Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073338.t1 | XP_003610026.1 | 97.8 | 624 | 14 | 0 | 1 | 624 | 1 | 624 | 1.30E-291 | 1011.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073338.t1 | Q9LU77 | 69.1 | 648 | 174 | 11 | 1 | 624 | 1 | 646 | 1.1e-216 | 754.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073338.t1 | Q84YG8 | 97.8 | 624 | 14 | 0 | 1 | 624 | 1 | 624 | 9.2e-292 | 1011.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054742 | MS.gene073338 | 0.802697 | 4.96E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073338 | MS.gene026690 | PPI |
| MS.gene073338 | MS.gene32322 | PPI |
| MS.gene073338 | MS.gene31845 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073338.t1 | MTR_4g127100 | 98.558 | 624 | 9 | 0 | 1 | 624 | 1 | 624 | 0.0 | 1271 |
| MS.gene073338.t1 | MTR_4g127100 | 98.295 | 528 | 9 | 0 | 1 | 528 | 1 | 528 | 0.0 | 1077 |
| MS.gene073338.t1 | MTR_4g127090 | 73.968 | 630 | 94 | 7 | 1 | 624 | 1 | 566 | 0.0 | 907 |
| MS.gene073338.t1 | MTR_4g084870 | 57.456 | 684 | 205 | 15 | 1 | 624 | 1 | 658 | 0.0 | 724 |
| MS.gene073338.t1 | MTR_6g069510 | 59.351 | 647 | 196 | 12 | 1 | 624 | 1 | 603 | 0.0 | 719 |
| MS.gene073338.t1 | MTR_7g089360 | 60.539 | 631 | 201 | 11 | 1 | 624 | 1 | 590 | 0.0 | 695 |
| MS.gene073338.t1 | MTR_1g030890 | 58.257 | 654 | 209 | 12 | 1 | 624 | 1 | 620 | 0.0 | 691 |
| MS.gene073338.t1 | MTR_7g089360 | 59.194 | 620 | 205 | 11 | 1 | 613 | 1 | 579 | 0.0 | 661 |
| MS.gene073338.t1 | MTR_8g107360 | 57.257 | 627 | 161 | 14 | 1 | 624 | 1 | 523 | 0.0 | 652 |
| MS.gene073338.t1 | MTR_1g030890 | 53.777 | 556 | 193 | 12 | 1 | 526 | 1 | 522 | 3.44e-179 | 518 |
| MS.gene073338.t1 | MTR_1g029190 | 48.413 | 630 | 215 | 20 | 1 | 624 | 1 | 526 | 2.08e-167 | 488 |
| MS.gene073338.t1 | MTR_2g038470 | 43.243 | 629 | 229 | 13 | 1 | 623 | 1 | 507 | 5.64e-152 | 448 |
| MS.gene073338.t1 | MTR_7g009370 | 52.970 | 202 | 85 | 2 | 423 | 624 | 165 | 356 | 6.15e-59 | 201 |
| MS.gene073338.t1 | MTR_7g009370 | 54.658 | 161 | 68 | 2 | 1 | 159 | 1 | 158 | 5.00e-48 | 172 |
| MS.gene073338.t1 | MTR_6g011400 | 52.717 | 184 | 87 | 0 | 440 | 623 | 176 | 359 | 1.43e-58 | 201 |
| MS.gene073338.t1 | MTR_6g011400 | 55.696 | 158 | 70 | 0 | 1 | 158 | 1 | 158 | 5.71e-50 | 177 |
| MS.gene073338.t1 | MTR_7g079720 | 45.918 | 196 | 94 | 2 | 435 | 623 | 169 | 359 | 8.34e-53 | 185 |
| MS.gene073338.t1 | MTR_7g079720 | 49.359 | 156 | 78 | 1 | 1 | 156 | 1 | 155 | 1.34e-47 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073338.t1 | AT5G57090 | 74.846 | 648 | 137 | 11 | 1 | 624 | 1 | 646 | 0.0 | 935 |
| MS.gene073338.t1 | AT5G57090 | 72.711 | 546 | 124 | 10 | 103 | 624 | 2 | 546 | 0.0 | 751 |
| MS.gene073338.t1 | AT1G70940 | 58.321 | 667 | 207 | 14 | 1 | 624 | 1 | 639 | 0.0 | 705 |
| MS.gene073338.t1 | AT1G23080 | 59.380 | 645 | 210 | 12 | 1 | 624 | 1 | 614 | 0.0 | 704 |
| MS.gene073338.t1 | AT1G23080 | 59.380 | 645 | 210 | 12 | 1 | 624 | 1 | 614 | 0.0 | 704 |
| MS.gene073338.t1 | AT2G01420 | 58.025 | 648 | 215 | 12 | 1 | 624 | 1 | 615 | 0.0 | 702 |
| MS.gene073338.t1 | AT2G01420 | 58.733 | 647 | 208 | 13 | 1 | 624 | 1 | 611 | 0.0 | 701 |
| MS.gene073338.t1 | AT1G23080 | 58.860 | 649 | 211 | 12 | 1 | 624 | 1 | 618 | 0.0 | 699 |
| MS.gene073338.t1 | AT1G73590 | 59.351 | 647 | 214 | 14 | 1 | 624 | 1 | 621 | 0.0 | 688 |
| MS.gene073338.t1 | AT1G23080 | 55.393 | 547 | 192 | 12 | 1 | 526 | 1 | 516 | 0.0 | 549 |
| MS.gene073338.t1 | AT2G01420 | 54.364 | 550 | 194 | 12 | 1 | 526 | 1 | 517 | 0.0 | 538 |
| MS.gene073338.t1 | AT1G77110 | 45.891 | 645 | 252 | 15 | 1 | 624 | 1 | 569 | 1.33e-172 | 503 |
| MS.gene073338.t1 | AT1G77110 | 44.872 | 624 | 247 | 15 | 1 | 603 | 1 | 548 | 7.04e-160 | 470 |
| MS.gene073338.t1 | AT5G15100 | 59.877 | 162 | 65 | 0 | 462 | 623 | 204 | 365 | 1.17e-58 | 201 |
| MS.gene073338.t1 | AT5G15100 | 47.458 | 177 | 84 | 2 | 1 | 173 | 1 | 172 | 3.78e-43 | 159 |
| MS.gene073338.t1 | AT5G16530 | 53.595 | 153 | 71 | 0 | 471 | 623 | 195 | 347 | 5.21e-52 | 183 |
