Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059034.t1 | XP_024632099.1 | 90.8 | 240 | 22 | 0 | 1 | 240 | 1 | 240 | 3.90E-124 | 454.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059034.t1 | Q2V6J9 | 32.1 | 237 | 148 | 4 | 10 | 240 | 11 | 240 | 1.1e-31 | 138.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059034.t1 | D2D583 | 84.6 | 240 | 37 | 0 | 1 | 240 | 1 | 240 | 7.7e-114 | 419.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene059034 | 0.823192 | 1.58E-53 | -1.69E-46 |
| MS.gene049627 | MS.gene059034 | 0.80228 | 6.05E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene059034 | 0.823803 | 1.14E-53 | -1.69E-46 |
| MS.gene050216 | MS.gene059034 | 0.807649 | 4.56E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene059034 | 0.811603 | 6.45E-51 | -1.69E-46 |
| MS.gene053633 | MS.gene059034 | 0.837067 | 6.47E-57 | -1.69E-46 |
| MS.gene056046 | MS.gene059034 | 0.809187 | 2.14E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene059034 | 0.800912 | 1.15E-48 | -1.69E-46 |
| MS.gene056510 | MS.gene059034 | 0.807697 | 4.45E-50 | -1.69E-46 |
| MS.gene058183 | MS.gene059034 | 0.975883 | 8.90E-141 | -1.69E-46 |
| MS.gene059034 | MS.gene059367 | 0.808082 | 3.69E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene060482 | 0.884623 | 1.64E-71 | -1.69E-46 |
| MS.gene059034 | MS.gene060703 | 0.801132 | 1.04E-48 | -1.69E-46 |
| MS.gene059034 | MS.gene061556 | 0.83052 | 2.80E-55 | -1.69E-46 |
| MS.gene059034 | MS.gene061731 | 0.811582 | 6.51E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene062907 | 0.805314 | 1.42E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene062923 | 0.810111 | 1.36E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene062925 | 0.816287 | 5.98E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene06346 | 0.822024 | 2.96E-53 | -1.69E-46 |
| MS.gene059034 | MS.gene064435 | 0.812867 | 3.41E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene065205 | 0.823225 | 1.55E-53 | -1.69E-46 |
| MS.gene059034 | MS.gene065540 | 0.818891 | 1.55E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene065830 | 0.825129 | 5.55E-54 | -1.69E-46 |
| MS.gene059034 | MS.gene067332 | 0.877137 | 7.99E-69 | -1.69E-46 |
| MS.gene059034 | MS.gene068071 | 0.810806 | 9.60E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene069355 | 0.828641 | 8.03E-55 | -1.69E-46 |
| MS.gene059034 | MS.gene070650 | 0.800054 | 1.73E-48 | -1.69E-46 |
| MS.gene059034 | MS.gene071833 | 0.97709 | 4.32E-143 | -1.69E-46 |
| MS.gene059034 | MS.gene071900 | 0.848609 | 5.50E-60 | -1.69E-46 |
| MS.gene059034 | MS.gene071901 | 0.822536 | 2.25E-53 | -1.69E-46 |
| MS.gene059034 | MS.gene071930 | 0.801969 | 7.01E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene071931 | 0.818335 | 2.07E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene073118 | 0.817962 | 2.51E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene07329 | 0.840336 | 9.25E-58 | -1.69E-46 |
| MS.gene059034 | MS.gene073322 | 0.815645 | 8.31E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene073640 | 0.80909 | 2.25E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene073883 | 0.814435 | 1.54E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene07606 | 0.809802 | 1.58E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene07607 | 0.812492 | 4.13E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene08254 | 0.832772 | 7.81E-56 | -1.69E-46 |
| MS.gene059034 | MS.gene08520 | 0.867613 | 1.20E-65 | -1.69E-46 |
| MS.gene059034 | MS.gene09053 | 0.842237 | 2.92E-58 | -1.69E-46 |
| MS.gene059034 | MS.gene20878 | 0.830058 | 3.64E-55 | -1.69E-46 |
| MS.gene059034 | MS.gene21268 | 0.815444 | 9.22E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene21600 | 0.807878 | 4.08E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene23350 | 0.818516 | 1.88E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene23352 | 0.816312 | 5.90E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene24082 | 0.801117 | 1.05E-48 | -1.69E-46 |
