Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058183.t1 | XP_024632099.1 | 90.8 | 240 | 22 | 0 | 1 | 240 | 1 | 240 | 4.00E-124 | 454.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058183.t1 | Q2V6J9 | 32.1 | 237 | 148 | 4 | 10 | 240 | 11 | 240 | 1.5e-31 | 137.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058183.t1 | D2D583 | 84.6 | 240 | 37 | 0 | 1 | 240 | 1 | 240 | 7.8e-114 | 419.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene058183 | 0.819854 | 9.33E-53 | -1.69E-46 |
| MS.gene049627 | MS.gene058183 | 0.80877 | 2.63E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene058183 | 0.828553 | 8.44E-55 | -1.69E-46 |
| MS.gene050216 | MS.gene058183 | 0.808438 | 3.10E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene058183 | 0.814727 | 1.33E-51 | -1.69E-46 |
| MS.gene050520 | MS.gene058183 | 0.80498 | 1.66E-49 | -1.69E-46 |
| MS.gene053018 | MS.gene058183 | 0.806476 | 8.08E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene058183 | 0.80165 | 8.15E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene058183 | 0.807369 | 5.23E-50 | -1.69E-46 |
| MS.gene053626 | MS.gene058183 | 0.809276 | 2.05E-50 | -1.69E-46 |
| MS.gene053633 | MS.gene058183 | 0.836868 | 7.27E-57 | -1.69E-46 |
| MS.gene054196 | MS.gene058183 | 0.813975 | 1.95E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene058183 | 0.814526 | 1.47E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene058183 | 0.800174 | 1.63E-48 | -1.69E-46 |
| MS.gene056046 | MS.gene058183 | 0.803027 | 4.24E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene058183 | 0.802435 | 5.62E-49 | -1.69E-46 |
| MS.gene056510 | MS.gene058183 | 0.805863 | 1.09E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene059034 | 0.975883 | 8.90E-141 | -1.69E-46 |
| MS.gene058183 | MS.gene059367 | 0.822402 | 2.41E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene060482 | 0.88193 | 1.59E-70 | -1.69E-46 |
| MS.gene058183 | MS.gene061556 | 0.835671 | 1.46E-56 | -1.69E-46 |
| MS.gene058183 | MS.gene061731 | 0.814087 | 1.84E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene061862 | 0.801755 | 7.75E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene062907 | 0.813148 | 2.96E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene062923 | 0.80763 | 4.60E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene062925 | 0.803823 | 2.90E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene06346 | 0.820852 | 5.51E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene064435 | 0.813305 | 2.74E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene064666 | 0.809013 | 2.33E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene065205 | 0.826486 | 2.64E-54 | -1.69E-46 |
| MS.gene058183 | MS.gene065540 | 0.838092 | 3.53E-57 | -1.69E-46 |
| MS.gene058183 | MS.gene065830 | 0.834568 | 2.78E-56 | -1.69E-46 |
| MS.gene058183 | MS.gene067332 | 0.877387 | 6.54E-69 | -1.69E-46 |
| MS.gene058183 | MS.gene067456 | 0.826227 | 3.05E-54 | -1.69E-46 |
| MS.gene058183 | MS.gene068071 | 0.813511 | 2.47E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene068138 | 0.81079 | 9.68E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene068224 | 0.810731 | 9.97E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene068272 | 0.807013 | 6.22E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene068674 | 0.804457 | 2.14E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene069355 | 0.833123 | 6.39E-56 | -1.69E-46 |
| MS.gene058183 | MS.gene071690 | 0.804418 | 2.18E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene071833 | 0.99783 | 4.22E-250 | -1.69E-46 |
| MS.gene058183 | MS.gene071900 | 0.826457 | 2.68E-54 | -1.69E-46 |
| MS.gene058183 | MS.gene071930 | 0.803436 | 3.49E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene071931 | 0.83015 | 3.45E-55 | -1.69E-46 |
| MS.gene058183 | MS.gene073118 | 0.83118 | 1.93E-55 | -1.69E-46 |
| MS.gene058183 | MS.gene07329 | 0.851218 | 1.02E-60 | -1.69E-46 |
| MS.gene058183 | MS.gene073310 | 0.813515 | 2.46E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene073322 | 0.810344 | 1.21E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene073640 | 0.813909 | 2.02E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene073883 | 0.819154 | 1.35E-52 | -1.69E-46 |
| MS.gene058183 | MS.gene07427 | 0.802548 | 5.32E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene07428 | 0.805786 | 1.13E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene07606 | 0.816021 | 6.85E-52 | -1.69E-46 |
| MS.gene058183 | MS.gene07607 | 0.814712 | 1.34E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene08253 | 0.805153 | 1.53E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene08254 | 0.841648 | 4.18E-58 | -1.69E-46 |
| MS.gene058183 | MS.gene08520 | 0.870199 | 1.75E-66 | -1.69E-46 |
| MS.gene058183 | MS.gene09053 | 0.846632 | 1.92E-59 | -1.69E-46 |
| MS.gene058183 | MS.gene09193 | 0.801429 | 9.04E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene20594 | 0.80515 | 1.53E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene20878 | 0.836159 | 1.10E-56 | -1.69E-46 |
| MS.gene058183 | MS.gene21150 | 0.801018 | 1.10E-48 | -1.69E-46 |
