Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073798.t1 | KEH42298.1 | 98.3 | 417 | 0 | 1 | 1 | 410 | 1 | 417 | 3.80E-228 | 800.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073798.t1 | Q9LZ03 | 76.3 | 427 | 84 | 3 | 1 | 410 | 1 | 427 | 1.5e-180 | 633.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073798.t1 | A0A072VLK1 | 98.3 | 417 | 0 | 1 | 1 | 410 | 1 | 417 | 2.8e-228 | 800.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058827 | MS.gene073798 | 0.804426 | 2.17E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63906 | MS.gene073798 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073798.t1 | MTR_1g067040 | 98.321 | 417 | 0 | 1 | 1 | 410 | 1 | 417 | 0.0 | 835 |
| MS.gene073798.t1 | MTR_5g095090 | 36.620 | 284 | 172 | 3 | 130 | 405 | 91 | 374 | 2.64e-64 | 211 |
| MS.gene073798.t1 | MTR_5g095040 | 38.182 | 275 | 162 | 3 | 139 | 405 | 99 | 373 | 1.30e-61 | 204 |
| MS.gene073798.t1 | MTR_5g084590 | 40.214 | 281 | 148 | 4 | 98 | 366 | 2 | 274 | 3.85e-59 | 194 |
| MS.gene073798.t1 | MTR_5g009990 | 32.507 | 363 | 218 | 10 | 69 | 410 | 26 | 382 | 7.54e-59 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073798.t1 | AT5G02820 | 82.039 | 412 | 58 | 2 | 15 | 410 | 16 | 427 | 0.0 | 691 |
| MS.gene073798.t1 | AT3G13170 | 39.172 | 314 | 174 | 5 | 108 | 407 | 48 | 358 | 1.54e-67 | 219 |
| MS.gene073798.t1 | AT1G63990 | 32.927 | 328 | 199 | 8 | 98 | 410 | 62 | 383 | 3.29e-58 | 195 |
| MS.gene073798.t1 | AT3G13170 | 38.418 | 177 | 102 | 2 | 138 | 307 | 81 | 257 | 1.07e-34 | 129 |
| MS.gene073798.t1 | AT3G13170 | 38.418 | 177 | 102 | 2 | 138 | 307 | 81 | 257 | 1.07e-34 | 129 |
| MS.gene073798.t1 | AT1G63990 | 32.536 | 209 | 126 | 4 | 98 | 291 | 62 | 270 | 3.35e-33 | 125 |
Find 129 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAAGATTCTATCGGTTTA+TGG | 0.162339 | 1.3:-46993051 | MS.gene073798:CDS |
| ATTCACCAGCTTTGTCTTAA+AGG | 0.180816 | 1.3:-46994698 | MS.gene073798:CDS |
| TCCCCAACTCGGTCAATATT+TGG | 0.241069 | 1.3:+46993282 | None:intergenic |
| TATGATTGACTGCACCAAAA+TGG | 0.272841 | 1.3:-46993328 | MS.gene073798:CDS |
| CGCCAAATATTGACCGAGTT+GGG | 0.274322 | 1.3:-46993284 | MS.gene073798:CDS |
| ACCCCTAGCCACTTAATATC+AGG | 0.295988 | 1.3:+46992982 | None:intergenic |
| GTGAGAGTTCGTCGAGGGTT+AGG | 0.311404 | 1.3:+46994981 | None:intergenic |
| TTCGTCGAGGGTTAGGGTTT+TGG | 0.320168 | 1.3:+46994988 | None:intergenic |
| AGGGGTTAGGCCTAGTGATT+TGG | 0.323299 | 1.3:-46992965 | MS.gene073798:CDS |
| TTCACCAGCTTTGTCTTAAA+GGG | 0.328026 | 1.3:-46994697 | MS.gene073798:CDS |
| GATGCAATCTGACACGGTTC+TGG | 0.342688 | 1.3:-46993454 | MS.gene073798:CDS |
| GCCTCAACCGCATCTTCTTC+CGG | 0.342813 | 1.3:-46995013 | MS.gene073798:CDS |
| TGAAGATTCTATCGGTTTAT+GGG | 0.352505 | 1.3:-46993050 | MS.gene073798:CDS |
| CACTCTATCCTCTCCGGTAA+TGG | 0.363607 | 1.3:-46994875 | MS.gene073798:CDS |
| ATGATTGACTGCACCAAAAT+GGG | 0.363708 | 1.3:-46993327 | MS.gene073798:CDS |
| ATACAGGCTTTGAGCACCTT+TGG | 0.376431 | 1.3:-46992790 | MS.gene073798:CDS |
| AGAACAATCCGGTCAAGTTC+AGG | 0.393447 | 1.3:+46994803 | None:intergenic |
| AACGTTGTTGCGGCGGAGAA+AGG | 0.397049 | 1.3:-46993390 | MS.gene073798:CDS |
| ATTCTATCGGTTTATGGGTG+TGG | 0.398853 | 1.3:-46993045 | MS.gene073798:CDS |
| ATATGAGGTTGGCTGAAGAT+AGG | 0.402619 | 1.3:-46993209 | MS.gene073798:CDS |
| GCGGAGAAAGGGGTGGTTGT+AGG | 0.404802 | 1.3:-46993378 | MS.gene073798:CDS |
| ATATTAAGTGGCTAGGGGTT+AGG | 0.407669 | 1.3:-46992978 | MS.gene073798:CDS |
| GCCCTTGAAATTGCAGCAGC+AGG | 0.412922 | 1.3:-46992740 | MS.gene073798:CDS |
| CGCGCTGTTCATTCTCTTGG+TGG | 0.418172 | 1.3:-46993247 | MS.gene073798:CDS |
| ATCGAATGCGAATCCATTAC+CGG | 0.421565 | 1.3:+46994862 | None:intergenic |
| TAAGCAGAAGGCTGAGATAC+AGG | 0.422038 | 1.3:-46992806 | MS.gene073798:CDS |
| CCCCTGATATTAAGTGGCTA+GGG | 0.427834 | 1.3:-46992984 | MS.gene073798:CDS |
| GATGATGTTTCATGCATGTT+GGG | 0.430048 | 1.3:-46993432 | MS.gene073798:CDS |
| TGACGCGCTGTTCATTCTCT+TGG | 0.432884 | 1.3:-46993250 | MS.gene073798:CDS |
| TTAATATCCTGCTCGGTCAT+TGG | 0.435275 | 1.3:+46992910 | None:intergenic |
| TTTGAGGATTTCGAGGATGA+TGG | 0.438355 | 1.3:+46995045 | None:intergenic |
| ATCCTGCTGCTGCAATTTCA+AGG | 0.438402 | 1.3:+46992738 | None:intergenic |