| MS.gene073338.t1 | AT5G16530 | 44.878 | 205 | 100 | 3 | 1 | 205 | 1 | 192 | 3.25e-50 | 178 |
| MS.gene073338.t1 | AT5G16530 | 44.878 | 205 | 100 | 3 | 1 | 205 | 1 | 192 | 1.22e-50 | 178 |
| MS.gene073338.t1 | AT5G16530 | 52.985 | 134 | 63 | 0 | 471 | 604 | 195 | 328 | 6.66e-44 | 160 |
Find 140 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCAAATCCTATGCTTTC+TGG | 0.083914 | 8.3:-3936847 | MS.gene073338:CDS |
| AAAGCTGCTTCTACTGATTT+TGG | 0.151528 | 8.3:-3936682 | MS.gene073338:CDS |
| GTGGCGTCATATTATTTAAA+TGG | 0.167054 | 8.3:+3937175 | None:intergenic |
| TCTGACGTTGTTTCGCTTAA+TGG | 0.202697 | 8.3:-3937306 | MS.gene073338:CDS |
| GTTATAGAAGCTGCAGTTTC+AGG | 0.222137 | 8.3:+3937345 | None:intergenic |
| GAAATGCCATCTATTGTAAA+AGG | 0.235112 | 8.3:-3936035 | MS.gene073338:CDS |
| TTTGGTCTCTTGTATCATTT+AGG | 0.244094 | 8.3:-3936165 | MS.gene073338:intron |
| ATAAGACTTGAGTAGGTATT+AGG | 0.244249 | 8.3:+3936196 | None:intergenic |
| CACCCAGTACTGAGTATATT+TGG | 0.250618 | 8.3:+3935559 | None:intergenic |
| AATACCTACTCAAGTCTTAT+AGG | 0.254018 | 8.3:-3936193 | MS.gene073338:CDS |
| TTAAGATTCCCTTCGGAAAT+AGG | 0.258413 | 8.3:+3936718 | None:intergenic |
| TTGTGTTGCAGGGTTATATT+TGG | 0.267057 | 8.3:-3935432 | MS.gene073338:intron |
| CTTCCAAGTCCATCTTCTTC+TGG | 0.279820 | 8.3:+3936314 | None:intergenic |
| ATGTGCAACTCCTTGTTATT+AGG | 0.280094 | 8.3:+3936766 | None:intergenic |
| CTATTTGTGTATCCGTGTTT+TGG | 0.282706 | 8.3:+3937030 | None:intergenic |
| TTGTTCTGCAAAGTGTTATT+TGG | 0.283570 | 8.3:-3937431 | MS.gene073338:CDS |
| CTTCAAACTGATGCTGAAAT+AGG | 0.286348 | 8.3:-3937273 | MS.gene073338:CDS |
| TCTTCCTAACACACTTGTTA+TGG | 0.291487 | 8.3:-3937514 | MS.gene073338:CDS |
| GATCATTGGAAGATATAAAA+TGG | 0.291739 | 8.3:+3937676 | None:intergenic |
| ATCTTCTTCTGGCTAATATA+TGG | 0.325305 | 8.3:+3936325 | None:intergenic |
| ATACTCTACTATGTGCTTCT+TGG | 0.327447 | 8.3:-3935384 | MS.gene073338:CDS |
| CTTACATGTTGCAATTGTTC+AGG | 0.334263 | 8.3:-3935743 | MS.gene073338:intron |
| TGGATGGAGATTGTATTCTT+TGG | 0.334269 | 8.3:+3935579 | None:intergenic |
| CTTCCTAACACACTTGTTAT+GGG | 0.344721 | 8.3:-3937513 | MS.gene073338:CDS |
| CACATAGTAGAGTATTGTTA+TGG | 0.345910 | 8.3:+3935392 | None:intergenic |
| TGAATATGCAGGTCTGTTCA+TGG | 0.369728 | 8.3:-3935890 | MS.gene073338:intron |
| GAACCAGAAAGCATAGGATT+TGG | 0.370922 | 8.3:+3936844 | None:intergenic |
| AAGATCAACTACTAACTCTA+TGG | 0.372841 | 8.3:-3937220 | MS.gene073338:CDS |
| GACTCATCCTTATCATGGTT+TGG | 0.377147 | 8.3:-3936237 | MS.gene073338:CDS |
| GATAGCATGGGTGGTGGAAA+TGG | 0.382932 | 8.3:-3936796 | MS.gene073338:CDS |
| CAAGTCTTATAGGACTTGTT+TGG | 0.388260 | 8.3:-3936183 | MS.gene073338:CDS |
| AGGAGTTGCACATGTTTGTT+TGG | 0.388483 | 8.3:-3936756 | MS.gene073338:CDS |
| ACTACTAACTCTATGGTATC+TGG | 0.400134 | 8.3:-3937213 | MS.gene073338:CDS |
| TGGCGTCATATTATTTAAAT+GGG | 0.400508 | 8.3:+3937176 | None:intergenic |
| AGATGGACTTGGAAGGAGGA+GGG | 0.406669 | 8.3:-3936306 | MS.gene073338:CDS |
| TTCACACCAGATCAATGTTC+TGG | 0.419637 | 8.3:-3937744 | MS.gene073338:CDS |
| ATTCCCATAACAAGTGTGTT+AGG | 0.421389 | 8.3:+3937510 | None:intergenic |
| ATTCATAGCATAAGGATCAT+TGG | 0.433457 | 8.3:+3937662 | None:intergenic |
| TGCATAAGAAGAGGGGAGGG+AGG | 0.434830 | 8.3:-3936912 | MS.gene073338:CDS |
| CATCCAAATATACTCAGTAC+TGG | 0.436602 | 8.3:-3935562 | MS.gene073338:CDS |
| ATACTGTCTGATGCTGGTCT+TGG | 0.436774 | 8.3:-3936002 | MS.gene073338:CDS |
| AGACCTCGGAGTAGCCCCTT+TGG | 0.441905 | 8.3:+3936963 | None:intergenic |
| AGTCTTGTCATAACACTTGC+TGG | 0.442208 | 8.3:+3936256 | None:intergenic |
| CACAAAGGGAACAATACCTT+GGG | 0.446341 | 8.3:+3935606 | None:intergenic |
| GACAAGACTCATCCTTATCA+TGG | 0.446845 | 8.3:-3936242 | MS.gene073338:CDS |
| TGTGTTAGGAAGAGTTGAAA+GGG | 0.446908 | 8.3:+3937524 | None:intergenic |
| AAAACCAAGATAGTCTTGAT+TGG | 0.448110 | 8.3:-3937563 | MS.gene073338:CDS |
| AAACTAGATCCTCTTGGAGT+TGG | 0.454124 | 8.3:+3937099 | None:intergenic |
| CTATCTATAACCATGATTAC+CGG | 0.459673 | 8.3:-3937855 | None:intergenic |