| MS.gene058183 | MS.gene21268 | 0.823013 | 1.74E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene23217 | 0.804348 | 2.26E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene23219 | 0.807754 | 4.33E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene23254 | 0.810444 | 1.15E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene23350 | 0.815318 | 9.83E-52 | -1.69E-46 |
| MS.gene058183 | MS.gene23352 | 0.801591 | 8.38E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene24082 | 0.817232 | 3.67E-52 | -1.69E-46 |
| MS.gene058183 | MS.gene24474 | 0.811421 | 7.06E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene24631 | 0.822054 | 2.91E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene26384 | 0.800703 | 1.27E-48 | -1.69E-46 |
| MS.gene058183 | MS.gene26385 | 0.800287 | 1.55E-48 | -1.69E-46 |
| MS.gene058183 | MS.gene26579 | 0.802931 | 4.44E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene26662 | 0.802511 | 5.42E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene27116 | 0.822903 | 1.85E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene28138 | 0.800991 | 1.11E-48 | -1.69E-46 |
| MS.gene058183 | MS.gene29182 | 0.828367 | 9.35E-55 | -1.69E-46 |
| MS.gene058183 | MS.gene32026 | 0.807866 | 4.10E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene32652 | 0.804897 | 1.73E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene34025 | 0.808365 | 3.21E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene34171 | 0.848483 | 5.96E-60 | -1.69E-46 |
| MS.gene058183 | MS.gene34554 | 0.826275 | 2.97E-54 | -1.69E-46 |
| MS.gene058183 | MS.gene35338 | 0.819399 | 1.19E-52 | -1.69E-46 |
| MS.gene058183 | MS.gene37678 | -0.808174 | 3.53E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene38173 | -0.800345 | 1.51E-48 | -1.69E-46 |
| MS.gene058183 | MS.gene38214 | 0.804132 | 2.50E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene39520 | 0.807526 | 4.84E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene39577 | 0.804289 | 2.32E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene40101 | 0.828408 | 9.14E-55 | -1.69E-46 |
| MS.gene058183 | MS.gene40110 | 0.842235 | 2.93E-58 | -1.69E-46 |
| MS.gene058183 | MS.gene40943 | 0.819821 | 9.50E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene40954 | 0.804845 | 1.78E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene42341 | 0.824767 | 6.75E-54 | -1.69E-46 |
| MS.gene058183 | MS.gene43618 | 0.805452 | 1.33E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene44017 | 0.823826 | 1.12E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene44099 | 0.815811 | 7.64E-52 | -1.69E-46 |
| MS.gene058183 | MS.gene44305 | 0.844182 | 8.86E-59 | -1.69E-46 |
| MS.gene058183 | MS.gene44721 | -0.800424 | 1.45E-48 | -1.69E-46 |
| MS.gene058183 | MS.gene47377 | 0.820492 | 6.67E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene47527 | 0.804981 | 1.66E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene47951 | 0.819752 | 9.85E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene49499 | 0.814447 | 1.53E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene50709 | 0.805022 | 1.63E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene50712 | 0.828471 | 8.83E-55 | -1.69E-46 |
| MS.gene058183 | MS.gene54413 | 0.849084 | 4.06E-60 | -1.69E-46 |
| MS.gene058183 | MS.gene54415 | 0.836343 | 9.90E-57 | -1.69E-46 |
| MS.gene058183 | MS.gene58416 | 0.809787 | 1.59E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene59273 | -0.805063 | 1.60E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene59576 | 0.822079 | 2.87E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene61741 | 0.835576 | 1.55E-56 | -1.69E-46 |
| MS.gene058183 | MS.gene63788 | 0.828522 | 8.58E-55 | -1.69E-46 |
| MS.gene058183 | MS.gene66458 | 0.814117 | 1.81E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene68457 | 0.825314 | 5.01E-54 | -1.69E-46 |
| MS.gene058183 | MS.gene68458 | 0.807541 | 4.81E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene70170 | 0.808104 | 3.65E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene70326 | 0.802026 | 6.82E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene70393 | 0.801566 | 8.48E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene71268 | 0.805908 | 1.06E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene72181 | 0.810083 | 1.37E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene72186 | -0.81331 | 2.73E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene72257 | 0.810982 | 8.79E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene72784 | 0.817935 | 2.55E-52 | -1.69E-46 |
| MS.gene058183 | MS.gene73248 | 0.81677 | 4.66E-52 | -1.69E-46 |
| MS.gene058183 | MS.gene73493 | 0.835011 | 2.15E-56 | -1.69E-46 |
| MS.gene058183 | MS.gene73546 | 0.800189 | 1.62E-48 | -1.69E-46 |
| MS.gene058183 | MS.gene74217 | 0.820645 | 6.15E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene74228 | 0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene74898 | 0.819213 | 1.31E-52 | -1.69E-46 |
| MS.gene058183 | MS.gene75231 | 0.806428 | 8.27E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene76346 | 0.8004 | 1.47E-48 | -1.69E-46 |
| MS.gene058183 | MS.gene80239 | 0.80034 | 1.51E-48 | -1.69E-46 |
| MS.gene058183 | MS.gene80303 | 0.808287 | 3.34E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene81067 | 0.807653 | 4.55E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene82008 | 0.866826 | 2.15E-65 | -1.69E-46 |