| ACAAGATACCGGAGCAGTGC+AGG | 0.440945 | 1.3:-46992936 | MS.gene073798:CDS |
| CTGAAGATAGGTTCTACAAC+AGG | 0.441386 | 1.3:-46993197 | MS.gene073798:CDS |
| ATTTCGAGGATGATGGAGTC+TGG | 0.442313 | 1.3:+46995052 | None:intergenic |
| TGAGAGTTCGTCGAGGGTTA+GGG | 0.445219 | 1.3:+46994982 | None:intergenic |
| TGCATAATCGTGACGGCGAA+GGG | 0.445491 | 1.3:-46993168 | MS.gene073798:CDS |
| CGCTACTTCGCGGCAGGTGA+AGG | 0.446632 | 1.3:+46994955 | None:intergenic |
| TGAAATTGCAGCAGCAGGAT+TGG | 0.447287 | 1.3:-46992735 | MS.gene073798:CDS |
| CTGTCCACAAGCGCGAGAAC+TGG | 0.451063 | 1.3:+46993087 | None:intergenic |
| ACGTTGTTGCGGCGGAGAAA+GGG | 0.457683 | 1.3:-46993389 | MS.gene073798:CDS |
| GGATGATGTTTCATGCATGT+TGG | 0.462768 | 1.3:-46993433 | MS.gene073798:CDS |
| AAGGGGAGGATTTCGTCGGT+TGG | 0.471794 | 1.3:+46995091 | None:intergenic |
| CGTGACGGCGAAGGGGCAGC+CGG | 0.474703 | 1.3:-46993160 | MS.gene073798:CDS |
| GTTCATTCTCTTGGTGGAGA+AGG | 0.477468 | 1.3:-46993241 | MS.gene073798:CDS |
| GACTGCACCAAAATGGGGAT+GGG | 0.480616 | 1.3:-46993321 | MS.gene073798:CDS |
| TTCTATCGGTTTATGGGTGT+GGG | 0.483982 | 1.3:-46993044 | MS.gene073798:CDS |
| AACAGCCTCGTCGAAACATC+CGG | 0.492221 | 1.3:+46993141 | None:intergenic |
| CCGCCAAATATTGACCGAGT+TGG | 0.497827 | 1.3:-46993285 | MS.gene073798:CDS |
| TTTATGTTCCTGAACTTGAC+CGG | 0.502463 | 1.3:-46994811 | MS.gene073798:CDS |
| ATTGGCAGCCTGCACTGCTC+CGG | 0.506556 | 1.3:+46992928 | None:intergenic |
| AGAAAGGGGTGGTTGTAGGA+AGG | 0.507310 | 1.3:-46993374 | MS.gene073798:CDS |
| GTGCATAATCGTGACGGCGA+AGG | 0.509150 | 1.3:-46993169 | MS.gene073798:CDS |
| TGACTACCCCTGATATTAAG+TGG | 0.511737 | 1.3:-46992990 | MS.gene073798:CDS |
| GAAGAATCCTGGTTGGGTTG+AGG | 0.514047 | 1.3:-46992851 | MS.gene073798:CDS |
| GTTGCCAGTTCTCGCGCTTG+TGG | 0.515247 | 1.3:-46993091 | MS.gene073798:CDS |
| TCCGGAAGAAGATGCGGTTG+AGG | 0.516716 | 1.3:+46995012 | None:intergenic |
| TGTGAAGAAGAATCCTGGTT+GGG | 0.517615 | 1.3:-46992857 | MS.gene073798:CDS |
| GATAGAATCTTCAATCCGTA+AGG | 0.520930 | 1.3:+46993060 | None:intergenic |
| ATCGCTCACTCTATCCTCTC+CGG | 0.521976 | 1.3:-46994881 | MS.gene073798:CDS |
| ACCGAGCAGGATATTAAGAC+TGG | 0.522752 | 1.3:-46992904 | MS.gene073798:CDS |
| CTGCACCAAAATGGGGATGG+GGG | 0.528605 | 1.3:-46993319 | MS.gene073798:CDS |
| GGTTGAGGAACTGACATTGA+TGG | 0.530389 | 1.3:-46992836 | MS.gene073798:CDS |
| AGATTCGATGTTGGATTGAA+CGG | 0.532226 | 1.3:+46994916 | None:intergenic |
| GTTGGATTGAACGGAGGAGA+GGG | 0.532797 | 1.3:+46994925 | None:intergenic |
| ACTGCACCAAAATGGGGATG+GGG | 0.534550 | 1.3:-46993320 | MS.gene073798:CDS |
| GAGATCCGCTACTTCGCGGC+AGG | 0.537627 | 1.3:+46994949 | None:intergenic |
| ACAGTCCCAATATTCGCAAA+AGG | 0.539022 | 1.3:+46994758 | None:intergenic |
| CCCCTAGCCACTTAATATCA+GGG | 0.540293 | 1.3:+46992983 | None:intergenic |
| TTTCGTCGGTTGGTTCTGTA+CGG | 0.542337 | 1.3:+46995101 | None:intergenic |
| GTCAGTTCCTCAACCCAACC+AGG | 0.542735 | 1.3:+46992844 | None:intergenic |
| GCCAAATATTGACCGAGTTG+GGG | 0.543406 | 1.3:-46993283 | MS.gene073798:CDS |
| ACCCCTGATATTAAGTGGCT+AGG | 0.544777 | 1.3:-46992985 | MS.gene073798:CDS |
| TCCAGTCTTAATATCCTGCT+CGG | 0.544847 | 1.3:+46992903 | None:intergenic |
| CTTCACCTGCCGCGAAGTAG+CGG | 0.551439 | 1.3:-46994954 | MS.gene073798:CDS |
| GTTCTTGAGGAAGATGAAGA+TGG | 0.552392 | 1.3:-46993121 | MS.gene073798:CDS |
| CGTTGTTGCGGCGGAGAAAG+GGG | 0.554658 | 1.3:-46993388 | MS.gene073798:CDS |
| TTACGGATTGAAGATTCTAT+CGG | 0.556435 | 1.3:-46993058 | MS.gene073798:CDS |
| ACTTGACCGGATTGTTCTCA+AGG | 0.558777 | 1.3:-46994798 | MS.gene073798:CDS |
| TTCAAGCCTCAACGTTGTTG+CGG | 0.559251 | 1.3:-46993400 | MS.gene073798:CDS |
| TGACTGCACCAAAATGGGGA+TGG | 0.560734 | 1.3:-46993322 | MS.gene073798:CDS |
| GAGAACGAGAGATTCGATGT+TGG | 0.561893 | 1.3:+46994907 | None:intergenic |
| CAGGCTGCCAATGACCGAGC+AGG | 0.563038 | 1.3:-46992917 | MS.gene073798:CDS |
| ATTTATCCTTGAGAACAATC+CGG | 0.564200 | 1.3:+46994792 | None:intergenic |
| TTTCGACGAGGCTGTTCTTG+AGG | 0.565518 | 1.3:-46993134 | MS.gene073798:CDS |
| TTTGAAGGGGAGGATTTCGT+CGG | 0.567861 | 1.3:+46995087 | None:intergenic |
| GGACGCAGCTTATATGAGGT+TGG | 0.568577 | 1.3:-46993220 | MS.gene073798:CDS |
