 5737759 | ID=MS.gene073322 |
chr8.1 | mRNA | 5737759 | 5749351 | 5737759 | ID=MS.gene073322.t1;Parent=MS.gene073322 |
chr8.1 | exon | 5737759 | 5737975 | 5737759 | ID=MS.gene073322.t1.exon1;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5737759 | 5737975 | 5737759 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5738233 | 5738378 | 5738233 | ID=MS.gene073322.t1.exon2;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5738233 | 5738378 | 5738233 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5740900 | 5741801 | 5740900 | ID=MS.gene073322.t1.exon3;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5740900 | 5741801 | 5740900 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5742006 | 5742138 | 5742006 | ID=MS.gene073322.t1.exon4;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5742006 | 5742138 | 5742006 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5742460 | 5742618 | 5742460 | ID=MS.gene073322.t1.exon5;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5742460 | 5742618 | 5742460 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5743128 | 5743352 | 5743128 | ID=MS.gene073322.t1.exon6;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5743128 | 5743352 | 5743128 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5743437 | 5743538 | 5743437 | ID=MS.gene073322.t1.exon7;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5743437 | 5743538 | 5743437 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5743696 | 5743831 | 5743696 | ID=MS.gene073322.t1.exon8;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5743696 | 5743831 | 5743696 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5744117 | 5744315 | 5744117 | ID=MS.gene073322.t1.exon9;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5744117 | 5744315 | 5744117 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5744419 | 5744725 | 5744419 | ID=MS.gene073322.t1.exon10;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5744419 | 5744725 | 5744419 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5746078 | 5746278 | 5746078 | ID=MS.gene073322.t1.exon11;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5746078 | 5746278 | 5746078 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5749008 | 5749208 | 5749008 | ID=MS.gene073322.t1.exon12;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5749008 | 5749208 | 5749008 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
chr8.1 | exon | 5749316 | 5749351 | 5749316 | ID=MS.gene073322.t1.exon13;Parent=MS.gene073322.t1 |
chr8.1 | CDS | 5749316 | 5749351 | 5749316 | ID=cds.MS.gene073322.t1;Parent=MS.gene073322.t1 |
Gene Sequence |
Protein sequence |