| AAGATGGACTTGGAAGGAGG+AGG | 0.460717 | 8.3:-3936307 | MS.gene073338:CDS |
| ACGCATACCAATTGCTATTG+AGG | 0.461284 | 8.3:+3935774 | None:intergenic |
| GTGAATCAGCTGCTAAGAAA+TGG | 0.462800 | 8.3:+3937637 | None:intergenic |
| CTTTCTGGTTCTACAAGTGC+TGG | 0.462832 | 8.3:-3936832 | MS.gene073338:CDS |
| AAATGGTAATTCATAGCATA+AGG | 0.463466 | 8.3:+3937654 | None:intergenic |
| TTTCCACATGCAATCAGCTT+AGG | 0.466851 | 8.3:+3935859 | None:intergenic |
| AGTGGTGAGTTGTTCAATAA+TGG | 0.467127 | 8.3:-3936883 | MS.gene073338:CDS |
| CGGCGCTTTACTTTGAAACA+TGG | 0.467403 | 8.3:+3937056 | None:intergenic |
| TGCATGTTTAAGATTCCCTT+CGG | 0.467611 | 8.3:+3936711 | None:intergenic |
| ATTCTATGCAATCTTCCAAA+GGG | 0.470349 | 8.3:-3936978 | MS.gene073338:CDS |
| TAGTCCAATCAAGACTATCT+TGG | 0.470572 | 8.3:+3937559 | None:intergenic |
| ATCTCAATACTGTCTGATGC+TGG | 0.484824 | 8.3:-3936008 | MS.gene073338:CDS |
| GATGGACTTGGAAGGAGGAG+GGG | 0.487071 | 8.3:-3936305 | MS.gene073338:CDS |
| GCGGCAACCTCAATAGCAAT+TGG | 0.493077 | 8.3:-3935781 | MS.gene073338:CDS |
| ACATAGTAGAGTATTGTTAT+GGG | 0.493323 | 8.3:+3935393 | None:intergenic |
| ATTTCAACATCCCTTTGTCT+AGG | 0.495176 | 8.3:+3936367 | None:intergenic |
| AATATCATAGCAACATATAG+TGG | 0.496035 | 8.3:+3937798 | None:intergenic |
| GAGGTTGCCGCAATCACAGC+TGG | 0.497964 | 8.3:+3935793 | None:intergenic |
| ACAAAGGGATGTTGAAATTG+AGG | 0.498259 | 8.3:-3936362 | MS.gene073338:CDS |
| TTTATACCAGAACATTGATC+TGG | 0.498746 | 8.3:+3937738 | None:intergenic |
| GTGTGTTAGGAAGAGTTGAA+AGG | 0.500046 | 8.3:+3937523 | None:intergenic |
| TGCCGCAATCACAGCTGGAC+CGG | 0.500587 | 8.3:+3935798 | None:intergenic |
| TATTCTTTGGCAAACACAAA+GGG | 0.501329 | 8.3:+3935592 | None:intergenic |
| CCAGAAAGCATAGGATTTGG+AGG | 0.501646 | 8.3:+3936847 | None:intergenic |
| TGGTTAAAACTAGATCCTCT+TGG | 0.501747 | 8.3:+3937093 | None:intergenic |
| CATACGGTTCAGTTCGTTGG+TGG | 0.502544 | 8.3:-3937773 | MS.gene073338:CDS |
| GAAAATACCGTTGCATCAAA+AGG | 0.506036 | 8.3:-3936628 | MS.gene073338:intron |
| ATATATTAGCCAGAAGAAGA+TGG | 0.507802 | 8.3:-3936323 | MS.gene073338:CDS |
| TATATCCTTACCGGTAATCA+TGG | 0.512246 | 8.3:+3937845 | None:intergenic |
| CCACGAGCTTCAAATCTAAC+CGG | 0.512403 | 8.3:-3937156 | MS.gene073338:CDS |
| TAGCATACGGTTCAGTTCGT+TGG | 0.514377 | 8.3:-3937776 | MS.gene073338:CDS |
| GGATGCATAAGAAGAGGGGA+GGG | 0.515503 | 8.3:-3936915 | MS.gene073338:CDS |
| CACAAAGAAGAAAGATAGCA+TGG | 0.528645 | 8.3:-3936809 | MS.gene073338:CDS |
| GTCTGATGCTGGTCTTGGAA+TGG | 0.532632 | 8.3:-3935997 | MS.gene073338:CDS |
| TATTCTATGCAATCTTCCAA+AGG | 0.533077 | 8.3:-3936979 | MS.gene073338:CDS |
| TAGCCAGAAGAAGATGGACT+TGG | 0.535792 | 8.3:-3936317 | MS.gene073338:CDS |
| ATGGGTGGTGGAAATGGTAA+TGG | 0.538764 | 8.3:-3936790 | MS.gene073338:CDS |
| AGGATGCATAAGAAGAGGGG+AGG | 0.538999 | 8.3:-3936916 | MS.gene073338:CDS |
| AACATCGTATATATCCTTAC+CGG | 0.540847 | 8.3:+3937836 | None:intergenic |
| GCTATGTATGGTGATTTCTC+AGG | 0.545619 | 8.3:-3937474 | MS.gene073338:CDS |
| AGGGGAGGGAGGAGTATGAG+TGG | 0.545646 | 8.3:-3936901 | MS.gene073338:CDS |
| TCATGTGGAACATATTTGGA+AGG | 0.549434 | 8.3:+3936649 | None:intergenic |
| TATAACCATGATTACCGGTA+AGG | 0.552385 | 8.3:-3937850 | None:intergenic |
| AAGAAAGATAGCATGGGTGG+TGG | 0.552901 | 8.3:-3936802 | MS.gene073338:CDS |
| GAACATGAGTCCTAGACAAA+GGG | 0.557185 | 8.3:-3936377 | MS.gene073338:CDS |
| TCTTCGAAATTTGAAGACCT+CGG | 0.557299 | 8.3:+3936949 | None:intergenic |
| ACACAAAGGGAACAATACCT+TGG | 0.558237 | 8.3:+3935605 | None:intergenic |
| ATTTCAGCATCAGTTTGAAG+TGG | 0.563565 | 8.3:+3937276 | None:intergenic |
| ATTGAGGATGCATAAGAAGA+GGG | 0.564904 | 8.3:-3936920 | MS.gene073338:CDS |
| AGTGCTTCACCTATTTCCGA+AGG | 0.569824 | 8.3:-3936727 | MS.gene073338:CDS |
| GACCGGTCCAGCTGTGATTG+CGG | 0.570068 | 8.3:-3935800 | MS.gene073338:CDS |
| ATAAAATGGAAAGATAGTAA+TGG | 0.571283 | 8.3:+3937690 | None:intergenic |
| GGAATGGCCATGTTCAGTCT+AGG | 0.576547 | 8.3:-3935981 | MS.gene073338:intron |