| MS.gene058183 | MS.gene82146 | 0.815125 | 1.09E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene82869 | 0.833686 | 4.62E-56 | -1.69E-46 |
| MS.gene058183 | MS.gene82917 | 0.829266 | 5.67E-55 | -1.69E-46 |
| MS.gene058183 | MS.gene83460 | 0.821888 | 3.18E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene84011 | 0.814787 | 1.29E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene85601 | 0.814959 | 1.18E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene85940 | 0.821487 | 3.93E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene86018 | 0.802061 | 6.71E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene86071 | 0.833574 | 4.93E-56 | -1.69E-46 |
| MS.gene058183 | MS.gene86979 | 0.822924 | 1.83E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene88820 | 0.821292 | 4.36E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene89729 | 0.802506 | 5.43E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene90269 | 0.826789 | 2.24E-54 | -1.69E-46 |
| MS.gene058183 | MS.gene90796 | 0.822111 | 2.82E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene92618 | 0.807197 | 5.69E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene93036 | 0.814113 | 1.82E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene93737 | 0.805995 | 1.02E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene94628 | 0.823009 | 1.74E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene95289 | 0.837168 | 6.09E-57 | -1.69E-46 |
| MS.gene058183 | MS.gene95701 | 0.802355 | 5.84E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene96309 | 0.823242 | 1.54E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene96348 | 0.807647 | 4.56E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene96524 | 0.800193 | 1.62E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058183.t1 | MTR_2g034990 | 83.750 | 240 | 39 | 0 | 1 | 240 | 1 | 240 | 5.50e-149 | 424 |
| MS.gene058183.t1 | MTR_2g035020 | 84.583 | 240 | 37 | 0 | 1 | 240 | 1 | 240 | 4.41e-144 | 412 |
| MS.gene058183.t1 | MTR_5g029800 | 71.250 | 240 | 65 | 1 | 1 | 240 | 1 | 236 | 4.58e-120 | 351 |
| MS.gene058183.t1 | MTR_7g012120 | 71.250 | 240 | 67 | 1 | 1 | 240 | 6 | 243 | 8.55e-118 | 345 |
| MS.gene058183.t1 | MTR_4g117960 | 67.917 | 240 | 75 | 1 | 1 | 240 | 1 | 238 | 4.05e-114 | 336 |
| MS.gene058183.t1 | MTR_5g067170 | 68.880 | 241 | 71 | 2 | 1 | 240 | 1 | 238 | 7.88e-114 | 335 |
| MS.gene058183.t1 | MTR_4g117980 | 62.500 | 240 | 90 | 0 | 1 | 240 | 1 | 240 | 1.33e-105 | 314 |
| MS.gene058183.t1 | MTR_6g035185 | 63.750 | 240 | 87 | 0 | 1 | 240 | 1 | 240 | 5.87e-104 | 310 |
| MS.gene058183.t1 | MTR_6g035265 | 61.250 | 240 | 84 | 3 | 1 | 240 | 1 | 231 | 2.24e-99 | 298 |
| MS.gene058183.t1 | MTR_8g032950 | 61.925 | 239 | 88 | 1 | 2 | 240 | 3 | 238 | 1.36e-94 | 286 |
| MS.gene058183.t1 | MTR_0536s0020 | 52.991 | 234 | 100 | 2 | 7 | 240 | 14 | 237 | 5.97e-84 | 258 |
| MS.gene058183.t1 | MTR_4g117890 | 52.991 | 234 | 100 | 2 | 7 | 240 | 9 | 232 | 5.14e-83 | 256 |
| MS.gene058183.t1 | MTR_0536s0010 | 50.638 | 235 | 104 | 2 | 6 | 240 | 16 | 238 | 1.32e-77 | 242 |
| MS.gene058183.t1 | MTR_4g117950 | 50.638 | 235 | 105 | 2 | 6 | 240 | 1 | 224 | 1.58e-77 | 241 |
| MS.gene058183.t1 | MTR_4g118000 | 51.282 | 234 | 101 | 2 | 7 | 240 | 8 | 228 | 3.11e-77 | 241 |
| MS.gene058183.t1 | MTR_2g035040 | 90.244 | 123 | 12 | 0 | 118 | 240 | 23 | 145 | 6.90e-77 | 238 |
| MS.gene058183.t1 | MTR_4g117970 | 65.031 | 163 | 53 | 1 | 78 | 240 | 53 | 211 | 4.33e-71 | 223 |
| MS.gene058183.t1 | MTR_2g035050 | 91.304 | 115 | 10 | 0 | 1 | 115 | 1 | 115 | 2.17e-65 | 199 |
| MS.gene058183.t1 | MTR_4g031800 | 39.831 | 236 | 132 | 4 | 8 | 240 | 6 | 234 | 1.42e-55 | 185 |
| MS.gene058183.t1 | MTR_0536s0030 | 46.774 | 186 | 89 | 2 | 36 | 221 | 5 | 180 | 5.25e-53 | 175 |
| MS.gene058183.t1 | MTR_4g485630 | 34.728 | 239 | 141 | 5 | 10 | 240 | 8 | 239 | 6.33e-40 | 143 |
| MS.gene058183.t1 | MTR_5g016660 | 32.917 | 240 | 148 | 4 | 10 | 240 | 9 | 244 | 1.34e-38 | 140 |
| MS.gene058183.t1 | MTR_7g070780 | 34.766 | 256 | 136 | 8 | 1 | 238 | 1 | 243 | 1.83e-37 | 137 |
| MS.gene058183.t1 | MTR_7g117405 | 35.043 | 234 | 139 | 5 | 14 | 238 | 15 | 244 | 1.02e-36 | 135 |
| MS.gene058183.t1 | MTR_5g039900 | 32.083 | 240 | 150 | 4 | 10 | 240 | 12 | 247 | 1.63e-36 | 134 |
| MS.gene058183.t1 | MTR_7g070740 | 33.852 | 257 | 137 | 7 | 1 | 238 | 1 | 243 | 7.94e-36 | 132 |
| MS.gene058183.t1 | MTR_6g035295 | 33.471 | 242 | 146 | 5 | 10 | 240 | 11 | 248 | 2.89e-35 | 131 |
| MS.gene058183.t1 | MTR_7g102450 | 35.897 | 234 | 120 | 8 | 16 | 238 | 16 | 230 | 3.98e-35 | 130 |
| MS.gene058183.t1 | MTR_8g066610 | 31.020 | 245 | 152 | 5 | 9 | 240 | 7 | 247 | 4.02e-35 | 130 |
| MS.gene058183.t1 | MTR_7g055710 | 33.071 | 254 | 143 | 7 | 1 | 238 | 1 | 243 | 1.88e-34 | 129 |
| MS.gene058183.t1 | MTR_7g070800 | 33.865 | 251 | 139 | 6 | 6 | 240 | 1 | 240 | 2.87e-34 | 128 |
| MS.gene058183.t1 | MTR_7g070860 | 33.735 | 249 | 138 | 6 | 8 | 240 | 4 | 241 | 2.15e-33 | 125 |
| MS.gene058183.t1 | MTR_7g070930 | 32.231 | 242 | 143 | 5 | 10 | 238 | 13 | 246 | 5.88e-33 | 125 |
| MS.gene058183.t1 | MTR_7g070660 | 31.474 | 251 | 151 | 5 | 1 | 238 | 1 | 243 | 1.79e-32 | 123 |
| MS.gene058183.t1 | MTR_5g045970 | 31.873 | 251 | 135 | 9 | 10 | 238 | 15 | 251 | 2.81e-32 | 123 |