| GGGAGAGATCCGCTACTTCG+CGG | 0.569666 | 1.3:+46994945 | None:intergenic |
| CACTCTGCATATCCCCAACT+CGG | 0.576207 | 1.3:+46993271 | None:intergenic |
| GACTGGAAAGGACATGTTGG+AGG | 0.576800 | 1.3:-46992887 | MS.gene073798:CDS |
| AAGCCTCAACGTTGTTGCGG+CGG | 0.580936 | 1.3:-46993397 | MS.gene073798:CDS |
| GCTACTTCGCGGCAGGTGAA+GGG | 0.581561 | 1.3:+46994956 | None:intergenic |
| TAAGACTGGAAAGGACATGT+TGG | 0.584721 | 1.3:-46992890 | MS.gene073798:CDS |
| TCCTGCTGCTGCAATTTCAA+GGG | 0.584774 | 1.3:+46992739 | None:intergenic |
| TCTCCGCCGCAACAACGTTG+AGG | 0.587650 | 1.3:+46993394 | None:intergenic |
| GGAAAACTGCTATTACTGCT+AGG | 0.589287 | 1.3:-46994733 | MS.gene073798:CDS |
| AGAAGGACGCAGCTTATATG+AGG | 0.592803 | 1.3:-46993224 | MS.gene073798:CDS |
| GAATCCCTTTAAGACAAAGC+TGG | 0.595380 | 1.3:+46994693 | None:intergenic |
| AATATTCGCAAAAGGACGGA+TGG | 0.601224 | 1.3:+46994766 | None:intergenic |
| AGAGAGATATTGAAAACCAA+AGG | 0.602952 | 1.3:+46992774 | None:intergenic |
| TCCCAATATTCGCAAAAGGA+CGG | 0.603167 | 1.3:+46994762 | None:intergenic |
| TTGTACTTGTCCAAATCACT+AGG | 0.606074 | 1.3:+46992955 | None:intergenic |
| TTTGGTTCCGGAAGAAGATG+CGG | 0.606729 | 1.3:+46995006 | None:intergenic |
| TTGTGAAGAAGAATCCTGGT+TGG | 0.609900 | 1.3:-46992858 | MS.gene073798:CDS |
| TTTGGACAAGTACAAGATAC+CGG | 0.609938 | 1.3:-46992947 | MS.gene073798:CDS |
| TGTTGCGGCGGAGAAAGGGG+TGG | 0.611276 | 1.3:-46993385 | MS.gene073798:CDS |
| TGCACCAAAATGGGGATGGG+GGG | 0.611378 | 1.3:-46993318 | MS.gene073798:CDS |
| CTTGTGGACAGTGACCCTTA+CGG | 0.618260 | 1.3:-46993075 | MS.gene073798:CDS |
| TGTTGGATTGAACGGAGGAG+AGG | 0.618769 | 1.3:+46994924 | None:intergenic |
| CCAACTCGGTCAATATTTGG+CGG | 0.623363 | 1.3:+46993285 | None:intergenic |
| GATGGTTAAGACTAAGCAGA+AGG | 0.623914 | 1.3:-46992818 | MS.gene073798:CDS |
| CGTCGGTTGGTTCTGTACGG+CGG | 0.630343 | 1.3:+46995104 | None:intergenic |
| CCCTAGCCACTTAATATCAG+GGG | 0.633916 | 1.3:+46992984 | None:intergenic |
| GCAGGATATTAAGACTGGAA+AGG | 0.636659 | 1.3:-46992899 | MS.gene073798:CDS |
| GGGAAGTGAGAGTTCGTCGA+GGG | 0.637315 | 1.3:+46994976 | None:intergenic |
| CCCTGATATTAAGTGGCTAG+GGG | 0.641428 | 1.3:-46992983 | MS.gene073798:CDS |
| TTCGCCGTCACGATTATGCA+CGG | 0.646868 | 1.3:+46993171 | None:intergenic |
| GAATCAGATGCAATCTGACA+CGG | 0.649433 | 1.3:-46993460 | MS.gene073798:intron |
| TTCGATGTTGGATTGAACGG+AGG | 0.651484 | 1.3:+46994919 | None:intergenic |
| TTGCGAATATTGGGACTGTG+AGG | 0.654886 | 1.3:-46994754 | MS.gene073798:CDS |
| ATAGAATCTTCAATCCGTAA+GGG | 0.661174 | 1.3:+46993061 | None:intergenic |
| GCATAATCGTGACGGCGAAG+GGG | 0.662282 | 1.3:-46993167 | MS.gene073798:CDS |
| ATGCGAATCCATTACCGGAG+AGG | 0.684861 | 1.3:+46994867 | None:intergenic |
| TGATTGACTGCACCAAAATG+GGG | 0.696978 | 1.3:-46993326 | MS.gene073798:CDS |
| TGATTCGCAGCAGAACGAGA+CGG | 0.697199 | 1.3:+46994836 | None:intergenic |
| GTTTCCGTGCATAATCGTGA+CGG | 0.698991 | 1.3:-46993175 | MS.gene073798:CDS |
| AGTCAAGTGAGAGCTATCGT+AGG | 0.701267 | 1.3:+46993008 | None:intergenic |
| GGCAGCCGGATGTTTCGACG+AGG | 0.739177 | 1.3:-46993146 | MS.gene073798:CDS |
| AGGGAAGTGAGAGTTCGTCG+AGG | 0.743719 | 1.3:+46994975 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTACATAAATATATGTT+TGG | - | chr1.3:46993698-46993717 | MS.gene073798:intron | 10.0% |
| !! | TTTAAATTTAGTATTACTTT+GGG | - | chr1.3:46993251-46993270 | MS.gene073798:CDS | 10.0% |
| !!! | GATATAAAAAGTTTTTTTTT+TGG | + | chr1.3:46993841-46993860 | None:intergenic | 10.0% |
| !!! | TTATTATGATTTTATTTTGT+TGG | - | chr1.3:46994297-46994316 | MS.gene073798:intron | 10.0% |
| !!! | TTTTAAATTTAGTATTACTT+TGG | - | chr1.3:46993250-46993269 | MS.gene073798:CDS | 10.0% |
| !! | TACTAGATAAAATGAAAATT+AGG | - | chr1.3:46993603-46993622 | MS.gene073798:intron | 15.0% |
| !! | TTAAAAGTTGTTGTATATAT+AGG | + | chr1.3:46993813-46993832 | None:intergenic | 15.0% |
| !!! | ATTTTAACAAAAAAAACTGA+GGG | - | chr1.3:46994148-46994167 | MS.gene073798:intron | 15.0% |
| !!! | ATTTTTAACAAGGATAATTT+AGG | - | chr1.3:46994125-46994144 | MS.gene073798:intron | 15.0% |
| !!! | TTTGATTTGATATTATATGA+TGG | - | chr1.3:46993353-46993372 | MS.gene073798:CDS | 15.0% |