| MS.gene059034 | MS.gene24474 | 0.801829 | 7.49E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene24631 | 0.806358 | 8.55E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene26385 | 0.802549 | 5.32E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene26662 | 0.80188 | 7.31E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene29182 | 0.807604 | 4.66E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene32026 | 0.807632 | 4.60E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene32652 | 0.803942 | 2.74E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene34171 | 0.845593 | 3.69E-59 | -1.69E-46 |
| MS.gene059034 | MS.gene34554 | 0.814597 | 1.42E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene35338 | 0.807391 | 5.17E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene37678 | -0.804205 | 2.42E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene38094 | -0.80917 | 2.16E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene38095 | -0.802951 | 4.40E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene38097 | -0.801316 | 9.54E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene38173 | -0.803904 | 2.79E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene38174 | -0.800634 | 1.31E-48 | -1.69E-46 |
| MS.gene059034 | MS.gene38214 | 0.815855 | 7.47E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene39520 | 0.804417 | 2.18E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene40101 | 0.818766 | 1.65E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene40110 | 0.840148 | 1.04E-57 | -1.69E-46 |
| MS.gene059034 | MS.gene40943 | 0.819239 | 1.29E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene42341 | 0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene44017 | 0.8038 | 2.93E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene44099 | 0.808365 | 3.21E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene44305 | 0.82551 | 4.51E-54 | -1.69E-46 |
| MS.gene059034 | MS.gene44720 | -0.800445 | 1.44E-48 | -1.69E-46 |
| MS.gene059034 | MS.gene44721 | -0.808201 | 3.48E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene44722 | -0.805525 | 1.28E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene47377 | 0.805444 | 1.33E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene47951 | 0.817211 | 3.71E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene49499 | 0.810556 | 1.09E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene50709 | 0.815839 | 7.53E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene50712 | 0.830321 | 3.14E-55 | -1.69E-46 |
| MS.gene059034 | MS.gene54413 | 0.854901 | 9.04E-62 | -1.69E-46 |
| MS.gene059034 | MS.gene54415 | 0.832514 | 9.05E-56 | -1.69E-46 |
| MS.gene059034 | MS.gene54418 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene059034 | MS.gene58021 | 0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene58416 | 0.804664 | 1.94E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene59576 | 0.810992 | 8.75E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene61741 | 0.815206 | 1.04E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene62198 | 0.80973 | 1.64E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene63788 | 0.809035 | 2.31E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene66458 | 0.80602 | 1.01E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene68457 | 0.811559 | 6.59E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene68458 | 0.804927 | 1.71E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene70393 | 0.802308 | 5.97E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene71268 | 0.800491 | 1.41E-48 | -1.69E-46 |
| MS.gene059034 | MS.gene72181 | 0.805422 | 1.35E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene72784 | 0.816078 | 6.66E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene73248 | 0.811432 | 7.02E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene73493 | 0.817599 | 3.03E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene74217 | 0.813048 | 3.12E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene74228 | 0.80989 | 1.51E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene74898 | 0.813083 | 3.06E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene75231 | 0.800633 | 1.32E-48 | -1.69E-46 |