| MS.gene058183.t1 | MTR_5g045960 | 30.453 | 243 | 153 | 6 | 8 | 238 | 6 | 244 | 3.98e-32 | 122 |
| MS.gene058183.t1 | MTR_4g108250 | 31.801 | 261 | 140 | 7 | 1 | 238 | 1 | 246 | 3.10e-31 | 120 |
| MS.gene058183.t1 | MTR_7g071040 | 30.677 | 251 | 153 | 5 | 1 | 238 | 7 | 249 | 1.71e-30 | 118 |
| MS.gene058183.t1 | MTR_7g070910 | 31.452 | 248 | 155 | 6 | 1 | 238 | 1 | 243 | 1.72e-30 | 118 |
| MS.gene058183.t1 | MTR_7g070810 | 31.250 | 240 | 152 | 4 | 8 | 238 | 6 | 241 | 3.94e-30 | 117 |
| MS.gene058183.t1 | MTR_5g040030 | 30.204 | 245 | 153 | 7 | 8 | 240 | 11 | 249 | 6.31e-30 | 116 |
| MS.gene058183.t1 | MTR_7g070610 | 29.134 | 254 | 151 | 6 | 2 | 238 | 4 | 245 | 9.64e-30 | 116 |
| MS.gene058183.t1 | MTR_4g485620 | 29.870 | 231 | 145 | 5 | 23 | 240 | 1 | 227 | 1.51e-29 | 115 |
| MS.gene058183.t1 | MTR_7g070940 | 30.833 | 240 | 153 | 4 | 8 | 238 | 6 | 241 | 2.21e-29 | 115 |
| MS.gene058183.t1 | MTR_7g071050 | 34.737 | 190 | 110 | 4 | 2 | 187 | 4 | 183 | 1.41e-27 | 109 |
| MS.gene058183.t1 | MTR_4g485590 | 32.083 | 240 | 122 | 5 | 12 | 240 | 10 | 219 | 2.23e-27 | 108 |
| MS.gene058183.t1 | MTR_1g062380 | 30.165 | 242 | 147 | 7 | 12 | 238 | 17 | 251 | 3.71e-27 | 108 |
| MS.gene058183.t1 | MTR_7g102490 | 30.204 | 245 | 148 | 8 | 11 | 238 | 7 | 245 | 1.78e-26 | 107 |
| MS.gene058183.t1 | MTR_7g070870 | 30.000 | 240 | 152 | 4 | 8 | 238 | 16 | 248 | 2.62e-26 | 106 |
| MS.gene058183.t1 | MTR_1g040310 | 30.242 | 248 | 154 | 6 | 4 | 240 | 8 | 247 | 1.02e-25 | 105 |
| MS.gene058183.t1 | MTR_7g102560 | 29.461 | 241 | 150 | 9 | 10 | 238 | 8 | 240 | 5.75e-25 | 102 |
| MS.gene058183.t1 | MTR_7g102550 | 27.848 | 237 | 154 | 7 | 14 | 238 | 12 | 243 | 7.16e-25 | 102 |
| MS.gene058183.t1 | MTR_7g039570 | 30.189 | 212 | 131 | 6 | 10 | 209 | 13 | 219 | 1.59e-24 | 98.2 |
| MS.gene058183.t1 | MTR_7g102460 | 30.612 | 245 | 146 | 10 | 11 | 238 | 7 | 244 | 5.33e-24 | 100 |
| MS.gene058183.t1 | MTR_4g024020 | 29.630 | 243 | 153 | 8 | 11 | 238 | 7 | 246 | 1.47e-23 | 99.0 |
| MS.gene058183.t1 | MTR_7g470590 | 37.600 | 125 | 75 | 2 | 1 | 122 | 1 | 125 | 1.41e-21 | 87.0 |
| MS.gene058183.t1 | MTR_7g070570 | 37.600 | 125 | 75 | 2 | 1 | 122 | 1 | 125 | 1.41e-21 | 87.0 |
| MS.gene058183.t1 | MTR_7g102520 | 29.707 | 239 | 146 | 9 | 14 | 238 | 15 | 245 | 7.70e-21 | 91.3 |
| MS.gene058183.t1 | MTR_8g044140 | 28.846 | 208 | 134 | 5 | 40 | 238 | 6 | 208 | 1.77e-20 | 90.1 |
| MS.gene058183.t1 | MTR_4g485640 | 28.070 | 228 | 139 | 6 | 19 | 238 | 217 | 427 | 8.90e-17 | 79.3 |
| MS.gene058183.t1 | MTR_8g068330 | 32.394 | 142 | 85 | 5 | 7 | 144 | 4 | 138 | 1.83e-13 | 69.7 |
| MS.gene058183.t1 | MTR_7g067330 | 27.972 | 143 | 88 | 3 | 8 | 144 | 6 | 139 | 3.61e-11 | 62.8 |
| MS.gene058183.t1 | MTR_8g007565 | 23.868 | 243 | 167 | 6 | 7 | 237 | 3 | 239 | 4.98e-11 | 62.4 |
| MS.gene058183.t1 | MTR_8g007650 | 23.868 | 243 | 167 | 6 | 7 | 237 | 3 | 239 | 5.03e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058183.t1 | AT2G36770 | 33.735 | 249 | 147 | 6 | 5 | 240 | 8 | 251 | 2.03e-36 | 134 |
| MS.gene058183.t1 | AT2G36750 | 32.927 | 246 | 152 | 6 | 5 | 240 | 4 | 246 | 1.83e-35 | 132 |
| MS.gene058183.t1 | AT2G36780 | 33.471 | 242 | 147 | 6 | 10 | 240 | 13 | 251 | 2.89e-33 | 125 |
| MS.gene058183.t1 | AT4G34131 | 30.120 | 249 | 154 | 6 | 8 | 240 | 7 | 251 | 5.69e-33 | 125 |
| MS.gene058183.t1 | AT2G36790 | 32.231 | 242 | 148 | 6 | 9 | 238 | 11 | 248 | 5.93e-33 | 125 |
| MS.gene058183.t1 | AT2G36760 | 31.452 | 248 | 146 | 7 | 9 | 240 | 12 | 251 | 3.11e-31 | 120 |
| MS.gene058183.t1 | AT2G36800 | 30.992 | 242 | 152 | 5 | 9 | 238 | 10 | 248 | 3.18e-31 | 120 |
| MS.gene058183.t1 | AT3G53150 | 31.102 | 254 | 153 | 8 | 1 | 238 | 10 | 257 | 9.67e-31 | 119 |
| MS.gene058183.t1 | AT4G34135 | 28.514 | 249 | 158 | 7 | 8 | 240 | 8 | 252 | 9.21e-30 | 114 |
| MS.gene058183.t1 | AT4G34135 | 28.514 | 249 | 158 | 7 | 8 | 240 | 8 | 252 | 5.19e-29 | 114 |
| MS.gene058183.t1 | AT3G53160 | 32.510 | 243 | 146 | 8 | 9 | 238 | 6 | 243 | 3.20e-28 | 112 |
| MS.gene058183.t1 | AT4G34138 | 28.125 | 256 | 156 | 9 | 4 | 240 | 5 | 251 | 5.05e-27 | 108 |
| MS.gene058183.t1 | AT2G15480 | 25.794 | 252 | 167 | 7 | 5 | 240 | 4 | 251 | 1.43e-26 | 107 |
| MS.gene058183.t1 | AT2G15480 | 25.794 | 252 | 167 | 7 | 5 | 240 | 4 | 251 | 1.88e-26 | 107 |
| MS.gene058183.t1 | AT2G15490 | 28.163 | 245 | 156 | 7 | 12 | 240 | 8 | 248 | 2.11e-26 | 107 |
| MS.gene058183.t1 | AT2G15490 | 27.755 | 245 | 157 | 6 | 12 | 240 | 8 | 248 | 2.35e-26 | 106 |
| MS.gene058183.t1 | AT2G15490 | 30.222 | 225 | 142 | 6 | 12 | 224 | 8 | 229 | 1.36e-25 | 101 |
| MS.gene058183.t1 | AT5G14860 | 27.074 | 229 | 145 | 5 | 14 | 221 | 11 | 238 | 6.08e-16 | 77.0 |
| MS.gene058183.t1 | AT1G06000 | 31.073 | 177 | 111 | 5 | 12 | 181 | 11 | 183 | 2.59e-14 | 72.0 |
| MS.gene058183.t1 | AT5G03490 | 27.311 | 238 | 161 | 7 | 5 | 235 | 13 | 245 | 1.48e-13 | 69.7 |
| MS.gene058183.t1 | AT1G73880 | 27.843 | 255 | 149 | 12 | 5 | 238 | 6 | 246 | 2.21e-13 | 69.3 |
| MS.gene058183.t1 | AT5G49690 | 28.814 | 177 | 118 | 4 | 7 | 182 | 6 | 175 | 1.40e-11 | 63.9 |
| MS.gene058183.t1 | AT1G10400 | 26.378 | 254 | 147 | 10 | 12 | 240 | 8 | 246 | 1.95e-11 | 63.5 |
| MS.gene058183.t1 | AT2G22590 | 27.972 | 143 | 97 | 3 | 10 | 148 | 14 | 154 | 3.77e-11 | 62.8 |