| !! | AAAATGAAAATTAGGTACTT+AGG | - | chr1.3:46993611-46993630 | MS.gene073798:intron | 20.0% |
| !! | AAATGAAAATTAGGTACTTA+GGG | - | chr1.3:46993612-46993631 | MS.gene073798:intron | 20.0% |
| !! | CCAATGATAATTTAAGAAAA+TGG | - | chr1.3:46993436-46993455 | MS.gene073798:CDS | 20.0% |
| !! | CTTGTTAAAAATAACTTACT+AGG | + | chr1.3:46994117-46994136 | None:intergenic | 20.0% |
| !!! | AAGAGAAACATGTTTTTAAA+AGG | + | chr1.3:46993768-46993787 | None:intergenic | 20.0% |
| !!! | CCATTTTCTTAAATTATCAT+TGG | + | chr1.3:46993439-46993458 | None:intergenic | 20.0% |
| !!! | CTAGTAAGTTATTTTTAACA+AGG | - | chr1.3:46994115-46994134 | MS.gene073798:intron | 20.0% |
| !!! | GAAGACATTTAAAGTTATTT+AGG | + | chr1.3:46994335-46994354 | None:intergenic | 20.0% |
| !!! | GATTTTAACAAAAAAAACTG+AGG | - | chr1.3:46994147-46994166 | MS.gene073798:intron | 20.0% |
| ! | AAACTGAACGAAATTGAAAA+CGG | - | chr1.3:46994079-46994098 | MS.gene073798:intron | 25.0% |
| ! | AATTGAACATTGCAATTAGT+GGG | - | chr1.3:46993887-46993906 | MS.gene073798:intron | 25.0% |
| ! | AGATTCACAATTAAATTCAG+TGG | + | chr1.3:46994010-46994029 | None:intergenic | 25.0% |
| ! | AGTGAGATATTTGATGAAAT+AGG | - | chr1.3:46994234-46994253 | MS.gene073798:intron | 25.0% |
| ! | TAATTGAACATTGCAATTAG+TGG | - | chr1.3:46993886-46993905 | MS.gene073798:intron | 25.0% |
| !! | ATATATGTTTGGTTCAAAAG+TGG | - | chr1.3:46993709-46993728 | MS.gene073798:intron | 25.0% |
| !!! | GATATTATATGATGGATGAT+TGG | - | chr1.3:46993361-46993380 | MS.gene073798:CDS | 25.0% |
| AGAGAGATATTGAAAACCAA+AGG | + | chr1.3:46995082-46995101 | None:intergenic | 30.0% | |
| ATAGAATCTTCAATCCGTAA+GGG | + | chr1.3:46994795-46994814 | None:intergenic | 30.0% | |
| ATTTATCCTTGAGAACAATC+CGG | + | chr1.3:46993064-46993083 | None:intergenic | 30.0% | |
| GAGTAAATAGTTTCATAGTC+TGG | + | chr1.3:46993326-46993345 | None:intergenic | 30.0% | |
| ! | AGTATTACTTTGGGTTTGTT+TGG | - | chr1.3:46993260-46993279 | MS.gene073798:CDS | 30.0% |
| ! | TTACGGATTGAAGATTCTAT+CGG | - | chr1.3:46994795-46994814 | MS.gene073798:CDS | 30.0% |
| !! | AATATCTCACTTTTCATCCT+AGG | + | chr1.3:46994225-46994244 | None:intergenic | 30.0% |
| !! | TATATGATGGATGATTGGTT+GGG | - | chr1.3:46993366-46993385 | MS.gene073798:CDS | 30.0% |
| !! | TCACCTTTGATTTGAAATGT+CGG | - | chr1.3:46993563-46993582 | MS.gene073798:intron | 30.0% |
| !! | TGAAGATTCTATCGGTTTAT+GGG | - | chr1.3:46994803-46994822 | MS.gene073798:CDS | 30.0% |
| !! | TTATATGATGGATGATTGGT+TGG | - | chr1.3:46993365-46993384 | MS.gene073798:CDS | 30.0% |
| !! | TTGAAGATTCTATCGGTTTA+TGG | - | chr1.3:46994802-46994821 | MS.gene073798:CDS | 30.0% |
| !!! | GGTTTGAGTTTGTTTTTGAA+GGG | + | chr1.3:46992783-46992802 | None:intergenic | 30.0% |
| !!! | GTTTGAGTTTGTTTTTGAAG+GGG | + | chr1.3:46992782-46992801 | None:intergenic | 30.0% |
| !!! | TGGTTTGAGTTTGTTTTTGA+AGG | + | chr1.3:46992784-46992803 | None:intergenic | 30.0% |
| AGATTCGATGTTGGATTGAA+CGG | + | chr1.3:46992940-46992959 | None:intergenic | 35.0% | |
| ATGATTGACTGCACCAAAAT+GGG | - | chr1.3:46994526-46994545 | MS.gene073798:intron | 35.0% | |
| GAAAATTAGGTACTTAGGGT+CGG | - | chr1.3:46993616-46993635 | MS.gene073798:intron | 35.0% | |
| GATAGAATCTTCAATCCGTA+AGG | + | chr1.3:46994796-46994815 | None:intergenic | 35.0% | |
| GATGATGTTTCATGCATGTT+GGG | - | chr1.3:46994421-46994440 | MS.gene073798:intron | 35.0% | |
| TATGATTGACTGCACCAAAA+TGG | - | chr1.3:46994525-46994544 | MS.gene073798:intron | 35.0% | |
| TGAACGAAATTGAAAACGGT+GGG | - | chr1.3:46994083-46994102 | MS.gene073798:intron | 35.0% | |
| TGTAAGAGACATCAATGGAT+GGG | - | chr1.3:46993935-46993954 | MS.gene073798:intron | 35.0% | |
| TGTTCAATACTGACACAGTT+TGG | - | chr1.3:46993531-46993550 | MS.gene073798:intron | 35.0% | |
| TTGTACTTGTCCAAATCACT+AGG | + | chr1.3:46994901-46994920 | None:intergenic | 35.0% | |
| TTTATGTTCCTGAACTTGAC+CGG | - | chr1.3:46993042-46993061 | MS.gene073798:CDS | 35.0% | |
| TTTCTTGTAAATCACGACGA+AGG | - | chr1.3:46994042-46994061 | MS.gene073798:intron | 35.0% | |
| TTTGGACAAGTACAAGATAC+CGG | - | chr1.3:46994906-46994925 | MS.gene073798:CDS | 35.0% | |
| ! | AGATTTTAAATGGAGGGGAA+GGG | - | chr1.3:46993664-46993683 | MS.gene073798:intron | 35.0% |