| MS.gene059034 | MS.gene80303 | 0.803964 | 2.71E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene81067 | 0.803775 | 2.97E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene82008 | 0.857827 | 1.25E-62 | -1.69E-46 |
| MS.gene059034 | MS.gene82146 | 0.816588 | 5.12E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene82869 | 0.832265 | 1.04E-55 | -1.69E-46 |
| MS.gene059034 | MS.gene82917 | 0.828329 | 9.55E-55 | -1.69E-46 |
| MS.gene059034 | MS.gene83460 | 0.81972 | 1.00E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene84011 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene85601 | 0.80199 | 6.94E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene85940 | 0.818583 | 1.82E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene86071 | 0.830346 | 3.09E-55 | -1.69E-46 |
| MS.gene059034 | MS.gene86979 | 0.820622 | 6.22E-53 | -1.69E-46 |
| MS.gene059034 | MS.gene88820 | 0.804262 | 2.35E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene90269 | 0.818694 | 1.71E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene90796 | 0.814788 | 1.29E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene92618 | 0.801365 | 9.32E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene93036 | 0.811509 | 6.76E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene94628 | 0.813137 | 2.98E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene95289 | 0.827354 | 1.64E-54 | -1.69E-46 |
| MS.gene059034 | MS.gene95701 | 0.801486 | 8.80E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene96309 | 0.828416 | 9.10E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059034.t1 | MTR_2g034990 | 83.750 | 240 | 39 | 0 | 1 | 240 | 1 | 240 | 6.11e-149 | 424 |
| MS.gene059034.t1 | MTR_2g035020 | 84.583 | 240 | 37 | 0 | 1 | 240 | 1 | 240 | 5.96e-144 | 412 |
| MS.gene059034.t1 | MTR_5g029800 | 71.250 | 240 | 65 | 1 | 1 | 240 | 1 | 236 | 6.06e-120 | 350 |
| MS.gene059034.t1 | MTR_7g012120 | 71.250 | 240 | 67 | 1 | 1 | 240 | 6 | 243 | 1.21e-117 | 345 |
| MS.gene059034.t1 | MTR_4g117960 | 67.917 | 240 | 75 | 1 | 1 | 240 | 1 | 238 | 6.74e-114 | 335 |
| MS.gene059034.t1 | MTR_5g067170 | 68.880 | 241 | 71 | 2 | 1 | 240 | 1 | 238 | 6.83e-114 | 335 |
| MS.gene059034.t1 | MTR_4g117980 | 62.500 | 240 | 90 | 0 | 1 | 240 | 1 | 240 | 1.54e-105 | 314 |
| MS.gene059034.t1 | MTR_6g035185 | 63.750 | 240 | 87 | 0 | 1 | 240 | 1 | 240 | 9.86e-104 | 309 |
| MS.gene059034.t1 | MTR_6g035265 | 61.250 | 240 | 84 | 3 | 1 | 240 | 1 | 231 | 2.84e-99 | 298 |
| MS.gene059034.t1 | MTR_8g032950 | 61.925 | 239 | 88 | 1 | 2 | 240 | 3 | 238 | 2.10e-94 | 285 |
| MS.gene059034.t1 | MTR_0536s0020 | 52.991 | 234 | 100 | 2 | 7 | 240 | 14 | 237 | 6.95e-84 | 258 |
| MS.gene059034.t1 | MTR_4g117890 | 52.991 | 234 | 100 | 2 | 7 | 240 | 9 | 232 | 5.80e-83 | 256 |
| MS.gene059034.t1 | MTR_0536s0010 | 50.638 | 235 | 104 | 2 | 6 | 240 | 16 | 238 | 1.25e-77 | 242 |
| MS.gene059034.t1 | MTR_4g117950 | 50.638 | 235 | 105 | 2 | 6 | 240 | 1 | 224 | 1.55e-77 | 241 |
| MS.gene059034.t1 | MTR_4g118000 | 51.282 | 234 | 101 | 2 | 7 | 240 | 8 | 228 | 3.63e-77 | 241 |
| MS.gene059034.t1 | MTR_2g035040 | 90.244 | 123 | 12 | 0 | 118 | 240 | 23 | 145 | 6.69e-77 | 238 |
| MS.gene059034.t1 | MTR_4g117970 | 65.031 | 163 | 53 | 1 | 78 | 240 | 53 | 211 | 4.34e-71 | 223 |
| MS.gene059034.t1 | MTR_2g035050 | 91.304 | 115 | 10 | 0 | 1 | 115 | 1 | 115 | 2.23e-65 | 199 |
| MS.gene059034.t1 | MTR_4g031800 | 39.831 | 236 | 132 | 4 | 8 | 240 | 6 | 234 | 1.80e-55 | 184 |
| MS.gene059034.t1 | MTR_0536s0030 | 46.774 | 186 | 89 | 2 | 36 | 221 | 5 | 180 | 7.15e-53 | 174 |
| MS.gene059034.t1 | MTR_4g485630 | 34.728 | 239 | 141 | 5 | 10 | 240 | 8 | 239 | 6.95e-40 | 143 |
| MS.gene059034.t1 | MTR_5g016660 | 32.917 | 240 | 148 | 4 | 10 | 240 | 9 | 244 | 1.19e-38 | 140 |
| MS.gene059034.t1 | MTR_7g070780 | 34.766 | 256 | 136 | 8 | 1 | 238 | 1 | 243 | 1.85e-37 | 137 |