Find 78 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATATGATGAGGAAAATT+TGG | 0.225535 | 2.2:-53881159 | None:intergenic |
| ATTCCGTTAAATGTGATGTT+AGG | 0.275456 | 2.2:-53881039 | None:intergenic |
| TTGTGTCGAGCATCGTTTCT+AGG | 0.310903 | 2.2:-53881218 | None:intergenic |
| TGTTAGGGATCTGAAACTTA+TGG | 0.318193 | 2.2:-53881023 | None:intergenic |
| TTCATTCCATTTCTAGCATC+TGG | 0.324858 | 2.2:+53880664 | MS.gene058183:CDS |
| AAACCACGGGTCACAAAGTT+TGG | 0.347740 | 2.2:+53881316 | MS.gene058183:CDS |
| ATACCCATGGGCTAATGATT+TGG | 0.367133 | 2.2:+53880999 | MS.gene058183:CDS |
| ATCCCTAACATCACATTTAA+CGG | 0.369994 | 2.2:+53881036 | MS.gene058183:CDS |
| TTCTCATATAAATTCTGATT+CGG | 0.385242 | 2.2:+53881116 | MS.gene058183:CDS |
| TGGACCCATTGAGGATTTCA+TGG | 0.385605 | 2.2:+53880939 | MS.gene058183:CDS |
| GGTCACAAAGTTTGGCATCT+TGG | 0.400304 | 2.2:+53881324 | MS.gene058183:CDS |
| GGATTGGACGTTGGAGGGAG+TGG | 0.414768 | 2.2:-53880755 | None:intergenic |
| AGGAATTCAATGATTAACTT+TGG | 0.416716 | 2.2:-53881198 | None:intergenic |
| CCTCTTTGCCGTCTCCCTCA+TGG | 0.425113 | 2.2:+53881065 | MS.gene058183:CDS |
| AACAACTTCAGTGAACTTGA+TGG | 0.430043 | 2.2:+53881267 | MS.gene058183:CDS |
| ATCAGGAAGGCCAACTTGTT+GGG | 0.435056 | 2.2:-53880842 | None:intergenic |
| AGAGAGATTTGGTAAGGGAT+TGG | 0.438721 | 2.2:-53880771 | None:intergenic |
| GTTAGGGATCTGAAACTTAT+GGG | 0.441472 | 2.2:-53881022 | None:intergenic |
| ATATGTCCAGATGCTAGAAA+TGG | 0.452356 | 2.2:-53880670 | None:intergenic |
| CATCAGGAAGGCCAACTTGT+TGG | 0.452771 | 2.2:-53880843 | None:intergenic |
| TTCCGTTAAATGTGATGTTA+GGG | 0.463451 | 2.2:-53881038 | None:intergenic |
| GGTAAGGGATTGGACGTTGG+AGG | 0.465839 | 2.2:-53880761 | None:intergenic |
| CCACCGACTCCACCACATCT+TGG | 0.478304 | 2.2:+53880887 | MS.gene058183:CDS |
| AGCGGCGGATGAGAGAGATT+TGG | 0.482822 | 2.2:-53880782 | None:intergenic |
| AATTCAATGATTAACTTTGG+CGG | 0.488317 | 2.2:-53881195 | None:intergenic |
| ATTCTCCATGAAATCCTCAA+TGG | 0.492298 | 2.2:-53880944 | None:intergenic |
| GGAATGAAGTAAACTTTCAA+TGG | 0.492596 | 2.2:-53880649 | None:intergenic |
| GTAAGGGATTGGACGTTGGA+GGG | 0.494818 | 2.2:-53880760 | None:intergenic |
| TTCTCCATGAAATCCTCAAT+GGG | 0.500037 | 2.2:-53880943 | None:intergenic |
| CGGATGAGAGAGATTTGGTA+AGG | 0.502074 | 2.2:-53880777 | None:intergenic |
| CCTCATCATATCACCTTGTG+TGG | 0.513929 | 2.2:+53881168 | MS.gene058183:CDS |
| GACTGTGACGTGTTGGCCAC+GGG | 0.523267 | 2.2:-53880728 | None:intergenic |
| GACACAGATTCAATGCCATC+AGG | 0.524089 | 2.2:-53880859 | None:intergenic |
| TTTGGTAAGGGATTGGACGT+TGG | 0.533399 | 2.2:-53880764 | None:intergenic |
| CTTCCAAGATGTGGTGGAGT+CGG | 0.541137 | 2.2:-53880890 | None:intergenic |
| CTCTGACGCTGCATACCCAT+GGG | 0.541240 | 2.2:+53880987 | MS.gene058183:CDS |
| AGATGTGGTGGAGTCGGTGG+TGG | 0.542144 | 2.2:-53880884 | None:intergenic |
| TCTCTGACGCTGCATACCCA+TGG | 0.545223 | 2.2:+53880986 | MS.gene058183:CDS |
| GCGTCAGAGATGATACAATC+TGG | 0.550239 | 2.2:-53880973 | None:intergenic |
| GCGAAGGAAGGAGGGAGCGG+CGG | 0.550435 | 2.2:-53880797 | None:intergenic |
| TGACTGTGACGTGTTGGCCA+CGG | 0.551280 | 2.2:-53880729 | None:intergenic |
| GAAGGCCAACTTGTTGGGAG+GGG | 0.552799 | 2.2:-53880837 | None:intergenic |
| GAGGGTCTCCATGAGGGAGA+CGG | 0.554233 | 2.2:-53881073 | None:intergenic |
| GTGTGAAAGCGAAGGAAGGA+GGG | 0.557229 | 2.2:-53880805 | None:intergenic |
| CGTGGCGCAATGCTCCTCCA+TGG | 0.558547 | 2.2:+53880919 | MS.gene058183:CDS |
| AAAGCGAAGGAAGGAGGGAG+CGG | 0.560781 | 2.2:-53880800 | None:intergenic |
| CAACAAGTTGGCCTTCCTGA+TGG | 0.562093 | 2.2:+53880844 | MS.gene058183:CDS |
| TGAAATCCTCAATGGGTCCA+TGG | 0.564035 | 2.2:-53880936 | None:intergenic |
| GGAAGGCCAACTTGTTGGGA+GGG | 0.567130 | 2.2:-53880838 | None:intergenic |
| GCAATTATGTTTGCATCCCG+TGG | 0.572148 | 2.2:+53880712 | MS.gene058183:CDS |
| CCACACAAGGTGATATGATG+AGG | 0.573323 | 2.2:-53881168 | None:intergenic |
| GCTCCTCCATGGACCCATTG+AGG | 0.577302 | 2.2:+53880930 | MS.gene058183:CDS |
| AGTGTGAAAGCGAAGGAAGG+AGG | 0.578480 | 2.2:-53880806 | None:intergenic |
| ATAATTGCTATGTCAAGAAG+AGG | 0.578787 | 2.2:-53880697 | None:intergenic |
| GACAGTGTGAAAGCGAAGGA+AGG | 0.579335 | 2.2:-53880809 | None:intergenic |
| AGGAAAATTTGGAACGACAA+AGG | 0.584634 | 2.2:-53881148 | None:intergenic |
| TGGGCCAAATCATTAGCCCA+TGG | 0.584839 | 2.2:-53881003 | None:intergenic |
| AGGAAGGCCAACTTGTTGGG+AGG | 0.588353 | 2.2:-53880839 | None:intergenic |
| GACTTCCCCTCCCAACAAGT+TGG | 0.588648 | 2.2:+53880832 | MS.gene058183:CDS |
| ATGCCAAACTTTGTGACCCG+TGG | 0.603889 | 2.2:-53881319 | None:intergenic |
| GGGCCAAATCATTAGCCCAT+GGG | 0.607549 | 2.2:-53881002 | None:intergenic |
| CATGGAGGAGCATTGCGCCA+CGG | 0.612634 | 2.2:-53880918 | None:intergenic |
| ACGGTGGATCTTCCAAGATG+TGG | 0.612832 | 2.2:-53880899 | None:intergenic |
| GGATGAGAGAGATTTGGTAA+GGG | 0.615398 | 2.2:-53880776 | None:intergenic |
| GTGGATCTTCCAAGATGTGG+TGG | 0.616198 | 2.2:-53880896 | None:intergenic |
| CAGATTCAATGCCATCAGGA+AGG | 0.628953 | 2.2:-53880855 | None:intergenic |
| CCAAGATGTGGTGGAGTCGG+TGG | 0.631555 | 2.2:-53880887 | None:intergenic |
| ATATATTGTTCAGCAATGGA+AGG | 0.640847 | 2.2:+53880610 | None:intergenic |
| CAACACTACGAGAAAACCAC+GGG | 0.646166 | 2.2:+53881303 | MS.gene058183:CDS |
| TAATTGCTATGTCAAGAAGA+GGG | 0.646353 | 2.2:-53880696 | None:intergenic |
| TCAGAGATGATACAATCTGG+TGG | 0.654575 | 2.2:-53880970 | None:intergenic |