| ! | ATTCACCAGCTTTGTCTTAA+AGG | - | chr1.3:46993155-46993174 | MS.gene073798:CDS | 35.0% |
| ! | GATTTTGTGAAGAAGAATCC+TGG | - | chr1.3:46994991-46995010 | MS.gene073798:CDS | 35.0% |
| ! | GTTTGGTTCAAAAGTGGATA+GGG | - | chr1.3:46993715-46993734 | MS.gene073798:intron | 35.0% |
| ! | TGTTTGGTTCAAAAGTGGAT+AGG | - | chr1.3:46993714-46993733 | MS.gene073798:intron | 35.0% |
| ! | TTCACCAGCTTTGTCTTAAA+GGG | - | chr1.3:46993156-46993175 | MS.gene073798:CDS | 35.0% |
| ! | TTTGAAATGTCGGTGCTTAA+TGG | - | chr1.3:46993573-46993592 | MS.gene073798:intron | 35.0% |
| ! | TTTGGTTCAAAAGTGGATAG+GGG | - | chr1.3:46993716-46993735 | MS.gene073798:intron | 35.0% |
| !! | ACTTTGGGTTTGTTTGGTTT+TGG | - | chr1.3:46993266-46993285 | MS.gene073798:CDS | 35.0% |
| !! | AGGTTGATTTTCAGTGACAA+TGG | - | chr1.3:46994499-46994518 | MS.gene073798:intron | 35.0% |
| !! | TTAGGTTTTTGAGGATTTCG+AGG | + | chr1.3:46992818-46992837 | None:intergenic | 35.0% |
| !!! | TTGAGGCTTTTAGGTTTTTG+AGG | + | chr1.3:46992827-46992846 | None:intergenic | 35.0% |
| AATATTCGCAAAAGGACGGA+TGG | + | chr1.3:46993090-46993109 | None:intergenic | 40.0% | |
| ACAAGAACAAAACCTGATCC+TGG | + | chr1.3:46993229-46993248 | None:intergenic | 40.0% | |
| ACAGTCCCAATATTCGCAAA+AGG | + | chr1.3:46993098-46993117 | None:intergenic | 40.0% | |
| ATATTAAGTGGCTAGGGGTT+AGG | - | chr1.3:46994875-46994894 | MS.gene073798:CDS | 40.0% | |
| ATCGAATGCGAATCCATTAC+CGG | + | chr1.3:46992994-46993013 | None:intergenic | 40.0% | |
| CTGAACGAAATTGAAAACGG+TGG | - | chr1.3:46994082-46994101 | MS.gene073798:intron | 40.0% | |
| CTGAAGATAGGTTCTACAAC+AGG | - | chr1.3:46994656-46994675 | MS.gene073798:intron | 40.0% | |
| CTGTAAGAGACATCAATGGA+TGG | - | chr1.3:46993934-46993953 | MS.gene073798:intron | 40.0% | |
| GAACGAAATTGAAAACGGTG+GGG | - | chr1.3:46994084-46994103 | MS.gene073798:intron | 40.0% | |
| GAATCAGATGCAATCTGACA+CGG | - | chr1.3:46994393-46994412 | MS.gene073798:intron | 40.0% | |
| GATGGTTAAGACTAAGCAGA+AGG | - | chr1.3:46995035-46995054 | MS.gene073798:CDS | 40.0% | |
| GCAGGATATTAAGACTGGAA+AGG | - | chr1.3:46994954-46994973 | MS.gene073798:CDS | 40.0% | |
| GGAAAACTGCTATTACTGCT+AGG | - | chr1.3:46993120-46993139 | MS.gene073798:CDS | 40.0% | |
| GGATGATGTTTCATGCATGT+TGG | - | chr1.3:46994420-46994439 | MS.gene073798:intron | 40.0% | |
| GTAAGAGACATCAATGGATG+GGG | - | chr1.3:46993936-46993955 | MS.gene073798:intron | 40.0% | |
| GTTCTTGAGGAAGATGAAGA+TGG | - | chr1.3:46994732-46994751 | MS.gene073798:CDS | 40.0% | |
| GTTGCTGTAAGAGACATCAA+TGG | - | chr1.3:46993930-46993949 | MS.gene073798:intron | 40.0% | |
| TAAGACTGGAAAGGACATGT+TGG | - | chr1.3:46994963-46994982 | MS.gene073798:CDS | 40.0% | |
| TACTGACACAGTTTGGACAT+CGG | - | chr1.3:46993538-46993557 | MS.gene073798:intron | 40.0% | |
| TACTGATGTTAAGCTCTTCC+AGG | - | chr1.3:46993208-46993227 | MS.gene073798:CDS | 40.0% | |
| TCCAGTCTTAATATCCTGCT+CGG | + | chr1.3:46994953-46994972 | None:intergenic | 40.0% | |
| TCCCAATATTCGCAAAAGGA+CGG | + | chr1.3:46993094-46993113 | None:intergenic | 40.0% | |
| TGACTACCCCTGATATTAAG+TGG | - | chr1.3:46994863-46994882 | MS.gene073798:CDS | 40.0% | |
| TGATTGACTGCACCAAAATG+GGG | - | chr1.3:46994527-46994546 | MS.gene073798:intron | 40.0% | |
| TGTCTCCATAGACCATTACA+TGG | + | chr1.3:46993971-46993990 | None:intergenic | 40.0% | |
| TGTGAAGAAGAATCCTGGTT+GGG | - | chr1.3:46994996-46995015 | MS.gene073798:CDS | 40.0% | |
| TTAATATCCTGCTCGGTCAT+TGG | + | chr1.3:46994946-46994965 | None:intergenic | 40.0% | |
| TTGTGAAGAAGAATCCTGGT+TGG | - | chr1.3:46994995-46995014 | MS.gene073798:CDS | 40.0% | |
| TTTGAGGATTTCGAGGATGA+TGG | + | chr1.3:46992811-46992830 | None:intergenic | 40.0% | |
| ! | ATATGAGGTTGGCTGAAGAT+AGG | - | chr1.3:46994644-46994663 | MS.gene073798:intron | 40.0% |
| ! | ATCCGTCCTTTTGCGAATAT+TGG | - | chr1.3:46993089-46993108 | MS.gene073798:CDS | 40.0% |
| ! | GAGATTTTAAATGGAGGGGA+AGG | - | chr1.3:46993663-46993682 | MS.gene073798:intron | 40.0% |
| ! | GATTTTAAATGGAGGGGAAG+GGG | - | chr1.3:46993665-46993684 | MS.gene073798:intron | 40.0% |
| ! | GCACCGACATTTCAAATCAA+AGG | + | chr1.3:46993569-46993588 | None:intergenic | 40.0% |
| ! | TCCGTCCTTTTGCGAATATT+GGG | - | chr1.3:46993090-46993109 | MS.gene073798:CDS | 40.0% |