| GATGCTGAAATAGGTGAAGA+TGG | 0.576751 | 8.3:-3937264 | MS.gene073338:CDS |
| AAGTCCTATAAGACTTGAGT+AGG | 0.579378 | 8.3:+3936189 | None:intergenic |
| ATGGCTGTAAGGTTCTTGAC+CGG | 0.579568 | 8.3:-3935817 | MS.gene073338:CDS |
| GAAAGCATAGGATTTGGAGG+AGG | 0.582023 | 8.3:+3936850 | None:intergenic |
| ATTTCGAAGATGAGACATTG+AGG | 0.583231 | 8.3:-3936936 | MS.gene073338:CDS |
| AGCATCAGACAGTATTGAGA+TGG | 0.585685 | 8.3:+3936010 | None:intergenic |
| CATACATAGCTCTTAAAAGA+GGG | 0.587601 | 8.3:+3937487 | None:intergenic |
| GTATTCTTTGGCAAACACAA+AGG | 0.589188 | 8.3:+3935591 | None:intergenic |
| CCATACATAGCTCTTAAAAG+AGG | 0.589751 | 8.3:+3937486 | None:intergenic |
| GTTGCTATGATATTAGCATA+CGG | 0.591499 | 8.3:-3937789 | MS.gene073338:CDS |
| TCAATAGCAATTGGTATGCG+TGG | 0.591915 | 8.3:-3935772 | MS.gene073338:CDS |
| CATTGAGGATGCATAAGAAG+AGG | 0.595513 | 8.3:-3936921 | MS.gene073338:CDS |
| ATCCAAATATACTCAGTACT+GGG | 0.597499 | 8.3:-3935561 | MS.gene073338:intron |
| CAGTACTGAGTATATTTGGA+TGG | 0.598102 | 8.3:+3935563 | None:intergenic |
| CAGCCTAAGCTGATTGCATG+TGG | 0.600231 | 8.3:-3935862 | MS.gene073338:CDS |
| CCGGTTAGATTTGAAGCTCG+TGG | 0.602636 | 8.3:+3937156 | None:intergenic |
| AAAGCATAGGATTTGGAGGA+GGG | 0.604256 | 8.3:+3936851 | None:intergenic |
| AGAACATGAGTCCTAGACAA+AGG | 0.609263 | 8.3:-3936378 | MS.gene073338:CDS |
| CAGAAGAAGATGGACTTGGA+AGG | 0.618184 | 8.3:-3936313 | MS.gene073338:CDS |
| AAGAAGATGGACTTGGAAGG+AGG | 0.619267 | 8.3:-3936310 | MS.gene073338:CDS |
| TTGCAGGCTGCACTTCCCCA+AGG | 0.623512 | 8.3:-3935622 | MS.gene073338:intron |
| TGATTTCTCAGGAAATCTCA+TGG | 0.626161 | 8.3:-3937463 | MS.gene073338:CDS |
| CTTGTAGAACCAGAAAGCAT+AGG | 0.628500 | 8.3:+3936838 | None:intergenic |
| ACAAGTACCTAGACTGAACA+TGG | 0.632685 | 8.3:+3935974 | None:intergenic |
| GGTGAGTTGTTCAATAATGG+TGG | 0.635458 | 8.3:-3936880 | MS.gene073338:CDS |
| TCAAGAGAACCAACTCCAAG+AGG | 0.636626 | 8.3:-3937108 | MS.gene073338:CDS |
| TTCTATGCAATCTTCCAAAG+GGG | 0.639413 | 8.3:-3936977 | MS.gene073338:CDS |
| AGATGGTAAACTTCATGTTG+TGG | 0.647519 | 8.3:-3937247 | MS.gene073338:CDS |
| GTGCTTCACCTATTTCCGAA+GGG | 0.647728 | 8.3:-3936726 | MS.gene073338:CDS |
| AAGAAGAAAGATAGCATGGG+TGG | 0.662615 | 8.3:-3936805 | MS.gene073338:CDS |
| TGGTAATGGACCTAATAACA+AGG | 0.666402 | 8.3:-3936776 | MS.gene073338:CDS |
| ACAAAGAAGAAAGATAGCAT+GGG | 0.672441 | 8.3:-3936808 | MS.gene073338:CDS |
| TTGAGGATGCATAAGAAGAG+GGG | 0.674550 | 8.3:-3936919 | MS.gene073338:CDS |
| CTTCCAAAGGGGCTACTCCG+AGG | 0.679359 | 8.3:-3936966 | MS.gene073338:CDS |
| AACAGAATATATCTCAACAC+CGG | 0.682527 | 8.3:+3937137 | None:intergenic |
| CTTGTCATAACACTTGCTGG+AGG | 0.701230 | 8.3:+3936259 | None:intergenic |
| AAAGCGCCGAGTCCAAAACA+CGG | 0.735141 | 8.3:-3937042 | MS.gene073338:CDS |
| ACAAAGGGAACAATACCTTG+GGG | 0.771870 | 8.3:+3935607 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAATACTAAAAAAGAATT+TGG | - | chr8.3:3937768-3937787 | MS.gene073338:CDS | 15.0% |
| !!! | AATGTTTAATTTTAATTTGC+AGG | - | chr8.3:3937588-3937607 | MS.gene073338:CDS | 15.0% |
| !!! | TAATAGATTGAAGATTTTTT+TGG | + | chr8.3:3937107-3937126 | None:intergenic | 15.0% |
| !!! | TGAAAGTTGATATATTTATA+GGG | + | chr8.3:3936716-3936735 | None:intergenic | 15.0% |
| !!! | TTGAAAGTTGATATATTTAT+AGG | + | chr8.3:3936717-3936736 | None:intergenic | 15.0% |
| !! | AATAAGCAACTAATTAGAAT+AGG | + | chr8.3:3937560-3937579 | None:intergenic | 20.0% |
| !! | AATTAAGCCAAAAATTTCTT+AGG | + | chr8.3:3937298-3937317 | None:intergenic | 20.0% |
| !! | ATAAAATGGAAAGATAGTAA+TGG | + | chr8.3:3935539-3935558 | None:intergenic | 20.0% |
| !! | ATAAGCAACTAATTAGAATA+GGG | + | chr8.3:3937559-3937578 | None:intergenic | 20.0% |
| !!! | ACAAATAGTTTTCAAAGTAA+TGG | - | chr8.3:3936211-3936230 | MS.gene073338:CDS | 20.0% |
| !!! | ATAATCATTTTTGAATATGC+AGG | - | chr8.3:3937325-3937344 | MS.gene073338:CDS | 20.0% |
| !!! | ATATTCTCCTAAGAAATTTT+TGG | - | chr8.3:3937288-3937307 | MS.gene073338:CDS | 20.0% |