| TGGTGATGACTGTGACGTGT+TGG | 0.655109 | 2.2:-53880735 | None:intergenic |
| AGTCGACAGTGTGAAAGCGA+AGG | 0.660325 | 2.2:-53880813 | None:intergenic |
| CCATGAGGGAGACGGCAAAG+AGG | 0.671090 | 2.2:-53881065 | None:intergenic |
| GGAGGAGCATTGCGCCACGG+TGG | 0.675879 | 2.2:-53880915 | None:intergenic |
| CCAACACTACGAGAAAACCA+CGG | 0.719836 | 2.2:+53881302 | MS.gene058183:CDS |
| AATCCTCAATGGGTCCATGG+AGG | 0.729822 | 2.2:-53880933 | None:intergenic |
| ACATCTTGGAAGATCCACCG+TGG | 0.815972 | 2.2:+53880901 | MS.gene058183:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTCATATAAATTCTGATT+CGG | + | chr2.2:53881116-53881135 | MS.gene058183:CDS | 20.0% |
| !!! | AAGTAAATTGTTTGTTTTGA+GGG | - | chr2.2:53881094-53881113 | None:intergenic | 20.0% |
| !!! | CTCATCTTATAATAATTTGT+TGG | + | chr2.2:53882028-53882047 | MS.gene058183:intron | 20.0% |
| !!! | TAAGTAAATTGTTTGTTTTG+AGG | - | chr2.2:53881095-53881114 | None:intergenic | 20.0% |
| ! | AATTCAATGATTAACTTTGG+CGG | - | chr2.2:53881198-53881217 | None:intergenic | 25.0% |
| ! | AGGAATTCAATGATTAACTT+TGG | - | chr2.2:53881201-53881220 | None:intergenic | 25.0% |
| ! | TAATAAACAGCTATATGAGA+TGG | + | chr2.2:53881497-53881516 | MS.gene058183:intron | 25.0% |
| !! | TCAGTATTGTACATATGTTT+TGG | + | chr2.2:53881456-53881475 | MS.gene058183:intron | 25.0% |
| ACTCCTTTGAATTAATCATG+CGG | - | chr2.2:53882092-53882111 | None:intergenic | 30.0% | |
| ATAATTGCTATGTCAAGAAG+AGG | - | chr2.2:53880700-53880719 | None:intergenic | 30.0% | |
| ATCCCTAACATCACATTTAA+CGG | + | chr2.2:53881036-53881055 | MS.gene058183:CDS | 30.0% | |
| ATTCCGTTAAATGTGATGTT+AGG | - | chr2.2:53881042-53881061 | None:intergenic | 30.0% | |
| GACGAAACAACAATGTTATT+AGG | - | chr2.2:53882140-53882159 | None:intergenic | 30.0% | |
| GATTTGAAGAGAGAAACATT+GGG | + | chr2.2:53881625-53881644 | MS.gene058183:intron | 30.0% | |
| GGAATGAAGTAAACTTTCAA+TGG | - | chr2.2:53880652-53880671 | None:intergenic | 30.0% | |
| GTGATATGATGAGGAAAATT+TGG | - | chr2.2:53881162-53881181 | None:intergenic | 30.0% | |
| TAATTGCTATGTCAAGAAGA+GGG | - | chr2.2:53880699-53880718 | None:intergenic | 30.0% | |
| TGATGAAGCTAGAAATATCA+GGG | + | chr2.2:53881953-53881972 | MS.gene058183:intron | 30.0% | |
| TTCCGTTAAATGTGATGTTA+GGG | - | chr2.2:53881041-53881060 | None:intergenic | 30.0% | |
| AACAACTTCAGTGAACTTGA+TGG | + | chr2.2:53881267-53881286 | MS.gene058183:CDS | 35.0% | |
| AAGAAGGGTTTGATCATTAG+GGG | + | chr2.2:53881648-53881667 | MS.gene058183:intron | 35.0% | |
| AAGCCGCATGATTAATTCAA+AGG | + | chr2.2:53882086-53882105 | MS.gene058183:intron | 35.0% | |
| ATATGTCCAGATGCTAGAAA+TGG | - | chr2.2:53880673-53880692 | None:intergenic | 35.0% | |
| ATTCTCCATGAAATCCTCAA+TGG | - | chr2.2:53880947-53880966 | None:intergenic | 35.0% | |
| CCTTTCTGATTTCTCTTGAA+CGG | - | chr2.2:53881373-53881392 | None:intergenic | 35.0% | |
| CGTTCAAGAGAAATCAGAAA+GGG | + | chr2.2:53881371-53881390 | MS.gene058183:intron | 35.0% | |
| GAAGAAGGGTTTGATCATTA+GGG | + | chr2.2:53881647-53881666 | MS.gene058183:intron | 35.0% | |
| GCTTAATATCTTAACCTGTG+GGG | - | chr2.2:53881679-53881698 | None:intergenic | 35.0% | |
| GGATTTGAAGAGAGAAACAT+TGG | + | chr2.2:53881624-53881643 | MS.gene058183:intron | 35.0% | |
| GGCTTAATATCTTAACCTGT+GGG | - | chr2.2:53881680-53881699 | None:intergenic | 35.0% | |
| GTGATGAAGCTAGAAATATC+AGG | + | chr2.2:53881952-53881971 | MS.gene058183:intron | 35.0% | |
| GTTCAAGAGAAATCAGAAAG+GGG | + | chr2.2:53881372-53881391 | MS.gene058183:intron | 35.0% | |
| GTTCTGCAAATAAGAGAAGT+TGG | - | chr2.2:53881351-53881370 | None:intergenic | 35.0% | |
| TAGAATTGATCTCCATGAAC+TGG | - | chr2.2:53881789-53881808 | None:intergenic | 35.0% | |
| TGGCTTAATATCTTAACCTG+TGG | - | chr2.2:53881681-53881700 | None:intergenic | 35.0% | |
| TTCTCCATGAAATCCTCAAT+GGG | - | chr2.2:53880946-53880965 | None:intergenic | 35.0% | |
| TTTCTCTCTTCAAATCCCTT+CGG | - | chr2.2:53881621-53881640 | None:intergenic | 35.0% | |
| ! | AGGAAAATTTGGAACGACAA+AGG | - | chr2.2:53881151-53881170 | None:intergenic | 35.0% |
| ! | GTTAGGGATCTGAAACTTAT+GGG | - | chr2.2:53881025-53881044 | None:intergenic | 35.0% |
| ! | TGTTAGGGATCTGAAACTTA+TGG | - | chr2.2:53881026-53881045 | None:intergenic | 35.0% |
| !! | TTCATTCCATTTCTAGCATC+TGG | + | chr2.2:53880664-53880683 | MS.gene058183:CDS | 35.0% |
| AAACTGATAACACAAGTCCG+AGG | + | chr2.2:53881816-53881835 | MS.gene058183:intron | 40.0% | |
| AAAGAAAAGTGGTTGCCGAA+GGG | + | chr2.2:53881603-53881622 | MS.gene058183:intron | 40.0% | |
| AAATCAGAAAGGGGAAACGA+GGG | + | chr2.2:53881381-53881400 | MS.gene058183:intron | 40.0% | |
| ACACAAGCTATTCAAGAAGG+TGG | + | chr2.2:53882005-53882024 | MS.gene058183:intron | 40.0% | |
| AGAGAGAAACATTGGGAAGA+AGG | + | chr2.2:53881632-53881651 | MS.gene058183:intron | 40.0% | |
| ATAACACAAGTCCGAGGAAT+TGG | + | chr2.2:53881822-53881841 | MS.gene058183:intron | 40.0% | |
| ATATTAAGCCACCATGCAGT+GGG | + | chr2.2:53881690-53881709 | MS.gene058183:intron | 40.0% | |
| ATCGTAGAGGCTGTTAGTAT+GGG | + | chr2.2:53881744-53881763 | MS.gene058183:intron | 40.0% | |
| CCGTTCAAGAGAAATCAGAA+AGG | + | chr2.2:53881370-53881389 | MS.gene058183:intron | 40.0% | |
| CTGGAACAACCCATATGAAT+GGG | - | chr2.2:53881548-53881567 | None:intergenic | 40.0% | |
| GAGAGAAACATTGGGAAGAA+GGG | + | chr2.2:53881633-53881652 | MS.gene058183:intron | 40.0% | |