| !! | ATTCTATCGGTTTATGGGTG+TGG | - | chr1.3:46994808-46994827 | MS.gene073798:CDS | 40.0% |
| !! | GAATCCCTTTAAGACAAAGC+TGG | + | chr1.3:46993163-46993182 | None:intergenic | 40.0% |
| !! | TGAGGGTAAACCTACTTTTG+TGG | - | chr1.3:46994165-46994184 | MS.gene073798:intron | 40.0% |
| !! | TTCTATCGGTTTATGGGTGT+GGG | - | chr1.3:46994809-46994828 | MS.gene073798:CDS | 40.0% |
| !!! | TGAGTTTGTTTTTGAAGGGG+AGG | + | chr1.3:46992779-46992798 | None:intergenic | 40.0% |
| ACCCCTAGCCACTTAATATC+AGG | + | chr1.3:46994874-46994893 | None:intergenic | 45.0% | |
| ACCCCTGATATTAAGTGGCT+AGG | - | chr1.3:46994868-46994887 | MS.gene073798:CDS | 45.0% | |
| ACCGAGCAGGATATTAAGAC+TGG | - | chr1.3:46994949-46994968 | MS.gene073798:CDS | 45.0% | |
| ACTTGACCGGATTGTTCTCA+AGG | - | chr1.3:46993055-46993074 | MS.gene073798:CDS | 45.0% | |
| AGAACAATCCGGTCAAGTTC+AGG | + | chr1.3:46993053-46993072 | None:intergenic | 45.0% | |
| AGAAGGACGCAGCTTATATG+AGG | - | chr1.3:46994629-46994648 | MS.gene073798:intron | 45.0% | |
| AGTCAAGTGAGAGCTATCGT+AGG | + | chr1.3:46994848-46994867 | None:intergenic | 45.0% | |
| ATCCTGCTGCTGCAATTTCA+AGG | + | chr1.3:46995118-46995137 | None:intergenic | 45.0% | |
| CAGTGCCATGTAATGGTCTA+TGG | - | chr1.3:46993963-46993982 | MS.gene073798:intron | 45.0% | |
| CCAACTCGGTCAATATTTGG+CGG | + | chr1.3:46994571-46994590 | None:intergenic | 45.0% | |
| CCCCTAGCCACTTAATATCA+GGG | + | chr1.3:46994873-46994892 | None:intergenic | 45.0% | |
| CCCCTGATATTAAGTGGCTA+GGG | - | chr1.3:46994869-46994888 | MS.gene073798:CDS | 45.0% | |
| CCCTAGCCACTTAATATCAG+GGG | + | chr1.3:46994872-46994891 | None:intergenic | 45.0% | |
| CCCTGATATTAAGTGGCTAG+GGG | - | chr1.3:46994870-46994889 | MS.gene073798:CDS | 45.0% | |
| CGCCAAATATTGACCGAGTT+GGG | - | chr1.3:46994569-46994588 | MS.gene073798:intron | 45.0% | |
| GAGAACGAGAGATTCGATGT+TGG | + | chr1.3:46992949-46992968 | None:intergenic | 45.0% | |
| GCCAAATATTGACCGAGTTG+GGG | - | chr1.3:46994570-46994589 | MS.gene073798:intron | 45.0% | |
| GGTTGAGGAACTGACATTGA+TGG | - | chr1.3:46995017-46995036 | MS.gene073798:CDS | 45.0% | |
| GTCTCTTACAGCAACTTCCT+TGG | + | chr1.3:46993925-46993944 | None:intergenic | 45.0% | |
| GTGGGTTTAGTGTCATACCA+AGG | - | chr1.3:46993905-46993924 | MS.gene073798:intron | 45.0% | |
| GTTCAAAAGTGGATAGGGGA+GGG | - | chr1.3:46993720-46993739 | MS.gene073798:intron | 45.0% | |
| GTTCATTCTCTTGGTGGAGA+AGG | - | chr1.3:46994612-46994631 | MS.gene073798:intron | 45.0% | |
| GTTTCCGTGCATAATCGTGA+CGG | - | chr1.3:46994678-46994697 | MS.gene073798:CDS | 45.0% | |
| TAAGCAGAAGGCTGAGATAC+AGG | - | chr1.3:46995047-46995066 | MS.gene073798:CDS | 45.0% | |
| TCCCCAACTCGGTCAATATT+TGG | + | chr1.3:46994574-46994593 | None:intergenic | 45.0% | |
| TCCTGCTGCTGCAATTTCAA+GGG | + | chr1.3:46995117-46995136 | None:intergenic | 45.0% | |
| TGAAATTGCAGCAGCAGGAT+TGG | - | chr1.3:46995118-46995137 | MS.gene073798:CDS | 45.0% | |
| TGTTAAGCTCTTCCAGGATC+AGG | - | chr1.3:46993214-46993233 | MS.gene073798:CDS | 45.0% | |
| TGTTCGACACCAACATGTGT+CGG | - | chr1.3:46993499-46993518 | MS.gene073798:intron | 45.0% | |
| TTAGGTACTTAGGGTCGGTT+TGG | - | chr1.3:46993621-46993640 | MS.gene073798:intron | 45.0% | |
| TTCAAAAGTGGATAGGGGAG+GGG | - | chr1.3:46993721-46993740 | MS.gene073798:intron | 45.0% | |
| TTCAAGCCTCAACGTTGTTG+CGG | - | chr1.3:46994453-46994472 | MS.gene073798:intron | 45.0% | |
| TTCGATGTTGGATTGAACGG+AGG | + | chr1.3:46992937-46992956 | None:intergenic | 45.0% | |
| TTGCGAATATTGGGACTGTG+AGG | - | chr1.3:46993099-46993118 | MS.gene073798:CDS | 45.0% | |
| TTTGAAGGGGAGGATTTCGT+CGG | + | chr1.3:46992769-46992788 | None:intergenic | 45.0% | |
| ! | AAGATGCGGTTGAGGCTTTT+AGG | + | chr1.3:46992836-46992855 | None:intergenic | 45.0% |
| ! | AGGGGGGAGATTTTAAATGG+AGG | - | chr1.3:46993657-46993676 | MS.gene073798:intron | 45.0% |
| ! | GGGGGAGATTTTAAATGGAG+GGG | - | chr1.3:46993659-46993678 | MS.gene073798:intron | 45.0% |
| ! | GGGGGGAGATTTTAAATGGA+GGG | - | chr1.3:46993658-46993677 | MS.gene073798:intron | 45.0% |
| ! | TTTGGTTCCGGAAGAAGATG+CGG | + | chr1.3:46992850-46992869 | None:intergenic | 45.0% |
| !! | ATACAGGCTTTGAGCACCTT+TGG | - | chr1.3:46995063-46995082 | MS.gene073798:CDS | 45.0% |