| ! | AAATGGTAATTCATAGCATA+AGG | + | chr8.3:3935575-3935594 | None:intergenic | 25.0% |
| ! | AATATCATAGCAACATATAG+TGG | + | chr8.3:3935431-3935450 | None:intergenic | 25.0% |
| ! | GATCATTGGAAGATATAAAA+TGG | + | chr8.3:3935553-3935572 | None:intergenic | 25.0% |
| ! | TAAGCAACTAATTAGAATAG+GGG | + | chr8.3:3937558-3937577 | None:intergenic | 25.0% |
| ! | TGGCGTCATATTATTTAAAT+GGG | + | chr8.3:3936053-3936072 | None:intergenic | 25.0% |
| ! | TTCTTAGGAGAATATAATGT+TGG | + | chr8.3:3937283-3937302 | None:intergenic | 25.0% |
| !! | AGTTTTCAAAGTAATGGTAA+TGG | - | chr8.3:3936217-3936236 | MS.gene073338:CDS | 25.0% |
| !! | ATTTTCATGTGGAACATATT+TGG | + | chr8.3:3936584-3936603 | None:intergenic | 25.0% |
| !! | TTTAATACCTTTTGATGCAA+CGG | + | chr8.3:3936608-3936627 | None:intergenic | 25.0% |
| !!! | ACATAGTAGAGTATTGTTAT+GGG | + | chr8.3:3937836-3937855 | None:intergenic | 25.0% |
| !!! | TTGAAGATTTTTTTGGAGAT+TGG | + | chr8.3:3937100-3937119 | None:intergenic | 25.0% |
| AACAGAATATATCTCAACAC+CGG | + | chr8.3:3936092-3936111 | None:intergenic | 30.0% | |
| AACATCGTATATATCCTTAC+CGG | + | chr8.3:3935393-3935412 | None:intergenic | 30.0% | |
| AAGATCAACTACTAACTCTA+TGG | - | chr8.3:3936006-3936025 | MS.gene073338:CDS | 30.0% | |
| AATTTGGTATTTGTGTTGCA+GGG | - | chr8.3:3937784-3937803 | MS.gene073338:CDS | 30.0% | |
| ACAAAGAAGAAAGATAGCAT+GGG | - | chr8.3:3936418-3936437 | MS.gene073338:intron | 30.0% | |
| ACATGGCATAAAAATCAGTT+TGG | + | chr8.3:3936156-3936175 | None:intergenic | 30.0% | |
| ATAAGACTTGAGTAGGTATT+AGG | + | chr8.3:3937033-3937052 | None:intergenic | 30.0% | |
| ATATATTAGCCAGAAGAAGA+TGG | - | chr8.3:3936903-3936922 | MS.gene073338:CDS | 30.0% | |
| ATCCAAATATACTCAGTACT+GGG | - | chr8.3:3937665-3937684 | MS.gene073338:CDS | 30.0% | |
| ATTCATAGCATAAGGATCAT+TGG | + | chr8.3:3935567-3935586 | None:intergenic | 30.0% | |
| ATTCTATGCAATCTTCCAAA+GGG | - | chr8.3:3936248-3936267 | MS.gene073338:CDS | 30.0% | |
| ATTGCAAGTGATTAAGTATG+TGG | - | chr8.3:3937739-3937758 | MS.gene073338:CDS | 30.0% | |
| CATACATAGCTCTTAAAAGA+GGG | + | chr8.3:3935742-3935761 | None:intergenic | 30.0% | |
| CTTCAAAAAGTAGTTATCCT+TGG | - | chr8.3:3935611-3935630 | MS.gene073338:CDS | 30.0% | |
| GAAATGCCATCTATTGTAAA+AGG | - | chr8.3:3937191-3937210 | MS.gene073338:CDS | 30.0% | |
| GTGGCGTCATATTATTTAAA+TGG | + | chr8.3:3936054-3936073 | None:intergenic | 30.0% | |
| GTTGCTATGATATTAGCATA+CGG | - | chr8.3:3935437-3935456 | MS.gene073338:intron | 30.0% | |
| TATTCTATGCAATCTTCCAA+AGG | - | chr8.3:3936247-3936266 | MS.gene073338:CDS | 30.0% | |
| TATTCTTTGGCAAACACAAA+GGG | + | chr8.3:3937637-3937656 | None:intergenic | 30.0% | |
| TTTATACCAGAACATTGATC+TGG | + | chr8.3:3935491-3935510 | None:intergenic | 30.0% | |
| TTTGGTCTCTTGTATCATTT+AGG | - | chr8.3:3937061-3937080 | MS.gene073338:CDS | 30.0% | |
| ! | AAAACCAAGATAGTCTTGAT+TGG | - | chr8.3:3935663-3935682 | MS.gene073338:intron | 30.0% |
| ! | AATACCTACTCAAGTCTTAT+AGG | - | chr8.3:3937033-3937052 | MS.gene073338:CDS | 30.0% |
| ! | ATCTTCTTCTGGCTAATATA+TGG | + | chr8.3:3936904-3936923 | None:intergenic | 30.0% |
| ! | ATGGAACCTTTTACAATAGA+TGG | + | chr8.3:3937200-3937219 | None:intergenic | 30.0% |
| ! | TTGTTCTGCAAAGTGTTATT+TGG | - | chr8.3:3935795-3935814 | MS.gene073338:CDS | 30.0% |
| !! | CACATAGTAGAGTATTGTTA+TGG | + | chr8.3:3937837-3937856 | None:intergenic | 30.0% |
| AAGTCCTATAAGACTTGAGT+AGG | + | chr8.3:3937040-3937059 | None:intergenic | 35.0% | |
| ACAAAGGGATGTTGAAATTG+AGG | - | chr8.3:3936864-3936883 | MS.gene073338:CDS | 35.0% | |
| ACGCTAGATTATATAGAACG+AGG | + | chr8.3:3936677-3936696 | None:intergenic | 35.0% | |
| ACTACTAACTCTATGGTATC+TGG | - | chr8.3:3936013-3936032 | MS.gene073338:CDS | 35.0% | |
| AGATCATGTACAAGATTGCA+CGG | + | chr8.3:3936773-3936792 | None:intergenic | 35.0% | |
| AGATGGTAAACTTCATGTTG+TGG | - | chr8.3:3935979-3935998 | MS.gene073338:intron | 35.0% | |
| AGTGGTGAGTTGTTCAATAA+TGG | - | chr8.3:3936343-3936362 | MS.gene073338:CDS | 35.0% | |