| MS.gene059034.t1 | MTR_7g117405 | 35.043 | 234 | 139 | 5 | 14 | 238 | 15 | 244 | 1.01e-36 | 135 |
| MS.gene059034.t1 | MTR_5g039900 | 32.083 | 240 | 150 | 4 | 10 | 240 | 12 | 247 | 1.48e-36 | 134 |
| MS.gene059034.t1 | MTR_7g070740 | 33.852 | 257 | 137 | 7 | 1 | 238 | 1 | 243 | 9.64e-36 | 132 |
| MS.gene059034.t1 | MTR_6g035295 | 33.471 | 242 | 146 | 5 | 10 | 240 | 11 | 248 | 2.67e-35 | 131 |
| MS.gene059034.t1 | MTR_7g102450 | 35.897 | 234 | 120 | 8 | 16 | 238 | 16 | 230 | 3.83e-35 | 130 |
| MS.gene059034.t1 | MTR_8g066610 | 31.020 | 245 | 152 | 5 | 9 | 240 | 7 | 247 | 4.11e-35 | 130 |
| MS.gene059034.t1 | MTR_7g055710 | 33.071 | 254 | 143 | 7 | 1 | 238 | 1 | 243 | 2.04e-34 | 129 |
| MS.gene059034.t1 | MTR_7g070800 | 33.865 | 251 | 139 | 6 | 6 | 240 | 1 | 240 | 3.15e-34 | 128 |
| MS.gene059034.t1 | MTR_7g070860 | 33.735 | 249 | 138 | 6 | 8 | 240 | 4 | 241 | 2.56e-33 | 125 |
| MS.gene059034.t1 | MTR_7g070930 | 32.231 | 242 | 143 | 5 | 10 | 238 | 13 | 246 | 5.83e-33 | 125 |
| MS.gene059034.t1 | MTR_7g070660 | 31.474 | 251 | 151 | 5 | 1 | 238 | 1 | 243 | 1.58e-32 | 124 |
| MS.gene059034.t1 | MTR_5g045970 | 31.873 | 251 | 135 | 9 | 10 | 238 | 15 | 251 | 2.65e-32 | 123 |
| MS.gene059034.t1 | MTR_5g045960 | 30.453 | 243 | 153 | 6 | 8 | 238 | 6 | 244 | 4.50e-32 | 122 |
| MS.gene059034.t1 | MTR_4g108250 | 31.801 | 261 | 140 | 7 | 1 | 238 | 1 | 246 | 3.34e-31 | 120 |
| MS.gene059034.t1 | MTR_7g071040 | 30.677 | 251 | 153 | 5 | 1 | 238 | 7 | 249 | 1.60e-30 | 118 |
| MS.gene059034.t1 | MTR_7g070910 | 31.452 | 248 | 155 | 6 | 1 | 238 | 1 | 243 | 1.69e-30 | 118 |
| MS.gene059034.t1 | MTR_7g070810 | 31.250 | 240 | 152 | 4 | 8 | 238 | 6 | 241 | 3.99e-30 | 117 |
| MS.gene059034.t1 | MTR_5g040030 | 30.204 | 245 | 153 | 7 | 8 | 240 | 11 | 249 | 6.15e-30 | 116 |
| MS.gene059034.t1 | MTR_7g070610 | 29.134 | 254 | 151 | 6 | 2 | 238 | 4 | 245 | 1.05e-29 | 115 |
| MS.gene059034.t1 | MTR_4g485620 | 29.870 | 231 | 145 | 5 | 23 | 240 | 1 | 227 | 1.85e-29 | 115 |
| MS.gene059034.t1 | MTR_7g070940 | 30.833 | 240 | 153 | 4 | 8 | 238 | 6 | 241 | 2.19e-29 | 115 |
| MS.gene059034.t1 | MTR_7g071050 | 34.737 | 190 | 110 | 4 | 2 | 187 | 4 | 183 | 1.46e-27 | 109 |
| MS.gene059034.t1 | MTR_4g485590 | 32.083 | 240 | 122 | 5 | 12 | 240 | 10 | 219 | 2.24e-27 | 108 |
| MS.gene059034.t1 | MTR_1g062380 | 30.165 | 242 | 147 | 7 | 12 | 238 | 17 | 251 | 3.41e-27 | 108 |
| MS.gene059034.t1 | MTR_7g102490 | 30.204 | 245 | 148 | 8 | 11 | 238 | 7 | 245 | 1.70e-26 | 107 |
| MS.gene059034.t1 | MTR_7g070870 | 30.000 | 240 | 152 | 4 | 8 | 238 | 16 | 248 | 2.27e-26 | 106 |
| MS.gene059034.t1 | MTR_1g040310 | 30.242 | 248 | 154 | 6 | 4 | 240 | 8 | 247 | 9.90e-26 | 105 |
| MS.gene059034.t1 | MTR_7g102560 | 29.461 | 241 | 150 | 9 | 10 | 238 | 8 | 240 | 5.85e-25 | 102 |
| MS.gene059034.t1 | MTR_7g102550 | 27.848 | 237 | 154 | 7 | 14 | 238 | 12 | 243 | 8.61e-25 | 102 |
| MS.gene059034.t1 | MTR_7g039570 | 30.189 | 212 | 131 | 6 | 10 | 209 | 13 | 219 | 1.70e-24 | 98.2 |
| MS.gene059034.t1 | MTR_7g102460 | 30.612 | 245 | 146 | 10 | 11 | 238 | 7 | 244 | 6.10e-24 | 100 |
| MS.gene059034.t1 | MTR_4g024020 | 29.630 | 243 | 153 | 8 | 11 | 238 | 7 | 246 | 1.45e-23 | 99.0 |
| MS.gene059034.t1 | MTR_7g470590 | 37.600 | 125 | 75 | 2 | 1 | 122 | 1 | 125 | 1.44e-21 | 87.0 |
| MS.gene059034.t1 | MTR_7g070570 | 37.600 | 125 | 75 | 2 | 1 | 122 | 1 | 125 | 1.44e-21 | 87.0 |
| MS.gene059034.t1 | MTR_7g102520 | 29.707 | 239 | 146 | 9 | 14 | 238 | 15 | 245 | 8.00e-21 | 90.9 |
| MS.gene059034.t1 | MTR_8g044140 | 28.846 | 208 | 134 | 5 | 40 | 238 | 6 | 208 | 1.96e-20 | 89.7 |
| MS.gene059034.t1 | MTR_4g485640 | 28.070 | 228 | 139 | 6 | 19 | 238 | 217 | 427 | 9.99e-17 | 79.3 |
| MS.gene059034.t1 | MTR_8g068330 | 32.394 | 142 | 85 | 5 | 7 | 144 | 4 | 138 | 1.94e-13 | 69.3 |
| MS.gene059034.t1 | MTR_7g067330 | 27.972 | 143 | 88 | 3 | 8 | 144 | 6 | 139 | 3.73e-11 | 62.8 |
| MS.gene059034.t1 | MTR_8g007650 | 23.868 | 243 | 167 | 6 | 7 | 237 | 3 | 239 | 5.49e-11 | 62.4 |