| !! | ATTTCGAGGATGATGGAGTC+TGG | + | chr1.3:46992804-46992823 | None:intergenic | 45.0% |
| !! | CACATAGTACCGACACATGT+TGG | + | chr1.3:46993511-46993530 | None:intergenic | 45.0% |
| !! | TTAGGGTCGGTTTGGTTCAA+TGG | - | chr1.3:46993629-46993648 | MS.gene073798:intron | 45.0% |
| !! | TTTCGTCGGTTGGTTCTGTA+CGG | + | chr1.3:46992755-46992774 | None:intergenic | 45.0% |
| AACAGCCTCGTCGAAACATC+CGG | + | chr1.3:46994715-46994734 | None:intergenic | 50.0% | |
| ACTGCACCAAAATGGGGATG+GGG | - | chr1.3:46994533-46994552 | MS.gene073798:intron | 50.0% | |
| AGAAAGGGGTGGTTGTAGGA+AGG | - | chr1.3:46994479-46994498 | MS.gene073798:intron | 50.0% | |
| AGGGGTTAGGCCTAGTGATT+TGG | - | chr1.3:46994888-46994907 | MS.gene073798:CDS | 50.0% | |
| ATCGCTCACTCTATCCTCTC+CGG | - | chr1.3:46992972-46992991 | MS.gene073798:CDS | 50.0% | |
| ATGCGAATCCATTACCGGAG+AGG | + | chr1.3:46992989-46993008 | None:intergenic | 50.0% | |
| CACTCTATCCTCTCCGGTAA+TGG | - | chr1.3:46992978-46992997 | MS.gene073798:CDS | 50.0% | |
| CACTCTGCATATCCCCAACT+CGG | + | chr1.3:46994585-46994604 | None:intergenic | 50.0% | |
| CCGCCAAATATTGACCGAGT+TGG | - | chr1.3:46994568-46994587 | MS.gene073798:intron | 50.0% | |
| CTTGTGGACAGTGACCCTTA+CGG | - | chr1.3:46994778-46994797 | MS.gene073798:CDS | 50.0% | |
| GACTGCACCAAAATGGGGAT+GGG | - | chr1.3:46994532-46994551 | MS.gene073798:intron | 50.0% | |
| GACTGGAAAGGACATGTTGG+AGG | - | chr1.3:46994966-46994985 | MS.gene073798:CDS | 50.0% | |
| GAGACATCAATGGATGGGGT+TGG | - | chr1.3:46993940-46993959 | MS.gene073798:intron | 50.0% | |
| GAGTGGCTGACCACAAAAGT+AGG | + | chr1.3:46994178-46994197 | None:intergenic | 50.0% | |
| GATGCAATCTGACACGGTTC+TGG | - | chr1.3:46994399-46994418 | MS.gene073798:intron | 50.0% | |
| GGACGCAGCTTATATGAGGT+TGG | - | chr1.3:46994633-46994652 | MS.gene073798:intron | 50.0% | |
| GGTTCAAAAGTGGATAGGGG+AGG | - | chr1.3:46993719-46993738 | MS.gene073798:intron | 50.0% | |
| GTTGGATTGAACGGAGGAGA+GGG | + | chr1.3:46992931-46992950 | None:intergenic | 50.0% | |
| TCATCCTAGGTAGTCGATCC+CGG | + | chr1.3:46994212-46994231 | None:intergenic | 50.0% | |
| TGACGCGCTGTTCATTCTCT+TGG | - | chr1.3:46994603-46994622 | MS.gene073798:intron | 50.0% | |
| TGACTGCACCAAAATGGGGA+TGG | - | chr1.3:46994531-46994550 | MS.gene073798:intron | 50.0% | |
| TGAGAGTTCGTCGAGGGTTA+GGG | + | chr1.3:46992874-46992893 | None:intergenic | 50.0% | |
| TGATTCGCAGCAGAACGAGA+CGG | + | chr1.3:46993020-46993039 | None:intergenic | 50.0% | |
| TGCATAATCGTGACGGCGAA+GGG | - | chr1.3:46994685-46994704 | MS.gene073798:CDS | 50.0% | |
| TGTTGGATTGAACGGAGGAG+AGG | + | chr1.3:46992932-46992951 | None:intergenic | 50.0% | |
| TTCGCCGTCACGATTATGCA+CGG | + | chr1.3:46994685-46994704 | None:intergenic | 50.0% | |
| TTTCGACGAGGCTGTTCTTG+AGG | - | chr1.3:46994719-46994738 | MS.gene073798:CDS | 50.0% | |
| ! | GAAGAATCCTGGTTGGGTTG+AGG | - | chr1.3:46995002-46995021 | MS.gene073798:CDS | 50.0% |
| ! | GGGAGGGGGGAGATTTTAAA+TGG | - | chr1.3:46993654-46993673 | MS.gene073798:intron | 50.0% |
| ! | GTTTGGTTCAATGGAGGGGA+GGG | - | chr1.3:46993638-46993657 | MS.gene073798:intron | 50.0% |
| ! | TTCGTCGAGGGTTAGGGTTT+TGG | + | chr1.3:46992868-46992887 | None:intergenic | 50.0% |
| ! | TTTGGTTCAATGGAGGGGAG+GGG | - | chr1.3:46993639-46993658 | MS.gene073798:intron | 50.0% |
| !! | GGTCGGTTTGGTTCAATGGA+GGG | - | chr1.3:46993633-46993652 | MS.gene073798:intron | 50.0% |
| !! | GTCGGTTTGGTTCAATGGAG+GGG | - | chr1.3:46993634-46993653 | MS.gene073798:intron | 50.0% |
| !!! | GAGGGTTAGGGTTTTGGTTC+CGG | + | chr1.3:46992862-46992881 | None:intergenic | 50.0% |
| AACGTTGTTGCGGCGGAGAA+AGG | - | chr1.3:46994463-46994482 | MS.gene073798:intron | 55.0% | |
| AAGCCTCAACGTTGTTGCGG+CGG | - | chr1.3:46994456-46994475 | MS.gene073798:intron | 55.0% | |
| AAGGGGAGGATTTCGTCGGT+TGG | + | chr1.3:46992765-46992784 | None:intergenic | 55.0% | |
| ACAAGATACCGGAGCAGTGC+AGG | - | chr1.3:46994917-46994936 | MS.gene073798:CDS | 55.0% | |
| ACGTTGTTGCGGCGGAGAAA+GGG | - | chr1.3:46994464-46994483 | MS.gene073798:intron | 55.0% | |
| AGGGAAGTGAGAGTTCGTCG+AGG | + | chr1.3:46992881-46992900 | None:intergenic | 55.0% | |