| ATACTCTACTATGTGCTTCT+TGG | - | chr8.3:3937842-3937861 | MS.gene073338:CDS | 35.0% | |
| ATGCACATCATTAGCAGTTA+AGG | + | chr8.3:3937153-3937172 | None:intergenic | 35.0% | |
| ATTCCCATAACAAGTGTGTT+AGG | + | chr8.3:3935719-3935738 | None:intergenic | 35.0% | |
| ATTGAGGATGCATAAGAAGA+GGG | - | chr8.3:3936306-3936325 | MS.gene073338:CDS | 35.0% | |
| ATTTCAACATCCCTTTGTCT+AGG | + | chr8.3:3936862-3936881 | None:intergenic | 35.0% | |
| ATTTCAGCATCAGTTTGAAG+TGG | + | chr8.3:3935953-3935972 | None:intergenic | 35.0% | |
| ATTTCGAAGATGAGACATTG+AGG | - | chr8.3:3936290-3936309 | MS.gene073338:CDS | 35.0% | |
| CACAAAGAAGAAAGATAGCA+TGG | - | chr8.3:3936417-3936436 | MS.gene073338:intron | 35.0% | |
| CAGTTAAGGATTCATGATCA+AGG | + | chr8.3:3937139-3937158 | None:intergenic | 35.0% | |
| CATCCAAATATACTCAGTAC+TGG | - | chr8.3:3937664-3937683 | MS.gene073338:CDS | 35.0% | |
| CCATACATAGCTCTTAAAAG+AGG | + | chr8.3:3935743-3935762 | None:intergenic | 35.0% | |
| CTTACATGTTGCAATTGTTC+AGG | - | chr8.3:3937483-3937502 | MS.gene073338:CDS | 35.0% | |
| CTTCAAACTGATGCTGAAAT+AGG | - | chr8.3:3935953-3935972 | MS.gene073338:intron | 35.0% | |
| GAAAATACCGTTGCATCAAA+AGG | - | chr8.3:3936598-3936617 | MS.gene073338:intron | 35.0% | |
| GAATTTGGTATTTGTGTTGC+AGG | - | chr8.3:3937783-3937802 | MS.gene073338:CDS | 35.0% | |
| GTATTCTTTGGCAAACACAA+AGG | + | chr8.3:3937638-3937657 | None:intergenic | 35.0% | |
| TAGTCCAATCAAGACTATCT+TGG | + | chr8.3:3935670-3935689 | None:intergenic | 35.0% | |
| TCATGTGGAACATATTTGGA+AGG | + | chr8.3:3936580-3936599 | None:intergenic | 35.0% | |
| TCTTCGAAATTTGAAGACCT+CGG | + | chr8.3:3936280-3936299 | None:intergenic | 35.0% | |
| TGATTTCTCAGGAAATCTCA+TGG | - | chr8.3:3935763-3935782 | MS.gene073338:CDS | 35.0% | |
| TGGATGGAGATTGTATTCTT+TGG | + | chr8.3:3937650-3937669 | None:intergenic | 35.0% | |
| TGGTTAAAACTAGATCCTCT+TGG | + | chr8.3:3936136-3936155 | None:intergenic | 35.0% | |
| TGTGTTAGGAAGAGTTGAAA+GGG | + | chr8.3:3935705-3935724 | None:intergenic | 35.0% | |
| TTAAGATTCCCTTCGGAAAT+AGG | + | chr8.3:3936511-3936530 | None:intergenic | 35.0% | |
| TTCTATGCAATCTTCCAAAG+GGG | - | chr8.3:3936249-3936268 | MS.gene073338:CDS | 35.0% | |
| TTGTGTTGCAGGGTTATATT+TGG | - | chr8.3:3937794-3937813 | MS.gene073338:CDS | 35.0% | |
| ! | ACGAGTTGCAACATTTTCTA+TGG | - | chr8.3:3937390-3937409 | MS.gene073338:CDS | 35.0% |
| ! | CAACATTTTCTATGGCTGTA+AGG | - | chr8.3:3937398-3937417 | MS.gene073338:CDS | 35.0% |
| ! | CAAGTCTTATAGGACTTGTT+TGG | - | chr8.3:3937043-3937062 | MS.gene073338:CDS | 35.0% |
| ! | CAGTACTGAGTATATTTGGA+TGG | + | chr8.3:3937666-3937685 | None:intergenic | 35.0% |
| ! | CTATTTGTGTATCCGTGTTT+TGG | + | chr8.3:3936199-3936218 | None:intergenic | 35.0% |
| ! | GTTTTCTCCAAACCATGATA+AGG | + | chr8.3:3936999-3937018 | None:intergenic | 35.0% |
| ! | TCTTCCTAACACACTTGTTA+TGG | - | chr8.3:3935712-3935731 | MS.gene073338:intron | 35.0% |
| ! | TGCATGTTTAAGATTCCCTT+CGG | + | chr8.3:3936518-3936537 | None:intergenic | 35.0% |
| !! | ATGTGCAACTCCTTGTTATT+AGG | + | chr8.3:3936463-3936482 | None:intergenic | 35.0% |
| !! | CCTCTTTTAAGAGCTATGTA+TGG | - | chr8.3:3935740-3935759 | MS.gene073338:intron | 35.0% |
| !! | CTTCCTAACACACTTGTTAT+GGG | - | chr8.3:3935713-3935732 | MS.gene073338:intron | 35.0% |
| !! | TCCATATAAAAAGAGCACCA+AGG | + | chr8.3:3935631-3935650 | None:intergenic | 35.0% |
| !! | TGGTAATGGACCTAATAACA+AGG | - | chr8.3:3936450-3936469 | MS.gene073338:intron | 35.0% |
| !!! | AAAGCTGCTTCTACTGATTT+TGG | - | chr8.3:3936544-3936563 | MS.gene073338:intron | 35.0% |
| !!! | TCCTTGGTGCTCTTTTTATA+TGG | - | chr8.3:3935627-3935646 | MS.gene073338:intron | 35.0% |
| AAACTAGATCCTCTTGGAGT+TGG | + | chr8.3:3936130-3936149 | None:intergenic | 40.0% | |
| AAAGCATAGGATTTGGAGGA+GGG | + | chr8.3:3936378-3936397 | None:intergenic | 40.0% | |
| AAGAAGAAAGATAGCATGGG+TGG | - | chr8.3:3936421-3936440 | MS.gene073338:intron | 40.0% | |
| ACAAAGGGAACAATACCTTG+GGG | + | chr8.3:3937622-3937641 | None:intergenic | 40.0% | |