| MS.gene059034.t1 | MTR_8g007565 | 23.868 | 243 | 167 | 6 | 7 | 237 | 3 | 239 | 5.65e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059034.t1 | AT2G36770 | 33.735 | 249 | 147 | 6 | 5 | 240 | 8 | 251 | 2.21e-36 | 134 |
| MS.gene059034.t1 | AT2G36750 | 32.927 | 246 | 152 | 6 | 5 | 240 | 4 | 246 | 2.07e-35 | 131 |
| MS.gene059034.t1 | AT2G36780 | 33.471 | 242 | 147 | 6 | 10 | 240 | 13 | 251 | 2.92e-33 | 125 |
| MS.gene059034.t1 | AT2G36790 | 32.231 | 242 | 148 | 6 | 9 | 238 | 11 | 248 | 5.65e-33 | 125 |
| MS.gene059034.t1 | AT4G34131 | 30.120 | 249 | 154 | 6 | 8 | 240 | 7 | 251 | 7.35e-33 | 124 |
| MS.gene059034.t1 | AT2G36760 | 31.452 | 248 | 146 | 7 | 9 | 240 | 12 | 251 | 3.06e-31 | 120 |
| MS.gene059034.t1 | AT2G36800 | 30.992 | 242 | 152 | 5 | 9 | 238 | 10 | 248 | 3.46e-31 | 120 |
| MS.gene059034.t1 | AT3G53150 | 31.102 | 254 | 153 | 8 | 1 | 238 | 10 | 257 | 9.60e-31 | 119 |
| MS.gene059034.t1 | AT4G34135 | 28.514 | 249 | 158 | 7 | 8 | 240 | 8 | 252 | 1.03e-29 | 114 |
| MS.gene059034.t1 | AT4G34135 | 28.514 | 249 | 158 | 7 | 8 | 240 | 8 | 252 | 6.12e-29 | 114 |
| MS.gene059034.t1 | AT3G53160 | 32.510 | 243 | 146 | 8 | 9 | 238 | 6 | 243 | 3.52e-28 | 111 |
| MS.gene059034.t1 | AT4G34138 | 28.125 | 256 | 156 | 9 | 4 | 240 | 5 | 251 | 6.00e-27 | 108 |
| MS.gene059034.t1 | AT2G15480 | 25.794 | 252 | 167 | 7 | 5 | 240 | 4 | 251 | 1.67e-26 | 107 |
| MS.gene059034.t1 | AT2G15480 | 25.794 | 252 | 167 | 7 | 5 | 240 | 4 | 251 | 1.73e-26 | 107 |
| MS.gene059034.t1 | AT2G15490 | 27.755 | 245 | 157 | 6 | 12 | 240 | 8 | 248 | 2.49e-26 | 106 |
| MS.gene059034.t1 | AT2G15490 | 28.163 | 245 | 156 | 7 | 12 | 240 | 8 | 248 | 2.83e-26 | 106 |
| MS.gene059034.t1 | AT2G15490 | 29.778 | 225 | 143 | 5 | 12 | 224 | 8 | 229 | 1.32e-25 | 101 |
| MS.gene059034.t1 | AT5G14860 | 27.074 | 229 | 145 | 5 | 14 | 221 | 11 | 238 | 8.52e-16 | 76.6 |
| MS.gene059034.t1 | AT1G06000 | 31.073 | 177 | 111 | 5 | 12 | 181 | 11 | 183 | 2.76e-14 | 72.0 |
| MS.gene059034.t1 | AT5G03490 | 27.311 | 238 | 161 | 7 | 5 | 235 | 13 | 245 | 1.66e-13 | 69.7 |
| MS.gene059034.t1 | AT1G73880 | 27.843 | 255 | 149 | 12 | 5 | 238 | 6 | 246 | 2.31e-13 | 69.3 |
| MS.gene059034.t1 | AT5G49690 | 28.814 | 177 | 118 | 4 | 7 | 182 | 6 | 175 | 1.51e-11 | 63.9 |
| MS.gene059034.t1 | AT1G10400 | 26.772 | 254 | 146 | 11 | 12 | 240 | 8 | 246 | 2.21e-11 | 63.5 |
| MS.gene059034.t1 | AT2G22590 | 27.972 | 143 | 97 | 3 | 10 | 148 | 14 | 154 | 3.85e-11 | 62.8 |
Find 78 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATATGATGAGGAAAATT+TGG | 0.225535 | 2.4:-56112163 | None:intergenic |
| ATTCCGTTAAATGTGATGTT+AGG | 0.275456 | 2.4:-56112043 | None:intergenic |
| TTGTGTCGAGCATCGTTTCT+AGG | 0.310903 | 2.4:-56112222 | None:intergenic |
| TGTTAGGGATCTGAAACTTA+TGG | 0.318193 | 2.4:-56112027 | None:intergenic |
| TTCATTCCATTTCTAGCATC+TGG | 0.324858 | 2.4:+56111668 | MS.gene059034:CDS |
| AAACCACGGGTCACAAAGTT+TGG | 0.347740 | 2.4:+56112320 | MS.gene059034:CDS |
| ATACCCATGGGCTAATGATT+TGG | 0.367133 | 2.4:+56112003 | MS.gene059034:CDS |
| ATCCCTAACATCACATTTAA+CGG | 0.369994 | 2.4:+56112040 | MS.gene059034:CDS |
| TTCTCATATAAATTCTGATT+CGG | 0.385242 | 2.4:+56112120 | MS.gene059034:CDS |
| TGGACCCATTGAGGATTTCA+TGG | 0.385605 | 2.4:+56111943 | MS.gene059034:CDS |
| GGTCACAAAGTTTGGCATCT+TGG | 0.400304 | 2.4:+56112328 | MS.gene059034:CDS |
| GGATTGGACGTTGGAGGGAG+TGG | 0.414768 | 2.4:-56111759 | None:intergenic |
| AGGAATTCAATGATTAACTT+TGG | 0.416716 | 2.4:-56112202 | None:intergenic |
| CCTCTTTGCCGTCTCCCTCA+TGG | 0.425113 | 2.4:+56112069 | MS.gene059034:CDS |
| AACAACTTCAGTGAACTTGA+TGG | 0.430043 | 2.4:+56112271 | MS.gene059034:CDS |
| ATCAGGAAGGCCAACTTGTT+GGG | 0.435056 | 2.4:-56111846 | None:intergenic |
| AGAGAGATTTGGTAAGGGAT+TGG | 0.438721 | 2.4:-56111775 | None:intergenic |
| GTTAGGGATCTGAAACTTAT+GGG | 0.441472 | 2.4:-56112026 | None:intergenic |
| ATATGTCCAGATGCTAGAAA+TGG | 0.452356 | 2.4:-56111674 | None:intergenic |
| CATCAGGAAGGCCAACTTGT+TGG | 0.452771 | 2.4:-56111847 | None:intergenic |
| TTCCGTTAAATGTGATGTTA+GGG | 0.463451 | 2.4:-56112042 | None:intergenic |