| GAGCAAAGATAGCATAGAGA+AGG | + | chr2.2:53881905-53881924 | MS.gene058183:intron | 40.0% | |
| GCGAAGAAGAGAAAGAAAAG+TGG | + | chr2.2:53881592-53881611 | MS.gene058183:intron | 40.0% | |
| GCTACACAAGCTATTCAAGA+AGG | + | chr2.2:53882002-53882021 | MS.gene058183:intron | 40.0% | |
| GGAAGAAGGGTTTGATCATT+AGG | + | chr2.2:53881646-53881665 | MS.gene058183:intron | 40.0% | |
| TATCGTAGAGGCTGTTAGTA+TGG | + | chr2.2:53881743-53881762 | MS.gene058183:intron | 40.0% | |
| TCAGAGATGATACAATCTGG+TGG | - | chr2.2:53880973-53880992 | None:intergenic | 40.0% | |
| TCTTCTTTCCCTTTCTTCTC+TGG | - | chr2.2:53881567-53881586 | None:intergenic | 40.0% | |
| TGAATTAATCATGCGGCTTG+AGG | - | chr2.2:53882085-53882104 | None:intergenic | 40.0% | |
| ! | AGAGAGATTTGGTAAGGGAT+TGG | - | chr2.2:53880774-53880793 | None:intergenic | 40.0% |
| ! | ATACCCATGGGCTAATGATT+TGG | + | chr2.2:53880999-53881018 | MS.gene058183:CDS | 40.0% |
| ! | GGATGAGAGAGATTTGGTAA+GGG | - | chr2.2:53880779-53880798 | None:intergenic | 40.0% |
| ! | TCTGGAACAACCCATATGAA+TGG | - | chr2.2:53881549-53881568 | None:intergenic | 40.0% |
| AAACCACGGGTCACAAAGTT+TGG | + | chr2.2:53881316-53881335 | MS.gene058183:CDS | 45.0% | |
| AGGGTTTGATCATTAGGGGT+TGG | + | chr2.2:53881652-53881671 | MS.gene058183:intron | 45.0% | |
| ATAGCATAGAGAAGGCTGTG+AGG | + | chr2.2:53881913-53881932 | MS.gene058183:intron | 45.0% | |
| CAACACTACGAGAAAACCAC+GGG | + | chr2.2:53881303-53881322 | MS.gene058183:CDS | 45.0% | |
| CAGATTCAATGCCATCAGGA+AGG | - | chr2.2:53880858-53880877 | None:intergenic | 45.0% | |
| CCAACACTACGAGAAAACCA+CGG | + | chr2.2:53881302-53881321 | MS.gene058183:CDS | 45.0% | |
| CCACACAAGGTGATATGATG+AGG | - | chr2.2:53881171-53881190 | None:intergenic | 45.0% | |
| CCTCATCATATCACCTTGTG+TGG | + | chr2.2:53881168-53881187 | MS.gene058183:CDS | 45.0% | |
| CGACTTCAACTCCAATTCCT+CGG | - | chr2.2:53881836-53881855 | None:intergenic | 45.0% | |
| CGAGGAATTGGAGTTGAAGT+CGG | + | chr2.2:53881834-53881853 | MS.gene058183:intron | 45.0% | |
| GAAAGAAAAGTGGTTGCCGA+AGG | + | chr2.2:53881602-53881621 | MS.gene058183:intron | 45.0% | |
| GAAATCAGAAAGGGGAAACG+AGG | + | chr2.2:53881380-53881399 | MS.gene058183:intron | 45.0% | |
| GACACAGATTCAATGCCATC+AGG | - | chr2.2:53880862-53880881 | None:intergenic | 45.0% | |
| GATATTAAGCCACCATGCAG+TGG | + | chr2.2:53881689-53881708 | MS.gene058183:intron | 45.0% | |
| GCAATTATGTTTGCATCCCG+TGG | + | chr2.2:53880712-53880731 | MS.gene058183:CDS | 45.0% | |
| GCGTCAGAGATGATACAATC+TGG | - | chr2.2:53880976-53880995 | None:intergenic | 45.0% | |
| GGGTTGTTCCAGAGAAGAAA+GGG | + | chr2.2:53881556-53881575 | MS.gene058183:intron | 45.0% | |
| GGGTTTGATCATTAGGGGTT+GGG | + | chr2.2:53881653-53881672 | MS.gene058183:intron | 45.0% | |
| GGTCACAAAGTTTGGCATCT+TGG | + | chr2.2:53881324-53881343 | MS.gene058183:CDS | 45.0% | |
| TATTAAGCCACCATGCAGTG+GGG | + | chr2.2:53881691-53881710 | MS.gene058183:intron | 45.0% | |
| TGAAATCCTCAATGGGTCCA+TGG | - | chr2.2:53880939-53880958 | None:intergenic | 45.0% | |
| TGAACTGGCCACGTTATCAT+TGG | - | chr2.2:53881774-53881793 | None:intergenic | 45.0% | |
| TGCTCGAGAGTTTGGAGAAA+AGG | + | chr2.2:53881980-53881999 | MS.gene058183:intron | 45.0% | |
| TGGACCCATTGAGGATTTCA+TGG | + | chr2.2:53880939-53880958 | MS.gene058183:CDS | 45.0% | |
| TGGGTTGTTCCAGAGAAGAA+AGG | + | chr2.2:53881555-53881574 | MS.gene058183:intron | 45.0% | |
| TTGAAGTCGGTGCAACAGAA+TGG | + | chr2.2:53881847-53881866 | MS.gene058183:intron | 45.0% | |
| TTTGGTAAGGGATTGGACGT+TGG | - | chr2.2:53880767-53880786 | None:intergenic | 45.0% | |
| ! | ATCAGGAAGGCCAACTTGTT+GGG | - | chr2.2:53880845-53880864 | None:intergenic | 45.0% |
| ! | ATGATAACGTGGCCAGTTCA+TGG | + | chr2.2:53881774-53881793 | MS.gene058183:intron | 45.0% |
| ! | CGGATGAGAGAGATTTGGTA+AGG | - | chr2.2:53880780-53880799 | None:intergenic | 45.0% |
| ! | TGGGAGTTCCAATGATAACG+TGG | + | chr2.2:53881763-53881782 | MS.gene058183:intron | 45.0% |
| ! | TTGTGTCGAGCATCGTTTCT+AGG | - | chr2.2:53881221-53881240 | None:intergenic | 45.0% |
| !!! | TGTTTTGAGGGTCTCCATGA+GGG | - | chr2.2:53881082-53881101 | None:intergenic | 45.0% |
| !!! | TTGTTTTGAGGGTCTCCATG+AGG | - | chr2.2:53881083-53881102 | None:intergenic | 45.0% |
| AATCCTCAATGGGTCCATGG+AGG | - | chr2.2:53880936-53880955 | None:intergenic | 50.0% | |
| ACATCTTGGAAGATCCACCG+TGG | + | chr2.2:53880901-53880920 | MS.gene058183:CDS | 50.0% | |
| ACGGTGGATCTTCCAAGATG+TGG | - | chr2.2:53880902-53880921 | None:intergenic | 50.0% | |
| AGCGGGTCACCCATTCATAT+GGG | + | chr2.2:53881536-53881555 | MS.gene058183:intron | 50.0% | |
| AGTCGACAGTGTGAAAGCGA+AGG | - | chr2.2:53880816-53880835 | None:intergenic | 50.0% | |
| AGTGTGAAAGCGAAGGAAGG+AGG | - | chr2.2:53880809-53880828 | None:intergenic | 50.0% | |
| ATGCCAAACTTTGTGACCCG+TGG | - | chr2.2:53881322-53881341 | None:intergenic | 50.0% | |
| ATTAAGCCACCATGCAGTGG+GGG | + | chr2.2:53881692-53881711 | MS.gene058183:intron | 50.0% | |
| CATCAGGAAGGCCAACTTGT+TGG | - | chr2.2:53880846-53880865 | None:intergenic | 50.0% | |
| GAAGGCTGTGAGGAGATTGA+TGG | + | chr2.2:53881923-53881942 | MS.gene058183:intron | 50.0% | |
| GACAGTGTGAAAGCGAAGGA+AGG | - | chr2.2:53880812-53880831 | None:intergenic | 50.0% | |
| GATTTATGACGCATTGCGGG+TGG | + | chr2.2:53881715-53881734 | MS.gene058183:intron | 50.0% | |