| ACAAGTACCTAGACTGAACA+TGG | + | chr8.3:3937255-3937274 | None:intergenic | 40.0% | |
| ACACAAAGGGAACAATACCT+TGG | + | chr8.3:3937624-3937643 | None:intergenic | 40.0% | |
| AGAACATGAGTCCTAGACAA+AGG | - | chr8.3:3936848-3936867 | MS.gene073338:CDS | 40.0% | |
| AGGAGTTGCACATGTTTGTT+TGG | - | chr8.3:3936470-3936489 | MS.gene073338:intron | 40.0% | |
| ATCTCAATACTGTCTGATGC+TGG | - | chr8.3:3937218-3937237 | MS.gene073338:CDS | 40.0% | |
| CACAAAGGGAACAATACCTT+GGG | + | chr8.3:3937623-3937642 | None:intergenic | 40.0% | |
| CATTGAGGATGCATAAGAAG+AGG | - | chr8.3:3936305-3936324 | MS.gene073338:CDS | 40.0% | |
| CTGCAAAAACAGCGACAAAA+CGG | + | chr8.3:3935514-3935533 | None:intergenic | 40.0% | |
| GAACATGAGTCCTAGACAAA+GGG | - | chr8.3:3936849-3936868 | MS.gene073338:CDS | 40.0% | |
| GACAAGACTCATCCTTATCA+TGG | - | chr8.3:3936984-3937003 | MS.gene073338:CDS | 40.0% | |
| GACTCATCCTTATCATGGTT+TGG | - | chr8.3:3936989-3937008 | MS.gene073338:CDS | 40.0% | |
| GATGCTGAAATAGGTGAAGA+TGG | - | chr8.3:3935962-3935981 | MS.gene073338:intron | 40.0% | |
| GCTATGTATGGTGATTTCTC+AGG | - | chr8.3:3935752-3935771 | MS.gene073338:CDS | 40.0% | |
| GGTGAGTTGTTCAATAATGG+TGG | - | chr8.3:3936346-3936365 | MS.gene073338:CDS | 40.0% | |
| GTGAATCAGCTGCTAAGAAA+TGG | + | chr8.3:3935592-3935611 | None:intergenic | 40.0% | |
| GTGTGTTAGGAAGAGTTGAA+AGG | + | chr8.3:3935706-3935725 | None:intergenic | 40.0% | |
| GTTATAGAAGCTGCAGTTTC+AGG | + | chr8.3:3935884-3935903 | None:intergenic | 40.0% | |
| TCAATAGCAATTGGTATGCG+TGG | - | chr8.3:3937454-3937473 | MS.gene073338:CDS | 40.0% | |
| TGAATATGCAGGTCTGTTCA+TGG | - | chr8.3:3937336-3937355 | MS.gene073338:CDS | 40.0% | |
| TTCACACCAGATCAATGTTC+TGG | - | chr8.3:3935482-3935501 | MS.gene073338:intron | 40.0% | |
| TTGAGGATGCATAAGAAGAG+GGG | - | chr8.3:3936307-3936326 | MS.gene073338:CDS | 40.0% | |
| TTTCCACATGCAATCAGCTT+AGG | + | chr8.3:3937370-3937389 | None:intergenic | 40.0% | |
| ! | ACGCATACCAATTGCTATTG+AGG | + | chr8.3:3937455-3937474 | None:intergenic | 40.0% |
| ! | AGCATCAGACAGTATTGAGA+TGG | + | chr8.3:3937219-3937238 | None:intergenic | 40.0% |
| ! | AGTCTTGTCATAACACTTGC+TGG | + | chr8.3:3936973-3936992 | None:intergenic | 40.0% |
| ! | CACCCAGTACTGAGTATATT+TGG | + | chr8.3:3937670-3937689 | None:intergenic | 40.0% |
| ! | CTTGTAGAACCAGAAAGCAT+AGG | + | chr8.3:3936391-3936410 | None:intergenic | 40.0% |
| ! | GAACCAGAAAGCATAGGATT+TGG | + | chr8.3:3936385-3936404 | None:intergenic | 40.0% |
| ! | GATGCAACGGTATTTTCATG+TGG | + | chr8.3:3936595-3936614 | None:intergenic | 40.0% |
| ! | TCTGACGTTGTTTCGCTTAA+TGG | - | chr8.3:3935920-3935939 | MS.gene073338:intron | 40.0% |
| AAGAAAGATAGCATGGGTGG+TGG | - | chr8.3:3936424-3936443 | MS.gene073338:intron | 45.0% | |
| AAGATTGCACGGACGTTTGA+CGG | + | chr8.3:3936762-3936781 | None:intergenic | 45.0% | |
| AGTGCTTCACCTATTTCCGA+AGG | - | chr8.3:3936499-3936518 | MS.gene073338:intron | 45.0% | |
| ATGGCTGTAAGGTTCTTGAC+CGG | - | chr8.3:3937409-3937428 | MS.gene073338:CDS | 45.0% | |
| CCACGAGCTTCAAATCTAAC+CGG | - | chr8.3:3936070-3936089 | MS.gene073338:intron | 45.0% | |
| CCTCCAAATCCTATGCTTTC+TGG | - | chr8.3:3936379-3936398 | MS.gene073338:CDS | 45.0% | |
| CTAATGATGTGCATGCATGC+AGG | - | chr8.3:3937159-3937178 | MS.gene073338:CDS | 45.0% | |
| CTTCCAAGTCCATCTTCTTC+TGG | + | chr8.3:3936915-3936934 | None:intergenic | 45.0% | |
| GTGCTTCACCTATTTCCGAA+GGG | - | chr8.3:3936500-3936519 | MS.gene073338:intron | 45.0% | |
| TAGCATACGGTTCAGTTCGT+TGG | - | chr8.3:3935450-3935469 | MS.gene073338:intron | 45.0% | |
| TCAAGAGAACCAACTCCAAG+AGG | - | chr8.3:3936118-3936137 | MS.gene073338:intron | 45.0% | |
| ! | AAGAAGATGGACTTGGAAGG+AGG | - | chr8.3:3936916-3936935 | MS.gene073338:CDS | 45.0% |
| ! | ATACTGTCTGATGCTGGTCT+TGG | - | chr8.3:3937224-3937243 | MS.gene073338:CDS | 45.0% |
| ! | CAGAAGAAGATGGACTTGGA+AGG | - | chr8.3:3936913-3936932 | MS.gene073338:CDS | 45.0% |