| GGTAAGGGATTGGACGTTGG+AGG | 0.465839 | 2.4:-56111765 | None:intergenic |
| CCACCGACTCCACCACATCT+TGG | 0.478304 | 2.4:+56111891 | MS.gene059034:CDS |
| AGCGGCGGATGAGAGAGATT+TGG | 0.482822 | 2.4:-56111786 | None:intergenic |
| AATTCAATGATTAACTTTGG+CGG | 0.488317 | 2.4:-56112199 | None:intergenic |
| ATTCTCCATGAAATCCTCAA+TGG | 0.492298 | 2.4:-56111948 | None:intergenic |
| GGAATGAAGTAAACTTTCAA+TGG | 0.492596 | 2.4:-56111653 | None:intergenic |
| GTAAGGGATTGGACGTTGGA+GGG | 0.494818 | 2.4:-56111764 | None:intergenic |
| TTCTCCATGAAATCCTCAAT+GGG | 0.500037 | 2.4:-56111947 | None:intergenic |
| CGGATGAGAGAGATTTGGTA+AGG | 0.502074 | 2.4:-56111781 | None:intergenic |
| CCTCATCATATCACCTTGTG+TGG | 0.513929 | 2.4:+56112172 | MS.gene059034:CDS |
| GACTGTGACGTGTTGGCCAC+GGG | 0.523267 | 2.4:-56111732 | None:intergenic |
| GACACAGATTCAATGCCATC+AGG | 0.524089 | 2.4:-56111863 | None:intergenic |
| TTTGGTAAGGGATTGGACGT+TGG | 0.533399 | 2.4:-56111768 | None:intergenic |
| CTTCCAAGATGTGGTGGAGT+CGG | 0.541137 | 2.4:-56111894 | None:intergenic |
| CTCTGACGCTGCATACCCAT+GGG | 0.541240 | 2.4:+56111991 | MS.gene059034:CDS |
| AGATGTGGTGGAGTCGGTGG+TGG | 0.542144 | 2.4:-56111888 | None:intergenic |
| TCTCTGACGCTGCATACCCA+TGG | 0.545223 | 2.4:+56111990 | MS.gene059034:CDS |
| GCGTCAGAGATGATACAATC+TGG | 0.550239 | 2.4:-56111977 | None:intergenic |
| GCGAAGGAAGGAGGGAGCGG+CGG | 0.550435 | 2.4:-56111801 | None:intergenic |
| TGACTGTGACGTGTTGGCCA+CGG | 0.551280 | 2.4:-56111733 | None:intergenic |
| GAAGGCCAACTTGTTGGGAG+GGG | 0.552799 | 2.4:-56111841 | None:intergenic |
| GAGGGTCTCCATGAGGGAGA+CGG | 0.554233 | 2.4:-56112077 | None:intergenic |
| GTGTGAAAGCGAAGGAAGGA+GGG | 0.557229 | 2.4:-56111809 | None:intergenic |
| CGTGGCGCAATGCTCCTCCA+TGG | 0.558547 | 2.4:+56111923 | MS.gene059034:CDS |
| AAAGCGAAGGAAGGAGGGAG+CGG | 0.560781 | 2.4:-56111804 | None:intergenic |
| CAACAAGTTGGCCTTCCTGA+TGG | 0.562093 | 2.4:+56111848 | MS.gene059034:CDS |
| TGAAATCCTCAATGGGTCCA+TGG | 0.564035 | 2.4:-56111940 | None:intergenic |
| GGAAGGCCAACTTGTTGGGA+GGG | 0.567130 | 2.4:-56111842 | None:intergenic |
| GCAATTATGTTTGCATCCCG+TGG | 0.572148 | 2.4:+56111716 | MS.gene059034:CDS |
| CCACACAAGGTGATATGATG+AGG | 0.573323 | 2.4:-56112172 | None:intergenic |
| GCTCCTCCATGGACCCATTG+AGG | 0.577302 | 2.4:+56111934 | MS.gene059034:CDS |
| AGTGTGAAAGCGAAGGAAGG+AGG | 0.578480 | 2.4:-56111810 | None:intergenic |
| ATAATTGCTATGTCAAGAAG+AGG | 0.578787 | 2.4:-56111701 | None:intergenic |
| GACAGTGTGAAAGCGAAGGA+AGG | 0.579335 | 2.4:-56111813 | None:intergenic |
| AGGAAAATTTGGAACGACAA+AGG | 0.584634 | 2.4:-56112152 | None:intergenic |
| TGGGCCAAATCATTAGCCCA+TGG | 0.584839 | 2.4:-56112007 | None:intergenic |
| AGGAAGGCCAACTTGTTGGG+AGG | 0.588353 | 2.4:-56111843 | None:intergenic |
| GACTTCCCCTCCCAACAAGT+TGG | 0.588648 | 2.4:+56111836 | MS.gene059034:CDS |
| ATGCCAAACTTTGTGACCCG+TGG | 0.603889 | 2.4:-56112323 | None:intergenic |
| GGGCCAAATCATTAGCCCAT+GGG | 0.607549 | 2.4:-56112006 | None:intergenic |
| CATGGAGGAGCATTGCGCCA+CGG | 0.612634 | 2.4:-56111922 | None:intergenic |
| ACGGTGGATCTTCCAAGATG+TGG | 0.612832 | 2.4:-56111903 | None:intergenic |
| GGATGAGAGAGATTTGGTAA+GGG | 0.615398 | 2.4:-56111780 | None:intergenic |
| GTGGATCTTCCAAGATGTGG+TGG | 0.616198 | 2.4:-56111900 | None:intergenic |
| CAGATTCAATGCCATCAGGA+AGG | 0.628953 | 2.4:-56111859 | None:intergenic |
| CCAAGATGTGGTGGAGTCGG+TGG | 0.631555 | 2.4:-56111891 | None:intergenic |
| ATATATTGTTCAGCAATGGA+AGG | 0.640847 | 2.4:+56111614 | None:intergenic |
| CAACACTACGAGAAAACCAC+GGG | 0.646166 | 2.4:+56112307 | MS.gene059034:CDS |
| TAATTGCTATGTCAAGAAGA+GGG | 0.646353 | 2.4:-56111700 | None:intergenic |
| TCAGAGATGATACAATCTGG+TGG | 0.654575 | 2.4:-56111974 | None:intergenic |
| TGGTGATGACTGTGACGTGT+TGG | 0.655109 | 2.4:-56111739 | None:intergenic |
| AGTCGACAGTGTGAAAGCGA+AGG | 0.660325 | 2.4:-56111817 | None:intergenic |
| CCATGAGGGAGACGGCAAAG+AGG | 0.671090 | 2.4:-56112069 | None:intergenic |
| GGAGGAGCATTGCGCCACGG+TGG | 0.675879 | 2.4:-56111919 | None:intergenic |