| GCAACAGAATGGTGTACGAG+TGG | + | chr2.2:53881858-53881877 | MS.gene058183:intron | 50.0% | |
| GCTGTGAGGAGATTGATGGA+CGG | + | chr2.2:53881927-53881946 | MS.gene058183:intron | 50.0% | |
| GGGCCAAATCATTAGCCCAT+GGG | - | chr2.2:53881005-53881024 | None:intergenic | 50.0% | |
| GGGGATTTATGACGCATTGC+GGG | + | chr2.2:53881712-53881731 | MS.gene058183:intron | 50.0% | |
| GGGGGATTTATGACGCATTG+CGG | + | chr2.2:53881711-53881730 | MS.gene058183:intron | 50.0% | |
| GTAAGGGATTGGACGTTGGA+GGG | - | chr2.2:53880763-53880782 | None:intergenic | 50.0% | |
| GTGGATCTTCCAAGATGTGG+TGG | - | chr2.2:53880899-53880918 | None:intergenic | 50.0% | |
| GTGTGAAAGCGAAGGAAGGA+GGG | - | chr2.2:53880808-53880827 | None:intergenic | 50.0% | |
| TCATAAATCCCCCCACTGCA+TGG | - | chr2.2:53881704-53881723 | None:intergenic | 50.0% | |
| TGGGCCAAATCATTAGCCCA+TGG | - | chr2.2:53881006-53881025 | None:intergenic | 50.0% | |
| TGTTGCGGAGAGAGAGAAGT+TGG | + | chr2.2:53881881-53881900 | MS.gene058183:intron | 50.0% | |
| ! | ATGGTGTACGAGTGGTGTTG+CGG | + | chr2.2:53881866-53881885 | MS.gene058183:intron | 50.0% |
| ! | CCGTGGTTTTCTCGTAGTGT+TGG | - | chr2.2:53881305-53881324 | None:intergenic | 50.0% |
| ! | CTTCCAAGATGTGGTGGAGT+CGG | - | chr2.2:53880893-53880912 | None:intergenic | 50.0% |
| ! | CTTTGGCGGTTTTCCACACA+AGG | - | chr2.2:53881184-53881203 | None:intergenic | 50.0% |
| ! | TGGTGATGACTGTGACGTGT+TGG | - | chr2.2:53880738-53880757 | None:intergenic | 50.0% |
| !! | CAACAAGTTGGCCTTCCTGA+TGG | + | chr2.2:53880844-53880863 | MS.gene058183:CDS | 50.0% |
| AAAGCGAAGGAAGGAGGGAG+CGG | - | chr2.2:53880803-53880822 | None:intergenic | 55.0% | |
| AGCGGCGGATGAGAGAGATT+TGG | - | chr2.2:53880785-53880804 | None:intergenic | 55.0% | |
| AGGGTACGTGCTCGAGAGTT+TGG | + | chr2.2:53881972-53881991 | MS.gene058183:intron | 55.0% | |
| ATGTACACGAGTGCCTGAGC+TGG | + | chr2.2:53881412-53881431 | MS.gene058183:intron | 55.0% | |
| CAGCGGGTCACCCATTCATA+TGG | + | chr2.2:53881535-53881554 | MS.gene058183:intron | 55.0% | |
| CGGGTGGAACTCTATCGTAG+AGG | + | chr2.2:53881731-53881750 | MS.gene058183:intron | 55.0% | |
| CTCTGACGCTGCATACCCAT+GGG | + | chr2.2:53880987-53881006 | MS.gene058183:CDS | 55.0% | |
| GACTTCCCCTCCCAACAAGT+TGG | + | chr2.2:53880832-53880851 | MS.gene058183:CDS | 55.0% | |
| GGTAAGGGATTGGACGTTGG+AGG | - | chr2.2:53880764-53880783 | None:intergenic | 55.0% | |
| TAAATCCCCCCACTGCATGG+TGG | - | chr2.2:53881701-53881720 | None:intergenic | 55.0% | |
| TCTCTGACGCTGCATACCCA+TGG | + | chr2.2:53880986-53881005 | MS.gene058183:CDS | 55.0% | |
| TCTTTGAGTCGAGCCAGCTC+AGG | - | chr2.2:53881428-53881447 | None:intergenic | 55.0% | |
| TTAAGCCACCATGCAGTGGG+GGG | + | chr2.2:53881693-53881712 | MS.gene058183:intron | 55.0% | |
| ! | GTGAGGAGATTGATGGACGG+TGG | + | chr2.2:53881930-53881949 | MS.gene058183:intron | 55.0% |
| ! | TGACTGTGACGTGTTGGCCA+CGG | - | chr2.2:53880732-53880751 | None:intergenic | 55.0% |
| !! | AGGAAGGCCAACTTGTTGGG+AGG | - | chr2.2:53880842-53880861 | None:intergenic | 55.0% |
| !! | GAAGGCCAACTTGTTGGGAG+GGG | - | chr2.2:53880840-53880859 | None:intergenic | 55.0% |
| !! | GGAAGGCCAACTTGTTGGGA+GGG | - | chr2.2:53880841-53880860 | None:intergenic | 55.0% |
| CCATGAGGGAGACGGCAAAG+AGG | - | chr2.2:53881068-53881087 | None:intergenic | 60.0% | |
| CCTCTTTGCCGTCTCCCTCA+TGG | + | chr2.2:53881065-53881084 | MS.gene058183:CDS | 60.0% | |
| GAGGGTCTCCATGAGGGAGA+CGG | - | chr2.2:53881076-53881095 | None:intergenic | 60.0% | |
| GCATGCTCGCTAGAAGCAGC+GGG | + | chr2.2:53881519-53881538 | MS.gene058183:intron | 60.0% | |
| GCTCCTCCATGGACCCATTG+AGG | + | chr2.2:53880930-53880949 | MS.gene058183:CDS | 60.0% | |
| GGATTGGACGTTGGAGGGAG+TGG | - | chr2.2:53880758-53880777 | None:intergenic | 60.0% | |
| GGCATGCTCGCTAGAAGCAG+CGG | + | chr2.2:53881518-53881537 | MS.gene058183:intron | 60.0% | |
| ! | AGATGTGGTGGAGTCGGTGG+TGG | - | chr2.2:53880887-53880906 | None:intergenic | 60.0% |
| ! | CCAAGATGTGGTGGAGTCGG+TGG | - | chr2.2:53880890-53880909 | None:intergenic | 60.0% |
| ! | GACTGTGACGTGTTGGCCAC+GGG | - | chr2.2:53880731-53880750 | None:intergenic | 60.0% |
| !! | CATGGAGGAGCATTGCGCCA+CGG | - | chr2.2:53880921-53880940 | None:intergenic | 60.0% |
| !! | CCACCGACTCCACCACATCT+TGG | + | chr2.2:53880887-53880906 | MS.gene058183:CDS | 60.0% |
| CATTAGGGGTTGGGCCCCAC+AGG | + | chr2.2:53881662-53881681 | MS.gene058183:intron | 65.0% | |
| CGTGGCGCAATGCTCCTCCA+TGG | + | chr2.2:53880919-53880938 | MS.gene058183:CDS | 65.0% | |
| GCGAAGGAAGGAGGGAGCGG+CGG | - | chr2.2:53880800-53880819 | None:intergenic | 70.0% | |
| !! | GGAGGAGCATTGCGCCACGG+TGG | - | chr2.2:53880918-53880937 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 53880625 | 53882173 | 53880625 | ID=MS.gene058183 |
| chr2.2 | mRNA | 53880625 | 53882173 | 53880625 | ID=MS.gene058183.t1;Parent=MS.gene058183 |
| chr2.2 | exon | 53880625 | 53881345 | 53880625 | ID=MS.gene058183.t1.exon1;Parent=MS.gene058183.t1 |
| chr2.2 | CDS | 53880625 | 53881345 | 53880625 | ID=cds.MS.gene058183.t1;Parent=MS.gene058183.t1 |
| chr2.2 | exon | 53882166 | 53882173 | 53882166 | ID=MS.gene058183.t1.exon2;Parent=MS.gene058183.t1 |
| chr2.2 | CDS | 53882166 | 53882173 | 53882166 | ID=cds.MS.gene058183.t1;Parent=MS.gene058183.t1 |
| Gene Sequence |
| Protein sequence |