| ! | CCAGAAAGCATAGGATTTGG+AGG | + | chr8.3:3936382-3936401 | None:intergenic | 45.0% |
| ! | CTTGTCATAACACTTGCTGG+AGG | + | chr8.3:3936970-3936989 | None:intergenic | 45.0% |
| ! | GAAAGCATAGGATTTGGAGG+AGG | + | chr8.3:3936379-3936398 | None:intergenic | 45.0% |
| ! | TAGCCAGAAGAAGATGGACT+TGG | - | chr8.3:3936909-3936928 | MS.gene073338:CDS | 45.0% |
| !! | ATGGGTGGTGGAAATGGTAA+TGG | - | chr8.3:3936436-3936455 | MS.gene073338:intron | 45.0% |
| !! | CGGCGCTTTACTTTGAAACA+TGG | + | chr8.3:3936173-3936192 | None:intergenic | 45.0% |
| !! | CTTTCTGGTTCTACAAGTGC+TGG | - | chr8.3:3936394-3936413 | MS.gene073338:CDS | 45.0% |
| !! | GTGTATCCGTGTTTTGGACT+CGG | + | chr8.3:3936193-3936212 | None:intergenic | 45.0% |
| AGGATGCATAAGAAGAGGGG+AGG | - | chr8.3:3936310-3936329 | MS.gene073338:CDS | 50.0% | |
| CAGCCTAAGCTGATTGCATG+TGG | - | chr8.3:3937364-3937383 | MS.gene073338:CDS | 50.0% | |
| CATACGGTTCAGTTCGTTGG+TGG | - | chr8.3:3935453-3935472 | MS.gene073338:intron | 50.0% | |
| GCGGCAACCTCAATAGCAAT+TGG | - | chr8.3:3937445-3937464 | MS.gene073338:CDS | 50.0% | |
| GGAATGGCCATGTTCAGTCT+AGG | - | chr8.3:3937245-3937264 | MS.gene073338:CDS | 50.0% | |
| GGATGCATAAGAAGAGGGGA+GGG | - | chr8.3:3936311-3936330 | MS.gene073338:CDS | 50.0% | |
| ! | AAGATGGACTTGGAAGGAGG+AGG | - | chr8.3:3936919-3936938 | MS.gene073338:CDS | 50.0% |
| ! | AGATGGACTTGGAAGGAGGA+GGG | - | chr8.3:3936920-3936939 | MS.gene073338:CDS | 50.0% |
| ! | CCGGTTAGATTTGAAGCTCG+TGG | + | chr8.3:3936073-3936092 | None:intergenic | 50.0% |
| !! | AAAGCGCCGAGTCCAAAACA+CGG | - | chr8.3:3936184-3936203 | MS.gene073338:CDS | 50.0% |
| !! | GATAGCATGGGTGGTGGAAA+TGG | - | chr8.3:3936430-3936449 | MS.gene073338:intron | 50.0% |
| !! | GTCTGATGCTGGTCTTGGAA+TGG | - | chr8.3:3937229-3937248 | MS.gene073338:CDS | 50.0% |
| TGCATAAGAAGAGGGGAGGG+AGG | - | chr8.3:3936314-3936333 | MS.gene073338:CDS | 55.0% | |
| ! | GATGGACTTGGAAGGAGGAG+GGG | - | chr8.3:3936921-3936940 | MS.gene073338:CDS | 55.0% |
| AGACCTCGGAGTAGCCCCTT+TGG | + | chr8.3:3936266-3936285 | None:intergenic | 60.0% | |
| CTTCCAAAGGGGCTACTCCG+AGG | - | chr8.3:3936260-3936279 | MS.gene073338:CDS | 60.0% | |
| GACCGGTCCAGCTGTGATTG+CGG | - | chr8.3:3937426-3937445 | MS.gene073338:CDS | 60.0% | |
| GAGGTTGCCGCAATCACAGC+TGG | + | chr8.3:3937436-3937455 | None:intergenic | 60.0% | |
| TGCCGCAATCACAGCTGGAC+CGG | + | chr8.3:3937431-3937450 | None:intergenic | 60.0% | |
| TTGCAGGCTGCACTTCCCCA+AGG | - | chr8.3:3937604-3937623 | MS.gene073338:CDS | 60.0% | |
| ! | AGGGGAGGGAGGAGTATGAG+TGG | - | chr8.3:3936325-3936344 | MS.gene073338:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 3935383 | 3937865 | 3935383 | ID=MS.gene073338 |
| chr8.3 | mRNA | 3935383 | 3937865 | 3935383 | ID=MS.gene073338.t1;Parent=MS.gene073338 |
| chr8.3 | exon | 3936629 | 3937865 | 3936629 | ID=MS.gene073338.t1.exon1;Parent=MS.gene073338.t1 |
| chr8.3 | CDS | 3936629 | 3937865 | 3936629 | ID=cds.MS.gene073338.t1;Parent=MS.gene073338.t1 |
| chr8.3 | exon | 3936166 | 3936418 | 3936166 | ID=MS.gene073338.t1.exon2;Parent=MS.gene073338.t1 |
| chr8.3 | CDS | 3936166 | 3936418 | 3936166 | ID=cds.MS.gene073338.t1;Parent=MS.gene073338.t1 |
| chr8.3 | exon | 3935982 | 3936067 | 3935982 | ID=MS.gene073338.t1.exon3;Parent=MS.gene073338.t1 |
| chr8.3 | CDS | 3935982 | 3936067 | 3935982 | ID=cds.MS.gene073338.t1;Parent=MS.gene073338.t1 |
| chr8.3 | exon | 3935744 | 3935901 | 3935744 | ID=MS.gene073338.t1.exon4;Parent=MS.gene073338.t1 |
| chr8.3 | CDS | 3935744 | 3935901 | 3935744 | ID=cds.MS.gene073338.t1;Parent=MS.gene073338.t1 |
| chr8.3 | exon | 3935562 | 3935638 | 3935562 | ID=MS.gene073338.t1.exon5;Parent=MS.gene073338.t1 |
| chr8.3 | CDS | 3935562 | 3935638 | 3935562 | ID=cds.MS.gene073338.t1;Parent=MS.gene073338.t1 |
| chr8.3 | exon | 3935383 | 3935443 | 3935383 | ID=MS.gene073338.t1.exon6;Parent=MS.gene073338.t1 |
| chr8.3 | CDS | 3935383 | 3935443 | 3935383 | ID=cds.MS.gene073338.t1;Parent=MS.gene073338.t1 |
| Gene Sequence |
| Protein sequence |