| CAAAATGGGGATGGGGGGAA+AGG | - | chr1.3:46994540-46994559 | MS.gene073798:intron | 55.0% | |
| CGCGCTGTTCATTCTCTTGG+TGG | - | chr1.3:46994606-46994625 | MS.gene073798:intron | 55.0% | |
| CTATCCGGGATCGACTACCT+AGG | - | chr1.3:46994205-46994224 | MS.gene073798:intron | 55.0% | |
| CTGCACCAAAATGGGGATGG+GGG | - | chr1.3:46994534-46994553 | MS.gene073798:intron | 55.0% | |
| GCATAATCGTGACGGCGAAG+GGG | - | chr1.3:46994686-46994705 | MS.gene073798:CDS | 55.0% | |
| GCCCTTGAAATTGCAGCAGC+AGG | - | chr1.3:46995113-46995132 | MS.gene073798:CDS | 55.0% | |
| GCCTCAACCGCATCTTCTTC+CGG | - | chr1.3:46992840-46992859 | MS.gene073798:CDS | 55.0% | |
| GGGAAGTGAGAGTTCGTCGA+GGG | + | chr1.3:46992880-46992899 | None:intergenic | 55.0% | |
| GTCAGTTCCTCAACCCAACC+AGG | + | chr1.3:46995012-46995031 | None:intergenic | 55.0% | |
| GTCGATCCCGGATAGTAGCA+CGG | + | chr1.3:46994200-46994219 | None:intergenic | 55.0% | |
| GTGAGAGTTCGTCGAGGGTT+AGG | + | chr1.3:46992875-46992894 | None:intergenic | 55.0% | |
| GTGCATAATCGTGACGGCGA+AGG | - | chr1.3:46994684-46994703 | MS.gene073798:CDS | 55.0% | |
| TCCGGAAGAAGATGCGGTTG+AGG | + | chr1.3:46992844-46992863 | None:intergenic | 55.0% | |
| TGCACCAAAATGGGGATGGG+GGG | - | chr1.3:46994535-46994554 | MS.gene073798:intron | 55.0% | |
| TTGGTTCAATGGAGGGGAGG+GGG | - | chr1.3:46993640-46993659 | MS.gene073798:intron | 55.0% | |
| ! | AGCCACTCCGTGCTACTATC+CGG | - | chr1.3:46994190-46994209 | MS.gene073798:intron | 55.0% |
| ! | CTTTCCCCCCATCCCCATTT+TGG | + | chr1.3:46994542-46994561 | None:intergenic | 55.0% |
| ! | GGGTTGGCAGTGCCATGTAA+TGG | - | chr1.3:46993956-46993975 | MS.gene073798:intron | 55.0% |
| ! | GGTTTGGTTCAATGGAGGGG+AGG | - | chr1.3:46993637-46993656 | MS.gene073798:intron | 55.0% |
| !! | GGGTCGGTTTGGTTCAATGG+AGG | - | chr1.3:46993632-46993651 | MS.gene073798:intron | 55.0% |
| ATTGGCAGCCTGCACTGCTC+CGG | + | chr1.3:46994928-46994947 | None:intergenic | 60.0% | |
| CGTTGTTGCGGCGGAGAAAG+GGG | - | chr1.3:46994465-46994484 | MS.gene073798:intron | 60.0% | |
| CTGTCCACAAGCGCGAGAAC+TGG | + | chr1.3:46994769-46994788 | None:intergenic | 60.0% | |
| CTTCACCTGCCGCGAAGTAG+CGG | - | chr1.3:46992899-46992918 | MS.gene073798:CDS | 60.0% | |
| GCGGAGAAAGGGGTGGTTGT+AGG | - | chr1.3:46994475-46994494 | MS.gene073798:intron | 60.0% | |
| GCTACTTCGCGGCAGGTGAA+GGG | + | chr1.3:46992900-46992919 | None:intergenic | 60.0% | |
| GGGAGAGATCCGCTACTTCG+CGG | + | chr1.3:46992911-46992930 | None:intergenic | 60.0% | |
| GTTGCCAGTTCTCGCGCTTG+TGG | - | chr1.3:46994762-46994781 | MS.gene073798:CDS | 60.0% | |
| TCCCGGATAGTAGCACGGAG+TGG | + | chr1.3:46994195-46994214 | None:intergenic | 60.0% | |
| TCTCCGCCGCAACAACGTTG+AGG | + | chr1.3:46994462-46994481 | None:intergenic | 60.0% | |
| TGGTTCAATGGAGGGGAGGG+GGG | - | chr1.3:46993641-46993660 | MS.gene073798:intron | 60.0% | |
| ! | GCCACTCCGTGCTACTATCC+GGG | - | chr1.3:46994191-46994210 | MS.gene073798:intron | 60.0% |
| !! | CGTCGGTTGGTTCTGTACGG+CGG | + | chr1.3:46992752-46992771 | None:intergenic | 60.0% |
| CAGGCTGCCAATGACCGAGC+AGG | - | chr1.3:46994936-46994955 | MS.gene073798:CDS | 65.0% | |
| CGCTACTTCGCGGCAGGTGA+AGG | + | chr1.3:46992901-46992920 | None:intergenic | 65.0% | |
| GAGATCCGCTACTTCGCGGC+AGG | + | chr1.3:46992907-46992926 | None:intergenic | 65.0% | |
| GGCAGCCGGATGTTTCGACG+AGG | - | chr1.3:46994707-46994726 | MS.gene073798:CDS | 65.0% | |
| TGTTGCGGCGGAGAAAGGGG+TGG | - | chr1.3:46994468-46994487 | MS.gene073798:intron | 65.0% | |
| CGTGACGGCGAAGGGGCAGC+CGG | - | chr1.3:46994693-46994712 | MS.gene073798:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 46992729 | 46995146 | 46992729 | ID=MS.gene073798 |
| chr1.3 | mRNA | 46992729 | 46995146 | 46992729 | ID=MS.gene073798.t1;Parent=MS.gene073798 |
| chr1.3 | exon | 46994661 | 46995146 | 46994661 | ID=MS.gene073798.t1.exon1;Parent=MS.gene073798.t1 |
| chr1.3 | CDS | 46994661 | 46995146 | 46994661 | ID=cds.MS.gene073798.t1;Parent=MS.gene073798.t1 |
| chr1.3 | exon | 46992729 | 46993475 | 46992729 | ID=MS.gene073798.t1.exon2;Parent=MS.gene073798.t1 |
| chr1.3 | CDS | 46992729 | 46993475 | 46992729 | ID=cds.MS.gene073798.t1;Parent=MS.gene073798.t1 |
| Gene Sequence |
| Protein sequence |