| CCAACACTACGAGAAAACCA+CGG | 0.719836 | 2.4:+56112306 | MS.gene059034:CDS |
| AATCCTCAATGGGTCCATGG+AGG | 0.729822 | 2.4:-56111937 | None:intergenic |
| ACATCTTGGAAGATCCACCG+TGG | 0.815972 | 2.4:+56111905 | MS.gene059034:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTCATATAAATTCTGATT+CGG | + | chr2.4:56112120-56112139 | MS.gene059034:CDS | 20.0% |
| !!! | AAGTAAATTGTTTGTTTTGA+GGG | - | chr2.4:56112098-56112117 | None:intergenic | 20.0% |
| !!! | TAAGTAAATTGTTTGTTTTG+AGG | - | chr2.4:56112099-56112118 | None:intergenic | 20.0% |
| ! | AATTCAATGATTAACTTTGG+CGG | - | chr2.4:56112202-56112221 | None:intergenic | 25.0% |
| ! | AGGAATTCAATGATTAACTT+TGG | - | chr2.4:56112205-56112224 | None:intergenic | 25.0% |
| ATAATTGCTATGTCAAGAAG+AGG | - | chr2.4:56111704-56111723 | None:intergenic | 30.0% | |
| ATCCCTAACATCACATTTAA+CGG | + | chr2.4:56112040-56112059 | MS.gene059034:CDS | 30.0% | |
| ATTCCGTTAAATGTGATGTT+AGG | - | chr2.4:56112046-56112065 | None:intergenic | 30.0% | |
| GGAATGAAGTAAACTTTCAA+TGG | - | chr2.4:56111656-56111675 | None:intergenic | 30.0% | |
| GTGATATGATGAGGAAAATT+TGG | - | chr2.4:56112166-56112185 | None:intergenic | 30.0% | |
| TAATTGCTATGTCAAGAAGA+GGG | - | chr2.4:56111703-56111722 | None:intergenic | 30.0% | |
| TTCCGTTAAATGTGATGTTA+GGG | - | chr2.4:56112045-56112064 | None:intergenic | 30.0% | |
| AACAACTTCAGTGAACTTGA+TGG | + | chr2.4:56112271-56112290 | MS.gene059034:CDS | 35.0% | |
| ATATGTCCAGATGCTAGAAA+TGG | - | chr2.4:56111677-56111696 | None:intergenic | 35.0% | |
| ATTCTCCATGAAATCCTCAA+TGG | - | chr2.4:56111951-56111970 | None:intergenic | 35.0% | |
| TTCTCCATGAAATCCTCAAT+GGG | - | chr2.4:56111950-56111969 | None:intergenic | 35.0% | |
| ! | AGGAAAATTTGGAACGACAA+AGG | - | chr2.4:56112155-56112174 | None:intergenic | 35.0% |
| ! | GTTAGGGATCTGAAACTTAT+GGG | - | chr2.4:56112029-56112048 | None:intergenic | 35.0% |
| ! | TGTTAGGGATCTGAAACTTA+TGG | - | chr2.4:56112030-56112049 | None:intergenic | 35.0% |
| !! | TTCATTCCATTTCTAGCATC+TGG | + | chr2.4:56111668-56111687 | MS.gene059034:CDS | 35.0% |
| TCAGAGATGATACAATCTGG+TGG | - | chr2.4:56111977-56111996 | None:intergenic | 40.0% | |
| ! | AGAGAGATTTGGTAAGGGAT+TGG | - | chr2.4:56111778-56111797 | None:intergenic | 40.0% |
| ! | ATACCCATGGGCTAATGATT+TGG | + | chr2.4:56112003-56112022 | MS.gene059034:CDS | 40.0% |
| ! | GGATGAGAGAGATTTGGTAA+GGG | - | chr2.4:56111783-56111802 | None:intergenic | 40.0% |
| AAACCACGGGTCACAAAGTT+TGG | + | chr2.4:56112320-56112339 | MS.gene059034:CDS | 45.0% | |
| CAACACTACGAGAAAACCAC+GGG | + | chr2.4:56112307-56112326 | MS.gene059034:CDS | 45.0% | |
| CAGATTCAATGCCATCAGGA+AGG | - | chr2.4:56111862-56111881 | None:intergenic | 45.0% | |
| CCAACACTACGAGAAAACCA+CGG | + | chr2.4:56112306-56112325 | MS.gene059034:CDS | 45.0% | |
| CCACACAAGGTGATATGATG+AGG | - | chr2.4:56112175-56112194 | None:intergenic | 45.0% | |
| CCTCATCATATCACCTTGTG+TGG | + | chr2.4:56112172-56112191 | MS.gene059034:CDS | 45.0% | |
| GACACAGATTCAATGCCATC+AGG | - | chr2.4:56111866-56111885 | None:intergenic | 45.0% | |
| GCAATTATGTTTGCATCCCG+TGG | + | chr2.4:56111716-56111735 | MS.gene059034:CDS | 45.0% | |
| GCGTCAGAGATGATACAATC+TGG | - | chr2.4:56111980-56111999 | None:intergenic | 45.0% | |
| TGAAATCCTCAATGGGTCCA+TGG | - | chr2.4:56111943-56111962 | None:intergenic | 45.0% | |
| TGGACCCATTGAGGATTTCA+TGG | + | chr2.4:56111943-56111962 | MS.gene059034:CDS | 45.0% | |
| TTTGGTAAGGGATTGGACGT+TGG | - | chr2.4:56111771-56111790 | None:intergenic | 45.0% | |
| ! | ATCAGGAAGGCCAACTTGTT+GGG | - | chr2.4:56111849-56111868 | None:intergenic | 45.0% |
| ! | CGGATGAGAGAGATTTGGTA+AGG | - | chr2.4:56111784-56111803 | None:intergenic | 45.0% |
| ! | TTGTGTCGAGCATCGTTTCT+AGG | - | chr2.4:56112225-56112244 | None:intergenic | 45.0% |
| !!! | TGTTTTGAGGGTCTCCATGA+GGG | - | chr2.4:56112086-56112105 | None:intergenic | 45.0% |
| !!! | TTGTTTTGAGGGTCTCCATG+AGG | - | chr2.4:56112087-56112106 | None:intergenic | 45.0% |
| AATCCTCAATGGGTCCATGG+AGG | - | chr2.4:56111940-56111959 | None:intergenic | 50.0% | |
| ACATCTTGGAAGATCCACCG+TGG | + | chr2.4:56111905-56111924 | MS.gene059034:CDS | 50.0% | |
| ACGGTGGATCTTCCAAGATG+TGG | - | chr2.4:56111906-56111925 | None:intergenic | 50.0% | |
| AGTCGACAGTGTGAAAGCGA+AGG | - | chr2.4:56111820-56111839 | None:intergenic | 50.0% | |
| AGTGTGAAAGCGAAGGAAGG+AGG | - | chr2.4:56111813-56111832 | None:intergenic | 50.0% | |
| ATGCCAAACTTTGTGACCCG+TGG | - | chr2.4:56112326-56112345 | None:intergenic | 50.0% | |
| CATCAGGAAGGCCAACTTGT+TGG | - | chr2.4:56111850-56111869 | None:intergenic | 50.0% | |
| GACAGTGTGAAAGCGAAGGA+AGG | - | chr2.4:56111816-56111835 | None:intergenic | 50.0% | |
| GGGCCAAATCATTAGCCCAT+GGG | - | chr2.4:56112009-56112028 | None:intergenic | 50.0% | |
| GTAAGGGATTGGACGTTGGA+GGG | - | chr2.4:56111767-56111786 | None:intergenic | 50.0% | |
| GTGGATCTTCCAAGATGTGG+TGG | - | chr2.4:56111903-56111922 | None:intergenic | 50.0% | |
| GTGTGAAAGCGAAGGAAGGA+GGG | - | chr2.4:56111812-56111831 | None:intergenic | 50.0% | |
| TGGGCCAAATCATTAGCCCA+TGG | - | chr2.4:56112010-56112029 | None:intergenic | 50.0% | |
| ! | CCGTGGTTTTCTCGTAGTGT+TGG | - | chr2.4:56112309-56112328 | None:intergenic | 50.0% |
| ! | CTTCCAAGATGTGGTGGAGT+CGG | - | chr2.4:56111897-56111916 | None:intergenic | 50.0% |
| ! | CTTTGGCGGTTTTCCACACA+AGG | - | chr2.4:56112188-56112207 | None:intergenic | 50.0% |
| ! | TGGTGATGACTGTGACGTGT+TGG | - | chr2.4:56111742-56111761 | None:intergenic | 50.0% |
| !! | CAACAAGTTGGCCTTCCTGA+TGG | + | chr2.4:56111848-56111867 | MS.gene059034:CDS | 50.0% |
| AAAGCGAAGGAAGGAGGGAG+CGG | - | chr2.4:56111807-56111826 | None:intergenic | 55.0% | |
| AGCGGCGGATGAGAGAGATT+TGG | - | chr2.4:56111789-56111808 | None:intergenic | 55.0% | |
| CTCTGACGCTGCATACCCAT+GGG | + | chr2.4:56111991-56112010 | MS.gene059034:CDS | 55.0% | |
| GACTTCCCCTCCCAACAAGT+TGG | + | chr2.4:56111836-56111855 | MS.gene059034:CDS | 55.0% | |
| GGTAAGGGATTGGACGTTGG+AGG | - | chr2.4:56111768-56111787 | None:intergenic | 55.0% | |
| TCTCTGACGCTGCATACCCA+TGG | + | chr2.4:56111990-56112009 | MS.gene059034:CDS | 55.0% | |
| ! | TGACTGTGACGTGTTGGCCA+CGG | - | chr2.4:56111736-56111755 | None:intergenic | 55.0% |
| !! | AGGAAGGCCAACTTGTTGGG+AGG | - | chr2.4:56111846-56111865 | None:intergenic | 55.0% |
| !! | GAAGGCCAACTTGTTGGGAG+GGG | - | chr2.4:56111844-56111863 | None:intergenic | 55.0% |
| !! | GGAAGGCCAACTTGTTGGGA+GGG | - | chr2.4:56111845-56111864 | None:intergenic | 55.0% |
| CCATGAGGGAGACGGCAAAG+AGG | - | chr2.4:56112072-56112091 | None:intergenic | 60.0% | |
| CCTCTTTGCCGTCTCCCTCA+TGG | + | chr2.4:56112069-56112088 | MS.gene059034:CDS | 60.0% | |
| GAGGGTCTCCATGAGGGAGA+CGG | - | chr2.4:56112080-56112099 | None:intergenic | 60.0% | |
| GCTCCTCCATGGACCCATTG+AGG | + | chr2.4:56111934-56111953 | MS.gene059034:CDS | 60.0% | |
| GGATTGGACGTTGGAGGGAG+TGG | - | chr2.4:56111762-56111781 | None:intergenic | 60.0% | |
| ! | AGATGTGGTGGAGTCGGTGG+TGG | - | chr2.4:56111891-56111910 | None:intergenic | 60.0% |
| ! | CCAAGATGTGGTGGAGTCGG+TGG | - | chr2.4:56111894-56111913 | None:intergenic | 60.0% |
| ! | GACTGTGACGTGTTGGCCAC+GGG | - | chr2.4:56111735-56111754 | None:intergenic | 60.0% |
| !! | CATGGAGGAGCATTGCGCCA+CGG | - | chr2.4:56111925-56111944 | None:intergenic | 60.0% |
| !! | CCACCGACTCCACCACATCT+TGG | + | chr2.4:56111891-56111910 | MS.gene059034:CDS | 60.0% |
| CGTGGCGCAATGCTCCTCCA+TGG | + | chr2.4:56111923-56111942 | MS.gene059034:CDS | 65.0% | |
| GCGAAGGAAGGAGGGAGCGG+CGG | - | chr2.4:56111804-56111823 | None:intergenic | 70.0% | |
| !! | GGAGGAGCATTGCGCCACGG+TGG | - | chr2.4:56111922-56111941 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 56111629 | 56112349 | 56111629 | ID=MS.gene059034 |
| chr2.4 | mRNA | 56111629 | 56112349 | 56111629 | ID=MS.gene059034.t1;Parent=MS.gene059034 |
| chr2.4 | exon | 56111629 | 56112349 | 56111629 | ID=MS.gene059034.t1.exon1;Parent=MS.gene059034.t1 |
| chr2.4 | CDS | 56111629 | 56112349 | 56111629 | ID=cds.MS.gene059034.t1;Parent=MS.gene059034.t1 |
| Gene Sequence |
| Protein sequence |
